
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.84.4098/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.84.4098/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/BRCA-TP/2919216/1.GDAC_mergedClustering.Finished/BRCA-TP.mergedcluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/BRCA-TP/2843115/1.GDAC_clinicalDataPicker.Finished/BRCA-TP.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ALL", "-oT=", "-nV=Nozzle.R1", "-OP=AGGREGRATED_CLUSTER", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"  "-oT="
[1] "opt"                     "-OP=AGGREGRATED_CLUSTER"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"                 "AGGREGRATED_CLUSTER"
[1] "dx" ""  

nPatients in clinical file=878, in cluster file=929, common to both=873
[1]  10 873
[1] "MRNA_CNMF"
[1] 3
  1   2   3   4   5   6   7   8 
126  39  23 100  74  20 104  40 
  1   2   3   4   5   6   7   8 
126  39  23 100  74  20 104  40 
[1] "MRNA_CHIERARCHICAL"
[1] 3
  1   2   3 
143 131 252 
  1   2   3 
143 131 252 
[1] "CN_CNMF"
[1] 3
  1   2   3   4   5 
312 218  67 213  47 
  1   2   3   4   5 
312 218  67 213  47 
[1] "METHLYATION_CNMF"
[1] 3
  1   2   3   4   5   6 
 90 129  87 137  36  80 
  1   2   3   4   5   6 
 90 129  87 137  36  80 
[1] "RPPA_CNMF"
[1] 3
  1   2   3 
152 136 120 
  1   2   3 
152 136 120 
[1] "RPPA_CHIERARCHICAL"
[1] 3
  1   2   3 
163 115 130 
  1   2   3 
163 115 130 
[1] "MRNASEQ_CNMF"
[1] 3
  1   2   3   4   5   6   7   8 
150  81 100 131 179  12 151  31 
  1   2   3   4   5   6   7   8 
150  81 100 131 179  12 151  31 
[1] "MRNASEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
337 209 289 
  1   2   3 
337 209 289 
[1] "MIRSEQ_CNMF"
[1] 3
  1   2   3 
174 431 243 
  1   2   3 
174 431 243 
[1] "MIRSEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
195 594  59 
  1   2   3 
195 594  59 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "PRIMARYSITEOFDESEASE"                  
 [7] "GENDER"                                
 [8] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [9] "DAYSTOLASTKNOWNALIVE"                  
[10] "RADIATIONTHERAPY"                      
[11] "RADIATIONS.RADIATION.REGIMENINDICATION"
[12] "DISTANT.METASTASIS"                    
[13] "LYMPH.NODE.METASTASIS"                 
[14] "NUMBER.OF.LYMPH.NODES"                 
[15] "TUMOR.STAGECODE"                       
[16] "NEOPLASM.DISEASESTAGE"                 
[17] "BATCHNUMBER"                           

Input Data has 17 rows and 873 columns.

[1] "Batch" "17"   
[1] "Last Follow UP"
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH 
         259          437         1320         1463          433         1437 
TCGA-A1-A0SI TCGA-A1-A0SJ TCGA-A1-A0SK TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SO 
         634          426           NA          242         1196          852 
TCGA-A1-A0SP TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04R 
         583          553         3153           NA         1275         2364 
TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A04Y 
        1950          670           NA         1918         1349          763 
TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CP TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT 
        1827           NA         2495         2392         2298         1917 
TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0CX TCGA-A2-A0CY TCGA-A2-A0CZ 
          NA         1870         1750         1303         1288         1338 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM 
         643          786          761          736          496         2757 
TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0EQ TCGA-A2-A0ER TCGA-A2-A0ES TCGA-A2-A0ET 
        2515         2181         2053         1902         1001          807 
TCGA-A2-A0EU TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0EY TCGA-A2-A0ST 
         733          545          770          549          485         1643 
TCGA-A2-A0SU TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0SX TCGA-A2-A0SY TCGA-A2-A0T0 
        1351           NA           NA         1288         1154          337 
TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T5 TCGA-A2-A0T6 
         322           NA          456          395          321          344 
TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YE TCGA-A2-A0YF TCGA-A2-A0YG 
         397          643          550          252          289          404 
TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YJ TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A0YM 
         379          358          326          334          268          661 
TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A1FZ TCGA-A2-A1G0 
          NA          460          221          935          409          380 
TCGA-A2-A1G1 TCGA-A2-A1G4 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25B 
         371          372          132         1285         2968          258 
TCGA-A2-A25C TCGA-A2-A25D TCGA-A2-A25E TCGA-A2-A25F TCGA-A2-A3KC TCGA-A2-A3KD 
         285          243         2511          113          363          803 
TCGA-A7-A0CD TCGA-A7-A0CE TCGA-A7-A0CG TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0D9 
         170          253          166          161          188          159 
TCGA-A7-A0DA TCGA-A7-A0DB TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A13F TCGA-A7-A13G 
         373          140          267          287          196          208 
TCGA-A7-A26E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26H TCGA-A7-A26I TCGA-A7-A26J 
         421          257          209           64          122           67 
TCGA-A7-A2KD TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J0 TCGA-A7-A3J1 TCGA-A7-A3RF 
         181          151          148           76           75           54 
TCGA-A8-A06N TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A06T 
          NA          396          396           31          546         1249 
TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 TCGA-A8-A076 
          NA           NA          791           31          517         1641 
TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07C TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07G 
         274         1004          580          608          576          576 
TCGA-A8-A07I TCGA-A8-A07J TCGA-A8-A07L TCGA-A8-A07O TCGA-A8-A07P TCGA-A8-A07R 
         426          365          517          304          334          273 
TCGA-A8-A07S TCGA-A8-A07U TCGA-A8-A07W TCGA-A8-A07Z TCGA-A8-A081 TCGA-A8-A082 
         242          303          304          853           NA          549 
TCGA-A8-A083 TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08B 
          NA          458         1124          396           30          702 
TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08H TCGA-A8-A08I TCGA-A8-A08J 
         607          549          606           NA          365           NA 
TCGA-A8-A08L TCGA-A8-A08O TCGA-A8-A08P TCGA-A8-A08R TCGA-A8-A08S TCGA-A8-A08T 
          NA          942          942           30          580         2830 
TCGA-A8-A08X TCGA-A8-A08Z TCGA-A8-A090 TCGA-A8-A091 TCGA-A8-A092 TCGA-A8-A093 
        1034         1217           NA          580          487          545 
TCGA-A8-A094 TCGA-A8-A095 TCGA-A8-A096 TCGA-A8-A097 TCGA-A8-A099 TCGA-A8-A09A 
          NA         1276           NA          365          304          304 
TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09G TCGA-A8-A09I 
         365           31          396          942           NA         1006 
TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09T 
         911          457           31          761          273          578 
TCGA-A8-A09V TCGA-A8-A09W TCGA-A8-A09X TCGA-A8-A09Z TCGA-A8-A0A1 TCGA-A8-A0A2 
         457           30           NA           NA          365          578 
TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0A7 TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD 
         396          640           30          396          517         1157 
TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23G TCGA-AC-A23H TCGA-AC-A2B8 TCGA-AC-A2BK 
          29           72          329           81           44         1172 
TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FM 
        1162           44         1685         1125         1180           NA 
TCGA-AC-A2FO TCGA-AC-A2QH TCGA-AC-A2QI TCGA-AC-A2QJ TCGA-AC-A3BB TCGA-AC-A3HN 
        1542           31           28           69           30           21 
TCGA-AC-A3OD TCGA-AC-A3TN TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A046 
          35           34           10           10            7           10 
TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AJ TCGA-AN-A0AK 
          19           89           54           52          243          223 
TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FD 
         197            5            9            9           10          195 
TCGA-AN-A0FF TCGA-AN-A0FJ TCGA-AN-A0FK TCGA-AN-A0FL TCGA-AN-A0FN TCGA-AN-A0FS 
         140          241          212          230          218          191 
TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0FX TCGA-AN-A0FY TCGA-AN-A0FZ 
         183           10           11           10           10           10 
TCGA-AN-A0G0 TCGA-AN-A0XL TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR 
          16           10           10          375            9           10 
TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XU TCGA-AN-A0XV TCGA-AN-A0XW TCGA-AO-A03L 
          10           10           10          162          170         2442 
TCGA-AO-A03M TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A03R TCGA-AO-A03T 
        1455         1645           NA         2576         1707         1187 
TCGA-AO-A03U TCGA-AO-A03V TCGA-AO-A0J2 TCGA-AO-A0J3 TCGA-AO-A0J4 TCGA-AO-A0J5 
          NA          886          585          302          294          735 
TCGA-AO-A0J6 TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JA TCGA-AO-A0JB 
         775          260          277         1255          346         1150 
TCGA-AO-A0JC TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JI 
        1547         1813         1965          354          449         1172 
TCGA-AO-A0JJ TCGA-AO-A0JL TCGA-AO-A0JM TCGA-AO-A124 TCGA-AO-A125 TCGA-AO-A126 
        1512         1319         1826         3119         3018         2850 
TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12A TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12D 
        2877         2923         2754         2359         1993         1948 
TCGA-AO-A12E TCGA-AO-A12F TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KO TCGA-AO-A1KP 
        1742         1471         1265          862          448         2513 
TCGA-AO-A1KQ TCGA-AO-A1KR TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A04J 
        1519         2140           16          541          439          159 
TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AR-A0TP TCGA-AR-A0TQ 
        3344           NA          230          162         2392         1500 
TCGA-AR-A0TR TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TU TCGA-AR-A0TV TCGA-AR-A0TW 
          NA         1138         1679          360          904          739 
TCGA-AR-A0TX TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U2 
          15           NA         1313            8          185           NA 
TCGA-AR-A0U3 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AK 
        2263         1627         2298         1881         1604         1558 
TCGA-AR-A1AL TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AP TCGA-AR-A1AQ TCGA-AR-A1AR 
        1485         1329         1324         1215         1309           NA 
TCGA-AR-A1AS TCGA-AR-A1AT TCGA-AR-A1AU TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A1AX 
        1242           NA         1409         1295         1072         1103 
TCGA-AR-A1AY TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N 
         614         3333         1548         2221         1990         2074 
TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24Q TCGA-AR-A24R TCGA-AR-A24S TCGA-AR-A24T 
        1997           26         2008         1745         1888         1620 
TCGA-AR-A24U TCGA-AR-A24V TCGA-AR-A24W TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 
        1623         1648         1550         1465         1574         1707 
TCGA-AR-A251 TCGA-AR-A252 TCGA-AR-A254 TCGA-AR-A255 TCGA-AR-A256 TCGA-AR-A2LE 
        1373         1236         1212         1058           NA         3913 
TCGA-AR-A2LH TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
          NA         1303          223         1217          519          633 
TCGA-AR-A2LQ TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I5 TCGA-B6-A0I6 
         516          620           NA         3826         4549           NA 
TCGA-B6-A0I8 TCGA-B6-A0I9 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IE 
          NA           NA         6718           NA           NA           NA 
TCGA-B6-A0IG TCGA-B6-A0IH TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IM TCGA-B6-A0IN 
          NA           NA         5383           NA         3836           NA 
TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RG TCGA-B6-A0RH 
        3350         3374         3871         6434         2082         5748 
TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP 
        6795           NA           NA         5261         4928           NA 
TCGA-B6-A0RQ TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0RV TCGA-B6-A0WS 
          NA           NA         2721         3991         4788           NA 
TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WX TCGA-B6-A0WY TCGA-B6-A0WZ 
        5396           NA          546           NA           NA         3941 
TCGA-B6-A0X0 TCGA-B6-A0X1 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A0X7 TCGA-B6-A1KC 
          NA         5671           NA           NA           NA         1326 
TCGA-B6-A1KF TCGA-B6-A1KI TCGA-B6-A1KN TCGA-B6-A2IU TCGA-BH-A0AU TCGA-BH-A0AV 
        3088         1463         3330         4840          746         1180 
TCGA-BH-A0AW TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B3 
         622          777          867         1427         1148         1203 
TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0B7 TCGA-BH-A0B8 TCGA-BH-A0B9 
        1191         1471         1732         1733         1569         1572 
TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BG TCGA-BH-A0BJ 
        1132          974          554          781          756          660 
TCGA-BH-A0BL TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ TCGA-BH-A0BR 
        1339         1117         1085         1481          826         1632 
TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BW TCGA-BH-A0BZ TCGA-BH-A0C0 
        1640         1386         1519          355         1492         1270 
TCGA-BH-A0C1 TCGA-BH-A0C3 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DE TCGA-BH-A0DG 
        1338         1464         1305         1393          948          713 
TCGA-BH-A0DH TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DL TCGA-BH-A0DO TCGA-BH-A0DP 
        1156          673          423         1467          525          476 
TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0DZ 
          98           77         1170         1374         1442          495 
TCGA-BH-A0E0 TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E6 TCGA-BH-A0E7 TCGA-BH-A0E9 
         133          477          376          292         1362         1405 
TCGA-BH-A0EA TCGA-BH-A0EB TCGA-BH-A0EE TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0GZ 
          NA          745          943          743          917          328 
TCGA-BH-A0H0 TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0H9 
         461         1149         1080          747          701         1247 
TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HL 
         856          806          727          619          178           72 
TCGA-BH-A0HN TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A0HW 
         516           76          414         1121          392         1560 
TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A0W5 
         829          867          170          180          175          543 
TCGA-BH-A0W7 TCGA-BH-A0WA TCGA-BH-A18F TCGA-BH-A18G TCGA-BH-A18H TCGA-BH-A18I 
         558          372          268           61           NA          220 
TCGA-BH-A18J TCGA-BH-A18K TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18N TCGA-BH-A18P 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A18V 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1EN TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EV 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1EW TCGA-BH-A1EX TCGA-BH-A1EY TCGA-BH-A1F0 TCGA-BH-A1F2 TCGA-BH-A1F5 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1F6 TCGA-BH-A1F8 TCGA-BH-A1FB TCGA-BH-A1FC TCGA-BH-A1FD TCGA-BH-A1FE 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1FG TCGA-BH-A1FH TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FN 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1FR TCGA-BH-A1FU TCGA-BH-A201 TCGA-BH-A202 TCGA-BH-A203 TCGA-BH-A204 
          NA           NA          209           22           NA           NA 
TCGA-BH-A208 TCGA-BH-A209 TCGA-BH-A28O TCGA-BH-A28Q TCGA-C8-A12K TCGA-C8-A12L 
          NA           NA          323          196           NA           NA 
TCGA-C8-A12M TCGA-C8-A12N TCGA-C8-A12O TCGA-C8-A12P TCGA-C8-A12Q TCGA-C8-A12T 
          NA           NA           NA           NA           NA           NA 
TCGA-C8-A12U TCGA-C8-A12V TCGA-C8-A12W TCGA-C8-A12X TCGA-C8-A12Y TCGA-C8-A12Z 
          NA           NA           NA           NA           NA           NA 
TCGA-C8-A130 TCGA-C8-A131 TCGA-C8-A132 TCGA-C8-A133 TCGA-C8-A134 TCGA-C8-A135 
          NA           NA           NA           NA           NA           NA 
TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HE TCGA-C8-A1HF TCGA-C8-A1HG TCGA-C8-A1HI 
          26            7           NA           NA           NA            2 
TCGA-C8-A1HJ TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A1HO 
           5            7            2            6            2           NA 
TCGA-C8-A26V TCGA-C8-A26W TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A26Z TCGA-C8-A273 
           9            7           11           13            4            6 
TCGA-C8-A274 TCGA-C8-A275 TCGA-C8-A278 TCGA-C8-A27A TCGA-C8-A27B TCGA-D8-A13Y 
           1            1            1          371           30          264 
TCGA-D8-A13Z TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A145 
         210           27          113           61          172           49 
TCGA-D8-A146 TCGA-D8-A147 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JB 
         344            2          256          248           18           NA 
TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JH 
         178          273           57           96          187          284 
TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1JN 
          21          274          109          265          238          217 
TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1JU TCGA-D8-A1X5 TCGA-D8-A1X6 
         167          105          123          106          171          236 
TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC 
          85          272          380          274          201           81 
TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL 
         155          197          196          352          326          319 
TCGA-D8-A1XM TCGA-D8-A1XO TCGA-D8-A1XQ TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XT 
         218          242          177          168           50          193 
TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XW TCGA-D8-A1XY TCGA-D8-A1XZ TCGA-D8-A1Y0 
         149          146          117           81          120          166 
TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-D8-A27F TCGA-D8-A27G 
         115           72          124          182          227          209 
TCGA-D8-A27H TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27M TCGA-D8-A27N 
         140          185          118          125          144          145 
TCGA-D8-A27P TCGA-D8-A27R TCGA-D8-A27T TCGA-D8-A27V TCGA-D8-A27W TCGA-E2-A105 
          23           90          135           73           15         1163 
TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A108 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B 
        1555          763          124         1172          352          748 
TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14N TCGA-E2-A14O TCGA-E2-A14P 
         853          418          360         1350         1172          487 
TCGA-E2-A14Q TCGA-E2-A14R TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14U TCGA-E2-A14V 
         974          845          834          890          838          748 
TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A152 
         833          692          688          518          591          588 
TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A158 TCGA-E2-A159 
         586          325          553          481          450          515 
TCGA-E2-A15A TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15F TCGA-E2-A15G 
         502          496          315          517          468          315 
TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15M 
          42          411          463           34          331          234 
TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1AZ 
         395          315          330          274          267         1964 
TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1B6 TCGA-E2-A1BC 
        1271         1361          911          774          338          297 
TCGA-E2-A1BD TCGA-E2-A1IE TCGA-E2-A1IF TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1II 
         317          983          956          755          658          850 
TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO TCGA-E2-A1IU 
         725          518           14          392          448          127 
TCGA-E2-A1L6 TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A1LB 
        1312          633         1015          388          463          972 
TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL 
          NA          350         2875         2750           NA         1014 
TCGA-E2-A1LS TCGA-E2-A2P5 TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1N3 TCGA-E9-A1N4 
         239          326          167          217           NA           NA 
TCGA-E9-A1N5 TCGA-E9-A1N6 TCGA-E9-A1N8 TCGA-E9-A1N9 TCGA-E9-A1NA TCGA-E9-A1NC 
          NA           NA           NA           NA           NA           NA 
TCGA-E9-A1ND TCGA-E9-A1NE TCGA-E9-A1NF TCGA-E9-A1NG TCGA-E9-A1NH TCGA-E9-A1NI 
          NA           NA           NA           NA           NA           NA 
TCGA-E9-A1QZ TCGA-E9-A1R0 TCGA-E9-A1R2 TCGA-E9-A1R3 TCGA-E9-A1R4 TCGA-E9-A1R5 
          NA           NA           19           64           29           42 
TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RA TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD 
          84           34           29           21         1228           20 
TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A1RH TCGA-E9-A1RI TCGA-E9-A226 
          47           38           35           14           48           16 
TCGA-E9-A227 TCGA-E9-A228 TCGA-E9-A229 TCGA-E9-A22A TCGA-E9-A22B TCGA-E9-A22D 
          24           NA           NA           NA           NA           NA 
TCGA-E9-A22E TCGA-E9-A22G TCGA-E9-A22H TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A245 
          NA           NA           NA           43           20           25 
TCGA-E9-A247 TCGA-E9-A248 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A295 TCGA-E9-A2JS 
          12           21           28           10           21           13 
TCGA-E9-A2JT TCGA-E9-A3HO TCGA-EW-A1IW TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ 
          23           19          252         1082          258          260 
TCGA-EW-A1J1 TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OV 
         282          139          252          227          595          522 
TCGA-EW-A1OW TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ TCGA-EW-A1P0 TCGA-EW-A1P1 
         463          562          593          941         1121          919 
TCGA-EW-A1P3 TCGA-EW-A1P4 TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1P7 TCGA-EW-A1P8 
         987          501          365          312          635           NA 
TCGA-EW-A1PA TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PD TCGA-EW-A1PE TCGA-EW-A1PF 
         267          608          186          174          106          139 
TCGA-EW-A1PG TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A2FS TCGA-EW-A2FV TCGA-EW-A2FW 
         875          139         1120         1173          238          190 
TCGA-EW-A3E8 TCGA-EW-A3U0 TCGA-GI-A2C8 TCGA-GI-A2C9 TCGA-GM-A2D9 TCGA-GM-A2DA 
         647          229          212          703           NA         5909 
TCGA-GM-A2DB TCGA-GM-A2DC TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A2DI 
        1615         1628         1309         1299         1286         1883 
TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NW 
        1896         2762         2331         2352         1622         2982 
TCGA-GM-A3NY TCGA-LL-A441 TCGA-LL-A442 
         743           91          109 
Variable 1:'AGE':	nDistinctValues=64,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=94,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=533,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=25,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=16,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 10:'RADIATION.THERAPY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'DISTANT.METASTASIS':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 13:'LYMPH.NODE.METASTASIS':	nDistinctValues=16,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 14:'NUMBER.OF.LYMPH.NODES':	nDistinctValues=28,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 15:'TUMOR.STAGECODE':	nDistinctValues=12,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 16:'NEOPLASM.DISEASESTAGE':	nDistinctValues=13,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 17:'BATCH.NUMBER':	nDistinctValues=28,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "GENDER"                                
[3] "RADIATIONS.RADIATION.REGIMENINDICATION"
[4] "DISTANT.METASTASIS"                    
[5] "LYMPH.NODE.METASTASIS"                 
[6] "NUMBER.OF.LYMPH.NODES"                 
[7] "TUMOR.STAGECODE"                       
[8] "NEOPLASM.DISEASESTAGE"                 
[1] "TUMOR.?STAGE" "7"           
[1] "stage2"
vv
 T1 T1A T1B T1C  T2 T2B  T3 T3A  T4 T4B T4D  TX 
 38   1  10 183 508   1  94   1   7  25   2   3 
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 873 columns, 1 survival variables, and 8 non-survival variables.
AGE, nv=64, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE
DISTANT.METASTASIS, nv=4, binary=FALSE, numeric=FALSE
LYMPH.NODE.METASTASIS, nv=16, binary=FALSE, numeric=FALSE
NUMBER.OF.LYMPH.NODES, nv=28, binary=FALSE, numeric=TRUE
TUMOR.STAGECODE, nv=0, binary=FALSE, numeric=TRUE
NEOPLASM.DISEASESTAGE, nv=13, binary=FALSE, numeric=FALSE

