# Created: Wed Apr 10 04:40:39 EDT 2013 by cgaadm_deadline
# Job: 377370    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: GDAC_mergedClustering urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
# Parameters: 
#    mrnacnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/2904314/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    mrnahc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/BRCA-TP/2904315/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt
#    mirnacnmf = 
#    mirnahc = 
#    copynumber = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/2861565/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    methlyationhc = 
#    methlyationcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/2907270/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    mergedfile = BRCA-TP
#    PredictionU133aTCGA = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/2900395/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    PredictionU133aPhilips = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/2859787/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt
#    PredictionUNCTCGA = 
#    mRNAseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/2900400/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    mRNAseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/2859783/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt
#    miRseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/2902378/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    miRseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/2902379/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt
