
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_CNMFselectcluster.39.4026/select_best_cluster_cnmf_v1.R")
> result <- main("-mPearson", "-u/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/334557/outputprefix.expclu.gct", "-vPRAD-TP", "-w/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/334558/cnmf.membership.txt", "-p/xchip/cga/gdac-prod/tcga-gdac/jobResults/miRseq_preprocessor/PRAD-TP/2666213/0.miRseq_preprocessor.Finished/PRAD-TP.miRseq_RPKM_log2.txt", "-c/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/334558/cnmf.cophenetic.coefficient.txt")
> q(save="no")