Clustering(1) Variable = MRNA_CNMF
D1V1, survival
          sevent
clus2       0  1
  subtype1 99 17
  subtype2 35  3
  subtype3 18  3
  subtype4 83 12
  subtype5 51 14
  subtype6 17  2
  subtype7 91 10
  subtype8 35  4
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
     116       38       21       95       65       19      101       39 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
      17        3        3       12       14        2       10        4 
$subtype1
TCGA-A1-A0SD TCGA-A1-A0SJ TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04Y TCGA-A2-A0CT 
       14.37        14.01        77.72        63.12        25.08        63.02 
TCGA-A2-A0CU TCGA-A2-A0CW TCGA-A2-A0D4 TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU 
        5.16        57.53        16.31        62.53        26.53        24.10 
TCGA-A2-A0T3 TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A7-A0CD TCGA-A7-A0CJ TCGA-A7-A0D9 
       14.99        12.46        23.77         5.59         6.18         5.23 
TCGA-A7-A13F TCGA-A8-A06O TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Z 
        6.44        13.02        41.06        29.00        31.00         1.02 
TCGA-A8-A079 TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07W TCGA-A8-A07Z TCGA-A8-A082 
        9.01        17.00        10.98         9.99        28.04        18.05 
TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A091 TCGA-A8-A09D 
       36.95        13.02        18.05        19.92        19.07        13.02 
TCGA-A8-A09E TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A0A9 
       30.97        29.95        15.02        25.02         8.98        13.02 
TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AK TCGA-AN-A0FD TCGA-AN-A0FF 
        0.23         0.62         2.93         7.33         6.41         4.60 
TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XT TCGA-AO-A03P TCGA-AO-A03R 
        0.36         0.33         0.33         0.33        84.69        56.12 
TCGA-AO-A03T TCGA-AO-A03V TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0JI TCGA-AO-A126 
       39.02        29.13         9.93         8.55        38.53        93.70 
TCGA-AO-A12H TCGA-AQ-A04H TCGA-AR-A0TQ TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY 
       28.34        14.43        49.32        29.72        24.30        55.86 
TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0RG 
       43.17        83.87       126.12        84.59       110.14        68.45 
TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0X5 
       81.17        78.02       177.40        79.63        17.95        68.94 
TCGA-BH-A0AU TCGA-BH-A0B4 TCGA-BH-A0B8 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH 
       24.53        39.16        51.58        42.90        45.80        38.01 
TCGA-BH-A0DK TCGA-BH-A0E2 TCGA-BH-A0E7 TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H3 
       13.91        12.36        44.78        10.78        15.16        37.78 
TCGA-BH-A0H7 TCGA-BH-A0HB TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A18L TCGA-BH-A18N 
       23.05        26.50        51.29        27.25        26.66        37.74 
TCGA-BH-A18R TCGA-BH-A1ES TCGA-C8-A1HN TCGA-D8-A13Y TCGA-D8-A140 TCGA-E2-A105 
       37.51       113.82         0.07         8.68         0.89        38.24 
TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T 
       51.12        38.53        11.57        38.53        27.42        29.26 
TCGA-E2-A14W TCGA-E2-A155 TCGA-E2-A15A TCGA-E2-A15F TCGA-E2-A15O TCGA-E2-A15R 
       27.39        18.18        16.50        15.39        12.99        10.85 
TCGA-E2-A15S TCGA-E2-A15T 
        9.01         8.78 

$subtype2
TCGA-A1-A0SE TCGA-A2-A0CP TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0EO TCGA-A2-A0ES 
       43.40        82.03        61.48        43.99        71.70        32.91 
TCGA-A2-A0EX TCGA-A2-A0SU TCGA-A2-A0T7 TCGA-A2-A0YL TCGA-A8-A08O TCGA-A8-A09A 
       18.05        44.42        13.05         8.81        30.97         9.99 
TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A0JA TCGA-AO-A0JB 
       13.02        21.04        80.28        47.84        11.38        37.81 
TCGA-AO-A12C TCGA-AO-A12E TCGA-AR-A1AK TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AU 
       65.52        57.27        51.22        43.69        43.53        46.32 
TCGA-B6-A0IE TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WY TCGA-BH-A0AZ TCGA-BH-A0B1 
       65.69       140.48       157.41       113.75        28.50        37.74 
TCGA-BH-A0DI TCGA-BH-A0E9 TCGA-BH-A0EI TCGA-C8-A1HI TCGA-E2-A14Q TCGA-E2-A15E 
       22.13        46.19        24.43         0.07        32.02        17.00 
TCGA-E2-A15H TCGA-E2-A1B1 
        1.38        44.75 

$subtype3
TCGA-A1-A0SH TCGA-A1-A0SM TCGA-A2-A04N TCGA-A2-A0SV TCGA-A8-A06P TCGA-A8-A07I 
       47.24         7.96       103.66        27.12        13.02        14.01 
TCGA-A8-A08Z TCGA-A8-A097 TCGA-AN-A03X TCGA-AN-A0AS TCGA-AN-A0XN TCGA-AN-A0XS 
       40.01        12.00         0.33         0.30         0.33         0.33 
TCGA-AN-A0XW TCGA-B6-A0RI TCGA-BH-A0DZ TCGA-BH-A0H6 TCGA-BH-A18J TCGA-BH-A1EO 
        5.59       223.40        16.27        24.56        20.09        91.99 
TCGA-D8-A141 TCGA-E2-A10F TCGA-E2-A153 
        3.72        11.84        19.27 

$subtype4
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        64.11 
TCGA-A2-A04U TCGA-A2-A0CM TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D2 TCGA-A2-A0ST 
       22.03        24.79        42.35        21.14        25.02        54.02 
TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM 
       42.35        11.08         7.96         8.28        10.72        21.73 
TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A07C TCGA-A8-A07O 
        8.32        12.26         8.78         9.44        19.07         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08R TCGA-A8-A08X TCGA-AN-A04D TCGA-AN-A0AL 
        8.98         9.96         0.99        33.99         1.71         6.48 
TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FX 
        0.16         0.30         0.33         7.92         7.56         0.33 
TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JL 
        0.53         0.33        59.05         9.67        25.48        43.36 
TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12F TCGA-AQ-A04J TCGA-AR-A0TP 
      102.54        94.59        96.10        48.36         5.23        78.64 
TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI 
       37.41        11.84         0.26        53.49        75.55        61.84 
TCGA-AR-A1AJ TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-B6-A0I2 TCGA-B6-A0I6 
       52.73        43.04        17.19        20.19       125.79        32.58 
TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      176.98       127.27       211.53        89.46       131.21        21.47 
TCGA-B6-A0X1 TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BG TCGA-BH-A0BL 
      186.44        38.79        39.55        51.68        24.85        44.02 
TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0RX TCGA-BH-A0WA 
       11.67        48.23         4.37         9.60         5.59        12.23 
TCGA-BH-A18G TCGA-BH-A18K TCGA-BH-A18Q TCGA-BH-A18V TCGA-BH-A1F0 TCGA-D8-A142 
        2.01        90.81        55.63        51.12        25.81         2.01 
TCGA-D8-A143 TCGA-D8-A147 TCGA-E2-A14N TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Y 
        5.65         0.07        44.38        27.78        22.75        22.62 
TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B5 
       19.43        14.79        16.93        64.57        25.45 

$subtype5
TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A0CX TCGA-A2-A0D1 TCGA-A2-A0EY TCGA-A2-A0SW 
       63.06        44.35        42.84        25.84        15.95        44.84 
TCGA-A2-A0T1 TCGA-A2-A0YG TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A075 TCGA-A8-A076 
       10.59        13.28         1.02        17.95        17.00        53.95 
TCGA-A8-A07B TCGA-A8-A084 TCGA-A8-A08B TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A092 
       33.01        15.06        23.08        37.05         9.99        16.01 
TCGA-A8-A09I TCGA-A8-A09N TCGA-A8-A09W TCGA-A8-A09X TCGA-AN-A04C TCGA-AN-A0FT 
       33.07         1.02         0.99        14.01         1.78         6.02 
TCGA-AN-A0FV TCGA-AO-A03N TCGA-AO-A0J2 TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JM 
        0.33        54.08        19.23        59.61        64.60        60.03 
TCGA-AO-A12D TCGA-AQ-A04L TCGA-AR-A0TX TCGA-AR-A0U3 TCGA-AR-A1AT TCGA-B6-A0I8 
       64.04       109.94         0.49        74.40        41.82        24.62 
TCGA-B6-A0I9 TCGA-B6-A0IG TCGA-B6-A0IK TCGA-B6-A0RH TCGA-B6-A0RS TCGA-BH-A0AW 
       12.13       146.50        18.77       188.98       100.67        20.45 
TCGA-BH-A0B7 TCGA-BH-A0BR TCGA-BH-A0C1 TCGA-BH-A0DS TCGA-BH-A0EE TCGA-BH-A0GY 
       56.98        53.65        43.99         2.53        31.00        30.15 
TCGA-BH-A0H9 TCGA-BH-A0HU TCGA-BH-A0HY TCGA-BH-A18P TCGA-BH-A18T TCGA-BH-A18U 
       41.00        12.89        28.50        30.28         7.36        51.39 
TCGA-BH-A1EV TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HL TCGA-D8-A13Z TCGA-E2-A107 
       12.00         0.85         0.23         0.07         6.90        25.08 
TCGA-E2-A10C TCGA-E2-A14P TCGA-E2-A14V TCGA-E2-A152 TCGA-E2-A1B0 
       28.04        16.01        24.59        19.33        41.79 

$subtype6
TCGA-A2-A0CL TCGA-A2-A0EQ TCGA-A8-A08I TCGA-A8-A08P TCGA-A8-A0A7 TCGA-AN-A0AJ 
       60.07        67.50        12.00        30.97         0.99         7.99 
TCGA-AO-A03O TCGA-AO-A0JC TCGA-AR-A0TT TCGA-AR-A1AV TCGA-AR-A1AX TCGA-B6-A0WS 
       81.63        50.86        55.20        42.58        36.26        97.48 
TCGA-BH-A0BF TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0H5 TCGA-BH-A0W7 TCGA-C8-A1HM 
       25.68        49.05        41.75        35.51        18.35         0.20 
TCGA-E2-A14Z 
       17.03 

$subtype7
TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0D3 TCGA-A2-A0EM TCGA-A2-A0EV TCGA-A2-A0T5 
       78.64        75.55        24.20        90.64        17.92        10.55 
TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YI TCGA-A7-A0CH TCGA-A7-A0DB 
       21.14        18.08         9.50        11.77         5.29         4.60 
TCGA-A8-A06Y TCGA-A8-A07F TCGA-A8-A07G TCGA-A8-A07S TCGA-A8-A08A TCGA-A8-A08C 
       26.01        18.94        18.94         7.96         0.99        19.96 
TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A099 TCGA-A8-A09B 
       19.07        93.04        17.92        41.95         9.99        12.00 
TCGA-A8-A09C TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A0A1 TCGA-A8-A0A2 TCGA-A8-A0AB 
        1.02        19.00        15.02        12.00        19.00        17.00 
TCGA-A8-A0AD TCGA-AN-A03Y TCGA-AN-A046 TCGA-AN-A0FK TCGA-AN-A0XO TCGA-AN-A0XP 
       38.04         0.33         0.33         6.97        12.33         0.30 
TCGA-AN-A0XR TCGA-AN-A0XV TCGA-AO-A0J8 TCGA-AO-A125 TCGA-AO-A12A TCGA-AO-A12B 
        0.33         5.33         9.11        99.22        90.54        77.56 
TCGA-AO-A12G TCGA-AR-A0TR TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AW TCGA-B6-A0I5 
       41.59         5.26        39.95        40.83        35.24       149.56 
TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IP TCGA-B6-A0RN TCGA-B6-A0RO 
      220.87       129.57        50.70       110.93       172.96       162.02 
TCGA-B6-A0RP TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-BH-A0B5 TCGA-BH-A0BA 
      102.77       129.57       129.70        28.24        48.36        37.22 
TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0BJ TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BT 
       32.02        18.21        21.70        27.16        53.92        45.57 
TCGA-BH-A0BV TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DT TCGA-BH-A0E1 TCGA-BH-A0EA 
       49.94        17.26        15.65        38.47        15.68        32.65 
TCGA-BH-A0EB TCGA-BH-A0HA TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HO TCGA-BH-A0HP 
       24.49        28.14        23.90        20.35         2.50        13.61 
TCGA-BH-A0HQ TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A18I TCGA-BH-A18M 
       36.85         5.92         5.75        17.85         7.23        72.56 
TCGA-BH-A18S TCGA-BH-A1ET TCGA-D8-A146 TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A154 
       66.05        82.85        11.31        24.59        13.74        10.68 
TCGA-E2-A156 TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15G TCGA-E2-A15I TCGA-E2-A15J 
       15.81        16.31        10.36        10.36        13.51        15.22 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15P TCGA-E2-A1B4 TCGA-E2-A1BD 
        1.12        10.88        10.36        29.95        10.42 

$subtype8
TCGA-A2-A0EN TCGA-A2-A0EW TCGA-A2-A0SY TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0YK 
       82.68        25.32        37.94        12.99        11.31        10.98 
TCGA-A7-A0CG TCGA-A8-A07E TCGA-A8-A07J TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0XL 
        5.46        19.99        12.00         7.17         6.28         0.33 
TCGA-AO-A0J5 TCGA-AO-A0J9 TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AR-A1AL 
       24.16        41.26        11.64        14.76        49.71        48.82 
TCGA-B6-A0IH TCGA-B6-A0X7 TCGA-BH-A0AY TCGA-BH-A0B0 TCGA-BH-A0BM TCGA-BH-A0BO 
      112.37        58.88        25.55        46.92        36.72        35.67 
TCGA-BH-A0BP TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DQ TCGA-BH-A0DX 
       48.69        48.13        31.17        23.44         3.22        47.41 
TCGA-BH-A0HK TCGA-BH-A18F TCGA-BH-A1EU TCGA-BH-A1EW TCGA-D8-A145 TCGA-E2-A108 
        5.85         8.81        42.28        55.69         1.61         4.08 
TCGA-E2-A15M TCGA-E2-A1B6 TCGA-E2-A1BC 
        7.69        11.11         9.76 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
    0.07     0.07     0.30     0.07     0.07     0.20     0.30     0.33 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
  177.40   157.41   223.40   211.53   188.98    97.48   220.87   112.37 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
  24.415   43.465   14.010   22.620   24.620   36.260   19.000   23.440 
[1] "0.1 - 177.4 (24.4)" "0.1 - 157.4 (43.5)" "0.3 - 223.4 (14.0)"
[4] "0.1 - 211.5 (22.6)" "0.1 - 189.0 (24.6)" "0.2 - 97.5 (36.3)" 
[7] "0.3 - 220.9 (19.0)" "0.3 - 112.4 (23.4)"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype4" "subtype3"
  [7] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype1"
 [13] "subtype4" "subtype4" "subtype1" "subtype5" "subtype5" "subtype1"
 [19] "subtype6" "subtype4" "subtype2" "subtype7" "subtype7" "subtype1"
 [25] "subtype1" "subtype2" "subtype1" "subtype5" "subtype4" "subtype2"
 [31] "subtype4" "subtype5" "subtype4" "subtype7" "subtype1" "subtype7"
 [37] "subtype8" "subtype2" "subtype6" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype7" "subtype8" "subtype2" "subtype5" "subtype4"
 [49] "subtype2" "subtype3" "subtype5" "subtype4" "subtype8" "subtype4"
 [55] "subtype5" "subtype4" "subtype1" "subtype8" "subtype7" "subtype8"
 [61] "subtype2" "subtype7" "subtype7" "subtype4" "subtype7" "subtype5"
 [67] "subtype1" "subtype7" "subtype4" "subtype8" "subtype2" "subtype4"
 [73] "subtype1" "subtype1" "subtype4" "subtype8" "subtype7" "subtype1"
 [79] "subtype1" "subtype4" "subtype7" "subtype4" "subtype4" "subtype1"
 [85] "subtype1" "subtype3" "subtype5" "subtype5" "subtype1" "subtype1"
 [91] "subtype1" "subtype7" "subtype1" "subtype5" "subtype5" "subtype1"
 [97] "subtype5" "subtype4" "subtype8" "subtype7" "subtype7" "subtype3"
[103] "subtype8" "subtype1" "subtype4" "subtype1" "subtype4" "subtype7"
[109] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype1"
[115] "subtype1" "subtype7" "subtype5" "subtype7" "subtype1" "subtype1"
[121] "subtype6" "subtype5" "subtype5" "subtype2" "subtype6" "subtype4"
[127] "subtype7" "subtype7" "subtype4" "subtype3" "subtype1" "subtype5"
[133] "subtype7" "subtype7" "subtype3" "subtype7" "subtype2" "subtype7"
[139] "subtype7" "subtype1" "subtype1" "subtype5" "subtype1" "subtype1"
[145] "subtype5" "subtype1" "subtype1" "subtype7" "subtype7" "subtype5"
[151] "subtype5" "subtype7" "subtype7" "subtype2" "subtype2" "subtype6"
[157] "subtype1" "subtype7" "subtype7" "subtype3" "subtype7" "subtype1"
[163] "subtype7" "subtype1" "subtype1" "subtype5" "subtype4" "subtype6"
[169] "subtype1" "subtype4" "subtype4" "subtype4" "subtype3" "subtype4"
[175] "subtype1" "subtype1" "subtype4" "subtype7" "subtype4" "subtype8"
[181] "subtype8" "subtype5" "subtype5" "subtype1" "subtype4" "subtype1"
[187] "subtype1" "subtype4" "subtype8" "subtype3" "subtype7" "subtype7"
[193] "subtype7" "subtype3" "subtype1" "subtype4" "subtype7" "subtype3"
[199] "subtype2" "subtype2" "subtype5" "subtype6" "subtype1" "subtype1"
[205] "subtype1" "subtype4" "subtype1" "subtype5" "subtype1" "subtype4"
[211] "subtype8" "subtype4" "subtype1" "subtype7" "subtype8" "subtype2"
[217] "subtype2" "subtype6" "subtype5" "subtype5" "subtype8" "subtype8"
[223] "subtype1" "subtype8" "subtype4" "subtype5" "subtype4" "subtype7"
[229] "subtype1" "subtype4" "subtype4" "subtype7" "subtype7" "subtype2"
[235] "subtype5" "subtype2" "subtype4" "subtype7" "subtype1" "subtype1"
[241] "subtype4" "subtype5" "subtype4" "subtype1" "subtype7" "subtype4"
[247] "subtype6" "subtype4" "subtype1" "subtype1" "subtype5" "subtype1"
[253] "subtype1" "subtype4" "subtype1" "subtype5" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype2" "subtype8" "subtype2" "subtype2"
[265] "subtype7" "subtype4" "subtype4" "subtype7" "subtype5" "subtype2"
[271] "subtype6" "subtype7" "subtype6" "subtype4" "subtype4" "subtype7"
[277] "subtype4" "subtype5" "subtype5" "subtype7" "subtype7" "subtype7"
[283] "subtype2" "subtype5" "subtype8" "subtype4" "subtype5" "subtype1"
[289] "subtype1" "subtype1" "subtype7" "subtype4" "subtype4" "subtype1"
[295] "subtype5" "subtype3" "subtype1" "subtype1" "subtype7" "subtype7"
[301] "subtype7" "subtype2" "subtype5" "subtype4" "subtype4" "subtype2"
[307] "subtype6" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[313] "subtype7" "subtype7" "subtype4" "subtype7" "subtype1" "subtype8"
[319] "subtype1" "subtype4" "subtype5" "subtype8" "subtype2" "subtype8"
[325] "subtype2" "subtype4" "subtype1" "subtype7" "subtype5" "subtype1"
[331] "subtype4" "subtype7" "subtype7" "subtype7" "subtype6" "subtype4"
[337] "subtype7" "subtype4" "subtype8" "subtype8" "subtype8" "subtype7"
[343] "subtype5" "subtype7" "subtype7" "subtype7" "subtype4" "subtype6"
[349] "subtype6" "subtype5" "subtype8" "subtype1" "subtype1" "subtype8"
[355] "subtype8" "subtype1" "subtype2" "subtype1" "subtype4" "subtype7"
[361] "subtype7" "subtype8" "subtype5" "subtype7" "subtype8" "subtype3"
[367] "subtype4" "subtype7" "subtype1" "subtype4" "subtype1" "subtype2"
[373] "subtype7" "subtype7" "subtype5" "subtype2" "subtype5" "subtype1"
[379] "subtype1" "subtype1" "subtype6" "subtype3" "subtype1" "subtype5"
[385] "subtype7" "subtype1" "subtype7" "subtype7" "subtype8" "subtype7"
[391] "subtype7" "subtype7" "subtype5" "subtype1" "subtype1" "subtype5"
[397] "subtype4" "subtype7" "subtype7" "subtype7" "subtype6" "subtype4"
[403] "subtype8" "subtype4" "subtype7" "subtype3" "subtype4" "subtype1"
[409] "subtype7" "subtype1" "subtype5" "subtype4" "subtype1" "subtype7"
[415] "subtype5" "subtype5" "subtype4" "subtype3" "subtype1" "subtype7"
[421] "subtype8" "subtype5" "subtype8" "subtype4" "subtype5" "subtype5"
[427] "subtype2" "subtype5" "subtype6" "subtype1" "subtype1" "subtype5"
[433] "subtype1" "subtype3" "subtype4" "subtype4" "subtype8" "subtype7"
[439] "subtype4" "subtype1" "subtype1" "subtype5" "subtype8" "subtype1"
[445] "subtype1" "subtype7" "subtype5" "subtype7" "subtype3" "subtype4"
[451] "subtype1" "subtype5" "subtype2" "subtype4" "subtype1" "subtype1"
[457] "subtype5" "subtype1" "subtype4" "subtype4" "subtype6" "subtype4"
[463] "subtype5" "subtype3" "subtype7" "subtype1" "subtype7" "subtype4"
[469] "subtype4" "subtype1" "subtype7" "subtype7" "subtype2" "subtype1"
[475] "subtype7" "subtype2" "subtype7" "subtype7" "subtype7" "subtype7"
[481] "subtype8" "subtype1" "subtype7" "subtype1" "subtype1" "subtype1"
[487] "subtype4" "subtype5" "subtype2" "subtype7" "subtype4" "subtype8"
[493] "subtype8" "subtype7"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype4" "subtype3"
  [7] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype1"
 [13] "subtype4" "subtype4" "subtype1" "subtype5" "subtype5" "subtype1"
 [19] "subtype6" "subtype4" "subtype2" "subtype7" "subtype7" "subtype1"
 [25] "subtype1" "subtype2" "subtype1" "subtype5" "subtype4" "subtype2"
 [31] "subtype4" "subtype5" "subtype4" "subtype7" "subtype1" "subtype7"
 [37] "subtype8" "subtype2" "subtype6" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype7" "subtype8" "subtype2" "subtype5" "subtype4"
 [49] "subtype2" "subtype3" "subtype5" "subtype4" "subtype8" "subtype4"
 [55] "subtype5" "subtype4" "subtype1" "subtype8" "subtype7" "subtype8"
 [61] "subtype2" "subtype7" "subtype7" "subtype4" "subtype7" "subtype5"
 [67] "subtype1" "subtype7" "subtype4" "subtype8" "subtype2" "subtype4"
 [73] "subtype1" "subtype1" "subtype4" "subtype8" "subtype7" "subtype1"
 [79] "subtype1" "subtype4" "subtype7" "subtype4" "subtype4" "subtype1"
 [85] "subtype1" "subtype3" "subtype5" "subtype5" "subtype1" "subtype1"
 [91] "subtype1" "subtype7" "subtype1" "subtype5" "subtype5" "subtype1"
 [97] "subtype5" "subtype4" "subtype8" "subtype7" "subtype7" "subtype3"
[103] "subtype8" "subtype1" "subtype4" "subtype1" "subtype4" "subtype7"
[109] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype1"
[115] "subtype1" "subtype7" "subtype5" "subtype7" "subtype1" "subtype1"
[121] "subtype6" "subtype5" "subtype5" "subtype2" "subtype6" "subtype4"
[127] "subtype7" "subtype7" "subtype4" "subtype3" "subtype1" "subtype5"
[133] "subtype7" "subtype7" "subtype3" "subtype7" "subtype2" "subtype7"
[139] "subtype7" "subtype1" "subtype1" "subtype5" "subtype1" "subtype1"
[145] "subtype5" "subtype1" "subtype1" "subtype7" "subtype7" "subtype5"
[151] "subtype5" "subtype7" "subtype7" "subtype2" "subtype2" "subtype6"
[157] "subtype1" "subtype7" "subtype7" "subtype3" "subtype7" "subtype1"
[163] "subtype7" "subtype1" "subtype1" "subtype5" "subtype4" "subtype6"
[169] "subtype1" "subtype4" "subtype4" "subtype4" "subtype3" "subtype4"
[175] "subtype1" "subtype1" "subtype4" "subtype7" "subtype4" "subtype8"
[181] "subtype8" "subtype5" "subtype5" "subtype1" "subtype4" "subtype1"
[187] "subtype1" "subtype4" "subtype8" "subtype3" "subtype7" "subtype7"
[193] "subtype7" "subtype3" "subtype1" "subtype4" "subtype7" "subtype3"
[199] "subtype2" "subtype2" "subtype5" "subtype6" "subtype1" "subtype1"
[205] "subtype1" "subtype4" "subtype1" "subtype5" "subtype1" "subtype4"
[211] "subtype8" "subtype4" "subtype1" "subtype7" "subtype8" "subtype2"
[217] "subtype2" "subtype6" "subtype5" "subtype5" "subtype8" "subtype8"
[223] "subtype1" "subtype8" "subtype4" "subtype5" "subtype4" "subtype7"
[229] "subtype1" "subtype4" "subtype4" "subtype7" "subtype7" "subtype2"
[235] "subtype5" "subtype2" "subtype4" "subtype7" "subtype1" "subtype1"
[241] "subtype4" "subtype5" "subtype4" "subtype1" "subtype7" "subtype4"
[247] "subtype6" "subtype4" "subtype1" "subtype1" "subtype5" "subtype1"
[253] "subtype1" "subtype4" "subtype1" "subtype5" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype2" "subtype8" "subtype2" "subtype2"
[265] "subtype7" "subtype4" "subtype4" "subtype7" "subtype5" "subtype2"
[271] "subtype6" "subtype7" "subtype6" "subtype4" "subtype4" "subtype7"
[277] "subtype4" "subtype5" "subtype5" "subtype7" "subtype7" "subtype7"
[283] "subtype2" "subtype5" "subtype8" "subtype4" "subtype5" "subtype1"
[289] "subtype1" "subtype1" "subtype7" "subtype4" "subtype4" "subtype1"
[295] "subtype5" "subtype3" "subtype1" "subtype1" "subtype7" "subtype7"
[301] "subtype7" "subtype2" "subtype5" "subtype4" "subtype4" "subtype2"
[307] "subtype6" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[313] "subtype7" "subtype7" "subtype4" "subtype7" "subtype1" "subtype8"
[319] "subtype1" "subtype4" "subtype5" "subtype8" "subtype2" "subtype8"
[325] "subtype2" "subtype4" "subtype1" "subtype7" "subtype5" "subtype1"
[331] "subtype4" "subtype7" "subtype7" "subtype7" "subtype6" "subtype4"
[337] "subtype7" "subtype4" "subtype8" "subtype8" "subtype8" "subtype7"
[343] "subtype5" "subtype7" "subtype7" "subtype7" "subtype4" "subtype6"
[349] "subtype6" "subtype5" "subtype8" "subtype1" "subtype1" "subtype8"
[355] "subtype8" "subtype1" "subtype2" "subtype1" "subtype4" "subtype7"
[361] "subtype7" "subtype8" "subtype5" "subtype7" "subtype8" "subtype3"
[367] "subtype4" "subtype7" "subtype1" "subtype4" "subtype1" "subtype2"
[373] "subtype7" "subtype7" "subtype5" "subtype2" "subtype5" "subtype1"
[379] "subtype1" "subtype1" "subtype6" "subtype3" "subtype1" "subtype5"
[385] "subtype7" "subtype1" "subtype7" "subtype7" "subtype8" "subtype7"
[391] "subtype7" "subtype7" "subtype5" "subtype1" "subtype1" "subtype5"
[397] "subtype4" "subtype7" "subtype7" "subtype7" "subtype6" "subtype4"
[403] "subtype8" "subtype4" "subtype7" "subtype3" "subtype4" "subtype1"
[409] "subtype7" "subtype1" "subtype5" "subtype4" "subtype1" "subtype7"
[415] "subtype5" "subtype5" "subtype4" "subtype3" "subtype1" "subtype7"
[421] "subtype8" "subtype5" "subtype8" "subtype4" "subtype5" "subtype5"
[427] "subtype2" "subtype5" "subtype6" "subtype1" "subtype1" "subtype5"
[433] "subtype1" "subtype3" "subtype4" "subtype4" "subtype8" "subtype7"
[439] "subtype4" "subtype1" "subtype1" "subtype5" "subtype8" "subtype1"
[445] "subtype1" "subtype7" "subtype5" "subtype7" "subtype3" "subtype4"
[451] "subtype1" "subtype5" "subtype2" "subtype4" "subtype1" "subtype1"
[457] "subtype5" "subtype1" "subtype4" "subtype4" "subtype6" "subtype4"
[463] "subtype5" "subtype3" "subtype7" "subtype1" "subtype7" "subtype4"
[469] "subtype4" "subtype1" "subtype7" "subtype7" "subtype2" "subtype1"
[475] "subtype7" "subtype2" "subtype7" "subtype7" "subtype7" "subtype7"
[481] "subtype8" "subtype1" "subtype7" "subtype1" "subtype1" "subtype1"
[487] "subtype4" "subtype5" "subtype2" "subtype7" "subtype4" "subtype8"
[493] "subtype8" "subtype7"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype4" "subtype3"
  [7] "subtype4" "subtype4" "subtype3" "subtype4" "subtype4" "subtype1"
 [13] "subtype4" "subtype4" "subtype1" "subtype5" "subtype5" "subtype1"
 [19] "subtype6" "subtype4" "subtype2" "subtype7" "subtype7" "subtype1"
 [25] "subtype1" "subtype2" "subtype1" "subtype5" "subtype4" "subtype2"
 [31] "subtype4" "subtype5" "subtype4" "subtype7" "subtype1" "subtype7"
 [37] "subtype8" "subtype2" "subtype6" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype7" "subtype8" "subtype2" "subtype5" "subtype4"
 [49] "subtype2" "subtype3" "subtype5" "subtype4" "subtype8" "subtype4"
 [55] "subtype5" "subtype4" "subtype1" "subtype8" "subtype7" "subtype8"
 [61] "subtype2" "subtype7" "subtype7" "subtype4" "subtype7" "subtype5"
 [67] "subtype1" "subtype7" "subtype4" "subtype8" "subtype2" "subtype4"
 [73] "subtype1" "subtype1" "subtype4" "subtype8" "subtype7" "subtype1"
 [79] "subtype1" "subtype4" "subtype7" "subtype4" "subtype4" "subtype1"
 [85] "subtype1" "subtype3" "subtype5" "subtype5" "subtype1" "subtype1"
 [91] "subtype1" "subtype7" "subtype1" "subtype5" "subtype5" "subtype1"
 [97] "subtype5" "subtype4" "subtype8" "subtype7" "subtype7" "subtype3"
[103] "subtype8" "subtype1" "subtype4" "subtype1" "subtype4" "subtype7"
[109] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype1"
[115] "subtype1" "subtype7" "subtype5" "subtype7" "subtype1" "subtype1"
[121] "subtype6" "subtype5" "subtype5" "subtype2" "subtype6" "subtype4"
[127] "subtype7" "subtype7" "subtype4" "subtype3" "subtype1" "subtype5"
[133] "subtype7" "subtype7" "subtype3" "subtype7" "subtype2" "subtype7"
[139] "subtype7" "subtype1" "subtype1" "subtype5" "subtype1" "subtype1"
[145] "subtype5" "subtype1" "subtype1" "subtype7" "subtype7" "subtype5"
[151] "subtype5" "subtype7" "subtype7" "subtype2" "subtype2" "subtype6"
[157] "subtype1" "subtype7" "subtype7" "subtype3" "subtype7" "subtype1"
[163] "subtype7" "subtype1" "subtype1" "subtype5" "subtype4" "subtype6"
[169] "subtype1" "subtype4" "subtype4" "subtype4" "subtype3" "subtype4"
[175] "subtype1" "subtype1" "subtype4" "subtype7" "subtype4" "subtype8"
[181] "subtype8" "subtype5" "subtype5" "subtype1" "subtype4" "subtype1"
[187] "subtype1" "subtype4" "subtype8" "subtype3" "subtype7" "subtype7"
[193] "subtype7" "subtype3" "subtype1" "subtype4" "subtype7" "subtype3"
[199] "subtype2" "subtype2" "subtype5" "subtype6" "subtype1" "subtype1"
[205] "subtype1" "subtype4" "subtype1" "subtype5" "subtype1" "subtype4"
[211] "subtype8" "subtype4" "subtype1" "subtype7" "subtype8" "subtype2"
[217] "subtype2" "subtype6" "subtype5" "subtype5" "subtype8" "subtype8"
[223] "subtype1" "subtype8" "subtype4" "subtype5" "subtype4" "subtype7"
[229] "subtype1" "subtype4" "subtype4" "subtype7" "subtype7" "subtype2"
[235] "subtype5" "subtype2" "subtype4" "subtype7" "subtype1" "subtype1"
[241] "subtype4" "subtype5" "subtype4" "subtype1" "subtype7" "subtype4"
[247] "subtype6" "subtype4" "subtype1" "subtype1" "subtype5" "subtype1"
[253] "subtype1" "subtype4" "subtype1" "subtype5" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype2" "subtype8" "subtype2" "subtype2"
[265] "subtype7" "subtype4" "subtype4" "subtype7" "subtype5" "subtype2"
[271] "subtype6" "subtype7" "subtype6" "subtype4" "subtype4" "subtype7"
[277] "subtype4" "subtype5" "subtype5" "subtype7" "subtype7" "subtype7"
[283] "subtype2" "subtype5" "subtype8" "subtype4" "subtype5" "subtype1"
[289] "subtype1" "subtype1" "subtype7" "subtype4" "subtype4" "subtype1"
[295] "subtype5" "subtype3" "subtype1" "subtype1" "subtype7" "subtype7"
[301] "subtype7" "subtype2" "subtype5" "subtype4" "subtype4" "subtype2"
[307] "subtype6" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[313] "subtype7" "subtype7" "subtype4" "subtype7" "subtype1" "subtype8"
[319] "subtype1" "subtype4" "subtype5" "subtype8" "subtype2" "subtype8"
[325] "subtype2" "subtype4" "subtype1" "subtype7" "subtype5" "subtype1"
[331] "subtype4" "subtype7" "subtype7" "subtype7" "subtype6" "subtype4"
[337] "subtype7" "subtype4" "subtype8" "subtype8" "subtype8" "subtype7"
[343] "subtype5" "subtype7" "subtype7" "subtype7" "subtype4" "subtype6"
[349] "subtype6" "subtype5" "subtype8" "subtype1" "subtype1" "subtype8"
[355] "subtype8" "subtype1" "subtype2" "subtype1" "subtype4" "subtype7"
[361] "subtype7" "subtype8" "subtype5" "subtype7" "subtype8" "subtype3"
[367] "subtype4" "subtype7" "subtype1" "subtype4" "subtype1" "subtype2"
[373] "subtype7" "subtype7" "subtype5" "subtype2" "subtype5" "subtype1"
[379] "subtype1" "subtype1" "subtype6" "subtype3" "subtype1" "subtype5"
[385] "subtype7" "subtype1" "subtype7" "subtype7" "subtype8" "subtype7"
[391] "subtype7" "subtype7" "subtype5" "subtype1" "subtype1" "subtype5"
[397] "subtype4" "subtype7" "subtype7" "subtype7" "subtype6" "subtype4"
[403] "subtype8" "subtype4" "subtype7" "subtype3" "subtype4" "subtype1"
[409] "subtype7" "subtype1" "subtype5" "subtype4" "subtype1" "subtype7"
[415] "subtype5" "subtype5" "subtype4" "subtype3" "subtype1" "subtype7"
[421] "subtype8" "subtype5" "subtype8" "subtype4" "subtype5" "subtype5"
[427] "subtype2" "subtype5" "subtype6" "subtype1" "subtype1" "subtype5"
[433] "subtype1" "subtype3" "subtype4" "subtype4" "subtype8" "subtype7"
[439] "subtype4" "subtype1" "subtype1" "subtype5" "subtype8" "subtype1"
[445] "subtype1" "subtype7" "subtype5" "subtype7" "subtype3" "subtype4"
[451] "subtype1" "subtype5" "subtype2" "subtype4" "subtype1" "subtype1"
[457] "subtype5" "subtype1" "subtype4" "subtype4" "subtype6" "subtype4"
[463] "subtype5" "subtype3" "subtype7" "subtype1" "subtype7" "subtype4"
[469] "subtype4" "subtype1" "subtype7" "subtype7" "subtype2" "subtype1"
[475] "subtype7" "subtype2" "subtype7" "subtype7" "subtype7" "subtype7"
[481] "subtype8" "subtype1" "subtype7" "subtype1" "subtype1" "subtype1"
[487] "subtype4" "subtype5" "subtype2" "subtype7" "subtype4" "subtype8"
[493] "subtype8" "subtype7"
D1V2, continuous
D1V3, binary
          cls
clus         0   1
  subtype1 122   4
  subtype2  39   0
  subtype3  22   1
  subtype4 100   0
  subtype5  74   0
  subtype6  19   1
  subtype7 104   0
  subtype8  40   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  122    4
  subtype2   39    0
  subtype3   22    1
  subtype4  100    0
  subtype5   74    0
  subtype6   19    1
  subtype7  104    0
  subtype8   40    0
D1V4, binary
          cls
clus        0  1
  subtype1 33 93
  subtype2 11 28
  subtype3  5 18
  subtype4 34 66
  subtype5 21 53
  subtype6  5 15
  subtype7 28 76
  subtype8 11 29
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   33   93
  subtype2   11   28
  subtype3    5   18
  subtype4   34   66
  subtype5   21   53
  subtype6    5   15
  subtype7   28   76
  subtype8   11   29
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 121   1   4
  subtype2        1  37   1   0
  subtype3        0  21   2   0
  subtype4        0  96   3   1
  subtype5        0  70   3   1
  subtype6        0  19   0   1
  subtype7        1  95   3   5
  subtype8        0  37   1   2
D1V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 28       1      23 17  24   5   0    6  7   7  1   3   0  4
  subtype2  3       4       7  3   9   2   0    2  4   1  1   2   0  1
  subtype3  2       0       5  3   2   1   0    0  5   3  0   1   0  1
  subtype4 34       3      26 12   6   4   1    1  5   3  1   3   1  0
  subtype5 14       0      10 13  10   2   0    1  6   8  4   4   0  2
  subtype6  6       0       5  1   3   0   0    1  1   2  0   0   0  1
  subtype7 35       7      20  5  17   4   1    2  4   3  2   3   0  1
  subtype8 16       1       5  4   6   2   0    0  0   2  1   2   0  1
D1V6, multiclass
D1V7, continuous
D1V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1       6        9        4        38        35         21          6
  subtype2       2        3        0        11        10          8          0
  subtype3       1        1        0         7         3          6          2
  subtype4       7       10        0        45        19          9          1
  subtype5       4        2        0        21        19         15          2
  subtype6       3        2        0         6         4          4          0
  subtype7      13       13        0        42        14          9          4
  subtype8       6        1        2        15         6          5          0
          vv
clus       STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1          3        1         0       3
  subtype2          2        1         1       1
  subtype3          0        2         0       1
  subtype4          4        3         0       2
  subtype5          6        3         0       2
  subtype6          0        0         0       1
  subtype7          2        3         0       4
  subtype8          2        1         0       2
D1V9, multiclass

