
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/335178/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/LUSC-TP/2666774/1.GDAC_mergedClustering.Finished/LUSC-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=LUSC-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=LUSC-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=376, in cluster file=358, common to both=358
[1]  79 358
[1] "Amp Peak  1(1p34.2) mutation analysis"
[1] 3
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           58                           300 
  AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE 
                           58                           300 
[1] "Amp Peak  2(1q21.2) mutation analysis"
[1] 3
  AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE 
                          186                           172 
  AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE 
                          186                           172 
[1] "Amp Peak  3(2p16.1) mutation analysis"
[1] 3
  AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE 
                          194                           164 
  AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE 
                          194                           164 
[1] "Amp Peak  4(2q31.2) mutation analysis"
[1] 3
  AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE 
                          121                           237 
  AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE 
                          121                           237 
[1] "Amp Peak  5(3p11.1) mutation analysis"
[1] 3
  AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE 
                           73                           285 
  AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE 
                           73                           285 
[1] "Amp Peak  6(3q26.33) mutation analysis"
[1] 3
  AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE 
                           330                             28 
  AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE 
                           330                             28 
[1] "Amp Peak  7(4q12) mutation analysis"
[1] 3
  AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE 
                         85                         273 
  AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE 
                         85                         273 
[1] "Amp Peak  8(5p15.33) mutation analysis"
[1] 3
  AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE 
                           281                             77 
  AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE 
                           281                             77 
[1] "Amp Peak  9(5p12) mutation analysis"
[1] 3
  AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE 
                        236                         122 
  AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE 
                        236                         122 
[1] "Amp Peak 10(6q12) mutation analysis"
[1] 3
  AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE 
                        107                         251 
  AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE 
                        107                         251 
[1] "Amp Peak 11(7p11.2) mutation analysis"
[1] 3
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          174                           184 
  AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE 
                          174                           184 
[1] "Amp Peak 12(7q21.2) mutation analysis"
[1] 3
  AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE 
                          188                           170 
  AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE 
                          188                           170 
[1] "Amp Peak 13(8p11.23) mutation analysis"
[1] 3
  AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE 
                           168                            190 
  AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE 
                           168                            190 
[1] "Amp Peak 14(8q24.21) mutation analysis"
[1] 3
  AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE 
                           248                            110 
  AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE 
                           248                            110 
[1] "Amp Peak 15(9p24.1) mutation analysis"
[1] 3
  AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE 
                           67                           291 
  AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE 
                           67                           291 
[1] "Amp Peak 16(9p13.3) mutation analysis"
[1] 3
  AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE 
                           98                           260 
  AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE 
                           98                           260 
[1] "Amp Peak 17(11q13.3) mutation analysis"
[1] 3
  AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE 
                           131                            227 
  AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE 
                           131                            227 
[1] "Amp Peak 18(12p13.33) mutation analysis"
[1] 3
  AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE 
                            177                             181 
  AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE 
                            177                             181 
[1] "Amp Peak 19(12q15) mutation analysis"
[1] 3
  AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE 
                         132                          226 
  AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE 
                         132                          226 
[1] "Amp Peak 20(13q34) mutation analysis"
[1] 3
  AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE 
                          64                          294 
  AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE 
                          64                          294 
[1] "Amp Peak 21(14q13.3) mutation analysis"
[1] 3
  AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE 
                           110                            248 
  AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE 
                           110                            248 
[1] "Amp Peak 22(15q26.3) mutation analysis"
[1] 3
  AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE 
                           128                            230 
  AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE 
                           128                            230 
[1] "Amp Peak 23(17q25.1) mutation analysis"
[1] 3
  AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE 
                           171                            187 
  AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE 
                           171                            187 
[1] "Amp Peak 24(18p11.32) mutation analysis"
[1] 3
  AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE 
                            122                             236 
  AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE 
                            122                             236 
[1] "Amp Peak 25(18q11.2) mutation analysis"
[1] 3
  AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE 
                           115                            243 
  AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE 
                           115                            243 
[1] "Amp Peak 26(19q12) mutation analysis"
[1] 3
  AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE 
                         149                          209 
  AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE 
                         149                          209 
[1] "Amp Peak 27(19q13.2) mutation analysis"
[1] 3
  AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE 
                           157                            201 
  AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE 
                           157                            201 
[1] "Amp Peak 28(20p12.2) mutation analysis"
[1] 3
  AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE 
                           193                            165 
  AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE 
                           193                            165 
[1] "Amp Peak 29(20q11.21) mutation analysis"
[1] 3
  AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE 
                            206                             152 
  AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE 
                            206                             152 
[1] "Amp Peak 30(22q11.21) mutation analysis"
[1] 3
  AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE 
                            177                             181 
  AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE 
                            177                             181 
[1] "Amp Peak 31(Xq28) mutation analysis"
[1] 3
  AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE 
                         92                         266 
  AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE 
                         92                         266 
[1] "Del Peak  1(1p36.32) mutation analysis"
[1] 3
  DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE 
                           155                            203 
  DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE 
                           155                            203 
[1] "Del Peak  2(1p13.2) mutation analysis"
[1] 3
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                          156                           202 
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                          156                           202 
[1] "Del Peak  3(2p25.3) mutation analysis"
[1] 3
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                           34                           324 
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                           34                           324 
[1] "Del Peak  4(2q22.1) mutation analysis"
[1] 3
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                           96                           262 
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                           96                           262 
[1] "Del Peak  5(2q36.2) mutation analysis"
[1] 3
  DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE 
                          116                           242 
  DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE 
                          116                           242 
[1] "Del Peak  6(3p25.3) mutation analysis"
[1] 3
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                          285                            73 
  DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE 
                          285                            73 
[1] "Del Peak  7(3p13) mutation analysis"
[1] 3
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                        310                          48 
  DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE 
                        310                          48 
[1] "Del Peak  8(3p12.1) mutation analysis"
[1] 3
  DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE 
                          280                            78 
  DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE 
                          280                            78 
[1] "Del Peak  9(4p15.31) mutation analysis"
[1] 3
  DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE 
                           219                            139 
  DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE 
                           219                            139 
[1] "Del Peak 10(4q22.1) mutation analysis"
[1] 3
  DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE 
                          199                           159 
  DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE 
                          199                           159 
[1] "Del Peak 11(4q32.3) mutation analysis"
[1] 3
  DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE 
                          226                           132 
  DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE 
                          226                           132 
[1] "Del Peak 12(4q35.2) mutation analysis"
[1] 3
  DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE 
                          229                           129 
  DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE 
                          229                           129 
[1] "Del Peak 13(5q11.2) mutation analysis"
[1] 3
  DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE 
                          265                            93 
  DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE 
                          265                            93 
[1] "Del Peak 14(5q31.1) mutation analysis"
[1] 3
  DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE 
                          277                            81 
  DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE 
                          277                            81 
[1] "Del Peak 15(6p25.3) mutation analysis"
[1] 3
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           90                           268 
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           90                           268 
[1] "Del Peak 16(6q26) mutation analysis"
[1] 3
  DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE 
                         93                         265 
  DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE 
                         93                         265 
[1] "Del Peak 17(7q11.22) mutation analysis"
[1] 3
  DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE 
                            35                            323 
  DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE 
                            35                            323 
[1] "Del Peak 18(7q36.1) mutation analysis"
[1] 3
  DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE 
                           73                           285 
  DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE 
                           73                           285 
[1] "Del Peak 19(8p23.2) mutation analysis"
[1] 3
  DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE 
                          243                           115 
  DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE 
                          243                           115 
[1] "Del Peak 20(9p23) mutation analysis"
[1] 3
  DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE 
                        234                         124 
  DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE 
                        234                         124 
[1] "Del Peak 21(9p21.3) mutation analysis"
[1] 3
  DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE 
                          272                            86 
  DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE 
                          272                            86 
[1] "Del Peak 22(9q21.11) mutation analysis"
[1] 3
  DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE 
                           174                            184 
  DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE 
                           174                            184 
[1] "Del Peak 23(10p15.3) mutation analysis"
[1] 3
  DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE 
                           160                            198 
  DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE 
                           160                            198 
[1] "Del Peak 24(10q23.31) mutation analysis"
[1] 3
  DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE 
                            184                             174 
  DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE 
                            184                             174 
[1] "Del Peak 25(11p15.5) mutation analysis"
[1] 3
  DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE 
                           173                            185 
  DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE 
                           173                            185 
[1] "Del Peak 26(11q22.1) mutation analysis"
[1] 3
  DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE 
                           108                            250 
  DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE 
                           108                            250 
[1] "Del Peak 27(11q25) mutation analysis"
[1] 3
  DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE 
                         131                          227 
  DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE 
                         131                          227 
[1] "Del Peak 28(12q24.31) mutation analysis"
[1] 3
  DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE 
                             57                             301 
  DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE 
                             57                             301 
[1] "Del Peak 29(13q12.11) mutation analysis"
[1] 3
  DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE 
                            240                             118 
  DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE 
                            240                             118 
[1] "Del Peak 30(13q14.2) mutation analysis"
[1] 3
  DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE 
                           251                            107 
  DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE 
                           251                            107 
[1] "Del Peak 31(14q11.2) mutation analysis"
[1] 3
  DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE 
                           130                            228 
  DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE 
                           130                            228 
[1] "Del Peak 32(15q12) mutation analysis"
[1] 3
  DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE 
                         122                          236 
  DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE 
                         122                          236 
[1] "Del Peak 33(16p13.3) mutation analysis"
[1] 3
  DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE 
                           129                            229 
  DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE 
                           129                            229 
[1] "Del Peak 34(16q23.1) mutation analysis"
[1] 3
  DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE 
                           144                            214 
  DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE 
                           144                            214 
[1] "Del Peak 35(17p11.2) mutation analysis"
[1] 3
  DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE 
                           185                            173 
  DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE 
                           185                            173 
[1] "Del Peak 36(17q11.2) mutation analysis"
[1] 3
  DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE 
                            89                            269 
  DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE 
                            89                            269 
[1] "Del Peak 37(17q25.3) mutation analysis"
[1] 3
  DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE 
                            68                            290 
  DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE 
                            68                            290 
[1] "Del Peak 38(18q23) mutation analysis"
[1] 3
  DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE 
                         164                          194 
  DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE 
                         164                          194 
[1] "Del Peak 39(19p13.3) mutation analysis"
[1] 3
  DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE 
                           163                            195 
  DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE 
                           163                            195 
[1] "Del Peak 40(19q13.33) mutation analysis"
[1] 3
  DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE 
                             96                             262 
  DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE 
                             96                             262 
[1] "Del Peak 41(19q13.43) mutation analysis"
[1] 3
  DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE 
                             96                             262 
  DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE 
                             96                             262 
[1] "Del Peak 42(21q11.2) mutation analysis"
[1] 3
  DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE 
                           176                            182 
  DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE 
                           176                            182 
[1] "Del Peak 43(21q22.3) mutation analysis"
[1] 3
  DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE 
                           205                            153 
  DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE 
                           205                            153 
[1] "Del Peak 44(22q11.21) mutation analysis"
[1] 3
  DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE 
                             62                             296 
  DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE 
                             62                             296 
[1] "Del Peak 45(Xp22.2) mutation analysis"
[1] 3
  DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE 
                          114                           244 
  DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE 
                          114                           244 
[1] "Del Peak 46(Xp21.1) mutation analysis"
[1] 3
  DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE 
                          118                           240 
  DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE 
                          118                           240 
[1] "Del Peak 47(Xp11.3) mutation analysis"
[1] 3
  DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE 
                          116                           242 
  DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE 
                          116                           242 
[1] "Del Peak 48(Xq22.3) mutation analysis"
[1] 3
  DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE 
                           91                           267 
  DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE 
                           91                           267 
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"             "MRNA_CHIERARCHICAL"    "CN_CNMF"              
 [4] "METHLYATION_CNMF"      "RPPA_CNMF"             "RPPA_CHIERARCHICAL"   
 [7] "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"          
[10] "MIRSEQ_CHIERARCHICAL" 

Input Data has 10 rows and 358 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'RPPA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "MRNA_CNMF"             "MRNA_CHIERARCHICAL"    "CN_CNMF"              
 [4] "METHLYATION_CNMF"      "RPPA_CNMF"             "RPPA_CHIERARCHICAL"   
 [7] "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"          
[10] "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 358 columns, 0 survival variables, and 10 non-survival variables.
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1p34.2) mutation analysis
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          13                            30
  CLUS_2                           7                            43
  CLUS_3                           2                            28
  CLUS_4                           9                            22
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           7                            21
  CLUS_2                           8                            46
  CLUS_3                          16                            56
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          17                           112
  CLUS_2                           9                           103
  CLUS_3                          32                            85
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          12                            78
  CLUS_2                           9                            66
  CLUS_3                          10                            49
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          11                            49
  CLUS_2                           9                            63
  CLUS_3                          13                            49
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                           7                            40
  CLUS_2                           7                            41
  CLUS_3                          13                            45
  CLUS_4                           6                            35
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          12                            48
  CLUS_2                          12                            68
  CLUS_3                          22                            57
  CLUS_4                           3                            35
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          20                            96
  CLUS_2                          14                            72
  CLUS_3                          15                            40
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          27                           116
  CLUS_2                          19                           131
  CLUS_3                           7                            31
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P34.2) MUTATED AMP PEAK  1(1P34.2) WILD-TYPE
  CLUS_1                          10                            40
  CLUS_2                          24                           149
  CLUS_3                          19                            89

Clustering(2) Variable = Amp Peak  2(1q21.2) mutation analysis
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          19                            24
  CLUS_2                          36                            14
  CLUS_3                          15                            15
  CLUS_4                          17                            14
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          18                            10
  CLUS_2                          38                            16
  CLUS_3                          31                            41
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          52                            77
  CLUS_2                          81                            31
  CLUS_3                          53                            64
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          35                            55
  CLUS_2                          50                            25
  CLUS_3                          27                            32
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          38                            22
  CLUS_2                          35                            37
  CLUS_3                          30                            32
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          24                            23
  CLUS_2                          23                            25
  CLUS_3                          39                            19
  CLUS_4                          17                            24
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          25                            35
  CLUS_2                          58                            22
  CLUS_3                          39                            40
  CLUS_4                          17                            21
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          49                            67
  CLUS_2                          60                            26
  CLUS_3                          30                            25
D2V9, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          79                            64
  CLUS_2                          71                            79
  CLUS_3                          22                            16
D2V10, multiclass
        clus
vv       AMP PEAK  2(1Q21.2) MUTATED AMP PEAK  2(1Q21.2) WILD-TYPE
  CLUS_1                          33                            17
  CLUS_2                          90                            83
  CLUS_3                          49                            59

Clustering(3) Variable = Amp Peak  3(2p16.1) mutation analysis
D3V1, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          19                            24
  CLUS_2                          40                            10
  CLUS_3                          12                            18
  CLUS_4                          15                            16
D3V2, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          10                            18
  CLUS_2                          40                            14
  CLUS_3                          36                            36
D3V3, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          48                            81
  CLUS_2                          86                            26
  CLUS_3                          60                            57
D3V4, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          41                            49
  CLUS_2                          56                            19
  CLUS_3                          25                            34
D3V5, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          33                            27
  CLUS_2                          38                            34
  CLUS_3                          33                            29
D3V6, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          27                            20
  CLUS_2                          27                            21
  CLUS_3                          31                            27
  CLUS_4                          19                            22
D3V7, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          23                            37
  CLUS_2                          58                            22
  CLUS_3                          44                            35
  CLUS_4                          17                            21
D3V8, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          53                            63
  CLUS_2                          61                            25
  CLUS_3                          28                            27
D3V9, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          81                            62
  CLUS_2                          82                            68
  CLUS_3                          20                            18
D3V10, multiclass
        clus
vv       AMP PEAK  3(2P16.1) MUTATED AMP PEAK  3(2P16.1) WILD-TYPE
  CLUS_1                          33                            17
  CLUS_2                          84                            89
  CLUS_3                          66                            42

Clustering(4) Variable = Amp Peak  4(2q31.2) mutation analysis
D4V1, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          11                            32
  CLUS_2                          27                            23
  CLUS_3                           8                            22
  CLUS_4                          11                            20
D4V2, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          12                            16
  CLUS_2                          29                            25
  CLUS_3                          16                            56
D4V3, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          29                           100
  CLUS_2                          55                            57
  CLUS_3                          37                            80
D4V4, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          26                            64
  CLUS_2                          42                            33
  CLUS_3                          10                            49
D4V5, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          22                            38
  CLUS_2                          22                            50
  CLUS_3                          21                            41
D4V6, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          15                            32
  CLUS_2                          18                            30
  CLUS_3                          18                            40
  CLUS_4                          14                            27
D4V7, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          13                            47
  CLUS_2                          43                            37
  CLUS_3                          28                            51
  CLUS_4                          11                            27
D4V8, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          31                            85
  CLUS_2                          45                            41
  CLUS_3                          19                            36
D4V9, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          53                            90
  CLUS_2                          46                           104
  CLUS_3                          14                            24
D4V10, multiclass
        clus
vv       AMP PEAK  4(2Q31.2) MUTATED AMP PEAK  4(2Q31.2) WILD-TYPE
  CLUS_1                          22                            28
  CLUS_2                          58                           115
  CLUS_3                          33                            75

Clustering(5) Variable = Amp Peak  5(3p11.1) mutation analysis
D5V1, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          15                            28
  CLUS_2                           9                            41
  CLUS_3                           3                            27
  CLUS_4                           7                            24
D5V2, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                           5                            23
  CLUS_2                          12                            42
  CLUS_3                          17                            55
D5V3, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          25                           104
  CLUS_2                          26                            86
  CLUS_3                          22                            95
D5V4, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          19                            71
  CLUS_2                          14                            61
  CLUS_3                          10                            49
D5V5, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                           9                            51
  CLUS_2                          19                            53
  CLUS_3                          10                            52
D5V6, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          17                            30
  CLUS_2                          12                            36
  CLUS_3                           4                            54
  CLUS_4                           5                            36
D5V7, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          20                            40
  CLUS_2                          15                            65
  CLUS_3                          13                            66
  CLUS_4                           5                            33
D5V8, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          25                            91
  CLUS_2                          20                            66
  CLUS_3                           8                            47
D5V9, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                          33                           110
  CLUS_2                          29                           121
  CLUS_3                           5                            33
D5V10, multiclass
        clus
vv       AMP PEAK  5(3P11.1) MUTATED AMP PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                           9                            41
  CLUS_2                          36                           137
  CLUS_3                          22                            86

Clustering(6) Variable = Amp Peak  6(3q26.33) mutation analysis
D6V1, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           41                              2
  CLUS_2                           50                              0
  CLUS_3                           23                              7
  CLUS_4                           26                              5
D6V2, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           19                              9
  CLUS_2                           54                              0
  CLUS_3                           67                              5
D6V3, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                          104                             25
  CLUS_2                          112                              0
  CLUS_3                          114                              3
D6V4, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           76                             14
  CLUS_2                           75                              0
  CLUS_3                           57                              2
D6V5, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           55                              5
  CLUS_2                           67                              5
  CLUS_3                           52                             10
D6V6, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           45                              2
  CLUS_2                           45                              3
  CLUS_3                           51                              7
  CLUS_4                           33                              8
D6V7, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           57                              3
  CLUS_2                           80                              0
  CLUS_3                           66                             13
  CLUS_4                           31                              7
D6V8, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                          100                             16
  CLUS_2                           86                              0
  CLUS_3                           48                              7
D6V9, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                          128                             15
  CLUS_2                          141                              9
  CLUS_3                           37                              1
D6V10, multiclass
        clus
vv       AMP PEAK  6(3Q26.33) MUTATED AMP PEAK  6(3Q26.33) WILD-TYPE
  CLUS_1                           50                              0
  CLUS_2                          150                             23
  CLUS_3                          106                              2

Clustering(7) Variable = Amp Peak  7(4q12) mutation analysis
D7V1, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        12                          31
  CLUS_2                        18                          32
  CLUS_3                         7                          23
  CLUS_4                        10                          21
D7V2, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                         7                          21
  CLUS_2                        18                          36
  CLUS_3                        22                          50
D7V3, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        19                         110
  CLUS_2                        29                          83
  CLUS_3                        37                          80
D7V4, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        14                          76
  CLUS_2                        19                          56
  CLUS_3                        11                          48
D7V5, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        13                          47
  CLUS_2                        18                          54
  CLUS_3                         9                          53
D7V6, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        16                          31
  CLUS_2                         9                          39
  CLUS_3                         9                          49
  CLUS_4                         6                          35
D7V7, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        13                          47
  CLUS_2                        22                          58
  CLUS_3                        23                          56
  CLUS_4                         7                          31
D7V8, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        27                          89
  CLUS_2                        24                          62
  CLUS_3                        14                          41
D7V9, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                        40                         103
  CLUS_2                        31                         119
  CLUS_3                         6                          32
D7V10, multiclass
        clus
vv       AMP PEAK  7(4Q12) MUTATED AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                         9                          41
  CLUS_2                        40                         133
  CLUS_3                        28                          80

Clustering(8) Variable = Amp Peak  8(5p15.33) mutation analysis
D8V1, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           36                              7
  CLUS_2                           39                             11
  CLUS_3                           23                              7
  CLUS_4                           24                              7
D8V2, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           22                              6
  CLUS_2                           44                             10
  CLUS_3                           56                             16
D8V3, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           89                             40
  CLUS_2                           84                             28
  CLUS_3                          108                              9
D8V4, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           68                             22
  CLUS_2                           54                             21
  CLUS_3                           55                              4
D8V5, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           57                             15
  CLUS_3                           51                             11
D8V6, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           39                              8
  CLUS_2                           40                              8
  CLUS_3                           44                             14
  CLUS_4                           29                             12
D8V7, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           61                             19
  CLUS_3                           66                             13
  CLUS_4                           32                              6
D8V8, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           96                             20
  CLUS_2                           64                             22
  CLUS_3                           43                             12
D8V9, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                          111                             32
  CLUS_2                          120                             30
  CLUS_3                           31                              7
D8V10, multiclass
        clus
vv       AMP PEAK  8(5P15.33) MUTATED AMP PEAK  8(5P15.33) WILD-TYPE
  CLUS_1                           36                             14
  CLUS_2                          136                             37
  CLUS_3                           90                             18

Clustering(9) Variable = Amp Peak  9(5p12) mutation analysis
D9V1, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        28                          15
  CLUS_2                        34                          16
  CLUS_3                        19                          11
  CLUS_4                        22                           9
D9V2, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        19                           9
  CLUS_2                        39                          15
  CLUS_3                        45                          27
D9V3, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        63                          66
  CLUS_2                        72                          40
  CLUS_3                       101                          16
D9V4, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        54                          36
  CLUS_2                        47                          28
  CLUS_3                        49                          10
D9V5, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        38                          22
  CLUS_2                        48                          24
  CLUS_3                        44                          18
D9V6, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        32                          15
  CLUS_2                        32                          16
  CLUS_3                        39                          19
  CLUS_4                        27                          14
D9V7, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        32                          28
  CLUS_2                        55                          25
  CLUS_3                        59                          20
  CLUS_4                        24                          14
D9V8, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        73                          43
  CLUS_2                        58                          28
  CLUS_3                        39                          16
D9V9, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        94                          49
  CLUS_2                        95                          55
  CLUS_3                        32                           6
D9V10, multiclass
        clus
vv       AMP PEAK  9(5P12) MUTATED AMP PEAK  9(5P12) WILD-TYPE
  CLUS_1                        35                          15
  CLUS_2                       108                          65
  CLUS_3                        78                          30

Clustering(10) Variable = Amp Peak 10(6q12) mutation analysis
D10V1, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        14                          29
  CLUS_2                        16                          34
  CLUS_3                         9                          21
  CLUS_4                        10                          21
D10V2, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        10                          18
  CLUS_2                        17                          37
  CLUS_3                        22                          50
D10V3, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        30                          99
  CLUS_2                        34                          78
  CLUS_3                        43                          74
D10V4, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        22                          68
  CLUS_2                        26                          49
  CLUS_3                        14                          45
D10V5, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        23                          37
  CLUS_2                        20                          52
  CLUS_3                        17                          45
D10V6, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        14                          33
  CLUS_2                        17                          31
  CLUS_3                        20                          38
  CLUS_4                         9                          32
D10V7, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        13                          47
  CLUS_2                        27                          53
  CLUS_3                        25                          54
  CLUS_4                        13                          25
D10V8, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        29                          87
  CLUS_2                        30                          56
  CLUS_3                        19                          36
D10V9, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        41                         102
  CLUS_2                        43                         107
  CLUS_3                        14                          24
D10V10, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        20                          30
  CLUS_2                        45                         128
  CLUS_3                        33                          75

Clustering(11) Variable = Amp Peak 11(7p11.2) mutation analysis
D11V1, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          20                            23
  CLUS_2                          32                            18
  CLUS_3                          13                            17
  CLUS_4                          14                            17
D11V2, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          14                            14
  CLUS_2                          34                            20
  CLUS_3                          31                            41
D11V3, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          53                            76
  CLUS_2                          70                            42
  CLUS_3                          51                            66
D11V4, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          36                            54
  CLUS_2                          48                            27
  CLUS_3                          23                            36
D11V5, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          26                            34
  CLUS_2                          37                            35
  CLUS_3                          29                            33
D11V6, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          24                            23
  CLUS_2                          24                            24
  CLUS_3                          25                            33
  CLUS_4                          19                            22
D11V7, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          30                            30
  CLUS_2                          51                            29
  CLUS_3                          37                            42
  CLUS_4                          16                            22
D11V8, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          57                            59
  CLUS_2                          55                            31
  CLUS_3                          22                            33
D11V9, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          74                            69
  CLUS_2                          71                            79
  CLUS_3                          20                            18
D11V10, multiclass
        clus
vv       AMP PEAK 11(7P11.2) MUTATED AMP PEAK 11(7P11.2) WILD-TYPE
  CLUS_1                          31                            19
  CLUS_2                          79                            94
  CLUS_3                          55                            53

Clustering(12) Variable = Amp Peak 12(7q21.2) mutation analysis
D12V1, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          27                            16
  CLUS_2                          34                            16
  CLUS_3                          13                            17
  CLUS_4                          15                            16
D12V2, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          14                            14
  CLUS_2                          36                            18
  CLUS_3                          39                            33
D12V3, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          44                            85
  CLUS_2                          85                            27
  CLUS_3                          59                            58
D12V4, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          32                            58
  CLUS_2                          54                            21
  CLUS_3                          26                            33
D12V5, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          35                            25
  CLUS_2                          42                            30
  CLUS_3                          24                            38
D12V6, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          30                            17
  CLUS_2                          22                            26
  CLUS_3                          31                            27
  CLUS_4                          18                            23
D12V7, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          30                            30
  CLUS_2                          56                            24
  CLUS_3                          40                            39
  CLUS_4                          17                            21
D12V8, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          59                            57
  CLUS_2                          58                            28
  CLUS_3                          26                            29
D12V9, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          80                            63
  CLUS_2                          74                            76
  CLUS_3                          24                            14
D12V10, multiclass
        clus
vv       AMP PEAK 12(7Q21.2) MUTATED AMP PEAK 12(7Q21.2) WILD-TYPE
  CLUS_1                          35                            15
  CLUS_2                          86                            87
  CLUS_3                          57                            51

Clustering(13) Variable = Amp Peak 13(8p11.23) mutation analysis
D13V1, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           31                             12
  CLUS_2                           23                             27
  CLUS_3                           11                             19
  CLUS_4                           13                             18
D13V2, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           11                             17
  CLUS_2                           25                             29
  CLUS_3                           42                             30
D13V3, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           54                             75
  CLUS_2                           50                             62
  CLUS_3                           64                             53
D13V4, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           32                             58
  CLUS_2                           38                             37
  CLUS_3                           29                             30
D13V5, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           41                             31
  CLUS_3                           32                             30
D13V6, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           24                             23
  CLUS_2                           24                             24
  CLUS_3                           23                             35
  CLUS_4                           27                             14
D13V7, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           40                             20
  CLUS_2                           39                             41
  CLUS_3                           29                             50
  CLUS_4                           19                             19
D13V8, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           54                             62
  CLUS_2                           45                             41
  CLUS_3                           28                             27
D13V9, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           75                             68
  CLUS_2                           63                             87
  CLUS_3                           15                             23
D13V10, multiclass
        clus
vv       AMP PEAK 13(8P11.23) MUTATED AMP PEAK 13(8P11.23) WILD-TYPE
  CLUS_1                           20                             30
  CLUS_2                           81                             92
  CLUS_3                           52                             56

Clustering(14) Variable = Amp Peak 14(8q24.21) mutation analysis
D14V1, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           30                             13
  CLUS_2                           33                             17
  CLUS_3                           20                             10
  CLUS_4                           23                              8
D14V2, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           21                              7
  CLUS_2                           35                             19
  CLUS_3                           50                             22
D14V3, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           87                             42
  CLUS_2                           74                             38
  CLUS_3                           87                             30
D14V4, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           64                             26
  CLUS_2                           54                             21
  CLUS_3                           38                             21
D14V5, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           44                             16
  CLUS_2                           54                             18
  CLUS_3                           45                             17
D14V6, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           36                             11
  CLUS_2                           37                             11
  CLUS_3                           42                             16
  CLUS_4                           28                             13
D14V7, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           40                             20
  CLUS_2                           58                             22
  CLUS_3                           59                             20
  CLUS_4                           26                             12
D14V8, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           78                             38
  CLUS_2                           65                             21
  CLUS_3                           40                             15
D14V9, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                          104                             39
  CLUS_2                          103                             47
  CLUS_3                           24                             14
D14V10, multiclass
        clus
vv       AMP PEAK 14(8Q24.21) MUTATED AMP PEAK 14(8Q24.21) WILD-TYPE
  CLUS_1                           34                             16
  CLUS_2                          122                             51
  CLUS_3                           75                             33

Clustering(15) Variable = Amp Peak 15(9p24.1) mutation analysis
D15V1, multiclass
        clus
vv       AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE
  CLUS_1                           5                            38
  CLUS_2                          13                            37
  CLUS_3                           6                            24
  CLUS_4                           6                            25
D15V2, multiclass
        clus
vv       AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE
  CLUS_1                           6                            22
  CLUS_2                          16                            38
  CLUS_3                           8                            64
D15V3, multiclass
        clus
vv       AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE
  CLUS_1                          26                           103
  CLUS_2                          31                            81
  CLUS_3                          10                           107
D15V4, multiclass
        clus
vv       AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE
  CLUS_1                          14                            76
  CLUS_2                          19                            56
  CLUS_3                           9                            50
D15V5, multiclass
        clus
vv       AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE
  CLUS_1                          20                            40
  CLUS_2                           8                            64
  CLUS_3                           7                            55
D15V6, multiclass
        clus
vv       AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE
  CLUS_1                           4                            43
  CLUS_2                           8                            40
  CLUS_3                          19                            39
  CLUS_4                           4                            37
D15V7, multiclass
        clus
vv       AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE
  CLUS_1                           9                            51
  CLUS_2                          24                            56
  CLUS_3                          13                            66
  CLUS_4                           4                            34
D15V8, multiclass
        clus
vv       AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE
  CLUS_1                          14                           102
  CLUS_2                          27                            59
  CLUS_3                           9                            46
D15V9, multiclass
        clus
vv       AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE
  CLUS_1                          31                           112
  CLUS_2                          26                           124
  CLUS_3                           6                            32
D15V10, multiclass
        clus
vv       AMP PEAK 15(9P24.1) MUTATED AMP PEAK 15(9P24.1) WILD-TYPE
  CLUS_1                          11                            39
  CLUS_2                          36                           137
  CLUS_3                          16                            92

Clustering(16) Variable = Amp Peak 16(9p13.3) mutation analysis
D16V1, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          11                            32
  CLUS_2                          13                            37
  CLUS_3                           4                            26
  CLUS_4                          12                            19
D16V2, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                           8                            20
  CLUS_2                          17                            37
  CLUS_3                          15                            57
D16V3, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          35                            94
  CLUS_2                          41                            71
  CLUS_3                          22                            95
D16V4, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          24                            66
  CLUS_2                          27                            48
  CLUS_3                          16                            43
D16V5, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          21                            39
  CLUS_2                          13                            59
  CLUS_3                          14                            48
D16V6, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                           9                            38
  CLUS_2                          13                            35
  CLUS_3                          22                            36
  CLUS_4                           4                            37
D16V7, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          12                            48
  CLUS_2                          28                            52
  CLUS_3                          22                            57
  CLUS_4                           4                            34
D16V8, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          27                            89
  CLUS_2                          28                            58
  CLUS_3                          11                            44
D16V9, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          40                           103
  CLUS_2                          39                           111
  CLUS_3                          14                            24
D16V10, multiclass
        clus
vv       AMP PEAK 16(9P13.3) MUTATED AMP PEAK 16(9P13.3) WILD-TYPE
  CLUS_1                          15                            35
  CLUS_2                          47                           126
  CLUS_3                          31                            77

Clustering(17) Variable = Amp Peak 17(11q13.3) mutation analysis
D17V1, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           17                             26
  CLUS_2                           10                             40
  CLUS_3                           11                             19
  CLUS_4                           14                             17
D17V2, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           12                             16
  CLUS_2                           11                             43
  CLUS_3                           29                             43
D17V3, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           37                             92
  CLUS_2                           41                             71
  CLUS_3                           53                             64
D17V4, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           23                             67
  CLUS_2                           31                             44
  CLUS_3                           32                             27
D17V5, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           24                             48
  CLUS_3                           17                             45
D17V6, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           21                             26
  CLUS_2                           15                             33
  CLUS_3                           23                             35
  CLUS_4                            8                             33
D17V7, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           17                             63
  CLUS_3                           30                             49
  CLUS_4                           16                             22
D17V8, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           46                             70
  CLUS_2                           23                             63
  CLUS_3                           21                             34
D17V9, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           54                             89
  CLUS_2                           61                             89
  CLUS_3                            9                             29
D17V10, multiclass
        clus
vv       AMP PEAK 17(11Q13.3) MUTATED AMP PEAK 17(11Q13.3) WILD-TYPE
  CLUS_1                           14                             36
  CLUS_2                           68                            105
  CLUS_3                           42                             66

Clustering(18) Variable = Amp Peak 18(12p13.33) mutation analysis
D18V1, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            13                              30
  CLUS_2                            32                              18
  CLUS_3                            12                              18
  CLUS_4                            14                              17
D18V2, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            11                              17
  CLUS_2                            32                              22
  CLUS_3                            28                              44
D18V3, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            48                              81
  CLUS_2                            71                              41
  CLUS_3                            58                              59
D18V4, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            39                              51
  CLUS_2                            50                              25
  CLUS_3                            32                              27
D18V5, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            36                              24
  CLUS_2                            34                              38
  CLUS_3                            33                              29
D18V6, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            23                              24
  CLUS_2                            26                              22
  CLUS_3                            34                              24
  CLUS_4                            20                              21
D18V7, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            18                              42
  CLUS_2                            52                              28
  CLUS_3                            42                              37
  CLUS_4                            18                              20
D18V8, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            46                              70
  CLUS_2                            53                              33
  CLUS_3                            31                              24
D18V9, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            72                              71
  CLUS_2                            79                              71
  CLUS_3                            17                              21
D18V10, multiclass
        clus
vv       AMP PEAK 18(12P13.33) MUTATED AMP PEAK 18(12P13.33) WILD-TYPE
  CLUS_1                            28                              22
  CLUS_2                            82                              91
  CLUS_3                            58                              50

Clustering(19) Variable = Amp Peak 19(12q15) mutation analysis
D19V1, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         11                           32
  CLUS_2                         20                           30
  CLUS_3                         11                           19
  CLUS_4                         14                           17
D19V2, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         12                           16
  CLUS_2                         21                           33
  CLUS_3                         23                           49
D19V3, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         38                           91
  CLUS_2                         54                           58
  CLUS_3                         40                           77
D19V4, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         25                           65
  CLUS_2                         38                           37
  CLUS_3                         21                           38
D19V5, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         25                           35
  CLUS_2                         26                           46
  CLUS_3                         23                           39
D19V6, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         15                           32
  CLUS_2                         22                           26
  CLUS_3                         24                           34
  CLUS_4                         13                           28
D19V7, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         15                           45
  CLUS_2                         36                           44
  CLUS_3                         31                           48
  CLUS_4                         14                           24
D19V8, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         34                           82
  CLUS_2                         37                           49
  CLUS_3                         25                           30
D19V9, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         55                           88
  CLUS_2                         57                           93
  CLUS_3                         11                           27
D19V10, multiclass
        clus
vv       AMP PEAK 19(12Q15) MUTATED AMP PEAK 19(12Q15) WILD-TYPE
  CLUS_1                         18                           32
  CLUS_2                         63                          110
  CLUS_3                         42                           66

Clustering(20) Variable = Amp Peak 20(13q34) mutation analysis
D20V1, multiclass
        clus
vv       AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE
  CLUS_1                          7                           36
  CLUS_2                         10                           40
  CLUS_3                          5                           25
  CLUS_4                          5                           26
D20V2, multiclass
        clus
vv       AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE
  CLUS_1                          9                           19
  CLUS_2                         10                           44
  CLUS_3                          8                           64
D20V3, multiclass
        clus
vv       AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE
  CLUS_1                         23                          106
  CLUS_2                         24                           88
  CLUS_3                         17                          100
D20V4, multiclass
        clus
vv       AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE
  CLUS_1                         13                           77
  CLUS_2                         14                           61
  CLUS_3                         16                           43
D20V5, multiclass
        clus
vv       AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE
  CLUS_1                         10                           50
  CLUS_2                         15                           57
  CLUS_3                         11                           51
D20V6, multiclass
        clus
vv       AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE
  CLUS_1                         13                           34
  CLUS_2                          8                           40
  CLUS_3                         11                           47
  CLUS_4                          4                           37
D20V7, multiclass
        clus
vv       AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE
  CLUS_1                         13                           47
  CLUS_2                         14                           66
  CLUS_3                         12                           67
  CLUS_4                          6                           32
D20V8, multiclass
        clus
vv       AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE
  CLUS_1                         19                           97
  CLUS_2                         13                           73
  CLUS_3                         13                           42
D20V9, multiclass
        clus
vv       AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE
  CLUS_1                         29                          114
  CLUS_2                         29                          121
  CLUS_3                          2                           36
D20V10, multiclass
        clus
vv       AMP PEAK 20(13Q34) MUTATED AMP PEAK 20(13Q34) WILD-TYPE
  CLUS_1                          5                           45
  CLUS_2                         35                          138
  CLUS_3                         20                           88

Clustering(21) Variable = Amp Peak 21(14q13.3) mutation analysis
D21V1, multiclass
        clus
vv       AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE
  CLUS_1                           18                             25
  CLUS_2                           15                             35
  CLUS_3                            7                             23
  CLUS_4                           12                             19
D21V2, multiclass
        clus
vv       AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE
  CLUS_1                           12                             16
  CLUS_2                           14                             40
  CLUS_3                           26                             46
D21V3, multiclass
        clus
vv       AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE
  CLUS_1                           37                             92
  CLUS_2                           39                             73
  CLUS_3                           34                             83
D21V4, multiclass
        clus
vv       AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE
  CLUS_1                           25                             65
  CLUS_2                           26                             49
  CLUS_3                           15                             44
D21V5, multiclass
        clus
vv       AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           27                             45
  CLUS_3                           19                             43
D21V6, multiclass
        clus
vv       AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE
  CLUS_1                           21                             26
  CLUS_2                           17                             31
  CLUS_3                           19                             39
  CLUS_4                            6                             35
D21V7, multiclass
        clus
vv       AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE
  CLUS_1                           21                             39
  CLUS_2                           26                             54
  CLUS_3                           22                             57
  CLUS_4                           15                             23
D21V8, multiclass
        clus
vv       AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE
  CLUS_1                           45                             71
  CLUS_2                           27                             59
  CLUS_3                           12                             43
D21V9, multiclass
        clus
vv       AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE
  CLUS_1                           55                             88
  CLUS_2                           43                            107
  CLUS_3                            6                             32
D21V10, multiclass
        clus
vv       AMP PEAK 21(14Q13.3) MUTATED AMP PEAK 21(14Q13.3) WILD-TYPE
  CLUS_1                            9                             41
  CLUS_2                           58                            115
  CLUS_3                           37                             71

Clustering(22) Variable = Amp Peak 22(15q26.3) mutation analysis
D22V1, multiclass
        clus
vv       AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE
  CLUS_1                           15                             28
  CLUS_2                           26                             24
  CLUS_3                            9                             21
  CLUS_4                           10                             21
D22V2, multiclass
        clus
vv       AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE
  CLUS_1                            6                             22
  CLUS_2                           28                             26
  CLUS_3                           26                             46
D22V3, multiclass
        clus
vv       AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE
  CLUS_1                           25                            104
  CLUS_2                           58                             54
  CLUS_3                           45                             72
D22V4, multiclass
        clus
vv       AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE
  CLUS_1                           15                             75
  CLUS_2                           37                             38
  CLUS_3                           24                             35
D22V5, multiclass
        clus
vv       AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           27                             45
  CLUS_3                           27                             35
D22V6, multiclass
        clus
vv       AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE
  CLUS_1                           18                             29
  CLUS_2                           26                             22
  CLUS_3                           14                             44
  CLUS_4                           14                             27
D22V7, multiclass
        clus
vv       AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE
  CLUS_1                           13                             47
  CLUS_2                           43                             37
  CLUS_3                           24                             55
  CLUS_4                           15                             23
D22V8, multiclass
        clus
vv       AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE
  CLUS_1                           35                             81
  CLUS_2                           44                             42
  CLUS_3                           16                             39
D22V9, multiclass
        clus
vv       AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE
  CLUS_1                           52                             91
  CLUS_2                           49                            101
  CLUS_3                           22                             16
D22V10, multiclass
        clus
vv       AMP PEAK 22(15Q26.3) MUTATED AMP PEAK 22(15Q26.3) WILD-TYPE
  CLUS_1                           28                             22
  CLUS_2                           46                            127
  CLUS_3                           49                             59

Clustering(23) Variable = Amp Peak 23(17q25.1) mutation analysis
D23V1, multiclass
        clus
vv       AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE
  CLUS_1                           19                             24
  CLUS_2                           32                             18
  CLUS_3                            9                             21
  CLUS_4                           18                             13
D23V2, multiclass
        clus
vv       AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE
  CLUS_1                           14                             14
  CLUS_2                           34                             20
  CLUS_3                           30                             42
D23V3, multiclass
        clus
vv       AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE
  CLUS_1                           40                             89
  CLUS_2                           71                             41
  CLUS_3                           60                             57
D23V4, multiclass
        clus
vv       AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE
  CLUS_1                           35                             55
  CLUS_2                           49                             26
  CLUS_3                           19                             40
D23V5, multiclass
        clus
vv       AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE
  CLUS_1                           33                             27
  CLUS_2                           31                             41
  CLUS_3                           26                             36
D23V6, multiclass
        clus
vv       AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE
  CLUS_1                           22                             25
  CLUS_2                           27                             21
  CLUS_3                           26                             32
  CLUS_4                           15                             26
D23V7, multiclass
        clus
vv       AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           50                             30
  CLUS_3                           35                             44
  CLUS_4                           14                             24
D23V8, multiclass
        clus
vv       AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE
  CLUS_1                           46                             70
  CLUS_2                           53                             33
  CLUS_3                           27                             28
D23V9, multiclass
        clus
vv       AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE
  CLUS_1                           72                             71
  CLUS_2                           70                             80
  CLUS_3                           17                             21
D23V10, multiclass
        clus
vv       AMP PEAK 23(17Q25.1) MUTATED AMP PEAK 23(17Q25.1) WILD-TYPE
  CLUS_1                           26                             24
  CLUS_2                           80                             93
  CLUS_3                           53                             55

Clustering(24) Variable = Amp Peak 24(18p11.32) mutation analysis
D24V1, multiclass
        clus
vv       AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE
  CLUS_1                            13                              30
  CLUS_2                            25                              25
  CLUS_3                             7                              23
  CLUS_4                             9                              22
D24V2, multiclass
        clus
vv       AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE
  CLUS_1                             8                              20
  CLUS_2                            28                              26
  CLUS_3                            18                              54
D24V3, multiclass
        clus
vv       AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE
  CLUS_1                            29                             100
  CLUS_2                            54                              58
  CLUS_3                            39                              78
D24V4, multiclass
        clus
vv       AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE
  CLUS_1                            22                              68
  CLUS_2                            32                              43
  CLUS_3                            23                              36
D24V5, multiclass
        clus
vv       AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE
  CLUS_1                            26                              34
  CLUS_2                            29                              43
  CLUS_3                            18                              44
D24V6, multiclass
        clus
vv       AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE
  CLUS_1                            19                              28
  CLUS_2                            18                              30
  CLUS_3                            23                              35
  CLUS_4                            13                              28
D24V7, multiclass
        clus
vv       AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE
  CLUS_1                            19                              41
  CLUS_2                            32                              48
  CLUS_3                            26                              53
  CLUS_4                            11                              27
D24V8, multiclass
        clus
vv       AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE
  CLUS_1                            34                              82
  CLUS_2                            36                              50
  CLUS_3                            18                              37
D24V9, multiclass
        clus
vv       AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE
  CLUS_1                            52                              91
  CLUS_2                            49                             101
  CLUS_3                            16                              22
D24V10, multiclass
        clus
vv       AMP PEAK 24(18P11.32) MUTATED AMP PEAK 24(18P11.32) WILD-TYPE
  CLUS_1                            21                              29
  CLUS_2                            53                             120
  CLUS_3                            43                              65

Clustering(25) Variable = Amp Peak 25(18q11.2) mutation analysis
D25V1, multiclass
        clus
vv       AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE
  CLUS_1                            9                             34
  CLUS_2                           24                             26
  CLUS_3                            4                             26
  CLUS_4                           16                             15
D25V2, multiclass
        clus
vv       AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE
  CLUS_1                           11                             17
  CLUS_2                           27                             27
  CLUS_3                           15                             57
D25V3, multiclass
        clus
vv       AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE
  CLUS_1                           26                            103
  CLUS_2                           50                             62
  CLUS_3                           39                             78
D25V4, multiclass
        clus
vv       AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE
  CLUS_1                           19                             71
  CLUS_2                           34                             41
  CLUS_3                           18                             41
D25V5, multiclass
        clus
vv       AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE
  CLUS_1                           24                             36
  CLUS_2                           23                             49
  CLUS_3                           16                             46
D25V6, multiclass
        clus
vv       AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE
  CLUS_1                           14                             33
  CLUS_2                           15                             33
  CLUS_3                           22                             36
  CLUS_4                           12                             29
D25V7, multiclass
        clus
vv       AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE
  CLUS_1                           13                             47
  CLUS_2                           34                             46
  CLUS_3                           33                             46
  CLUS_4                            7                             31
D25V8, multiclass
        clus
vv       AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE
  CLUS_1                           25                             91
  CLUS_2                           36                             50
  CLUS_3                           26                             29
D25V9, multiclass
        clus
vv       AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE
  CLUS_1                           50                             93
  CLUS_2                           44                            106
  CLUS_3                           15                             23
D25V10, multiclass
        clus
vv       AMP PEAK 25(18Q11.2) MUTATED AMP PEAK 25(18Q11.2) WILD-TYPE
  CLUS_1                           20                             30
  CLUS_2                           44                            129
  CLUS_3                           45                             63

Clustering(26) Variable = Amp Peak 26(19q12) mutation analysis
D26V1, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         16                           27
  CLUS_2                         25                           25
  CLUS_3                         10                           20
  CLUS_4                         13                           18
D26V2, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         14                           14
  CLUS_2                         25                           29
  CLUS_3                         25                           47
D26V3, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         42                           87
  CLUS_2                         65                           47
  CLUS_3                         42                           75
D26V4, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         36                           54
  CLUS_2                         37                           38
  CLUS_3                         24                           35
D26V5, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         31                           29
  CLUS_2                         27                           45
  CLUS_3                         28                           34
D26V6, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         21                           26
  CLUS_2                         24                           24
  CLUS_3                         31                           27
  CLUS_4                         10                           31
D26V7, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         19                           41
  CLUS_2                         39                           41
  CLUS_3                         36                           43
  CLUS_4                         18                           20
D26V8, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         42                           74
  CLUS_2                         41                           45
  CLUS_3                         29                           26
D26V9, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         60                           83
  CLUS_2                         64                           86
  CLUS_3                         17                           21
D26V10, multiclass
        clus
vv       AMP PEAK 26(19Q12) MUTATED AMP PEAK 26(19Q12) WILD-TYPE
  CLUS_1                         19                           31
  CLUS_2                         73                          100
  CLUS_3                         49                           59

Clustering(27) Variable = Amp Peak 27(19q13.2) mutation analysis
D27V1, multiclass
        clus
vv       AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE
  CLUS_1                           21                             22
  CLUS_2                           26                             24
  CLUS_3                           11                             19
  CLUS_4                           12                             19
D27V2, multiclass
        clus
vv       AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE
  CLUS_1                           12                             16
  CLUS_2                           26                             28
  CLUS_3                           32                             40
D27V3, multiclass
        clus
vv       AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE
  CLUS_1                           45                             84
  CLUS_2                           66                             46
  CLUS_3                           46                             71
D27V4, multiclass
        clus
vv       AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE
  CLUS_1                           36                             54
  CLUS_2                           39                             36
  CLUS_3                           24                             35
D27V5, multiclass
        clus
vv       AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE
  CLUS_1                           32                             28
  CLUS_2                           29                             43
  CLUS_3                           28                             34
D27V6, multiclass
        clus
vv       AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE
  CLUS_1                           20                             27
  CLUS_2                           26                             22
  CLUS_3                           30                             28
  CLUS_4                           13                             28
D27V7, multiclass
        clus
vv       AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE
  CLUS_1                           23                             37
  CLUS_2                           41                             39
  CLUS_3                           35                             44
  CLUS_4                           19                             19
D27V8, multiclass
        clus
vv       AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE
  CLUS_1                           43                             73
  CLUS_2                           45                             41
  CLUS_3                           30                             25
D27V9, multiclass
        clus
vv       AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE
  CLUS_1                           66                             77
  CLUS_2                           67                             83
  CLUS_3                           17                             21
D27V10, multiclass
        clus
vv       AMP PEAK 27(19Q13.2) MUTATED AMP PEAK 27(19Q13.2) WILD-TYPE
  CLUS_1                           19                             31
  CLUS_2                           76                             97
  CLUS_3                           55                             53

Clustering(28) Variable = Amp Peak 28(20p12.2) mutation analysis
D28V1, multiclass
        clus
vv       AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE
  CLUS_1                           23                             20
  CLUS_2                           36                             14
  CLUS_3                            9                             21
  CLUS_4                           12                             19
D28V2, multiclass
        clus
vv       AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE
  CLUS_1                            8                             20
  CLUS_2                           36                             18
  CLUS_3                           36                             36
D28V3, multiclass
        clus
vv       AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE
  CLUS_1                           48                             81
  CLUS_2                           83                             29
  CLUS_3                           62                             55
D28V4, multiclass
        clus
vv       AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE
  CLUS_1                           41                             49
  CLUS_2                           54                             21
  CLUS_3                           29                             30
D28V5, multiclass
        clus
vv       AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           38                             34
  CLUS_3                           34                             28
D28V6, multiclass
        clus
vv       AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE
  CLUS_1                           28                             19
  CLUS_2                           29                             19
  CLUS_3                           28                             30
  CLUS_4                           18                             23
D28V7, multiclass
        clus
vv       AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE
  CLUS_1                           28                             32
  CLUS_2                           52                             28
  CLUS_3                           44                             35
  CLUS_4                           19                             19
D28V8, multiclass
        clus
vv       AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE
  CLUS_1                           53                             63
  CLUS_2                           56                             30
  CLUS_3                           34                             21
D28V9, multiclass
        clus
vv       AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE
  CLUS_1                           71                             72
  CLUS_2                           85                             65
  CLUS_3                           21                             17
D28V10, multiclass
        clus
vv       AMP PEAK 28(20P12.2) MUTATED AMP PEAK 28(20P12.2) WILD-TYPE
  CLUS_1                           30                             20
  CLUS_2                           85                             88
  CLUS_3                           62                             46

Clustering(29) Variable = Amp Peak 29(20q11.21) mutation analysis
D29V1, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            26                              17
  CLUS_2                            29                              21
  CLUS_3                            17                              13
  CLUS_4                            18                              13
D29V2, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            16                              12
  CLUS_2                            30                              24
  CLUS_3                            44                              28
D29V3, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            59                              70
  CLUS_2                            74                              38
  CLUS_3                            73                              44
D29V4, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            44                              46
  CLUS_2                            51                              24
  CLUS_3                            31                              28
D29V5, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            35                              25
  CLUS_2                            44                              28
  CLUS_3                            34                              28
D29V6, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            29                              18
  CLUS_2                            30                              18
  CLUS_3                            33                              25
  CLUS_4                            21                              20
D29V7, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            32                              28
  CLUS_2                            48                              32
  CLUS_3                            51                              28
  CLUS_4                            24                              14
D29V8, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            66                              50
  CLUS_2                            53                              33
  CLUS_3                            36                              19
D29V9, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            82                              61
  CLUS_2                            85                              65
  CLUS_3                            23                              15
D29V10, multiclass
        clus
vv       AMP PEAK 29(20Q11.21) MUTATED AMP PEAK 29(20Q11.21) WILD-TYPE
  CLUS_1                            27                              23
  CLUS_2                            97                              76
  CLUS_3                            66                              42

Clustering(30) Variable = Amp Peak 30(22q11.21) mutation analysis
D30V1, multiclass
        clus
vv       AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE
  CLUS_1                            22                              21
  CLUS_2                            30                              20
  CLUS_3                            10                              20
  CLUS_4                            13                              18
D30V2, multiclass
        clus
vv       AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE
  CLUS_1                             9                              19
  CLUS_2                            30                              24
  CLUS_3                            36                              36
D30V3, multiclass
        clus
vv       AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE
  CLUS_1                            53                              76
  CLUS_2                            67                              45
  CLUS_3                            57                              60
D30V4, multiclass
        clus
vv       AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE
  CLUS_1                            37                              53
  CLUS_2                            50                              25
  CLUS_3                            27                              32
D30V5, multiclass
        clus
vv       AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE
  CLUS_1                            29                              31
  CLUS_2                            37                              35
  CLUS_3                            33                              29
D30V6, multiclass
        clus
vv       AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE
  CLUS_1                            25                              22
  CLUS_2                            28                              20
  CLUS_3                            24                              34
  CLUS_4                            22                              19
D30V7, multiclass
        clus
vv       AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE
  CLUS_1                            26                              34
  CLUS_2                            51                              29
  CLUS_3                            37                              42
  CLUS_4                            19                              19
D30V8, multiclass
        clus
vv       AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE
  CLUS_1                            56                              60
  CLUS_2                            53                              33
  CLUS_3                            24                              31
D30V9, multiclass
        clus
vv       AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE
  CLUS_1                            72                              71
  CLUS_2                            76                              74
  CLUS_3                            17                              21
D30V10, multiclass
        clus
vv       AMP PEAK 30(22Q11.21) MUTATED AMP PEAK 30(22Q11.21) WILD-TYPE
  CLUS_1                            25                              25
  CLUS_2                            78                              95
  CLUS_3                            62                              46

Clustering(31) Variable = Amp Peak 31(Xq28) mutation analysis
D31V1, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                         9                          34
  CLUS_2                        16                          34
  CLUS_3                         7                          23
  CLUS_4                         9                          22
D31V2, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                         8                          20
  CLUS_2                        17                          37
  CLUS_3                        16                          56
D31V3, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        28                         101
  CLUS_2                        35                          77
  CLUS_3                        29                          88
D31V4, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        25                          65
  CLUS_2                        23                          52
  CLUS_3                         9                          50
D31V5, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        15                          45
  CLUS_2                        26                          46
  CLUS_3                        11                          51
D31V6, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        19                          28
  CLUS_2                         9                          39
  CLUS_3                        12                          46
  CLUS_4                        12                          29
D31V7, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        12                          48
  CLUS_2                        27                          53
  CLUS_3                        25                          54
  CLUS_4                         7                          31
D31V8, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        26                          90
  CLUS_2                        28                          58
  CLUS_3                        17                          38
D31V9, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        38                         105
  CLUS_2                        36                         114
  CLUS_3                        11                          27
D31V10, multiclass
        clus
vv       AMP PEAK 31(XQ28) MUTATED AMP PEAK 31(XQ28) WILD-TYPE
  CLUS_1                        14                          36
  CLUS_2                        42                         131
  CLUS_3                        29                          79

Clustering(32) Variable = Del Peak  1(1p36.32) mutation analysis
D32V1, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                            9                             34
  CLUS_2                           37                             13
  CLUS_3                           12                             18
  CLUS_4                           10                             21
D32V2, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           10                             18
  CLUS_2                           41                             13
  CLUS_3                           17                             55
D32V3, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           33                             96
  CLUS_2                           96                             16
  CLUS_3                           26                             91
D32V4, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           15                             75
  CLUS_2                           59                             16
  CLUS_3                           19                             40
D32V5, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           28                             32
  CLUS_2                           26                             46
  CLUS_3                           28                             34
D32V6, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           15                             32
  CLUS_2                           31                             17
  CLUS_3                           22                             36
  CLUS_4                           14                             27
D32V7, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           16                             44
  CLUS_2                           61                             19
  CLUS_3                           26                             53
  CLUS_4                           11                             27
D32V8, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           37                             79
  CLUS_2                           61                             25
  CLUS_3                           16                             39
D32V9, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           60                             83
  CLUS_2                           58                             92
  CLUS_3                           24                             14
D32V10, multiclass
        clus
vv       DEL PEAK  1(1P36.32) MUTATED DEL PEAK  1(1P36.32) WILD-TYPE
  CLUS_1                           33                             17
  CLUS_2                           63                            110
  CLUS_3                           46                             62

Clustering(33) Variable = Del Peak  2(1p13.2) mutation analysis
D33V1, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          17                            26
  CLUS_2                          35                            15
  CLUS_3                           8                            22
  CLUS_4                          10                            21
D33V2, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          10                            18
  CLUS_2                          36                            18
  CLUS_3                          24                            48
D33V3, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          34                            95
  CLUS_2                          82                            30
  CLUS_3                          40                            77
D33V4, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          19                            71
  CLUS_2                          51                            24
  CLUS_3                          24                            35
D33V5, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          33                            27
  CLUS_2                          27                            45
  CLUS_3                          25                            37
D33V6, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          19                            28
  CLUS_2                          28                            20
  CLUS_3                          24                            34
  CLUS_4                          14                            27
D33V7, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          23                            37
  CLUS_2                          53                            27
  CLUS_3                          25                            54
  CLUS_4                          12                            26
D33V8, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          38                            78
  CLUS_2                          54                            32
  CLUS_3                          21                            34
D33V9, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          64                            79
  CLUS_2                          59                            91
  CLUS_3                          21                            17
D33V10, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          31                            19
  CLUS_2                          65                           108
  CLUS_3                          48                            60

Clustering(34) Variable = Del Peak  3(2p25.3) mutation analysis
D34V1, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           7                            36
  CLUS_2                           3                            47
  CLUS_3                           1                            29
  CLUS_4                           7                            24
D34V2, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           6                            22
  CLUS_2                           4                            50
  CLUS_3                           8                            64
D34V3, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           9                           120
  CLUS_2                           8                           104
  CLUS_3                          17                           100
D34V4, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           7                            83
  CLUS_2                           5                            70
  CLUS_3                           8                            51
D34V5, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           8                            52
  CLUS_2                           7                            65
  CLUS_3                           2                            60
D34V6, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           5                            42
  CLUS_2                           4                            44
  CLUS_3                           6                            52
  CLUS_4                           2                            39
D34V7, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           8                            52
  CLUS_2                           4                            76
  CLUS_3                           9                            70
  CLUS_4                           4                            34
D34V8, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          12                           104
  CLUS_2                           5                            81
  CLUS_3                           8                            47
D34V9, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          19                           124
  CLUS_2                          12                           138
  CLUS_3                           1                            37
D34V10, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           2                            48
  CLUS_2                          23                           150
  CLUS_3                           7                           101

Clustering(35) Variable = Del Peak  4(2q22.1) mutation analysis
D35V1, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           9                            34
  CLUS_2                          16                            34
  CLUS_3                           6                            24
  CLUS_4                          12                            19
D35V2, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           9                            19
  CLUS_2                          18                            36
  CLUS_3                          16                            56
D35V3, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          19                           110
  CLUS_2                          41                            71
  CLUS_3                          36                            81
D35V4, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          15                            75
  CLUS_2                          22                            53
  CLUS_3                          21                            38
D35V5, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          19                            53
  CLUS_3                          12                            50
D35V6, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          14                            33
  CLUS_2                          13                            35
  CLUS_3                          13                            45
  CLUS_4                           5                            36
D35V7, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          13                            47
  CLUS_2                          23                            57
  CLUS_3                          26                            53
  CLUS_4                           6                            32
D35V8, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          25                            91
  CLUS_2                          25                            61
  CLUS_3                          18                            37
D35V9, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          41                           102
  CLUS_2                          38                           112
  CLUS_3                          12                            26
D35V10, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          14                            36
  CLUS_2                          52                           121
  CLUS_3                          25                            83

Clustering(36) Variable = Del Peak  5(2q36.2) mutation analysis
D36V1, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                           9                            34
  CLUS_2                          26                            24
  CLUS_3                           3                            27
  CLUS_4                          12                            19
D36V2, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                           5                            23
  CLUS_2                          30                            24
  CLUS_3                          15                            57
D36V3, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          20                           109
  CLUS_2                          65                            47
  CLUS_3                          31                            86
D36V4, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          19                            71
  CLUS_2                          38                            37
  CLUS_3                          19                            40
D36V5, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          23                            37
  CLUS_2                          16                            56
  CLUS_3                          19                            43
D36V6, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                           9                            38
  CLUS_2                          20                            28
  CLUS_3                          16                            42
  CLUS_4                          13                            28
D36V7, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          17                            43
  CLUS_2                          40                            40
  CLUS_3                          18                            61
  CLUS_4                           5                            33
D36V8, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          23                            93
  CLUS_2                          44                            42
  CLUS_3                          13                            42
D36V9, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          48                            95
  CLUS_2                          48                           102
  CLUS_3                          13                            25
D36V10, multiclass
        clus
vv       DEL PEAK  5(2Q36.2) MUTATED DEL PEAK  5(2Q36.2) WILD-TYPE
  CLUS_1                          18                            32
  CLUS_2                          53                           120
  CLUS_3                          38                            70

Clustering(37) Variable = Del Peak  6(3p25.3) mutation analysis
D37V1, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          31                            12
  CLUS_2                          42                             8
  CLUS_3                          23                             7
  CLUS_4                          25                             6
D37V2, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          19                             9
  CLUS_2                          46                             8
  CLUS_3                          56                            16
D37V3, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          96                            33
  CLUS_2                          98                            14
  CLUS_3                          91                            26
D37V4, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          63                            27
  CLUS_2                          67                             8
  CLUS_3                          51                             8
D37V5, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          56                            16
  CLUS_3                          51                            11
D37V6, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          39                             8
  CLUS_2                          41                             7
  CLUS_3                          44                            14
  CLUS_4                          28                            13
D37V7, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          48                            12
  CLUS_2                          68                            12
  CLUS_3                          61                            18
  CLUS_4                          27                            11
D37V8, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          82                            34
  CLUS_2                          74                            12
  CLUS_3                          48                             7
D37V9, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                         110                            33
  CLUS_2                         122                            28
  CLUS_3                          30                             8
D37V10, multiclass
        clus
vv       DEL PEAK  6(3P25.3) MUTATED DEL PEAK  6(3P25.3) WILD-TYPE
  CLUS_1                          43                             7
  CLUS_2                         126                            47
  CLUS_3                          93                            15

Clustering(38) Variable = Del Peak  7(3p13) mutation analysis
D38V1, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        39                           4
  CLUS_2                        42                           8
  CLUS_3                        23                           7
  CLUS_4                        27                           4
D38V2, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        22                           6
  CLUS_2                        47                           7
  CLUS_3                        62                          10
D38V3, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        98                          31
  CLUS_2                       104                           8
  CLUS_3                       108                           9
D38V4, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        70                          20
  CLUS_2                        70                           5
  CLUS_3                        56                           3
D38V5, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        51                           9
  CLUS_2                        61                          11
  CLUS_3                        51                          11
D38V6, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        43                           4
  CLUS_2                        44                           4
  CLUS_3                        48                          10
  CLUS_4                        28                          13
D38V7, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        53                           7
  CLUS_2                        70                          10
  CLUS_3                        66                          13
  CLUS_4                        29                           9
D38V8, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        90                          26
  CLUS_2                        77                           9
  CLUS_3                        51                           4
D38V9, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                       124                          19
  CLUS_2                       131                          19
  CLUS_3                        32                           6
D38V10, multiclass
        clus
vv       DEL PEAK  7(3P13) MUTATED DEL PEAK  7(3P13) WILD-TYPE
  CLUS_1                        43                           7
  CLUS_2                       142                          31
  CLUS_3                       102                           6

Clustering(39) Variable = Del Peak  8(3p12.1) mutation analysis
D39V1, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          32                            11
  CLUS_2                          41                             9
  CLUS_3                          19                            11
  CLUS_4                          23                             8
D39V2, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          17                            11
  CLUS_2                          46                             8
  CLUS_3                          52                            20
D39V3, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          80                            49
  CLUS_2                         101                            11
  CLUS_3                          99                            18
D39V4, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          59                            31
  CLUS_2                          66                             9
  CLUS_3                          55                             4
D39V5, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          48                            12
  CLUS_2                          53                            19
  CLUS_3                          47                            15
D39V6, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          35                            12
  CLUS_2                          38                            10
  CLUS_3                          49                             9
  CLUS_4                          26                            15
D39V7, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          67                            13
  CLUS_3                          58                            21
  CLUS_4                          25                            13
D39V8, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          76                            40
  CLUS_2                          73                            13
  CLUS_3                          46                             9
D39V9, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                         106                            37
  CLUS_2                         121                            29
  CLUS_3                          33                             5
D39V10, multiclass
        clus
vv       DEL PEAK  8(3P12.1) MUTATED DEL PEAK  8(3P12.1) WILD-TYPE
  CLUS_1                          43                             7
  CLUS_2                         128                            45
  CLUS_3                          89                            19

Clustering(40) Variable = Del Peak  9(4p15.31) mutation analysis
D40V1, multiclass
        clus
vv       DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE
  CLUS_1                           30                             13
  CLUS_2                           38                             12
  CLUS_3                           11                             19
  CLUS_4                           14                             17
D40V2, multiclass
        clus
vv       DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE
  CLUS_1                           10                             18
  CLUS_2                           41                             13
  CLUS_3                           42                             30
D40V3, multiclass
        clus
vv       DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE
  CLUS_1                           65                             64
  CLUS_2                           88                             24
  CLUS_3                           66                             51
D40V4, multiclass
        clus
vv       DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE
  CLUS_1                           44                             46
  CLUS_2                           55                             20
  CLUS_3                           39                             20
D40V5, multiclass
        clus
vv       DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE
  CLUS_1                           42                             18
  CLUS_2                           46                             26
  CLUS_3                           39                             23
D40V6, multiclass
        clus
vv       DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE
  CLUS_1                           36                             11
  CLUS_2                           35                             13
  CLUS_3                           35                             23
  CLUS_4                           21                             20
D40V7, multiclass
        clus
vv       DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE
  CLUS_1                           38                             22
  CLUS_2                           56                             24
  CLUS_3                           40                             39
  CLUS_4                           22                             16
D40V8, multiclass
        clus
vv       DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE
  CLUS_1                           63                             53
  CLUS_2                           61                             25
  CLUS_3                           32                             23
D40V9, multiclass
        clus
vv       DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE
  CLUS_1                           92                             51
  CLUS_2                           94                             56
  CLUS_3                           20                             18
D40V10, multiclass
        clus
vv       DEL PEAK  9(4P15.31) MUTATED DEL PEAK  9(4P15.31) WILD-TYPE
  CLUS_1                           31                             19
  CLUS_2                          108                             65
  CLUS_3                           67                             41

Clustering(41) Variable = Del Peak 10(4q22.1) mutation analysis
D41V1, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          28                            15
  CLUS_2                          36                            14
  CLUS_3                          10                            20
  CLUS_4                          18                            13
D41V2, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          16                            12
  CLUS_2                          39                            15
  CLUS_3                          37                            35
D41V3, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          61                            68
  CLUS_2                          79                            33
  CLUS_3                          59                            58
D41V4, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          40                            50
  CLUS_2                          48                            27
  CLUS_3                          30                            29
D41V5, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          41                            19
  CLUS_2                          37                            35
  CLUS_3                          36                            26
D41V6, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          25                            22
  CLUS_2                          29                            19
  CLUS_3                          39                            19
  CLUS_4                          21                            20
D41V7, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          32                            28
  CLUS_2                          56                            24
  CLUS_3                          37                            42
  CLUS_4                          21                            17
D41V8, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          54                            62
  CLUS_2                          59                            27
  CLUS_3                          33                            22
D41V9, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          86                            57
  CLUS_2                          78                            72
  CLUS_3                          21                            17
D41V10, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          34                            16
  CLUS_2                          90                            83
  CLUS_3                          61                            47

Clustering(42) Variable = Del Peak 11(4q32.3) mutation analysis
D42V1, multiclass
        clus
vv       DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE
  CLUS_1                          28                            15
  CLUS_2                          40                            10
  CLUS_3                          13                            17
  CLUS_4                          22                             9
D42V2, multiclass
        clus
vv       DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE
  CLUS_1                          19                             9
  CLUS_2                          43                            11
  CLUS_3                          41                            31
D42V3, multiclass
        clus
vv       DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE
  CLUS_1                          67                            62
  CLUS_2                          93                            19
  CLUS_3                          66                            51
D42V4, multiclass
        clus
vv       DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE
  CLUS_1                          45                            45
  CLUS_2                          54                            21
  CLUS_3                          39                            20
D42V5, multiclass
        clus
vv       DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE
  CLUS_1                          44                            16
  CLUS_2                          41                            31
  CLUS_3                          36                            26
D42V6, multiclass
        clus
vv       DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE
  CLUS_1                          30                            17
  CLUS_2                          30                            18
  CLUS_3                          39                            19
  CLUS_4                          22                            19
D42V7, multiclass
        clus
vv       DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE
  CLUS_1                          33                            27
  CLUS_2                          62                            18
  CLUS_3                          42                            37
  CLUS_4                          23                            15
D42V8, multiclass
        clus
vv       DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE
  CLUS_1                          63                            53
  CLUS_2                          62                            24
  CLUS_3                          35                            20
D42V9, multiclass
        clus
vv       DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE
  CLUS_1                          96                            47
  CLUS_2                          92                            58
  CLUS_3                          22                            16
D42V10, multiclass
        clus
vv       DEL PEAK 11(4Q32.3) MUTATED DEL PEAK 11(4Q32.3) WILD-TYPE
  CLUS_1                          35                            15
  CLUS_2                         101                            72
  CLUS_3                          74                            34

Clustering(43) Variable = Del Peak 12(4q35.2) mutation analysis
D43V1, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          29                            14
  CLUS_2                          38                            12
  CLUS_3                          15                            15
  CLUS_4                          23                             8
D43V2, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          20                             8
  CLUS_2                          41                            13
  CLUS_3                          44                            28
D43V3, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          70                            59
  CLUS_2                          93                            19
  CLUS_3                          66                            51
D43V4, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          45                            45
  CLUS_2                          57                            18
  CLUS_3                          37                            22
D43V5, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          42                            18
  CLUS_2                          44                            28
  CLUS_3                          37                            25
D43V6, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          31                            16
  CLUS_2                          32                            16
  CLUS_3                          38                            20
  CLUS_4                          22                            19
D43V7, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          32                            28
  CLUS_2                          63                            17
  CLUS_3                          46                            33
  CLUS_4                          22                            16
D43V8, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          67                            49
  CLUS_2                          62                            24
  CLUS_3                          34                            21
D43V9, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          95                            48
  CLUS_2                          92                            58
  CLUS_3                          24                            14
D43V10, multiclass
        clus
vv       DEL PEAK 12(4Q35.2) MUTATED DEL PEAK 12(4Q35.2) WILD-TYPE
  CLUS_1                          36                            14
  CLUS_2                         105                            68
  CLUS_3                          70                            38

Clustering(44) Variable = Del Peak 13(5q11.2) mutation analysis
D44V1, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          31                            12
  CLUS_2                          38                            12
  CLUS_3                          20                            10
  CLUS_4                          23                             8
D44V2, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          18                            10
  CLUS_2                          43                            11
  CLUS_3                          51                            21
D44V3, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          69                            60
  CLUS_2                          96                            16
  CLUS_3                         100                            17
D44V4, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          54                            36
  CLUS_2                          62                            13
  CLUS_3                          51                             8
D44V5, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          43                            17
  CLUS_2                          52                            20
  CLUS_3                          45                            17
D44V6, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          35                            12
  CLUS_2                          38                            10
  CLUS_3                          36                            22
  CLUS_4                          31                            10
D44V7, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          38                            22
  CLUS_2                          63                            17
  CLUS_3                          58                            21
  CLUS_4                          27                            11
D44V8, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          80                            36
  CLUS_2                          65                            21
  CLUS_3                          41                            14
D44V9, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                         107                            36
  CLUS_2                         112                            38
  CLUS_3                          30                             8
D44V10, multiclass
        clus
vv       DEL PEAK 13(5Q11.2) MUTATED DEL PEAK 13(5Q11.2) WILD-TYPE
  CLUS_1                          39                            11
  CLUS_2                         115                            58
  CLUS_3                          95                            13

Clustering(45) Variable = Del Peak 14(5q31.1) mutation analysis
D45V1, multiclass
        clus
vv       DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE
  CLUS_1                          34                             9
  CLUS_2                          40                            10
  CLUS_3                          19                            11
  CLUS_4                          22                             9
D45V2, multiclass
        clus
vv       DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE
  CLUS_1                          18                            10
  CLUS_2                          44                            10
  CLUS_3                          53                            19
D45V3, multiclass
        clus
vv       DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE
  CLUS_1                          79                            50
  CLUS_2                          97                            15
  CLUS_3                         101                            16
D45V4, multiclass
        clus
vv       DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE
  CLUS_1                          58                            32
  CLUS_2                          64                            11
  CLUS_3                          55                             4
D45V5, multiclass
        clus
vv       DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE
  CLUS_1                          42                            18
  CLUS_2                          52                            20
  CLUS_3                          50                            12
D45V6, multiclass
        clus
vv       DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE
  CLUS_1                          36                            11
  CLUS_2                          38                            10
  CLUS_3                          37                            21
  CLUS_4                          33                             8
D45V7, multiclass
        clus
vv       DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE
  CLUS_1                          42                            18
  CLUS_2                          66                            14
  CLUS_3                          56                            23
  CLUS_4                          29                             9
D45V8, multiclass
        clus
vv       DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE
  CLUS_1                          84                            32
  CLUS_2                          69                            17
  CLUS_3                          40                            15
D45V9, multiclass
        clus
vv       DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE
  CLUS_1                         109                            34
  CLUS_2                         118                            32
  CLUS_3                          32                             6
D45V10, multiclass
        clus
vv       DEL PEAK 14(5Q31.1) MUTATED DEL PEAK 14(5Q31.1) WILD-TYPE
  CLUS_1                          38                            12
  CLUS_2                         126                            47
  CLUS_3                          95                            13

Clustering(46) Variable = Del Peak 15(6p25.3) mutation analysis
D46V1, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           8                            35
  CLUS_2                          17                            33
  CLUS_3                           6                            24
  CLUS_4                           5                            26
D46V2, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           3                            25
  CLUS_2                          17                            37
  CLUS_3                          16                            56
D46V3, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          25                           104
  CLUS_2                          39                            73
  CLUS_3                          26                            91
D46V4, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          15                            75
  CLUS_2                          32                            43
  CLUS_3                          13                            46
D46V5, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          21                            51
  CLUS_3                          13                            49
D46V6, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          15                            32
  CLUS_2                           4                            44
  CLUS_3                          15                            43
  CLUS_4                          14                            27
D46V7, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          15                            45
  CLUS_2                          31                            49
  CLUS_3                          13                            66
  CLUS_4                           7                            31
D46V8, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          26                            90
  CLUS_2                          31                            55
  CLUS_3                           9                            46
D46V9, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          34                           109
  CLUS_2                          36                           114
  CLUS_3                          14                            24
D46V10, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          18                            32
  CLUS_2                          41                           132
  CLUS_3                          25                            83

Clustering(47) Variable = Del Peak 16(6q26) mutation analysis
D47V1, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         9                          34
  CLUS_2                        20                          30
  CLUS_3                         5                          25
  CLUS_4                         6                          25
D47V2, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         4                          24
  CLUS_2                        23                          31
  CLUS_3                        13                          59
D47V3, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        26                         103
  CLUS_2                        41                          71
  CLUS_3                        26                          91
D47V4, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        18                          72
  CLUS_2                        32                          43
  CLUS_3                        11                          48
D47V5, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        19                          41
  CLUS_2                        21                          51
  CLUS_3                        17                          45
D47V6, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        15                          32
  CLUS_2                        12                          36
  CLUS_3                        17                          41
  CLUS_4                        13                          28
D47V7, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        11                          49
  CLUS_2                        31                          49
  CLUS_3                        23                          56
  CLUS_4                        10                          28
D47V8, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        29                          87
  CLUS_2                        32                          54
  CLUS_3                        14                          41
D47V9, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        43                         100
  CLUS_2                        32                         118
  CLUS_3                        10                          28
D47V10, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        19                          31
  CLUS_2                        41                         132
  CLUS_3                        25                          83

Clustering(48) Variable = Del Peak 17(7q11.22) mutation analysis
D48V1, multiclass
        clus
vv       DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE
  CLUS_1                            4                             39
  CLUS_2                            3                             47
  CLUS_3                            2                             28
  CLUS_4                            3                             28
D48V2, multiclass
        clus
vv       DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE
  CLUS_1                            4                             24
  CLUS_2                            3                             51
  CLUS_3                            5                             67
D48V3, multiclass
        clus
vv       DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE
  CLUS_1                           11                            118
  CLUS_2                            3                            109
  CLUS_3                           21                             96
D48V4, multiclass
        clus
vv       DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE
  CLUS_1                           12                             78
  CLUS_2                            5                             70
  CLUS_3                            6                             53
D48V5, multiclass
        clus
vv       DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE
  CLUS_1                            7                             53
  CLUS_2                            8                             64
  CLUS_3                            6                             56
D48V6, multiclass
        clus
vv       DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE
  CLUS_1                            5                             42
  CLUS_2                            5                             43
  CLUS_3                            8                             50
  CLUS_4                            3                             38
D48V7, multiclass
        clus
vv       DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE
  CLUS_1                            3                             57
  CLUS_2                            4                             76
  CLUS_3                           13                             66
  CLUS_4                            5                             33
D48V8, multiclass
        clus
vv       DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE
  CLUS_1                           10                            106
  CLUS_2                            5                             81
  CLUS_3                           10                             45
D48V9, multiclass
        clus
vv       DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE
  CLUS_1                           12                            131
  CLUS_2                           16                            134
  CLUS_3                            4                             34
D48V10, multiclass
        clus
vv       DEL PEAK 17(7Q11.22) MUTATED DEL PEAK 17(7Q11.22) WILD-TYPE
  CLUS_1                            4                             46
  CLUS_2                           20                            153
  CLUS_3                            8                            100

Clustering(49) Variable = Del Peak 18(7q36.1) mutation analysis
D49V1, multiclass
        clus
vv       DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE
  CLUS_1                          12                            31
  CLUS_2                           8                            42
  CLUS_3                           6                            24
  CLUS_4                           4                            27
D49V2, multiclass
        clus
vv       DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE
  CLUS_1                           6                            22
  CLUS_2                           8                            46
  CLUS_3                          16                            56
D49V3, multiclass
        clus
vv       DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE
  CLUS_1                          33                            96
  CLUS_2                          13                            99
  CLUS_3                          27                            90
D49V4, multiclass
        clus
vv       DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE
  CLUS_1                          24                            66
  CLUS_2                          14                            61
  CLUS_3                          11                            48
D49V5, multiclass
        clus
vv       DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE
  CLUS_1                          12                            48
  CLUS_2                          15                            57
  CLUS_3                          13                            49
D49V6, multiclass
        clus
vv       DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE
  CLUS_1                           9                            38
  CLUS_2                           8                            40
  CLUS_3                          17                            41
  CLUS_4                           6                            35
D49V7, multiclass
        clus
vv       DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE
  CLUS_1                          14                            46
  CLUS_2                          12                            68
  CLUS_3                          21                            58
  CLUS_4                           4                            34
D49V8, multiclass
        clus
vv       DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE
  CLUS_1                          26                            90
  CLUS_2                          13                            73
  CLUS_3                          12                            43
D49V9, multiclass
        clus
vv       DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE
  CLUS_1                          29                           114
  CLUS_2                          31                           119
  CLUS_3                           4                            34
D49V10, multiclass
        clus
vv       DEL PEAK 18(7Q36.1) MUTATED DEL PEAK 18(7Q36.1) WILD-TYPE
  CLUS_1                           8                            42
  CLUS_2                          34                           139
  CLUS_3                          22                            86

Clustering(50) Variable = Del Peak 19(8p23.2) mutation analysis
D50V1, multiclass
        clus
vv       DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE
  CLUS_1                          28                            15
  CLUS_2                          36                            14
  CLUS_3                          20                            10
  CLUS_4                          20                            11
D50V2, multiclass
        clus
vv       DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE
  CLUS_1                          21                             7
  CLUS_2                          38                            16
  CLUS_3                          45                            27
D50V3, multiclass
        clus
vv       DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE
  CLUS_1                          74                            55
  CLUS_2                          80                            32
  CLUS_3                          89                            28
D50V4, multiclass
        clus
vv       DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE
  CLUS_1                          57                            33
  CLUS_2                          56                            19
  CLUS_3                          39                            20
D50V5, multiclass
        clus
vv       DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE
  CLUS_1                          44                            16
  CLUS_2                          52                            20
  CLUS_3                          39                            23
D50V6, multiclass
        clus
vv       DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE
  CLUS_1                          36                            11
  CLUS_2                          35                            13
  CLUS_3                          41                            17
  CLUS_4                          23                            18
D50V7, multiclass
        clus
vv       DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE
  CLUS_1                          36                            24
  CLUS_2                          62                            18
  CLUS_3                          54                            25
  CLUS_4                          25                            13
D50V8, multiclass
        clus
vv       DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE
  CLUS_1                          76                            40
  CLUS_2                          67                            19
  CLUS_3                          34                            21
D50V9, multiclass
        clus
vv       DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE
  CLUS_1                         102                            41
  CLUS_2                          97                            53
  CLUS_3                          27                            11
D50V10, multiclass
        clus
vv       DEL PEAK 19(8P23.2) MUTATED DEL PEAK 19(8P23.2) WILD-TYPE
  CLUS_1                          34                            16
  CLUS_2                         111                            62
  CLUS_3                          81                            27

Clustering(51) Variable = Del Peak 20(9p23) mutation analysis
D51V1, multiclass
        clus
vv       DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE
  CLUS_1                        37                           6
  CLUS_2                        28                          22
  CLUS_3                        19                          11
  CLUS_4                        17                          14
D51V2, multiclass
        clus
vv       DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE
  CLUS_1                        14                          14
  CLUS_2                        30                          24
  CLUS_3                        57                          15
D51V3, multiclass
        clus
vv       DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE
  CLUS_1                        68                          61
  CLUS_2                        67                          45
  CLUS_3                        99                          18
D51V4, multiclass
        clus
vv       DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE
  CLUS_1                        52                          38
  CLUS_2                        50                          25
  CLUS_3                        44                          15
D51V5, multiclass
        clus
vv       DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE
  CLUS_1                        32                          28
  CLUS_2                        46                          26
  CLUS_3                        44                          18
D51V6, multiclass
        clus
vv       DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE
  CLUS_1                        32                          15
  CLUS_2                        34                          14
  CLUS_3                        30                          28
  CLUS_4                        26                          15
D51V7, multiclass
        clus
vv       DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE
  CLUS_1                        47                          13
  CLUS_2                        45                          35
  CLUS_3                        53                          26
  CLUS_4                        21                          17
D51V8, multiclass
        clus
vv       DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE
  CLUS_1                        82                          34
  CLUS_2                        48                          38
  CLUS_3                        36                          19
D51V9, multiclass
        clus
vv       DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE
  CLUS_1                        95                          48
  CLUS_2                        99                          51
  CLUS_3                        25                          13
D51V10, multiclass
        clus
vv       DEL PEAK 20(9P23) MUTATED DEL PEAK 20(9P23) WILD-TYPE
  CLUS_1                        28                          22
  CLUS_2                       112                          61
  CLUS_3                        79                          29

Clustering(52) Variable = Del Peak 21(9p21.3) mutation analysis
D52V1, multiclass
        clus
vv       DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE
  CLUS_1                          36                             7
  CLUS_2                          37                            13
  CLUS_3                          21                             9
  CLUS_4                          21                            10
D52V2, multiclass
        clus
vv       DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE
  CLUS_1                          17                            11
  CLUS_2                          41                            13
  CLUS_3                          57                            15
D52V3, multiclass
        clus
vv       DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE
  CLUS_1                          81                            48
  CLUS_2                          86                            26
  CLUS_3                         105                            12
D52V4, multiclass
        clus
vv       DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE
  CLUS_1                          66                            24
  CLUS_2                          59                            16
  CLUS_3                          48                            11
D52V5, multiclass
        clus
vv       DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE
  CLUS_1                          45                            15
  CLUS_2                          52                            20
  CLUS_3                          49                            13
D52V6, multiclass
        clus
vv       DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE
  CLUS_1                          36                            11
  CLUS_2                          40                             8
  CLUS_3                          40                            18
  CLUS_4                          30                            11
D52V7, multiclass
        clus
vv       DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE
  CLUS_1                          51                             9
  CLUS_2                          59                            21
  CLUS_3                          60                            19
  CLUS_4                          25                            13
D52V8, multiclass
        clus
vv       DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE
  CLUS_1                          90                            26
  CLUS_2                          64                            22
  CLUS_3                          41                            14
D52V9, multiclass
        clus
vv       DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE
  CLUS_1                         110                            33
  CLUS_2                         115                            35
  CLUS_3                          31                             7
D52V10, multiclass
        clus
vv       DEL PEAK 21(9P21.3) MUTATED DEL PEAK 21(9P21.3) WILD-TYPE
  CLUS_1                          35                            15
  CLUS_2                         134                            39
  CLUS_3                          87                            21

Clustering(53) Variable = Del Peak 22(9q21.11) mutation analysis
D53V1, multiclass
        clus
vv       DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE
  CLUS_1                           28                             15
  CLUS_2                           12                             38
  CLUS_3                           19                             11
  CLUS_4                           15                             16
D53V2, multiclass
        clus
vv       DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE
  CLUS_1                           16                             12
  CLUS_2                           13                             41
  CLUS_3                           45                             27
D53V3, multiclass
        clus
vv       DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE
  CLUS_1                           62                             67
  CLUS_2                           34                             78
  CLUS_3                           78                             39
D53V4, multiclass
        clus
vv       DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE
  CLUS_1                           49                             41
  CLUS_2                           19                             56
  CLUS_3                           40                             19
D53V5, multiclass
        clus
vv       DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           37                             35
  CLUS_3                           26                             36
D53V6, multiclass
        clus
vv       DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE
  CLUS_1                           28                             19
  CLUS_2                           22                             26
  CLUS_3                           23                             35
  CLUS_4                           19                             22
D53V7, multiclass
        clus
vv       DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE
  CLUS_1                           33                             27
  CLUS_2                           19                             61
  CLUS_3                           48                             31
  CLUS_4                           22                             16
D53V8, multiclass
        clus
vv       DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE
  CLUS_1                           64                             52
  CLUS_2                           21                             65
  CLUS_3                           37                             18
D53V9, multiclass
        clus
vv       DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE
  CLUS_1                           68                             75
  CLUS_2                           81                             69
  CLUS_3                           12                             26
D53V10, multiclass
        clus
vv       DEL PEAK 22(9Q21.11) MUTATED DEL PEAK 22(9Q21.11) WILD-TYPE
  CLUS_1                           10                             40
  CLUS_2                           90                             83
  CLUS_3                           61                             47

Clustering(54) Variable = Del Peak 23(10p15.3) mutation analysis
D54V1, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           17                             26
  CLUS_2                           25                             25
  CLUS_3                           10                             20
  CLUS_4                           16                             15
D54V2, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           13                             15
  CLUS_2                           27                             27
  CLUS_3                           28                             44
D54V3, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           43                             86
  CLUS_2                           63                             49
  CLUS_3                           54                             63
D54V4, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           33                             57
  CLUS_2                           48                             27
  CLUS_3                           23                             36
D54V5, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           28                             44
  CLUS_3                           31                             31
D54V6, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           19                             28
  CLUS_2                           26                             22
  CLUS_3                           23                             35
  CLUS_4                           16                             25
D54V7, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           47                             33
  CLUS_3                           33                             46
  CLUS_4                           13                             25
D54V8, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           40                             76
  CLUS_2                           47                             39
  CLUS_3                           24                             31
D54V9, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           67                             76
  CLUS_2                           62                             88
  CLUS_3                           23                             15
D54V10, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           32                             18
  CLUS_2                           65                            108
  CLUS_3                           55                             53

Clustering(55) Variable = Del Peak 24(10q23.31) mutation analysis
D55V1, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            18                              25
  CLUS_2                            34                              16
  CLUS_3                            13                              17
  CLUS_4                            14                              17
D55V2, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            14                              14
  CLUS_2                            37                              17
  CLUS_3                            28                              44
D55V3, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            53                              76
  CLUS_2                            75                              37
  CLUS_3                            56                              61
D55V4, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            33                              57
  CLUS_2                            53                              22
  CLUS_3                            30                              29
D55V5, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            31                              29
  CLUS_2                            30                              42
  CLUS_3                            34                              28
D55V6, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            21                              26
  CLUS_2                            29                              19
  CLUS_3                            25                              33
  CLUS_4                            20                              21
D55V7, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            22                              38
  CLUS_2                            57                              23
  CLUS_3                            35                              44
  CLUS_4                            16                              22
D55V8, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            42                              74
  CLUS_2                            59                              27
  CLUS_3                            29                              26
D55V9, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            72                              71
  CLUS_2                            74                              76
  CLUS_3                            23                              15
D55V10, multiclass
        clus
vv       DEL PEAK 24(10Q23.31) MUTATED DEL PEAK 24(10Q23.31) WILD-TYPE
  CLUS_1                            32                              18
  CLUS_2                            77                              96
  CLUS_3                            60                              48

Clustering(56) Variable = Del Peak 25(11p15.5) mutation analysis
D56V1, multiclass
        clus
vv       DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE
  CLUS_1                           31                             12
  CLUS_2                           19                             31
  CLUS_3                            9                             21
  CLUS_4                           18                             13
D56V2, multiclass
        clus
vv       DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE
  CLUS_1                           17                             11
  CLUS_2                           20                             34
  CLUS_3                           40                             32
D56V3, multiclass
        clus
vv       DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE
  CLUS_1                           47                             82
  CLUS_2                           51                             61
  CLUS_3                           75                             42
D56V4, multiclass
        clus
vv       DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE
  CLUS_1                           40                             50
  CLUS_2                           28                             47
  CLUS_3                           37                             22
D56V5, multiclass
        clus
vv       DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE
  CLUS_1                           32                             28
  CLUS_2                           43                             29
  CLUS_3                           17                             45
D56V6, multiclass
        clus
vv       DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE
  CLUS_1                           35                             12
  CLUS_2                           17                             31
  CLUS_3                           29                             29
  CLUS_4                           11                             30
D56V7, multiclass
        clus
vv       DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE
  CLUS_1                           34                             26
  CLUS_2                           30                             50
  CLUS_3                           47                             32
  CLUS_4                           16                             22
D56V8, multiclass
        clus
vv       DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE
  CLUS_1                           62                             54
  CLUS_2                           33                             53
  CLUS_3                           32                             23
D56V9, multiclass
        clus
vv       DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE
  CLUS_1                           76                             67
  CLUS_2                           76                             74
  CLUS_3                           11                             27
D56V10, multiclass
        clus
vv       DEL PEAK 25(11P15.5) MUTATED DEL PEAK 25(11P15.5) WILD-TYPE
  CLUS_1                           16                             34
  CLUS_2                           90                             83
  CLUS_3                           57                             51

Clustering(57) Variable = Del Peak 26(11q22.1) mutation analysis
D57V1, multiclass
        clus
vv       DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE
  CLUS_1                           10                             33
  CLUS_2                           17                             33
  CLUS_3                            8                             22
  CLUS_4                            6                             25
D57V2, multiclass
        clus
vv       DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE
  CLUS_1                            4                             24
  CLUS_2                           16                             38
  CLUS_3                           21                             51
D57V3, multiclass
        clus
vv       DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE
  CLUS_1                           26                            103
  CLUS_2                           45                             67
  CLUS_3                           37                             80
D57V4, multiclass
        clus
vv       DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE
  CLUS_1                           22                             68
  CLUS_2                           29                             46
  CLUS_3                           23                             36
D57V5, multiclass
        clus
vv       DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE
  CLUS_1                           20                             40
  CLUS_2                           19                             53
  CLUS_3                           10                             52
D57V6, multiclass
        clus
vv       DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE
  CLUS_1                           12                             35
  CLUS_2                           11                             37
  CLUS_3                           15                             43
  CLUS_4                           11                             30
D57V7, multiclass
        clus
vv       DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE
  CLUS_1                           13                             47
  CLUS_2                           27                             53
  CLUS_3                           23                             56
  CLUS_4                            7                             31
D57V8, multiclass
        clus
vv       DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE
  CLUS_1                           27                             89
  CLUS_2                           27                             59
  CLUS_3                           16                             39
D57V9, multiclass
        clus
vv       DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE
  CLUS_1                           38                            105
  CLUS_2                           48                            102
  CLUS_3                           15                             23
D57V10, multiclass
        clus
vv       DEL PEAK 26(11Q22.1) MUTATED DEL PEAK 26(11Q22.1) WILD-TYPE
  CLUS_1                           22                             28
  CLUS_2                           45                            128
  CLUS_3                           34                             74

Clustering(58) Variable = Del Peak 27(11q25) mutation analysis
D58V1, multiclass
        clus
vv       DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE
  CLUS_1                         15                           28
  CLUS_2                         20                           30
  CLUS_3                         11                           19
  CLUS_4                          9                           22
D58V2, multiclass
        clus
vv       DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE
  CLUS_1                          7                           21
  CLUS_2                         20                           34
  CLUS_3                         28                           44
D58V3, multiclass
        clus
vv       DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE
  CLUS_1                         38                           91
  CLUS_2                         52                           60
  CLUS_3                         41                           76
D58V4, multiclass
        clus
vv       DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE
  CLUS_1                         29                           61
  CLUS_2                         32                           43
  CLUS_3                         22                           37
D58V5, multiclass
        clus
vv       DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE
  CLUS_1                         25                           35
  CLUS_2                         21                           51
  CLUS_3                         15                           47
D58V6, multiclass
        clus
vv       DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE
  CLUS_1                         13                           34
  CLUS_2                         16                           32
  CLUS_3                         20                           38
  CLUS_4                         12                           29
D58V7, multiclass
        clus
vv       DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE
  CLUS_1                         17                           43
  CLUS_2                         33                           47
  CLUS_3                         30                           49
  CLUS_4                         13                           25
D58V8, multiclass
        clus
vv       DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE
  CLUS_1                         37                           79
  CLUS_2                         35                           51
  CLUS_3                         21                           34
D58V9, multiclass
        clus
vv       DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE
  CLUS_1                         45                           98
  CLUS_2                         55                           95
  CLUS_3                         18                           20
D58V10, multiclass
        clus
vv       DEL PEAK 27(11Q25) MUTATED DEL PEAK 27(11Q25) WILD-TYPE
  CLUS_1                         23                           27
  CLUS_2                         55                          118
  CLUS_3                         40                           68

Clustering(59) Variable = Del Peak 28(12q24.31) mutation analysis
D59V1, multiclass
        clus
vv       DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE
  CLUS_1                             5                              38
  CLUS_2                             8                              42
  CLUS_3                             4                              26
  CLUS_4                             4                              27
D59V2, multiclass
        clus
vv       DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE
  CLUS_1                             4                              24
  CLUS_2                            10                              44
  CLUS_3                             7                              65
D59V3, multiclass
        clus
vv       DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE
  CLUS_1                            18                             111
  CLUS_2                            21                              91
  CLUS_3                            18                              99
D59V4, multiclass
        clus
vv       DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE
  CLUS_1                            15                              75
  CLUS_2                             9                              66
  CLUS_3                            13                              46
D59V5, multiclass
        clus
vv       DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE
  CLUS_1                             6                              54
  CLUS_2                            10                              62
  CLUS_3                            12                              50
D59V6, multiclass
        clus
vv       DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE
  CLUS_1                             9                              38
  CLUS_2                             9                              39
  CLUS_3                             4                              54
  CLUS_4                             6                              35
D59V7, multiclass
        clus
vv       DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE
  CLUS_1                            11                              49
  CLUS_2                            12                              68
  CLUS_3                            14                              65
  CLUS_4                             5                              33
D59V8, multiclass
        clus
vv       DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE
  CLUS_1                            18                              98
  CLUS_2                            13                              73
  CLUS_3                            11                              44
D59V9, multiclass
        clus
vv       DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE
  CLUS_1                            19                             124
  CLUS_2                            30                             120
  CLUS_3                             3                              35
D59V10, multiclass
        clus
vv       DEL PEAK 28(12Q24.31) MUTATED DEL PEAK 28(12Q24.31) WILD-TYPE
  CLUS_1                             7                              43
  CLUS_2                            23                             150
  CLUS_3                            22                              86

Clustering(60) Variable = Del Peak 29(13q12.11) mutation analysis
D60V1, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            26                              17
  CLUS_2                            35                              15
  CLUS_3                            24                               6
  CLUS_4                            15                              16
D60V2, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            16                              12
  CLUS_2                            37                              17
  CLUS_3                            47                              25
D60V3, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            79                              50
  CLUS_2                            72                              40
  CLUS_3                            89                              28
D60V4, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            55                              35
  CLUS_2                            49                              26
  CLUS_3                            45                              14
D60V5, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            41                              19
  CLUS_2                            49                              23
  CLUS_3                            43                              19
D60V6, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            33                              14
  CLUS_2                            38                              10
  CLUS_3                            38                              20
  CLUS_4                            24                              17
D60V7, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            36                              24
  CLUS_2                            54                              26
  CLUS_3                            52                              27
  CLUS_4                            27                              11
D60V8, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            70                              46
  CLUS_2                            62                              24
  CLUS_3                            37                              18
D60V9, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            95                              48
  CLUS_2                           102                              48
  CLUS_3                            26                              12
D60V10, multiclass
        clus
vv       DEL PEAK 29(13Q12.11) MUTATED DEL PEAK 29(13Q12.11) WILD-TYPE
  CLUS_1                            34                              16
  CLUS_2                           117                              56
  CLUS_3                            72                              36

Clustering(61) Variable = Del Peak 30(13q14.2) mutation analysis
D61V1, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           28                             15
  CLUS_2                           29                             21
  CLUS_3                           26                              4
  CLUS_4                           22                              9
D61V2, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           22                              6
  CLUS_2                           31                             23
  CLUS_3                           52                             20
D61V3, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           81                             48
  CLUS_2                           73                             39
  CLUS_3                           97                             20
D61V4, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           56                             34
  CLUS_2                           53                             22
  CLUS_3                           46                             13
D61V5, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           43                             17
  CLUS_2                           49                             23
  CLUS_3                           45                             17
D61V6, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           34                             13
  CLUS_2                           37                             11
  CLUS_3                           40                             18
  CLUS_4                           26                             15
D61V7, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           35                             25
  CLUS_2                           48                             32
  CLUS_3                           61                             18
  CLUS_4                           29                              9
D61V8, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           74                             42
  CLUS_2                           56                             30
  CLUS_3                           43                             12
D61V9, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           97                             46
  CLUS_2                          109                             41
  CLUS_3                           26                             12
D61V10, multiclass
        clus
vv       DEL PEAK 30(13Q14.2) MUTATED DEL PEAK 30(13Q14.2) WILD-TYPE
  CLUS_1                           34                             16
  CLUS_2                          118                             55
  CLUS_3                           80                             28

Clustering(62) Variable = Del Peak 31(14q11.2) mutation analysis
D62V1, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                            8                             35
  CLUS_2                           20                             30
  CLUS_3                           13                             17
  CLUS_4                           13                             18
D62V2, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           10                             18
  CLUS_2                           23                             31
  CLUS_3                           21                             51
D62V3, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           36                             93
  CLUS_2                           44                             68
  CLUS_3                           50                             67
D62V4, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           31                             59
  CLUS_2                           26                             49
  CLUS_3                           27                             32
D62V5, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           22                             50
  CLUS_3                           24                             38
D62V6, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           12                             35
  CLUS_2                           17                             31
  CLUS_3                           27                             31
  CLUS_4                           17                             24
D62V7, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           12                             48
  CLUS_2                           30                             50
  CLUS_3                           40                             39
  CLUS_4                           13                             25
D62V8, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           33                             83
  CLUS_2                           31                             55
  CLUS_3                           31                             24
D62V9, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           51                             92
  CLUS_2                           52                             98
  CLUS_3                           18                             20
D62V10, multiclass
        clus
vv       DEL PEAK 31(14Q11.2) MUTATED DEL PEAK 31(14Q11.2) WILD-TYPE
  CLUS_1                           23                             27
  CLUS_2                           56                            117
  CLUS_3                           42                             66

Clustering(63) Variable = Del Peak 32(15q12) mutation analysis
D63V1, multiclass
        clus
vv       DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE
  CLUS_1                         15                           28
  CLUS_2                         20                           30
  CLUS_3                         12                           18
  CLUS_4                         15                           16
D63V2, multiclass
        clus
vv       DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE
  CLUS_1                         15                           13
  CLUS_2                         22                           32
  CLUS_3                         25                           47
D63V3, multiclass
        clus
vv       DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE
  CLUS_1                         39                           90
  CLUS_2                         44                           68
  CLUS_3                         39                           78
D63V4, multiclass
        clus
vv       DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE
  CLUS_1                         29                           61
  CLUS_2                         19                           56
  CLUS_3                         22                           37
D63V5, multiclass
        clus
vv       DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE
  CLUS_1                         29                           31
  CLUS_2                         24                           48
  CLUS_3                         18                           44
D63V6, multiclass
        clus
vv       DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE
  CLUS_1                         18                           29
  CLUS_2                         21                           27
  CLUS_3                         26                           32
  CLUS_4                          6                           35
D63V7, multiclass
        clus
vv       DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE
  CLUS_1                         18                           42
  CLUS_2                         27                           53
  CLUS_3                         36                           43
  CLUS_4                         10                           28
D63V8, multiclass
        clus
vv       DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE
  CLUS_1                         38                           78
  CLUS_2                         29                           57
  CLUS_3                         24                           31
D63V9, multiclass
        clus
vv       DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE
  CLUS_1                         58                           85
  CLUS_2                         45                          105
  CLUS_3                         10                           28
D63V10, multiclass
        clus
vv       DEL PEAK 32(15Q12) MUTATED DEL PEAK 32(15Q12) WILD-TYPE
  CLUS_1                         15                           35
  CLUS_2                         62                          111
  CLUS_3                         36                           72

Clustering(64) Variable = Del Peak 33(16p13.3) mutation analysis
D64V1, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           16                             27
  CLUS_2                           21                             29
  CLUS_3                            6                             24
  CLUS_4                           11                             20
D64V2, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                            6                             22
  CLUS_2                           20                             34
  CLUS_3                           28                             44
D64V3, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           33                             96
  CLUS_2                           42                             70
  CLUS_3                           54                             63
D64V4, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           32                             58
  CLUS_2                           26                             49
  CLUS_3                           27                             32
D64V5, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           27                             33
  CLUS_2                           26                             46
  CLUS_3                           17                             45
D64V6, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           19                             28
  CLUS_2                           14                             34
  CLUS_3                           24                             34
  CLUS_4                           13                             28
D64V7, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           17                             43
  CLUS_2                           30                             50
  CLUS_3                           30                             49
  CLUS_4                           11                             27
D64V8, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           34                             82
  CLUS_2                           31                             55
  CLUS_3                           23                             32
D64V9, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           47                             96
  CLUS_2                           57                             93
  CLUS_3                           14                             24
D64V10, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           12                             38
  CLUS_2                           64                            109
  CLUS_3                           42                             66

Clustering(65) Variable = Del Peak 34(16q23.1) mutation analysis
D65V1, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           16                             27
  CLUS_2                           21                             29
  CLUS_3                           11                             19
  CLUS_4                           13                             18
D65V2, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           10                             18
  CLUS_2                           24                             30
  CLUS_3                           27                             45
D65V3, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           41                             88
  CLUS_2                           50                             62
  CLUS_3                           53                             64
D65V4, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           34                             56
  CLUS_2                           26                             49
  CLUS_3                           28                             31
D65V5, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           29                             31
  CLUS_2                           26                             46
  CLUS_3                           24                             38
D65V6, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           17                             30
  CLUS_2                           21                             27
  CLUS_3                           25                             33
  CLUS_4                           16                             25
D65V7, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           18                             42
  CLUS_2                           35                             45
  CLUS_3                           35                             44
  CLUS_4                           12                             26
D65V8, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           35                             81
  CLUS_2                           38                             48
  CLUS_3                           27                             28
D65V9, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           57                             86
  CLUS_2                           58                             92
  CLUS_3                           19                             19
D65V10, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           20                             30
  CLUS_2                           66                            107
  CLUS_3                           48                             60

Clustering(66) Variable = Del Peak 35(17p11.2) mutation analysis
D66V1, multiclass
        clus
vv       DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE
  CLUS_1                           30                             13
  CLUS_2                           25                             25
  CLUS_3                           15                             15
  CLUS_4                           16                             15
D66V2, multiclass
        clus
vv       DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE
  CLUS_1                           13                             15
  CLUS_2                           29                             25
  CLUS_3                           44                             28
D66V3, multiclass
        clus
vv       DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE
  CLUS_1                           57                             72
  CLUS_2                           53                             59
  CLUS_3                           75                             42
D66V4, multiclass
        clus
vv       DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE
  CLUS_1                           41                             49
  CLUS_2                           32                             43
  CLUS_3                           35                             24
D66V5, multiclass
        clus
vv       DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE
  CLUS_1                           35                             25
  CLUS_2                           34                             38
  CLUS_3                           25                             37
D66V6, multiclass
        clus
vv       DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE
  CLUS_1                           26                             21
  CLUS_2                           19                             29
  CLUS_3                           36                             22
  CLUS_4                           13                             28
D66V7, multiclass
        clus
vv       DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE
  CLUS_1                           34                             26
  CLUS_2                           36                             44
  CLUS_3                           41                             38
  CLUS_4                           23                             15
D66V8, multiclass
        clus
vv       DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE
  CLUS_1                           61                             55
  CLUS_2                           43                             43
  CLUS_3                           30                             25
D66V9, multiclass
        clus
vv       DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE
  CLUS_1                           85                             58
  CLUS_2                           73                             77
  CLUS_3                           16                             22
D66V10, multiclass
        clus
vv       DEL PEAK 35(17P11.2) MUTATED DEL PEAK 35(17P11.2) WILD-TYPE
  CLUS_1                           19                             31
  CLUS_2                          102                             71
  CLUS_3                           53                             55

Clustering(67) Variable = Del Peak 36(17q11.2) mutation analysis
D67V1, multiclass
        clus
vv       DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE
  CLUS_1                           21                             22
  CLUS_2                            3                             47
  CLUS_3                           11                             19
  CLUS_4                            7                             24
D67V2, multiclass
        clus
vv       DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE
  CLUS_1                            9                             19
  CLUS_2                            4                             50
  CLUS_3                           29                             43
D67V3, multiclass
        clus
vv       DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE
  CLUS_1                           34                             95
  CLUS_2                            8                            104
  CLUS_3                           47                             70
D67V4, multiclass
        clus
vv       DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE
  CLUS_1                           23                             67
  CLUS_2                           10                             65
  CLUS_3                           17                             42
D67V5, multiclass
        clus
vv       DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE
  CLUS_1                           11                             49
  CLUS_2                           20                             52
  CLUS_3                           15                             47
D67V6, multiclass
        clus
vv       DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE
  CLUS_1                           13                             34
  CLUS_2                            8                             40
  CLUS_3                           14                             44
  CLUS_4                           11                             30
D67V7, multiclass
        clus
vv       DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE
  CLUS_1                           20                             40
  CLUS_2                            6                             74
  CLUS_3                           23                             56
  CLUS_4                           13                             25
D67V8, multiclass
        clus
vv       DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE
  CLUS_1                           39                             77
  CLUS_2                            6                             80
  CLUS_3                           17                             38
D67V9, multiclass
        clus
vv       DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE
  CLUS_1                           42                            101
  CLUS_2                           35                            115
  CLUS_3                            8                             30
D67V10, multiclass
        clus
vv       DEL PEAK 36(17Q11.2) MUTATED DEL PEAK 36(17Q11.2) WILD-TYPE
  CLUS_1                            5                             45
  CLUS_2                           49                            124
  CLUS_3                           31                             77

Clustering(68) Variable = Del Peak 37(17q25.3) mutation analysis
D68V1, multiclass
        clus
vv       DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE
  CLUS_1                           15                             28
  CLUS_2                            4                             46
  CLUS_3                            7                             23
  CLUS_4                            3                             28
D68V2, multiclass
        clus
vv       DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE
  CLUS_1                            7                             21
  CLUS_2                            4                             50
  CLUS_3                           18                             54
D68V3, multiclass
        clus
vv       DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE
  CLUS_1                           22                            107
  CLUS_2                           11                            101
  CLUS_3                           35                             82
D68V4, multiclass
        clus
vv       DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE
  CLUS_1                           14                             76
  CLUS_2                           11                             64
  CLUS_3                           17                             42
D68V5, multiclass
        clus
vv       DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE
  CLUS_1                           12                             48
  CLUS_2                           15                             57
  CLUS_3                           10                             52
D68V6, multiclass
        clus
vv       DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE
  CLUS_1                           10                             37
  CLUS_2                            9                             39
  CLUS_3                           11                             47
  CLUS_4                            7                             34
D68V7, multiclass
        clus
vv       DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE
  CLUS_1                           15                             45
  CLUS_2                            7                             73
  CLUS_3                           17                             62
  CLUS_4                            8                             30
D68V8, multiclass
        clus
vv       DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE
  CLUS_1                           32                             84
  CLUS_2                            6                             80
  CLUS_3                            9                             46
D68V9, multiclass
        clus
vv       DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE
  CLUS_1                           28                            115
  CLUS_2                           32                            118
  CLUS_3                            5                             33
D68V10, multiclass
        clus
vv       DEL PEAK 37(17Q25.3) MUTATED DEL PEAK 37(17Q25.3) WILD-TYPE
  CLUS_1                            3                             47
  CLUS_2                           42                            131
  CLUS_3                           20                             88

Clustering(69) Variable = Del Peak 38(18q23) mutation analysis
D69V1, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         24                           19
  CLUS_2                         23                           27
  CLUS_3                         13                           17
  CLUS_4                         12                           19
D69V2, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         12                           16
  CLUS_2                         24                           30
  CLUS_3                         36                           36
D69V3, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         54                           75
  CLUS_2                         53                           59
  CLUS_3                         57                           60
D69V4, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         42                           48
  CLUS_2                         36                           39
  CLUS_3                         27                           32
D69V5, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         26                           34
  CLUS_2                         33                           39
  CLUS_3                         30                           32
D69V6, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         24                           23
  CLUS_2                         26                           22
  CLUS_3                         23                           35
  CLUS_4                         16                           25
D69V7, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         28                           32
  CLUS_2                         35                           45
  CLUS_3                         27                           52
  CLUS_4                         20                           18
D69V8, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         57                           59
  CLUS_2                         35                           51
  CLUS_3                         18                           37
D69V9, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         69                           74
  CLUS_2                         67                           83
  CLUS_3                         17                           21
D69V10, multiclass
        clus
vv       DEL PEAK 38(18Q23) MUTATED DEL PEAK 38(18Q23) WILD-TYPE
  CLUS_1                         24                           26
  CLUS_2                         75                           98
  CLUS_3                         54                           54

Clustering(70) Variable = Del Peak 39(19p13.3) mutation analysis
D70V1, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           20                             23
  CLUS_2                           20                             30
  CLUS_3                           17                             13
  CLUS_4                           18                             13
D70V2, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           20                              8
  CLUS_2                           22                             32
  CLUS_3                           33                             39
D70V3, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           46                             83
  CLUS_2                           46                             66
  CLUS_3                           71                             46
D70V4, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           34                             56
  CLUS_2                           33                             42
  CLUS_3                           32                             27
D70V5, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           31                             29
  CLUS_2                           38                             34
  CLUS_3                           22                             40
D70V6, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           27                             20
  CLUS_2                           22                             26
  CLUS_3                           25                             33
  CLUS_4                           17                             24
D70V7, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           26                             34
  CLUS_2                           31                             49
  CLUS_3                           38                             41
  CLUS_4                           23                             15
D70V8, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           48                             68
  CLUS_2                           35                             51
  CLUS_3                           35                             20
D70V9, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           74                             69
  CLUS_2                           67                             83
  CLUS_3                           10                             28
D70V10, multiclass
        clus
vv       DEL PEAK 39(19P13.3) MUTATED DEL PEAK 39(19P13.3) WILD-TYPE
  CLUS_1                           15                             35
  CLUS_2                           82                             91
  CLUS_3                           54                             54

Clustering(71) Variable = Del Peak 40(19q13.33) mutation analysis
D71V1, multiclass
        clus
vv       DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE
  CLUS_1                             9                              34
  CLUS_2                            16                              34
  CLUS_3                             9                              21
  CLUS_4                             7                              24
D71V2, multiclass
        clus
vv       DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE
  CLUS_1                             9                              19
  CLUS_2                            19                              35
  CLUS_3                            13                              59
D71V3, multiclass
        clus
vv       DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE
  CLUS_1                            20                             109
  CLUS_2                            46                              66
  CLUS_3                            30                              87
D71V4, multiclass
        clus
vv       DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE
  CLUS_1                            11                              79
  CLUS_2                            27                              48
  CLUS_3                            21                              38
D71V5, multiclass
        clus
vv       DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE
  CLUS_1                            20                              40
  CLUS_2                            15                              57
  CLUS_3                            17                              45
D71V6, multiclass
        clus
vv       DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE
  CLUS_1                            13                              34
  CLUS_2                            16                              32
  CLUS_3                            13                              45
  CLUS_4                            10                              31
D71V7, multiclass
        clus
vv       DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE
  CLUS_1                            14                              46
  CLUS_2                            26                              54
  CLUS_3                            17                              62
  CLUS_4                            10                              28
D71V8, multiclass
        clus
vv       DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE
  CLUS_1                            25                              91
  CLUS_2                            28                              58
  CLUS_3                            14                              41
D71V9, multiclass
        clus
vv       DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE
  CLUS_1                            33                             110
  CLUS_2                            45                             105
  CLUS_3                             8                              30
D71V10, multiclass
        clus
vv       DEL PEAK 40(19Q13.33) MUTATED DEL PEAK 40(19Q13.33) WILD-TYPE
  CLUS_1                             8                              42
  CLUS_2                            44                             129
  CLUS_3                            34                              74

Clustering(72) Variable = Del Peak 41(19q13.43) mutation analysis
D72V1, multiclass
        clus
vv       DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE
  CLUS_1                             9                              34
  CLUS_2                            14                              36
  CLUS_3                            10                              20
  CLUS_4                             7                              24
D72V2, multiclass
        clus
vv       DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE
  CLUS_1                             9                              19
  CLUS_2                            17                              37
  CLUS_3                            14                              58
D72V3, multiclass
        clus
vv       DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE
  CLUS_1                            20                             109
  CLUS_2                            45                              67
  CLUS_3                            31                              86
D72V4, multiclass
        clus
vv       DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE
  CLUS_1                            12                              78
  CLUS_2                            28                              47
  CLUS_3                            19                              40
D72V5, multiclass
        clus
vv       DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE
  CLUS_1                            18                              42
  CLUS_2                            15                              57
  CLUS_3                            16                              46
D72V6, multiclass
        clus
vv       DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE
  CLUS_1                            13                              34
  CLUS_2                            15                              33
  CLUS_3                            14                              44
  CLUS_4                             7                              34
D72V7, multiclass
        clus
vv       DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE
  CLUS_1                            15                              45
  CLUS_2                            25                              55
  CLUS_3                            16                              63
  CLUS_4                             9                              29
D72V8, multiclass
        clus
vv       DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE
  CLUS_1                            24                              92
  CLUS_2                            28                              58
  CLUS_3                            13                              42
D72V9, multiclass
        clus
vv       DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE
  CLUS_1                            32                             111
  CLUS_2                            46                             104
  CLUS_3                             8                              30
D72V10, multiclass
        clus
vv       DEL PEAK 41(19Q13.43) MUTATED DEL PEAK 41(19Q13.43) WILD-TYPE
  CLUS_1                             9                              41
  CLUS_2                            45                             128
  CLUS_3                            32                              76

Clustering(73) Variable = Del Peak 42(21q11.2) mutation analysis
D73V1, multiclass
        clus
vv       DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE
  CLUS_1                           22                             21
  CLUS_2                           25                             25
  CLUS_3                           14                             16
  CLUS_4                           11                             20
D73V2, multiclass
        clus
vv       DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE
  CLUS_1                            9                             19
  CLUS_2                           26                             28
  CLUS_3                           37                             35
D73V3, multiclass
        clus
vv       DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE
  CLUS_1                           49                             80
  CLUS_2                           64                             48
  CLUS_3                           63                             54
D73V4, multiclass
        clus
vv       DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE
  CLUS_1                           37                             53
  CLUS_2                           44                             31
  CLUS_3                           32                             27
D73V5, multiclass
        clus
vv       DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE
  CLUS_1                           25                             35
  CLUS_2                           32                             40
  CLUS_3                           27                             35
D73V6, multiclass
        clus
vv       DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE
  CLUS_1                           22                             25
  CLUS_2                           21                             27
  CLUS_3                           23                             35
  CLUS_4                           18                             23
D73V7, multiclass
        clus
vv       DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE
  CLUS_1                           30                             30
  CLUS_2                           39                             41
  CLUS_3                           41                             38
  CLUS_4                           17                             21
D73V8, multiclass
        clus
vv       DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE
  CLUS_1                           54                             62
  CLUS_2                           42                             44
  CLUS_3                           31                             24
D73V9, multiclass
        clus
vv       DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE
  CLUS_1                           76                             67
  CLUS_2                           75                             75
  CLUS_3                           14                             24
D73V10, multiclass
        clus
vv       DEL PEAK 42(21Q11.2) MUTATED DEL PEAK 42(21Q11.2) WILD-TYPE
  CLUS_1                           20                             30
  CLUS_2                           86                             87
  CLUS_3                           59                             49

Clustering(74) Variable = Del Peak 43(21q22.3) mutation analysis
D74V1, multiclass
        clus
vv       DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE
  CLUS_1                           26                             17
  CLUS_2                           32                             18
  CLUS_3                           18                             12
  CLUS_4                           18                             13
D74V2, multiclass
        clus
vv       DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE
  CLUS_1                           13                             15
  CLUS_2                           36                             18
  CLUS_3                           45                             27
D74V3, multiclass
        clus
vv       DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE
  CLUS_1                           48                             81
  CLUS_2                           82                             30
  CLUS_3                           75                             42
D74V4, multiclass
        clus
vv       DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE
  CLUS_1                           38                             52
  CLUS_2                           53                             22
  CLUS_3                           33                             26
D74V5, multiclass
        clus
vv       DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE
  CLUS_1                           34                             26
  CLUS_2                           42                             30
  CLUS_3                           30                             32
D74V6, multiclass
        clus
vv       DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE
  CLUS_1                           29                             18
  CLUS_2                           31                             17
  CLUS_3                           27                             31
  CLUS_4                           19                             22
D74V7, multiclass
        clus
vv       DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE
  CLUS_1                           36                             24
  CLUS_2                           51                             29
  CLUS_3                           43                             36
  CLUS_4                           20                             18
D74V8, multiclass
        clus
vv       DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE
  CLUS_1                           64                             52
  CLUS_2                           56                             30
  CLUS_3                           30                             25
D74V9, multiclass
        clus
vv       DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE
  CLUS_1                           97                             46
  CLUS_2                           77                             73
  CLUS_3                           19                             19
D74V10, multiclass
        clus
vv       DEL PEAK 43(21Q22.3) MUTATED DEL PEAK 43(21Q22.3) WILD-TYPE
  CLUS_1                           29                             21
  CLUS_2                           96                             77
  CLUS_3                           68                             40

Clustering(75) Variable = Del Peak 44(22q11.21) mutation analysis
D75V1, multiclass
        clus
vv       DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE
  CLUS_1                             5                              38
  CLUS_2                            10                              40
  CLUS_3                             8                              22
  CLUS_4                            11                              20
D75V2, multiclass
        clus
vv       DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE
  CLUS_1                            12                              16
  CLUS_2                            12                              42
  CLUS_3                            10                              62
D75V3, multiclass
        clus
vv       DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE
  CLUS_1                            29                             100
  CLUS_2                            16                              96
  CLUS_3                            17                             100
D75V4, multiclass
        clus
vv       DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE
  CLUS_1                            17                              73
  CLUS_2                             8                              67
  CLUS_3                             8                              51
D75V5, multiclass
        clus
vv       DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE
  CLUS_1                            14                              46
  CLUS_2                            12                              60
  CLUS_3                             6                              56
D75V6, multiclass
        clus
vv       DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE
  CLUS_1                             8                              39
  CLUS_2                             5                              43
  CLUS_3                            15                              43
  CLUS_4                             4                              37
D75V7, multiclass
        clus
vv       DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE
  CLUS_1                             9                              51
  CLUS_2                            13                              67
  CLUS_3                            17                              62
  CLUS_4                             9                              29
D75V8, multiclass
        clus
vv       DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE
  CLUS_1                            20                              96
  CLUS_2                            16                              70
  CLUS_3                            12                              43
D75V9, multiclass
        clus
vv       DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE
  CLUS_1                            30                             113
  CLUS_2                            19                             131
  CLUS_3                             5                              33
D75V10, multiclass
        clus
vv       DEL PEAK 44(22Q11.21) MUTATED DEL PEAK 44(22Q11.21) WILD-TYPE
  CLUS_1                             9                              41
  CLUS_2                            34                             139
  CLUS_3                            11                              97

Clustering(76) Variable = Del Peak 45(Xp22.2) mutation analysis
D76V1, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          11                            32
  CLUS_2                          18                            32
  CLUS_3                           7                            23
  CLUS_4                          10                            21
D76V2, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                           8                            20
  CLUS_2                          20                            34
  CLUS_3                          18                            54
D76V3, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          22                           107
  CLUS_2                          48                            64
  CLUS_3                          44                            73
D76V4, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          19                            71
  CLUS_2                          28                            47
  CLUS_3                          24                            35
D76V5, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          24                            36
  CLUS_2                          24                            48
  CLUS_3                          17                            45
D76V6, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          13                            34
  CLUS_2                          19                            29
  CLUS_3                          20                            38
  CLUS_4                          13                            28
D76V7, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          17                            43
  CLUS_2                          31                            49
  CLUS_3                          27                            52
  CLUS_4                           7                            31
D76V8, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          30                            86
  CLUS_2                          34                            52
  CLUS_3                          18                            37
D76V9, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          42                           101
  CLUS_2                          46                           104
  CLUS_3                          17                            21
D76V10, multiclass
        clus
vv       DEL PEAK 45(XP22.2) MUTATED DEL PEAK 45(XP22.2) WILD-TYPE
  CLUS_1                          18                            32
  CLUS_2                          48                           125
  CLUS_3                          39                            69

Clustering(77) Variable = Del Peak 46(Xp21.1) mutation analysis
D77V1, multiclass
        clus
vv       DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE
  CLUS_1                          11                            32
  CLUS_2                          20                            30
  CLUS_3                           7                            23
  CLUS_4                           9                            22
D77V2, multiclass
        clus
vv       DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE
  CLUS_1                           7                            21
  CLUS_2                          22                            32
  CLUS_3                          18                            54
D77V3, multiclass
        clus
vv       DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE
  CLUS_1                          24                           105
  CLUS_2                          51                            61
  CLUS_3                          43                            74
D77V4, multiclass
        clus
vv       DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE
  CLUS_1                          18                            72
  CLUS_2                          32                            43
  CLUS_3                          25                            34
D77V5, multiclass
        clus
vv       DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE
  CLUS_1                          23                            37
  CLUS_2                          21                            51
  CLUS_3                          17                            45
D77V6, multiclass
        clus
vv       DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE
  CLUS_1                          11                            36
  CLUS_2                          17                            31
  CLUS_3                          20                            38
  CLUS_4                          13                            28
D77V7, multiclass
        clus
vv       DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE
  CLUS_1                          16                            44
  CLUS_2                          34                            46
  CLUS_3                          24                            55
  CLUS_4                           8                            30
D77V8, multiclass
        clus
vv       DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE
  CLUS_1                          27                            89
  CLUS_2                          38                            48
  CLUS_3                          17                            38
D77V9, multiclass
        clus
vv       DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE
  CLUS_1                          44                            99
  CLUS_2                          51                            99
  CLUS_3                          16                            22
D77V10, multiclass
        clus
vv       DEL PEAK 46(XP21.1) MUTATED DEL PEAK 46(XP21.1) WILD-TYPE
  CLUS_1                          22                            28
  CLUS_2                          50                           123
  CLUS_3                          39                            69

Clustering(78) Variable = Del Peak 47(Xp11.3) mutation analysis
D78V1, multiclass
        clus
vv       DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE
  CLUS_1                           9                            34
  CLUS_2                          20                            30
  CLUS_3                           6                            24
  CLUS_4                          13                            18
D78V2, multiclass
        clus
vv       DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE
  CLUS_1                           8                            20
  CLUS_2                          22                            32
  CLUS_3                          18                            54
D78V3, multiclass
        clus
vv       DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE
  CLUS_1                          22                           107
  CLUS_2                          52                            60
  CLUS_3                          42                            75
D78V4, multiclass
        clus
vv       DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE
  CLUS_1                          15                            75
  CLUS_2                          36                            39
  CLUS_3                          22                            37
D78V5, multiclass
        clus
vv       DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE
  CLUS_1                          25                            35
  CLUS_2                          17                            55
  CLUS_3                          18                            44
D78V6, multiclass
        clus
vv       DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE
  CLUS_1                           8                            39
  CLUS_2                          18                            30
  CLUS_3                          22                            36
  CLUS_4                          12                            29
D78V7, multiclass
        clus
vv       DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE
  CLUS_1                          16                            44
  CLUS_2                          35                            45
  CLUS_3                          27                            52
  CLUS_4                           6                            32
D78V8, multiclass
        clus
vv       DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE
  CLUS_1                          28                            88
  CLUS_2                          37                            49
  CLUS_3                          19                            36
D78V9, multiclass
        clus
vv       DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE
  CLUS_1                          44                            99
  CLUS_2                          46                           104
  CLUS_3                          18                            20
D78V10, multiclass
        clus
vv       DEL PEAK 47(XP11.3) MUTATED DEL PEAK 47(XP11.3) WILD-TYPE
  CLUS_1                          21                            29
  CLUS_2                          50                           123
  CLUS_3                          37                            71

Clustering(79) Variable = Del Peak 48(Xq22.3) mutation analysis
D79V1, multiclass
        clus
vv       DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE
  CLUS_1                          17                            26
  CLUS_2                           7                            43
  CLUS_3                           5                            25
  CLUS_4                          12                            19
D79V2, multiclass
        clus
vv       DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE
  CLUS_1                           8                            20
  CLUS_2                           9                            45
  CLUS_3                          24                            48
D79V3, multiclass
        clus
vv       DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE
  CLUS_1                          16                           113
  CLUS_2                          30                            82
  CLUS_3                          45                            72
D79V4, multiclass
        clus
vv       DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE
  CLUS_1                          10                            80
  CLUS_2                          21                            54
  CLUS_3                          21                            38
D79V5, multiclass
        clus
vv       DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE
  CLUS_1                          17                            43
  CLUS_2                          17                            55
  CLUS_3                          14                            48
D79V6, multiclass
        clus
vv       DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE
  CLUS_1                          11                            36
  CLUS_2                          12                            36
  CLUS_3                          16                            42
  CLUS_4                           9                            32
D79V7, multiclass
        clus
vv       DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE
  CLUS_1                          21                            39
  CLUS_2                          16                            64
  CLUS_3                          23                            56
  CLUS_4                           5                            33
D79V8, multiclass
        clus
vv       DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE
  CLUS_1                          31                            85
  CLUS_2                          18                            68
  CLUS_3                          16                            39
D79V9, multiclass
        clus
vv       DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE
  CLUS_1                          40                           103
  CLUS_2                          36                           114
  CLUS_3                           9                            29
D79V10, multiclass
        clus
vv       DEL PEAK 48(XQ22.3) MUTATED DEL PEAK 48(XQ22.3) WILD-TYPE
  CLUS_1                          12                            38
  CLUS_2                          44                           129
  CLUS_3                          29                            79
                     V1                      V2                      V3 
            "MRNA_CNMF"    "MRNA_CHIERARCHICAL"               "CN_CNMF" 
                     V4                      V5                      V6 
     "METHLYATION_CNMF"             "RPPA_CNMF"    "RPPA_CHIERARCHICAL" 
                     V7                      V8                      V9 
         "MRNASEQ_CNMF" "MRNASEQ_CHIERARCHICAL"           "MIRSEQ_CNMF" 
                    V10 
 "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
