| GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2662145/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/LUSC-TP/2662146/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2664715/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2662363/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | LUSC-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2662126/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/2662130/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2662131/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/2662122/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2662142/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/2662140/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 18:20:39 04-03-13 |
| Completed: | |
| Elapsed: | 00 hrs 00 mins 46 secs |
step 1. GDAC_mergedClustering [id: 335170] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2662145/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/LUSC-TP/2662146/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| mirnacnmf | |
| mirnahc | |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2664715/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2662363/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| mergedfile | LUSC-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2662126/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/2662130/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2662131/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/2662122/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/2662142/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/2662140/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| Output Files: | |
| LUSC-TP.transferedmergedcluster.txt | |
| .lsf.out | |
| LUSC-TP.mergedcluster.txt | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 18:20:39 04-03-13 |
| Completed: | 18:20:55 04-03-13 |
| Elapsed: | 00 hrs 00 mins 15 secs |
step 2. GDAC_mergedReport [id: 335171]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | LUSC-TP.transferedmergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 18:20:40 04-03-13 |
| Completed: | 18:21:25 04-03-13 |
| Elapsed: | 00 hrs 00 mins 45 secs |