Clustering(2) Variable = MRNA_CHIERARCHICAL
D2V1, survival
          sevent
clus2        0   1
  subtype1 126  14
  subtype2 102  18
  subtype3 201  33
subtype1 subtype2 subtype3 
     140      120      234 
subtype1 subtype2 subtype3 
      14       18       33 
$subtype1
TCGA-A1-A0SE TCGA-A1-A0SH TCGA-A2-A04N TCGA-A2-A0CL TCGA-A2-A0CP TCGA-A2-A0CV 
       43.40        47.24       103.66        60.07        82.03        61.48 
TCGA-A2-A0CZ TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ES TCGA-A2-A0EV TCGA-A2-A0EW 
       43.99        82.68        71.70        32.91        17.92        25.32 
TCGA-A2-A0EX TCGA-A2-A0SY TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YD 
       18.05        37.94        12.99        11.31        13.05        18.08 
TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A7-A0CG TCGA-A7-A0DB TCGA-A8-A07E 
       11.77        10.98         8.81         5.46         4.60        19.99 
TCGA-A8-A07G TCGA-A8-A07J TCGA-A8-A08O TCGA-A8-A08Z TCGA-A8-A097 TCGA-A8-A09A 
       18.94        12.00        30.97        40.01        12.00         9.99 
TCGA-A8-A09D TCGA-A8-A0A1 TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-AN-A046 
       13.02        12.00        19.00        13.02        21.04         0.33 
TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0FW TCGA-AN-A0XL TCGA-AN-A0XS TCGA-AN-A0XV 
        7.17         6.28         0.36         0.33         0.33         5.33 
TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A0J5 TCGA-AO-A0J9 
       80.28        47.84        56.12        39.02        24.16        41.26 
TCGA-AO-A0JA TCGA-AO-A0JB TCGA-AO-A0JC TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JJ 
       11.38        37.81        50.86        11.64        14.76        49.71 
TCGA-AO-A126 TCGA-AO-A12A TCGA-AO-A12E TCGA-AO-A12G TCGA-AR-A0TT TCGA-AR-A1AK 
       93.70        90.54        57.27        41.59        55.20        51.22 
TCGA-AR-A1AL TCGA-AR-A1AN TCGA-AR-A1AP TCGA-AR-A1AU TCGA-AR-A1AV TCGA-AR-A1AX 
       48.82        43.69        39.95        46.32        42.58        36.26 
TCGA-B6-A0IE TCGA-B6-A0IH TCGA-B6-A0IN TCGA-B6-A0IP TCGA-B6-A0RQ TCGA-B6-A0RV 
       65.69       112.37        84.59       110.93       140.48       157.41 
TCGA-B6-A0WS TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0AZ 
       97.48       113.75        58.88        24.53        25.55        28.50 
TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0BC TCGA-BH-A0BD 
       46.92        37.74        39.16        48.36        32.02        18.21 
TCGA-BH-A0BF TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ 
       25.68        21.70        36.72        35.67        48.69        27.16 
TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DO 
       48.13        31.17        23.44        22.13        13.91        17.26 
TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0DX TCGA-BH-A0E9 
       15.65         3.22         2.53        38.47        47.41        46.19 
TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0H5 TCGA-BH-A0H7 TCGA-BH-A0HA 
       32.65        24.43        30.15        35.51        23.05        28.14 
TCGA-BH-A0HF TCGA-BH-A0HK TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0W4 TCGA-BH-A0W5 
       23.90         5.85        13.61        36.85         5.75        17.85 
TCGA-BH-A0W7 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18M TCGA-BH-A18R TCGA-BH-A1EO 
       18.35         8.81         7.23        72.56        37.51        91.99 
TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EW TCGA-D8-A141 TCGA-D8-A145 TCGA-D8-A146 
       82.85        42.28        55.69         3.72         1.61        11.31 
TCGA-E2-A108 TCGA-E2-A10F TCGA-E2-A14T TCGA-E2-A14Z TCGA-E2-A15C TCGA-E2-A15D 
        4.08        11.84        29.26        17.03        16.31        10.36 
TCGA-E2-A15E TCGA-E2-A15I TCGA-E2-A15K TCGA-E2-A15M TCGA-E2-A15P TCGA-E2-A1B1 
       17.00        13.51         1.12         7.69        10.36        44.75 
TCGA-E2-A1B6 TCGA-E2-A1BC 
       11.11         9.76 

$subtype2
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        64.11 
TCGA-A2-A04U TCGA-A2-A04X TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0CY TCGA-A2-A0D0 
       22.03        44.35        24.79        42.84        42.35        21.14 
TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0ST TCGA-A2-A0SW TCGA-A2-A0SX 
       25.84        25.02        67.50        54.02        44.84        42.35 
TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM 
       11.08        10.59         7.96         8.28        10.72        21.73 
TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A07C TCGA-A8-A07O 
        8.32        12.26         8.78         9.44        19.07         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08L TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09X 
        8.98         9.96         9.99         0.99        33.99        14.01 
TCGA-A8-A0A7 TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AR TCGA-AN-A0AT 
        0.99         1.78         1.71         6.48         0.30         0.33 
TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FX TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U 
        7.92         7.56         0.33         0.53         0.33        59.05 
TCGA-AO-A0J2 TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 
       19.23         9.67        25.48        64.60        43.36       102.54 
TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F TCGA-AQ-A04J TCGA-AR-A0TP 
       94.59        96.10        64.04        48.36         5.23        78.64 
TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH 
       37.41        11.84         0.49         0.26        53.49        75.55 
TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AT 
       61.84        52.73        43.53        43.04        17.19        41.82 
TCGA-AR-A1AY TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IQ 
       20.19       125.79        32.58       176.98        18.77       127.27 
TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0X1 
      211.53       100.67        89.46       131.21        21.47       186.44 
TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BG 
       38.79        20.45        39.55        56.98        51.68        24.85 
TCGA-BH-A0BL TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 
       44.02        53.65        11.67        48.23         4.37         9.60 
TCGA-BH-A0EE TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18K TCGA-BH-A18Q 
       31.00         5.59        12.23         2.01        90.81        55.63 
TCGA-BH-A18V TCGA-BH-A1F0 TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 
       51.12        25.81         8.68         6.90         2.01         5.65 
TCGA-D8-A147 TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Y 
        0.07        44.38        16.01        27.78        22.75        22.62 
TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B5 
       19.43        14.79        16.93        64.57        41.79        25.45 

$subtype3
TCGA-A1-A0SD TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04W 
       14.37        14.01         7.96        77.72        63.12        63.06 
TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU TCGA-A2-A0CW 
       25.08        78.64        75.55        63.02         5.16        57.53 
TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU 
       24.20        16.31        90.64        62.53        26.53        24.10 
TCGA-A2-A0EY TCGA-A2-A0SU TCGA-A2-A0SV TCGA-A2-A0T3 TCGA-A2-A0T5 TCGA-A2-A0YC 
       15.95        44.42        27.12        14.99        10.55        21.14 
TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A7-A0CD TCGA-A7-A0CH 
        9.50        13.28        12.46        23.77         5.59         5.29 
TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A13F TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q 
        6.18         5.23         6.44        13.02        13.02         1.02 
TCGA-A8-A06R TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z 
       17.95        41.06        29.00        31.00        26.01         1.02 
TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07F TCGA-A8-A07I 
       17.00        53.95         9.01        33.01        18.94        14.01 
TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07W TCGA-A8-A07Z TCGA-A8-A082 
       17.00        10.98         7.96         9.99        28.04        18.05 
TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08B TCGA-A8-A08C 
       15.06        36.95        13.02         0.99        23.08        19.96 
TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08P TCGA-A8-A08S 
       18.05        19.92        12.00        37.05        30.97        19.07 
TCGA-A8-A08T TCGA-A8-A091 TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A099 
       93.04        19.07        16.01        17.92        41.95         9.99 
TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09E TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M 
       12.00         1.02        30.97        33.07        29.95        15.02 
TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09W 
        1.02        25.02         8.98        19.00        15.02         0.99 
TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 
       13.02        17.00        38.04         0.33         0.33         0.23 
TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS 
        0.62         2.93         7.99         7.33         0.16         0.30 
TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FY 
        6.41         4.60         6.97         6.02         0.33         0.33 
TCGA-AN-A0FZ TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XT 
        0.33         0.33        12.33         0.30         0.33         0.33 
TCGA-AN-A0XW TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A03V TCGA-AO-A0J3 
        5.59        54.08        81.63        84.69        29.13         9.93 
TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0JD TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A125 
        8.55         9.11        59.61        38.53        60.03        99.22 
TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12H TCGA-AQ-A04H TCGA-AQ-A04L TCGA-AR-A0TQ 
       77.56        65.52        28.34        14.43       109.94        49.32 
TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U2 
        5.26        29.72        24.30        55.86        43.17        83.87 
TCGA-AR-A0U3 TCGA-AR-A1AS TCGA-AR-A1AW TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0I9 
       74.40        40.83        35.24       149.56        24.62        12.13 
TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IG TCGA-B6-A0IM TCGA-B6-A0IO 
      220.87       129.57        50.70       146.50       126.12       110.14 
TCGA-B6-A0RG TCGA-B6-A0RH TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN 
       68.45       188.98       223.40        81.17        78.02       172.96 
TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WZ 
      162.02       102.77       177.40        79.63        17.95       129.57 
TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-BH-A0B8 TCGA-BH-A0BA TCGA-BH-A0BS 
      129.70        28.24        68.94        51.58        37.22        53.92 
TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0C1 TCGA-BH-A0C7 
       45.57        49.94        49.05        41.75        43.99        42.90 
TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DZ TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E7 
       45.80        38.01        16.27        15.68        12.36        44.78 
TCGA-BH-A0EB TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H3 TCGA-BH-A0H6 TCGA-BH-A0H9 
       24.49        10.78        15.16        37.78        24.56        41.00 
TCGA-BH-A0HB TCGA-BH-A0HI TCGA-BH-A0HO TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX 
       26.50        20.35         2.50        12.89        51.29        27.25 
TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A18J TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18P 
       28.50         5.92        20.09        26.66        37.74        30.28 
TCGA-BH-A18S TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A1ES TCGA-BH-A1EV TCGA-C8-A137 
       66.05         7.36        51.39       113.82        12.00         0.85 
TCGA-C8-A138 TCGA-C8-A1HI TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN TCGA-D8-A140 
        0.23         0.07         0.07         0.20         0.07         0.89 
TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B 
       38.24        51.12        25.08        38.53        11.57        24.59 
TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A14O TCGA-E2-A14Q TCGA-E2-A14S TCGA-E2-A14V 
       28.04        13.74        38.53        32.02        27.42        24.59 
TCGA-E2-A14W TCGA-E2-A152 TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 
       27.39        19.33        19.27        10.68        18.18        15.81 
TCGA-E2-A15A TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15J TCGA-E2-A15L 
       16.50        15.39        10.36         1.38        15.22        10.88 
TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BD 
       12.99        10.85         9.01         8.78        29.95        10.42 

subtype1 subtype2 subtype3 
    0.33     0.07     0.07 
subtype1 subtype2 subtype3 
  157.41   211.53   223.40 
subtype1 subtype2 subtype3 
   26.42    23.77    20.22 
[1] "0.3 - 157.4 (26.4)" "0.1 - 211.5 (23.8)" "0.1 - 223.4 (20.2)"
  [1] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [79] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[103] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[169] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[211] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[307] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[313] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[319] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[331] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[367] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[385] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[433] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[451] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[457] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[463] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[469] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[475] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[481] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[493] "subtype1" "subtype3"
  [1] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [79] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[103] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[169] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[211] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[307] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[313] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[319] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[331] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[367] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[385] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[433] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[451] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[457] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[463] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[469] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[475] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[481] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[493] "subtype1" "subtype3"
  [1] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [79] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[103] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[169] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[211] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[307] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[313] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[319] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[331] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[367] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[385] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[433] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[451] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[457] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[463] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[469] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[475] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[481] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[493] "subtype1" "subtype3"
D2V2, continuous
D2V3, binary
          cls
clus         0   1
  subtype1 141   2
  subtype2 131   0
  subtype3 248   4
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  141    2
  subtype2  131    0
  subtype3  248    4
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      141      131      248
  MALE          2        0        4
D2V4, binary
          cls
clus         0   1
  subtype1  42 101
  subtype2  45  86
  subtype3  61 191
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   42  101
  subtype2   45   86
  subtype3   61  191
     clus
vv    subtype1 subtype2 subtype3
  NO        42       45       61
  YES      101       86      191
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        2 134   2   5
  subtype2        0 126   4   1
  subtype3        0 236   8   8
D2V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 36       9      27 14  24   4   0    1  8   8  3   5   0  4
  subtype2 38       3      33 18  10   4   1    1  8   6  3   5   1  0
  subtype3 64       4      41 26  43  12   1   11 16  15  4   8   0  7
D2V6, multiclass
D2V7, continuous
D2V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1      17       12        2        50        24         23          1
  subtype2       8       12        0        56        25         13          2
  subtype3      17       17        4        79        61         41         12
          vv
clus       STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1          5        2         1       6
  subtype2          8        4         0       3
  subtype3          6        8         0       7
D2V9, multiclass

Clustering(3) Variable = CN_CNMF
D3V1, survival
          sevent
clus2        0   1
  subtype1 263  29
  subtype2 180  21
  subtype3  58   8
  subtype4 168  27
  subtype5  35   9
subtype1 subtype2 subtype3 subtype4 subtype5 
     292      201       66      195       44 
subtype1 subtype2 subtype3 subtype4 subtype5 
      29       21        8       27        9 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH TCGA-A2-A04N TCGA-A2-A04Q 
        8.52        48.10        14.24        47.24       103.66        41.92 
TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CL TCGA-A2-A0CP TCGA-A2-A0CQ 
       63.12        63.06        25.08        60.07        82.03        78.64 
TCGA-A2-A0D1 TCGA-A2-A0D3 TCGA-A2-A0EM TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ES 
       25.84        24.20        90.64        82.68        71.70        32.91 
TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0ST TCGA-A2-A0SU TCGA-A2-A0SY TCGA-A2-A0T1 
       25.32        18.05        54.02        44.42        37.94        10.59 
TCGA-A2-A0T5 TCGA-A2-A0T6 TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YH TCGA-A2-A0YI 
       10.55        11.31        18.08         9.50        12.46        11.77 
TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FZ TCGA-A2-A1G4 TCGA-A2-A1G6 TCGA-A2-A259 
       10.98         8.81        13.45        12.23         4.34        42.25 
TCGA-A2-A25A TCGA-A2-A25C TCGA-A2-A25F TCGA-A2-A3KD TCGA-A7-A0CG TCGA-A7-A0CH 
       97.58         9.37         3.72        26.40         5.46         5.29 
TCGA-A7-A0D9 TCGA-A7-A13G TCGA-A7-A26E TCGA-A7-A26F TCGA-A7-A26H TCGA-A7-A3IY 
        5.23         6.84        13.84         8.45         2.10         4.96 
TCGA-A7-A3J0 TCGA-A7-A3J1 TCGA-A7-A3RF TCGA-A8-A06P TCGA-A8-A07E TCGA-A8-A07J 
        2.50         2.47         1.78        13.02        19.99        12.00 
TCGA-A8-A07S TCGA-A8-A08A TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A095 TCGA-A8-A09T 
        7.96         0.99        93.04        40.01        41.95        19.00 
TCGA-A8-A09V TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AC-A23E TCGA-AC-A23G TCGA-AC-A2B8 
       15.02        14.01         0.99         2.37        10.82         1.45 
TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FO TCGA-AC-A2QI 
        1.45        55.40        36.99        38.79        50.70         0.92 
TCGA-AC-A2QJ TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3TN TCGA-AN-A046 TCGA-AN-A0FF 
        2.27         0.99         0.69         1.12         0.33         4.60 
TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0XO TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AN-A0XV 
        7.17         6.28        12.33         0.33         0.33         5.33 
TCGA-AO-A03U TCGA-AO-A0J5 TCGA-AO-A0J8 TCGA-AO-A0JA TCGA-AO-A0JC TCGA-AO-A0JF 
       59.05        24.16         9.11        11.38        50.86        11.64 
TCGA-AO-A0JJ TCGA-AO-A125 TCGA-AO-A128 TCGA-AO-A12A TCGA-AO-A12B TCGA-AO-A12H 
       49.71        99.22        94.59        90.54        77.56        28.34 
TCGA-AO-A1KO TCGA-AQ-A1H3 TCGA-AR-A0TS TCGA-AR-A0TX TCGA-AR-A1AJ TCGA-AR-A1AL 
       14.73         5.33        37.41         0.49        52.73        48.82 
TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AS TCGA-AR-A1AU 
       43.69        43.53        43.04        17.19        40.83        46.32 
TCGA-AR-A1AW TCGA-AR-A1AX TCGA-AR-A24K TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24O 
       35.24        36.26        50.89        65.42        68.19        65.65 
TCGA-AR-A24P TCGA-AR-A24T TCGA-AR-A24U TCGA-AR-A24W TCGA-AR-A24X TCGA-AR-A252 
        0.85        53.26        53.36        50.96        48.16        40.64 
TCGA-AR-A2LE TCGA-AR-A2LH TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO TCGA-AR-A2LQ 
      128.65        20.22        40.01        17.06        20.81        16.96 
TCGA-B6-A0I5 TCGA-B6-A0IC TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IP TCGA-B6-A0RI 
      149.56        50.70       126.12        84.59       110.93       223.40 
TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RQ TCGA-B6-A0RT TCGA-B6-A0RV TCGA-B6-A0WT 
       78.02       172.96       140.48        89.46       157.41       177.40 
TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A0X7 TCGA-B6-A1KI 
      129.57       129.70        28.24        68.94        58.88        48.10 
TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B7 TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO 
       28.50        46.92        56.98        21.70        36.72        35.67 
TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BZ TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG 
       27.16        53.92        49.05        48.13        31.17        23.44 
TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DO TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX 
       38.01        13.91        17.26        38.47        45.17        47.41 
TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0EA TCGA-BH-A0EB TCGA-BH-A0EE TCGA-BH-A0H3 
       15.68        44.78        32.65        24.49        31.00        37.78 
TCGA-BH-A0H5 TCGA-BH-A0H6 TCGA-BH-A0HA TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HO 
       35.51        24.56        28.14        20.35         5.85         2.50 
TCGA-BH-A0HP TCGA-BH-A0RX TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18F 
       13.61         5.59         5.75        17.85        18.35         8.81 
TCGA-BH-A18G TCGA-BH-A18J TCGA-BH-A18M TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EU 
        2.01        20.09        72.56       113.82        82.85        42.28 
TCGA-BH-A1EX TCGA-BH-A1F0 TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FG TCGA-BH-A1FH 
       49.58        25.81       120.62        74.73       122.89        36.92 
TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FR TCGA-BH-A1FU TCGA-BH-A28O TCGA-C8-A1HI 
       63.35        55.00       144.59        72.07        10.62         0.07 
TCGA-C8-A26V TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A275 TCGA-D8-A141 TCGA-D8-A145 
        0.30         0.36         0.43         0.03         3.72         1.61 
TCGA-D8-A146 TCGA-D8-A1J8 TCGA-D8-A1JH TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JS 
       11.31         8.42         9.34         9.01         7.13         3.45 
TCGA-D8-A1JU TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XG 
        3.48         2.79         8.94         6.61         2.66         6.44 
TCGA-D8-A1XM TCGA-D8-A1XO TCGA-D8-A1XV TCGA-D8-A27E TCGA-D8-A27I TCGA-D8-A27K 
        7.17         7.96         4.80         5.98         6.08         3.88 
TCGA-D8-A27L TCGA-D8-A27P TCGA-D8-A27T TCGA-E2-A108 TCGA-E2-A10A TCGA-E2-A10F 
        4.11         0.76         4.44         4.08        11.57        11.84 
TCGA-E2-A14N TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A14Y TCGA-E2-A155 TCGA-E2-A156 
       44.38        32.02        27.55        22.62        18.18        15.81 
TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L 
       16.31        10.36        13.51        15.22         1.12        10.88 
TCGA-E2-A15M TCGA-E2-A1B1 TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1B6 TCGA-E2-A1BC 
        7.69        44.75        29.95        25.45        11.11         9.76 
TCGA-E2-A1IF TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IU TCGA-E2-A1L6 
       31.43        23.84        17.03         0.46         4.18        43.13 
TCGA-E2-A1L9 TCGA-E2-A1LB TCGA-E2-A3DX TCGA-E9-A1R3 TCGA-E9-A1R4 TCGA-E9-A1RA 
       12.76        31.96         7.13         2.10         0.95         0.95 
TCGA-E9-A1RD TCGA-E9-A1RI TCGA-E9-A227 TCGA-E9-A243 TCGA-E9-A245 TCGA-E9-A248 
        0.66         1.58         0.79         1.41         0.82         0.69 
TCGA-E9-A24A TCGA-E9-A2JT TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J2 
        0.33         0.76        35.57         8.48         8.55         4.57 
TCGA-EW-A1OX TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1P6 TCGA-EW-A1P7 TCGA-EW-A1PE 
       18.48        30.21        32.45        10.26        20.88         3.48 
TCGA-EW-A1PG TCGA-EW-A2FR TCGA-EW-A3E8 TCGA-GI-A2C8 TCGA-GM-A2DA TCGA-GM-A2DB 
       28.77        36.82        21.27         6.97       194.27        53.10 
TCGA-GM-A2DD TCGA-GM-A2DH TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM 
       43.04        42.28        61.91        62.33        90.81        76.64 
TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NY TCGA-LL-A442 
       77.33        53.33        24.43         3.58 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04R 
       14.37        14.01         7.96        39.32        18.18        77.72 
TCGA-A2-A04X TCGA-A2-A0CT TCGA-A2-A0D4 TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EV 
       44.35        63.02        16.31        62.53        26.53        17.92 
TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YG TCGA-A2-A0YT 
       14.99        12.99        13.05        21.14        13.28        23.77 
TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A25E TCGA-A2-A3KC TCGA-A7-A0CD TCGA-A7-A0CJ 
        7.27        30.74        82.55        11.93         5.59         6.18 
TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3IZ TCGA-A8-A06O TCGA-A8-A06Q TCGA-A8-A06T 
        2.20         5.95         4.87        13.02         1.02        41.06 
TCGA-A8-A06U TCGA-A8-A06Z TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07G 
       29.00         1.02        53.95         9.01        33.01        18.94 
TCGA-A8-A07I TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07W TCGA-A8-A085 TCGA-A8-A086 
       14.01        17.00        10.98         9.99        36.95        13.02 
TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08O TCGA-A8-A08P 
       18.05        19.92        12.00        37.05        30.97        30.97 
TCGA-A8-A08S TCGA-A8-A097 TCGA-A8-A09C TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M 
       19.07        12.00         1.02        33.07        29.95        15.02 
TCGA-A8-A09R TCGA-A8-A09W TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0A9 TCGA-A8-A0AD 
        8.98         0.99        13.02        21.04        13.02        38.04 
TCGA-AC-A23H TCGA-AC-A2BM TCGA-AC-A2FM TCGA-AC-A3OD TCGA-AN-A041 TCGA-AN-A049 
        2.66        38.20        26.04         1.15         0.23         0.62 
TCGA-AN-A04A TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0XL TCGA-AN-A0XW TCGA-AO-A03L 
        2.93         0.33         0.36         0.33         5.59        80.28 
TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A03T TCGA-AO-A0J2 TCGA-AO-A0J3 TCGA-AO-A0JD 
       81.63        84.69        39.02        19.23         9.93        59.61 
TCGA-AO-A0JE TCGA-AO-A0JG TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A126 TCGA-AO-A12E 
       64.60        14.76        38.53        60.03        93.70        57.27 
TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A1H2 TCGA-AR-A0TQ 
       49.94         0.53        17.79        14.43         7.56        49.32 
TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A1AK TCGA-AR-A1AP TCGA-AR-A24L TCGA-AR-A24R 
       43.17        83.87        51.22        39.95        73.02        57.37 
TCGA-AR-A24V TCGA-AR-A250 TCGA-AR-A254 TCGA-AR-A255 TCGA-AR-A2LK TCGA-AR-A2LL 
       54.18        56.12        39.85        34.78        42.84         7.33 
TCGA-B6-A0I9 TCGA-B6-A0IG TCGA-B6-A0RG TCGA-B6-A0RL TCGA-B6-A0RO TCGA-B6-A0WV 
       12.13       146.50        68.45        81.17       162.02        79.63 
TCGA-B6-A0WW TCGA-B6-A0X1 TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0B4 TCGA-BH-A0BC 
       17.95       186.44       109.48        24.53        39.16        32.02 
TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DI TCGA-BH-A0DQ TCGA-BH-A0DZ TCGA-BH-A0E2 
       42.90        45.80        22.13         3.22        16.27        12.36 
TCGA-BH-A0EI TCGA-BH-A0H7 TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 
       24.43        23.05        51.29        27.25        28.50         5.92 
TCGA-BH-A18I TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A18U 
        7.23        26.66        37.74        37.51        66.05        51.39 
TCGA-BH-A1EN TCGA-BH-A1EW TCGA-BH-A1F2 TCGA-BH-A1F8 TCGA-BH-A1FM TCGA-BH-A201 
       67.46        55.69        31.53        24.62        45.63         6.87 
TCGA-C8-A137 TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A 
        0.85         0.23         0.07         0.13         0.20        12.20 
TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A1J9 TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE 
        8.68         0.89         8.15         5.85         8.98         1.87 
TCGA-D8-A1JI TCGA-D8-A1JT TCGA-D8-A1X9 TCGA-D8-A1XF TCGA-D8-A1XS TCGA-D8-A1XY 
        0.69         4.04        12.49         6.48         1.64         2.66 
TCGA-D8-A1Y0 TCGA-D8-A27G TCGA-D8-A27N TCGA-D8-A27R TCGA-D8-A27W TCGA-E2-A105 
        5.46         6.87         4.77         2.96         0.49        38.24 
TCGA-E2-A109 TCGA-E2-A10E TCGA-E2-A14O TCGA-E2-A14P TCGA-E2-A14S TCGA-E2-A14T 
       38.53        13.74        38.53        16.01        27.42        29.26 
TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A152 TCGA-E2-A15A TCGA-E2-A15E TCGA-E2-A15H 
       24.59        27.39        19.33        16.50        17.00         1.38 
TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1IE TCGA-E2-A1IG 
       12.99        10.36         9.01         8.78        32.32        24.82 
TCGA-E2-A1IH TCGA-E2-A1LA TCGA-E9-A1R2 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RE 
       21.63        15.22         0.62         2.76         1.12         1.55 
TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A247 TCGA-E9-A295 TCGA-E9-A2JS TCGA-EW-A1IW 
        1.25         1.15         0.39         0.69         0.43         8.28 
TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OY TCGA-EW-A1P5 TCGA-EW-A1PD 
        8.28         7.46        19.56        19.50        12.00         5.72 
TCGA-EW-A2FS TCGA-EW-A2FW TCGA-GM-A3NW 
       38.56         6.25        98.04 

$subtype3
TCGA-A1-A0SE TCGA-A1-A0SI TCGA-A2-A0CS TCGA-A2-A0CV TCGA-A2-A0CX TCGA-A7-A0DB 
       43.40        20.84        75.55        61.48        42.84         4.60 
TCGA-A7-A26I TCGA-A8-A06Y TCGA-A8-A07F TCGA-A8-A07Z TCGA-A8-A084 TCGA-A8-A08C 
        4.01        26.01        18.94        28.04        15.06        19.96 
TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09E TCGA-A8-A0A1 
       16.01        17.92         9.99        12.00        30.97        12.00 
TCGA-A8-A0A2 TCGA-A8-A0AB TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A0FK TCGA-AN-A0XP 
       19.00        17.00         0.33         0.33         6.97         0.30 
TCGA-AO-A03N TCGA-AO-A0J7 TCGA-AO-A0J9 TCGA-AR-A0TR TCGA-AR-A1AV TCGA-B6-A0IB 
       54.08         8.55        41.26         5.26        42.58       129.57 
TCGA-B6-A0IH TCGA-B6-A0RH TCGA-B6-A0RP TCGA-BH-A0B5 TCGA-BH-A0BA TCGA-BH-A0BD 
      112.37       188.98       102.77        48.36        37.22        18.21 
TCGA-BH-A0BV TCGA-BH-A0C1 TCGA-BH-A0DP TCGA-BH-A0E9 TCGA-BH-A0GZ TCGA-BH-A0HQ 
       49.94        43.99        15.65        46.19        10.78        36.85 
TCGA-BH-A0HU TCGA-BH-A18K TCGA-BH-A18P TCGA-BH-A1EV TCGA-BH-A202 TCGA-BH-A28Q 
       12.89        90.81        30.28        12.00         0.72         6.44 
TCGA-C8-A274 TCGA-D8-A1JA TCGA-D8-A1XR TCGA-D8-A27V TCGA-E2-A107 TCGA-E2-A10B 
        0.03         0.59         5.52         2.40        25.08        24.59 
TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A15G TCGA-E2-A1BD TCGA-E2-A1L8 TCGA-E2-A2P6 
       19.27        10.68        10.36        10.42        33.37         5.49 
TCGA-E9-A1R5 TCGA-E9-A1RC TCGA-E9-A249 TCGA-E9-A3HO TCGA-EW-A1PC TCGA-GM-A2D9 
        1.38        40.37         0.92         0.62         6.12        59.57 

$subtype4
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U 
       31.79        28.01        19.17        17.98        64.11        22.03 
TCGA-A2-A0CM TCGA-A2-A0CW TCGA-A2-A0D0 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0EY 
       24.79        57.53        21.14        25.02        67.50        15.95 
TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YE 
       27.12        44.84        42.35        11.08         7.96         8.28 
TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A25B TCGA-A7-A0CE TCGA-A7-A0DA 
       10.72        21.73        12.20         8.48         8.32        12.26 
TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26G TCGA-A8-A06R TCGA-A8-A06X TCGA-A8-A075 
        8.78         9.44         6.87        17.95        31.00        17.00 
TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08B TCGA-A8-A08L TCGA-A8-A08R 
        9.99         8.98         9.96        23.08         9.99         0.99 
TCGA-A8-A08X TCGA-A8-A09A TCGA-A8-A09D TCGA-A8-A09N TCGA-A8-A09Q TCGA-AC-A23C 
       33.99         9.99        13.02         1.02        25.02         0.95 
TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AJ TCGA-AN-A0AK 
       38.53         1.02         1.78         1.71         7.99         7.33 
TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FD 
        6.48         0.16         0.30         0.30         0.33         6.41 
TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FT TCGA-AN-A0FX TCGA-AN-A0FY TCGA-AN-A0FZ 
        7.92         7.56         6.02         0.33         0.33         0.33 
TCGA-AN-A0XN TCGA-AN-A0XT TCGA-AN-A0XU TCGA-AO-A03M TCGA-AO-A03V TCGA-AO-A0J4 
        0.33         0.33         0.33        47.84        29.13         9.67 
TCGA-AO-A0J6 TCGA-AO-A0JB TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D 
       25.48        37.81        43.36       102.54        96.10        64.04 
TCGA-AO-A12F TCGA-AO-A12G TCGA-AO-A1KR TCGA-AQ-A04J TCGA-AQ-A04L TCGA-AQ-A0Y5 
       48.36        41.59        70.36         5.23       109.94         5.62 
TCGA-AR-A0TP TCGA-AR-A0TT TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U0 
       78.64        55.20        29.72        24.30        55.86         0.26 
TCGA-AR-A0U1 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AY TCGA-AR-A24H 
        6.08        53.49        75.55        61.84        20.19       109.58 
TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A24Z TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR 
       66.02        62.07        51.75        45.14        93.83        20.38 
TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0IE TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IO 
       77.62       125.79        65.69       176.98        18.77       110.14 
TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RU TCGA-B6-A0WY TCGA-B6-A1KF 
      127.27       211.53       100.67       131.21       113.75       101.52 
TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B6 TCGA-BH-A0B9 TCGA-BH-A0BF 
       38.79        20.45        39.55        56.94        51.68        25.68 
TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0C0 
       24.85        44.02        48.69        53.65        11.67        41.75 
TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0GY TCGA-BH-A0H9 TCGA-BH-A0WA TCGA-BH-A18Q 
        4.37         9.60        30.15        41.00        12.23        55.63 
TCGA-BH-A18T TCGA-BH-A18V TCGA-BH-A1EY TCGA-BH-A1F6 TCGA-BH-A1FN TCGA-BH-A203 
        7.36        51.12        17.69        97.48        72.07        38.60 
TCGA-BH-A208 TCGA-BH-A209 TCGA-C8-A138 TCGA-C8-A1HJ TCGA-C8-A1HM TCGA-C8-A1HN 
       57.83       130.16         0.23         0.16         0.20         0.07 
TCGA-C8-A26W TCGA-C8-A278 TCGA-C8-A27B TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 
        0.23         0.03         0.99         6.90         2.01         5.65 
TCGA-D8-A147 TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM 
        0.07         3.16         6.15         3.58         8.71         7.82 
TCGA-D8-A1JP TCGA-D8-A1X5 TCGA-D8-A1XA TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL 
        5.49         5.62         9.01        11.57        10.72        10.49 
TCGA-D8-A1XQ TCGA-D8-A1XU TCGA-D8-A1XW TCGA-D8-A1XZ TCGA-D8-A27F TCGA-D8-A27H 
        5.82         4.90         3.85         3.95         7.46         4.60 
TCGA-D8-A27M TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A158 
        4.73        27.78        22.75        17.03        19.43        14.79 
TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1II TCGA-E2-A1IO TCGA-E2-A1L7 TCGA-E2-A1LE 
       16.93        64.57        27.95        14.73        20.81        28.90 
TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LL TCGA-E9-A1RH TCGA-E9-A226 TCGA-E9-A244 
       94.52        90.41        33.34         0.46         0.53         0.66 
TCGA-EW-A1J1 TCGA-EW-A1OV TCGA-EW-A1OW TCGA-EW-A1OZ TCGA-EW-A1P4 TCGA-EW-A1P8 
        9.27        17.16        15.22        30.94        16.47         7.86 
TCGA-EW-A1PA TCGA-EW-A1PB TCGA-EW-A1PF TCGA-EW-A1PH TCGA-EW-A2FV TCGA-EW-A3U0 
        8.78        19.99         4.57         4.57         7.82         7.53 
TCGA-GI-A2C9 TCGA-GM-A2DF TCGA-LL-A441 
       23.11        42.71         2.99 

$subtype5
TCGA-A2-A0CU TCGA-A2-A0EU TCGA-A2-A1FV TCGA-A2-A1G0 TCGA-A2-A25D TCGA-A7-A13F 
        5.16        24.10        15.12        12.49         7.99         6.44 
TCGA-A8-A082 TCGA-A8-A091 TCGA-AO-A03R TCGA-AO-A1KP TCGA-AR-A0U3 TCGA-B6-A0IA 
       18.05        19.07        56.12        82.62        74.40       220.87 
TCGA-B6-A0WS TCGA-B6-A0WX TCGA-B6-A1KC TCGA-B6-A2IU TCGA-BH-A0AY TCGA-BH-A0BT 
       97.48        21.47        43.59       159.12        25.55        45.57 
TCGA-BH-A0DL TCGA-BH-A0DS TCGA-BH-A0H0 TCGA-BH-A0HB TCGA-BH-A1EO TCGA-BH-A1F5 
       48.23         2.53        15.16        26.50        91.99        89.16 
TCGA-BH-A1FC TCGA-BH-A1FD TCGA-BH-A204 TCGA-D8-A1X6 TCGA-D8-A1XD TCGA-D8-A1XT 
      114.12        33.14        83.31         7.76         5.10         6.35 
TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A1Y3 TCGA-E2-A10C TCGA-E2-A15F TCGA-E2-A15R 
        3.78         2.37         4.08        28.04        15.39        10.85 
TCGA-E2-A1B0 TCGA-E2-A1IN TCGA-E2-A1LG TCGA-E2-A1LK TCGA-E2-A2P5 TCGA-E9-A1RB 
       41.79        12.89        11.51         8.75        10.72         0.69 
TCGA-EW-A1P0 TCGA-GM-A2DC 
       36.85        53.52 

subtype1 subtype2 subtype3 subtype4 subtype5 
    0.03     0.07     0.03     0.03     0.69 
subtype1 subtype2 subtype3 subtype4 subtype5 
  223.40   186.44   188.98   211.53   220.87 
subtype1 subtype2 subtype3 subtype4 subtype5 
  20.580   17.000   18.065   17.030   20.270 
[1] "0.0 - 223.4 (20.6)" "0.1 - 186.4 (17.0)" "0.0 - 189.0 (18.1)"
[4] "0.0 - 211.5 (17.0)" "0.7 - 220.9 (20.3)"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
 [13] "subtype4" "subtype2" "subtype1" "subtype4" "subtype1" "subtype2"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype2"
 [31] "subtype5" "subtype3" "subtype4" "subtype3" "subtype4" "subtype1"
 [37] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [43] "subtype4" "subtype2" "subtype1" "subtype2" "subtype5" "subtype2"
 [49] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype4"
 [55] "subtype4" "subtype4" "subtype1" "subtype4" "subtype1" "subtype4"
 [61] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [67] "subtype1" "subtype4" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype4" "subtype1" "subtype1" "subtype4" "subtype2" "subtype5"
 [79] "subtype2" "subtype2" "subtype1" "subtype5" "subtype4" "subtype1"
 [85] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype5"
 [91] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype4"
 [97] "subtype1" "subtype1" "subtype2" "subtype1" "subtype4" "subtype3"
[103] "subtype4" "subtype4" "subtype5" "subtype1" "subtype1" "subtype1"
[109] "subtype4" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[115] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[121] "subtype2" "subtype4" "subtype2" "subtype2" "subtype4" "subtype3"
[127] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype1"
[133] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype4"
[139] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype3"
[145] "subtype5" "subtype3" "subtype2" "subtype2" "subtype1" "subtype4"
[151] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype4"
[157] "subtype2" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[163] "subtype1" "subtype5" "subtype3" "subtype3" "subtype1" "subtype2"
[169] "subtype3" "subtype4" "subtype3" "subtype2" "subtype4" "subtype3"
[175] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype2"
[181] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[187] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[193] "subtype4" "subtype1" "subtype1" "subtype2" "subtype1" "subtype4"
[199] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[205] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[217] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype4"
[223] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[229] "subtype1" "subtype4" "subtype3" "subtype4" "subtype1" "subtype1"
[235] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[241] "subtype2" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[247] "subtype4" "subtype4" "subtype1" "subtype2" "subtype2" "subtype4"
[253] "subtype3" "subtype2" "subtype2" "subtype5" "subtype2" "subtype1"
[259] "subtype4" "subtype2" "subtype2" "subtype4" "subtype1" "subtype4"
[265] "subtype3" "subtype1" "subtype3" "subtype1" "subtype4" "subtype1"
[271] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[277] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype1"
[283] "subtype4" "subtype1" "subtype1" "subtype4" "subtype2" "subtype4"
[289] "subtype4" "subtype1" "subtype1" "subtype5" "subtype2" "subtype4"
[295] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[301] "subtype2" "subtype1" "subtype4" "subtype2" "subtype3" "subtype1"
[307] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype2"
[313] "subtype4" "subtype4" "subtype2" "subtype5" "subtype4" "subtype4"
[319] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[331] "subtype1" "subtype1" "subtype4" "subtype4" "subtype1" "subtype2"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[343] "subtype4" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[349] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype2"
[355] "subtype4" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype4"
[367] "subtype1" "subtype2" "subtype5" "subtype3" "subtype1" "subtype4"
[373] "subtype2" "subtype3" "subtype4" "subtype4" "subtype1" "subtype1"
[379] "subtype4" "subtype1" "subtype4" "subtype4" "subtype2" "subtype3"
[385] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[391] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[397] "subtype1" "subtype2" "subtype2" "subtype5" "subtype4" "subtype1"
[403] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype5"
[409] "subtype4" "subtype1" "subtype2" "subtype5" "subtype2" "subtype4"
[415] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype2"
[421] "subtype3" "subtype4" "subtype1" "subtype4" "subtype3" "subtype2"
[427] "subtype3" "subtype4" "subtype4" "subtype1" "subtype4" "subtype1"
[433] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[439] "subtype3" "subtype4" "subtype1" "subtype4" "subtype3" "subtype1"
[445] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[451] "subtype1" "subtype5" "subtype1" "subtype3" "subtype2" "subtype5"
[457] "subtype1" "subtype1" "subtype1" "subtype2" "subtype4" "subtype1"
[463] "subtype2" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[469] "subtype1" "subtype2" "subtype4" "subtype3" "subtype5" "subtype1"
[475] "subtype1" "subtype1" "subtype2" "subtype4" "subtype1" "subtype5"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[493] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype2"
[499] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[505] "subtype4" "subtype2" "subtype2" "subtype4" "subtype2" "subtype4"
[511] "subtype2" "subtype5" "subtype1" "subtype1" "subtype1" "subtype3"
[517] "subtype2" "subtype1" "subtype4" "subtype1" "subtype2" "subtype5"
[523] "subtype4" "subtype2" "subtype1" "subtype5" "subtype5" "subtype1"
[529] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype4"
[535] "subtype1" "subtype1" "subtype2" "subtype3" "subtype4" "subtype5"
[541] "subtype4" "subtype4" "subtype1" "subtype3" "subtype2" "subtype4"
[547] "subtype1" "subtype4" "subtype2" "subtype2" "subtype4" "subtype4"
[553] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype2"
[559] "subtype3" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[565] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype1"
[571] "subtype1" "subtype4" "subtype1" "subtype2" "subtype3" "subtype2"
[577] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype2"
[583] "subtype1" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[589] "subtype1" "subtype2" "subtype1" "subtype4" "subtype5" "subtype1"
[595] "subtype1" "subtype2" "subtype4" "subtype1" "subtype1" "subtype5"
[601] "subtype2" "subtype1" "subtype4" "subtype4" "subtype4" "subtype1"
[607] "subtype1" "subtype4" "subtype3" "subtype2" "subtype5" "subtype4"
[613] "subtype1" "subtype4" "subtype2" "subtype4" "subtype2" "subtype5"
[619] "subtype5" "subtype5" "subtype1" "subtype4" "subtype2" "subtype4"
[625] "subtype1" "subtype1" "subtype1" "subtype4" "subtype2" "subtype1"
[631] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[637] "subtype1" "subtype2" "subtype1" "subtype3" "subtype5" "subtype2"
[643] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype4"
[649] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype4"
[655] "subtype1" "subtype4" "subtype4" "subtype2" "subtype3" "subtype3"
[661] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype1"
[667] "subtype1" "subtype2" "subtype5" "subtype3" "subtype2" "subtype1"
[673] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[679] "subtype5" "subtype2" "subtype2" "subtype4" "subtype5" "subtype1"
[685] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[691] "subtype1" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[697] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype4"
[703] "subtype3" "subtype1" "subtype2" "subtype1" "subtype4" "subtype5"
[709] "subtype4" "subtype4" "subtype5" "subtype4" "subtype5" "subtype3"
[715] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[721] "subtype2" "subtype1" "subtype5" "subtype3" "subtype1" "subtype2"
[727] "subtype2" "subtype2" "subtype4" "subtype1" "subtype4" "subtype1"
[733] "subtype1" "subtype4" "subtype1" "subtype2" "subtype1" "subtype3"
[739] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[745] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[751] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype2"
[757] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype2"
[763] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype3"
[769] "subtype2" "subtype1" "subtype4" "subtype1" "subtype4" "subtype1"
[775] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype1"
[781] "subtype4" "subtype3" "subtype1" "subtype1" "subtype5" "subtype1"
[787] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[793] "subtype1" "subtype1" "subtype2" "subtype1" "subtype4" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
 [13] "subtype4" "subtype2" "subtype1" "subtype4" "subtype1" "subtype2"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype2"
 [31] "subtype5" "subtype3" "subtype4" "subtype3" "subtype4" "subtype1"
 [37] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [43] "subtype4" "subtype2" "subtype1" "subtype2" "subtype5" "subtype2"
 [49] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype4"
 [55] "subtype4" "subtype4" "subtype1" "subtype4" "subtype1" "subtype4"
 [61] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [67] "subtype1" "subtype4" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype4" "subtype1" "subtype1" "subtype4" "subtype2" "subtype5"
 [79] "subtype2" "subtype2" "subtype1" "subtype5" "subtype4" "subtype1"
 [85] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype5"
 [91] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype4"
 [97] "subtype1" "subtype1" "subtype2" "subtype1" "subtype4" "subtype3"
[103] "subtype4" "subtype4" "subtype5" "subtype1" "subtype1" "subtype1"
[109] "subtype4" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[115] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[121] "subtype2" "subtype4" "subtype2" "subtype2" "subtype4" "subtype3"
[127] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype1"
[133] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype4"
[139] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype3"
[145] "subtype5" "subtype3" "subtype2" "subtype2" "subtype1" "subtype4"
[151] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype4"
[157] "subtype2" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[163] "subtype1" "subtype5" "subtype3" "subtype3" "subtype1" "subtype2"
[169] "subtype3" "subtype4" "subtype3" "subtype2" "subtype4" "subtype3"
[175] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype2"
[181] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[187] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[193] "subtype4" "subtype1" "subtype1" "subtype2" "subtype1" "subtype4"
[199] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[205] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[217] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype4"
[223] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[229] "subtype1" "subtype4" "subtype3" "subtype4" "subtype1" "subtype1"
[235] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[241] "subtype2" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[247] "subtype4" "subtype4" "subtype1" "subtype2" "subtype2" "subtype4"
[253] "subtype3" "subtype2" "subtype2" "subtype5" "subtype2" "subtype1"
[259] "subtype4" "subtype2" "subtype2" "subtype4" "subtype1" "subtype4"
[265] "subtype3" "subtype1" "subtype3" "subtype1" "subtype4" "subtype1"
[271] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[277] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype1"
[283] "subtype4" "subtype1" "subtype1" "subtype4" "subtype2" "subtype4"
[289] "subtype4" "subtype1" "subtype1" "subtype5" "subtype2" "subtype4"
[295] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[301] "subtype2" "subtype1" "subtype4" "subtype2" "subtype3" "subtype1"
[307] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype2"
[313] "subtype4" "subtype4" "subtype2" "subtype5" "subtype4" "subtype4"
[319] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[331] "subtype1" "subtype1" "subtype4" "subtype4" "subtype1" "subtype2"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[343] "subtype4" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[349] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype2"
[355] "subtype4" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype4"
[367] "subtype1" "subtype2" "subtype5" "subtype3" "subtype1" "subtype4"
[373] "subtype2" "subtype3" "subtype4" "subtype4" "subtype1" "subtype1"
[379] "subtype4" "subtype1" "subtype4" "subtype4" "subtype2" "subtype3"
[385] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[391] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[397] "subtype1" "subtype2" "subtype2" "subtype5" "subtype4" "subtype1"
[403] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype5"
[409] "subtype4" "subtype1" "subtype2" "subtype5" "subtype2" "subtype4"
[415] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype2"
[421] "subtype3" "subtype4" "subtype1" "subtype4" "subtype3" "subtype2"
[427] "subtype3" "subtype4" "subtype4" "subtype1" "subtype4" "subtype1"
[433] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[439] "subtype3" "subtype4" "subtype1" "subtype4" "subtype3" "subtype1"
[445] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[451] "subtype1" "subtype5" "subtype1" "subtype3" "subtype2" "subtype5"
[457] "subtype1" "subtype1" "subtype1" "subtype2" "subtype4" "subtype1"
[463] "subtype2" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[469] "subtype1" "subtype2" "subtype4" "subtype3" "subtype5" "subtype1"
[475] "subtype1" "subtype1" "subtype2" "subtype4" "subtype1" "subtype5"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[493] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype2"
[499] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[505] "subtype4" "subtype2" "subtype2" "subtype4" "subtype2" "subtype4"
[511] "subtype2" "subtype5" "subtype1" "subtype1" "subtype1" "subtype3"
[517] "subtype2" "subtype1" "subtype4" "subtype1" "subtype2" "subtype5"
[523] "subtype4" "subtype2" "subtype1" "subtype5" "subtype5" "subtype1"
[529] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype4"
[535] "subtype1" "subtype1" "subtype2" "subtype3" "subtype4" "subtype5"
[541] "subtype4" "subtype4" "subtype1" "subtype3" "subtype2" "subtype4"
[547] "subtype1" "subtype4" "subtype2" "subtype2" "subtype4" "subtype4"
[553] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype2"
[559] "subtype3" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[565] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype1"
[571] "subtype1" "subtype4" "subtype1" "subtype2" "subtype3" "subtype2"
[577] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype2"
[583] "subtype1" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[589] "subtype1" "subtype2" "subtype1" "subtype4" "subtype5" "subtype1"
[595] "subtype1" "subtype2" "subtype4" "subtype1" "subtype1" "subtype5"
[601] "subtype2" "subtype1" "subtype4" "subtype4" "subtype4" "subtype1"
[607] "subtype1" "subtype4" "subtype3" "subtype2" "subtype5" "subtype4"
[613] "subtype1" "subtype4" "subtype2" "subtype4" "subtype2" "subtype5"
[619] "subtype5" "subtype5" "subtype1" "subtype4" "subtype2" "subtype4"
[625] "subtype1" "subtype1" "subtype1" "subtype4" "subtype2" "subtype1"
[631] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[637] "subtype1" "subtype2" "subtype1" "subtype3" "subtype5" "subtype2"
[643] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype4"
[649] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype4"
[655] "subtype1" "subtype4" "subtype4" "subtype2" "subtype3" "subtype3"
[661] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype1"
[667] "subtype1" "subtype2" "subtype5" "subtype3" "subtype2" "subtype1"
[673] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[679] "subtype5" "subtype2" "subtype2" "subtype4" "subtype5" "subtype1"
[685] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[691] "subtype1" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[697] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype4"
[703] "subtype3" "subtype1" "subtype2" "subtype1" "subtype4" "subtype5"
[709] "subtype4" "subtype4" "subtype5" "subtype4" "subtype5" "subtype3"
[715] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[721] "subtype2" "subtype1" "subtype5" "subtype3" "subtype1" "subtype2"
[727] "subtype2" "subtype2" "subtype4" "subtype1" "subtype4" "subtype1"
[733] "subtype1" "subtype4" "subtype1" "subtype2" "subtype1" "subtype3"
[739] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[745] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[751] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype2"
[757] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype2"
[763] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype3"
[769] "subtype2" "subtype1" "subtype4" "subtype1" "subtype4" "subtype1"
[775] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype1"
[781] "subtype4" "subtype3" "subtype1" "subtype1" "subtype5" "subtype1"
[787] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[793] "subtype1" "subtype1" "subtype2" "subtype1" "subtype4" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
 [13] "subtype4" "subtype2" "subtype1" "subtype4" "subtype1" "subtype2"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype2"
 [31] "subtype5" "subtype3" "subtype4" "subtype3" "subtype4" "subtype1"
 [37] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [43] "subtype4" "subtype2" "subtype1" "subtype2" "subtype5" "subtype2"
 [49] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype4"
 [55] "subtype4" "subtype4" "subtype1" "subtype4" "subtype1" "subtype4"
 [61] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [67] "subtype1" "subtype4" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype4" "subtype1" "subtype1" "subtype4" "subtype2" "subtype5"
 [79] "subtype2" "subtype2" "subtype1" "subtype5" "subtype4" "subtype1"
 [85] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype5"
 [91] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype4"
 [97] "subtype1" "subtype1" "subtype2" "subtype1" "subtype4" "subtype3"
[103] "subtype4" "subtype4" "subtype5" "subtype1" "subtype1" "subtype1"
[109] "subtype4" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[115] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[121] "subtype2" "subtype4" "subtype2" "subtype2" "subtype4" "subtype3"
[127] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype1"
[133] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype4"
[139] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype3"
[145] "subtype5" "subtype3" "subtype2" "subtype2" "subtype1" "subtype4"
[151] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype4"
[157] "subtype2" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[163] "subtype1" "subtype5" "subtype3" "subtype3" "subtype1" "subtype2"
[169] "subtype3" "subtype4" "subtype3" "subtype2" "subtype4" "subtype3"
[175] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype2"
[181] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[187] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[193] "subtype4" "subtype1" "subtype1" "subtype2" "subtype1" "subtype4"
[199] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[205] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[217] "subtype2" "subtype2" "subtype4" "subtype4" "subtype4" "subtype4"
[223] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[229] "subtype1" "subtype4" "subtype3" "subtype4" "subtype1" "subtype1"
[235] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[241] "subtype2" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[247] "subtype4" "subtype4" "subtype1" "subtype2" "subtype2" "subtype4"
[253] "subtype3" "subtype2" "subtype2" "subtype5" "subtype2" "subtype1"
[259] "subtype4" "subtype2" "subtype2" "subtype4" "subtype1" "subtype4"
[265] "subtype3" "subtype1" "subtype3" "subtype1" "subtype4" "subtype1"
[271] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[277] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype1"
[283] "subtype4" "subtype1" "subtype1" "subtype4" "subtype2" "subtype4"
[289] "subtype4" "subtype1" "subtype1" "subtype5" "subtype2" "subtype4"
[295] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[301] "subtype2" "subtype1" "subtype4" "subtype2" "subtype3" "subtype1"
[307] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype2"
[313] "subtype4" "subtype4" "subtype2" "subtype5" "subtype4" "subtype4"
[319] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[331] "subtype1" "subtype1" "subtype4" "subtype4" "subtype1" "subtype2"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[343] "subtype4" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[349] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype2"
[355] "subtype4" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype4"
[367] "subtype1" "subtype2" "subtype5" "subtype3" "subtype1" "subtype4"
[373] "subtype2" "subtype3" "subtype4" "subtype4" "subtype1" "subtype1"
[379] "subtype4" "subtype1" "subtype4" "subtype4" "subtype2" "subtype3"
[385] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[391] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[397] "subtype1" "subtype2" "subtype2" "subtype5" "subtype4" "subtype1"
[403] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype5"
[409] "subtype4" "subtype1" "subtype2" "subtype5" "subtype2" "subtype4"
[415] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype2"
[421] "subtype3" "subtype4" "subtype1" "subtype4" "subtype3" "subtype2"
[427] "subtype3" "subtype4" "subtype4" "subtype1" "subtype4" "subtype1"
[433] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype5"
[439] "subtype3" "subtype4" "subtype1" "subtype4" "subtype3" "subtype1"
[445] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[451] "subtype1" "subtype5" "subtype1" "subtype3" "subtype2" "subtype5"
[457] "subtype1" "subtype1" "subtype1" "subtype2" "subtype4" "subtype1"
[463] "subtype2" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[469] "subtype1" "subtype2" "subtype4" "subtype3" "subtype5" "subtype1"
[475] "subtype1" "subtype1" "subtype2" "subtype4" "subtype1" "subtype5"
[481] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[487] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[493] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype2"
[499] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[505] "subtype4" "subtype2" "subtype2" "subtype4" "subtype2" "subtype4"
[511] "subtype2" "subtype5" "subtype1" "subtype1" "subtype1" "subtype3"
[517] "subtype2" "subtype1" "subtype4" "subtype1" "subtype2" "subtype5"
[523] "subtype4" "subtype2" "subtype1" "subtype5" "subtype5" "subtype1"
[529] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype4"
[535] "subtype1" "subtype1" "subtype2" "subtype3" "subtype4" "subtype5"
[541] "subtype4" "subtype4" "subtype1" "subtype3" "subtype2" "subtype4"
[547] "subtype1" "subtype4" "subtype2" "subtype2" "subtype4" "subtype4"
[553] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype2"
[559] "subtype3" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[565] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype1"
[571] "subtype1" "subtype4" "subtype1" "subtype2" "subtype3" "subtype2"
[577] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype2"
[583] "subtype1" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[589] "subtype1" "subtype2" "subtype1" "subtype4" "subtype5" "subtype1"
[595] "subtype1" "subtype2" "subtype4" "subtype1" "subtype1" "subtype5"
[601] "subtype2" "subtype1" "subtype4" "subtype4" "subtype4" "subtype1"
[607] "subtype1" "subtype4" "subtype3" "subtype2" "subtype5" "subtype4"
[613] "subtype1" "subtype4" "subtype2" "subtype4" "subtype2" "subtype5"
[619] "subtype5" "subtype5" "subtype1" "subtype4" "subtype2" "subtype4"
[625] "subtype1" "subtype1" "subtype1" "subtype4" "subtype2" "subtype1"
[631] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[637] "subtype1" "subtype2" "subtype1" "subtype3" "subtype5" "subtype2"
[643] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype4"
[649] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype4"
[655] "subtype1" "subtype4" "subtype4" "subtype2" "subtype3" "subtype3"
[661] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype1"
[667] "subtype1" "subtype2" "subtype5" "subtype3" "subtype2" "subtype1"
[673] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[679] "subtype5" "subtype2" "subtype2" "subtype4" "subtype5" "subtype1"
[685] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[691] "subtype1" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[697] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype4"
[703] "subtype3" "subtype1" "subtype2" "subtype1" "subtype4" "subtype5"
[709] "subtype4" "subtype4" "subtype5" "subtype4" "subtype5" "subtype3"
[715] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[721] "subtype2" "subtype1" "subtype5" "subtype3" "subtype1" "subtype2"
[727] "subtype2" "subtype2" "subtype4" "subtype1" "subtype4" "subtype1"
[733] "subtype1" "subtype4" "subtype1" "subtype2" "subtype1" "subtype3"
[739] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[745] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[751] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype2"
[757] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype2"
[763] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype3"
[769] "subtype2" "subtype1" "subtype4" "subtype1" "subtype4" "subtype1"
[775] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype1"
[781] "subtype4" "subtype3" "subtype1" "subtype1" "subtype5" "subtype1"
[787] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[793] "subtype1" "subtype1" "subtype2" "subtype1" "subtype4" "subtype1"
D3V2, continuous
D3V3, binary
          cls
clus         0   1
  subtype1 312   0
  subtype2 210   8
  subtype3  66   1
  subtype4 213   0
  subtype5  47   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  312    0
  subtype2  210    8
  subtype3   66    1
  subtype4  213    0
  subtype5   47    0
D3V4, binary
          cls
clus         0   1
  subtype1  68 244
  subtype2  52 166
  subtype3  19  48
  subtype4  59 154
  subtype5  14  33
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   68  244
  subtype2   52  166
  subtype3   19   48
  subtype4   59  154
  subtype5   14   33
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 272   4  35
  subtype2        1 195   5  17
  subtype3        0  63   2   2
  subtype4        0 190   4  19
  subtype5        0  41   0   6
D3V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 91      11      57         1 35  44  11   2    8 15  14  7   9   1
  subtype2 52       3      25         0 31  33   7   0   10 18  18  7   9   0
  subtype3 20       1      10         0  5  16   3   0    0  1   4  3   3   0
  subtype4 78       5      32         0 25  23   7   0    3 16  13  1   7   1
  subtype5 10       2       5         0  6  10   4   0    1  1   4  1   2   0
          vv
clus       N3C NX
  subtype1   0  6
  subtype2   0  5
  subtype3   0  1
  subtype4   1  1
  subtype5   0  1
D3V6, multiclass
D3V7, continuous
D3V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      37       34        2        5        96        66         1
  subtype2      12       10        3        1        74        47         1
  subtype3       5        2        0        1        23        18         0
  subtype4      15       15        1        1        79        50         0
  subtype5       3        3        0        0        19        10         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         39          7         14        4         0       7
  subtype2         40         11         12        5         0       2
  subtype3          7          4          3        2         0       2
  subtype4         30          3          9        4         1       4
  subtype5          8          0          3        0         0       1
D3V9, multiclass

