# Created: Mon Mar 04 22:21:48 EST 2013 by cgaadm_deadline
# Job: 335640    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: GDAC_mergedClustering urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
# Parameters: 
#    mrnacnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661176/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt
#    mrnahc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COADREAD-TP/2661173/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt
#    mirnacnmf = 
#    mirnahc = 
#    copynumber = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2662198/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt
#    methlyationhc = 
#    methlyationcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661437/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt
#    mergedfile = COADREAD-TP
#    PredictionU133aTCGA = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661113/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt
#    PredictionU133aPhilips = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2661117/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt
#    PredictionUNCTCGA = 
#    mRNAseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661114/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt
#    mRNAseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2661111/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt
#    miRseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661124/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt
#    miRseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2661125/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt
