| GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662262/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/OV-TP/2662264/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mirnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662223/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mirnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mirnaConsensusClusteringPipeline/OV-TP/2662218/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2666666/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662300/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | OV-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662220/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/2662216/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662221/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/2662224/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662234/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/2662235/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 00:25:00 05-03-13 |
| Completed: | |
| Elapsed: | 00 hrs 01 mins 14 secs |
step 1. GDAC_mergedClustering [id: 335773] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662262/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/OV-TP/2662264/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| mirnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662223/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| mirnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mirnaConsensusClusteringPipeline/OV-TP/2662218/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2666666/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662300/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| mergedfile | OV-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662220/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/2662216/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662221/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/2662224/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/2662234/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/2662235/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| Output Files: | |
| OV-TP.mergedcluster.txt | |
| OV-TP.transferedmergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 00:25:01 05-03-13 |
| Completed: | 00:25:40 05-03-13 |
| Elapsed: | 00 hrs 00 mins 39 secs |
step 2. GDAC_mergedReport [id: 335774]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | OV-TP.mergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 00:25:01 05-03-13 |
| Completed: | 00:26:12 05-03-13 |
| Elapsed: | 00 hrs 01 mins 11 secs |