Clustering(4) Variable = METHLYATION_CNMF
D4V1, survival
          sevent
clus2        0   1
  subtype1  72  13
  subtype2 111  10
  subtype3  71  14
  subtype4 117  13
  subtype5  31   3
  subtype6  67   8
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      85      121       85      130       34       75 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      13       10       14       13        3        8 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A0SX TCGA-A2-A0T0 
        8.52        31.79        28.01        19.17        42.35        11.08 
TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A7-A13D 
        7.96         8.28        10.72        21.73        12.20         8.78 
TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I TCGA-AC-A2BK TCGA-AC-A2QH 
        9.44         8.45         6.87         4.01        38.53         1.02 
TCGA-AC-A2QJ TCGA-AN-A0XU TCGA-AO-A0JB TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 
        2.27         0.33        37.81        43.36       102.54        96.10 
TCGA-AO-A1KO TCGA-AO-A1KR TCGA-AR-A0TP TCGA-AR-A0TU TCGA-AR-A0U0 TCGA-AR-A0U4 
       14.73        70.36        78.64        11.84         0.26        53.49 
TCGA-AR-A1AI TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24Q TCGA-AR-A251 
       61.84        43.04        17.19        20.19        66.02        45.14 
TCGA-AR-A256 TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RU 
       93.83        20.38        77.62       211.53       100.67       131.21 
TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-B6-A1KF TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0E0 
       21.47       186.44       101.52        39.55        51.68         4.37 
TCGA-BH-A0H9 TCGA-BH-A0WA TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN TCGA-BH-A208 
       41.00        12.23        97.48       114.12        72.07        57.83 
TCGA-C8-A1HJ TCGA-C8-A26Y TCGA-C8-A27B TCGA-D8-A1JF TCGA-D8-A1JK TCGA-D8-A1JL 
        0.16         0.43         0.99         3.16         3.58         8.71 
TCGA-D8-A1JM TCGA-D8-A1XK TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A27F 
        7.82        10.72         5.82         6.35         3.85         7.46 
TCGA-D8-A27H TCGA-E2-A14N TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1LG TCGA-E2-A1LH 
        4.60        44.38        64.57        41.79        11.51        94.52 
TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RH TCGA-E9-A244 
       90.41         8.75        33.34         7.86         0.46         0.66 
TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH TCGA-GI-A2C9 
       15.22        16.47         7.86        19.99         4.57        23.11 
TCGA-GM-A2DB 
       53.10 

$subtype2
TCGA-A1-A0SE TCGA-A1-A0SH TCGA-A1-A0SI TCGA-A2-A0T5 TCGA-A2-A0YC TCGA-A2-A0YD 
       43.40        47.24        20.84        10.55        21.14        18.08 
TCGA-A2-A0YF TCGA-A2-A0YL TCGA-A2-A1G0 TCGA-A2-A25A TCGA-A2-A25C TCGA-A2-A3KD 
        9.50         8.81        12.49        97.58         9.37        26.40 
TCGA-A7-A26E TCGA-A7-A3IZ TCGA-A7-A3J0 TCGA-A7-A3J1 TCGA-A7-A3RF TCGA-A8-A0AD 
       13.84         4.87         2.50         2.47         1.78        38.04 
TCGA-AC-A23E TCGA-AC-A2FG TCGA-AC-A2QI TCGA-AC-A3HN TCGA-AC-A3TN TCGA-AN-A0XP 
        2.37        36.99         0.92         0.69         1.12         0.30 
TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AO-A03N TCGA-AO-A0JF TCGA-AO-A0JJ TCGA-AO-A125 
        0.33         0.33        54.08        11.64        49.71        99.22 
TCGA-AO-A126 TCGA-AO-A12B TCGA-AQ-A1H3 TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AL 
       93.70        77.56         5.33         5.26        51.22        48.82 
TCGA-AR-A1AN TCGA-AR-A1AS TCGA-AR-A24M TCGA-AR-A24P TCGA-AR-A24X TCGA-AR-A2LE 
       43.69        40.83        65.42         0.85        48.16       128.65 
TCGA-AR-A2LM TCGA-AR-A2LN TCGA-B6-A0RI TCGA-B6-A0RM TCGA-B6-A0RP TCGA-B6-A0WZ 
       40.01        17.06       223.40        78.02       102.77       129.57 
TCGA-B6-A0X4 TCGA-B6-A0X7 TCGA-B6-A1KI TCGA-B6-A2IU TCGA-BH-A0AZ TCGA-BH-A0B5 
       28.24        58.88        48.10       159.12        28.50        48.36 
TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BS TCGA-BH-A0DP 
       37.22        32.02        21.70        36.72        53.92        15.65 
TCGA-BH-A0E1 TCGA-BH-A0H6 TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HN TCGA-BH-A0HP 
       15.68        24.56        23.90        20.35        16.96        13.61 
TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A1ET TCGA-BH-A1FG TCGA-BH-A1FJ TCGA-BH-A1FL 
        5.92         5.75        82.85       122.89        63.35        55.00 
TCGA-BH-A1FR TCGA-BH-A28Q TCGA-D8-A1JE TCGA-D8-A1JS TCGA-D8-A1JU TCGA-D8-A1X7 
      144.59         6.44         1.87         3.45         3.48         2.79 
TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS 
        8.94         6.61         2.66         7.96         5.52         1.64 
TCGA-D8-A1XV TCGA-D8-A27K TCGA-D8-A27P TCGA-D8-A27T TCGA-D8-A27V TCGA-E2-A107 
        4.80         3.88         0.76         4.44         2.40        25.08 
TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A1B4 
       24.59        13.74        11.84        13.51        15.22        29.95 
TCGA-E2-A1BC TCGA-E2-A1IF TCGA-E2-A1IL TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L8 
        9.76        31.43         0.46         4.18        43.13        33.37 
TCGA-E2-A1L9 TCGA-E9-A1R3 TCGA-E9-A1RB TCGA-E9-A1RD TCGA-E9-A1RI TCGA-E9-A226 
       12.76         2.10         0.69         0.66         1.58         0.53 
TCGA-E9-A227 TCGA-E9-A245 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A3HO TCGA-EW-A1IX 
        0.79         0.82         0.92         0.33         0.62        35.57 
TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1P0 TCGA-EW-A1P3 TCGA-EW-A1P5 TCGA-EW-A1PE 
        4.57         8.28        36.85        32.45        12.00         3.48 
TCGA-LL-A442 
        3.58 

$subtype3
TCGA-A1-A0SF TCGA-A1-A0SN TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0SY TCGA-A2-A0T4 
       48.10        39.32        27.12        44.84        37.94        12.99 
TCGA-A2-A0T6 TCGA-A2-A25D TCGA-A2-A3KC TCGA-A7-A13F TCGA-A7-A26H TCGA-A8-A0A6 
       11.31         7.99        11.93         6.44         2.10        21.04 
TCGA-AC-A23C TCGA-AC-A2B8 TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XV TCGA-AO-A0JE 
        0.95         1.45         0.33        12.33         5.33        64.60 
TCGA-AO-A0JM TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A1KT TCGA-AQ-A04L TCGA-AQ-A0Y5 
       60.03        57.27        41.59        17.79       109.94         5.62 
TCGA-AQ-A1H2 TCGA-AR-A0TV TCGA-AR-A1AP TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A24K 
        7.56        29.72        39.95        41.82        42.58        50.89 
TCGA-AR-A24N TCGA-AR-A24R TCGA-AR-A255 TCGA-AR-A2LK TCGA-AR-A2LL TCGA-B6-A0RL 
       68.19        57.37        34.78        42.84         7.33        81.17 
TCGA-B6-A0RN TCGA-B6-A0WW TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DS 
      172.96        17.95        45.80        38.01        13.91         2.53 
TCGA-BH-A0HK TCGA-BH-A0HY TCGA-BH-A1EN TCGA-BH-A1EV TCGA-BH-A1EX TCGA-BH-A1EY 
        5.85        28.50        67.46        12.00        49.58        17.69 
TCGA-BH-A1FD TCGA-BH-A202 TCGA-BH-A203 TCGA-C8-A26V TCGA-C8-A26X TCGA-C8-A274 
       33.14         0.72        38.60         0.30         0.36         0.03 
TCGA-C8-A275 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JG TCGA-D8-A1JJ 
        0.03         8.42         8.15         0.59         6.15         9.01 
TCGA-D8-A1JN TCGA-D8-A1XJ TCGA-D8-A1XU TCGA-D8-A1Y1 TCGA-D8-A1Y3 TCGA-D8-A27G 
        7.13        11.57         4.90         3.78         4.08         6.87 
TCGA-D8-A27N TCGA-E2-A1BD TCGA-E2-A1L7 TCGA-E2-A1LE TCGA-E2-A2P5 TCGA-E2-A2P6 
        4.77        10.42        20.81        28.90        10.72         5.49 
TCGA-E9-A1R5 TCGA-E9-A1RC TCGA-E9-A247 TCGA-E9-A2JS TCGA-EW-A1IW TCGA-EW-A1J5 
        1.38        40.37         0.39         0.43         8.28         7.46 
TCGA-EW-A1OZ TCGA-EW-A1PC TCGA-EW-A3E8 TCGA-GM-A2D9 TCGA-GM-A2DL TCGA-GM-A3NW 
       30.94         6.12        21.27        59.57        90.81        98.04 
TCGA-GM-A3NY 
       24.43 

$subtype4
TCGA-A1-A0SG TCGA-A1-A0SJ TCGA-A1-A0SQ TCGA-A2-A04R TCGA-A2-A0CT TCGA-A2-A0EU 
       14.24        14.01        18.18        77.72        63.02        24.10 
TCGA-A2-A0T7 TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW 
       13.05        13.28        12.46        23.77        15.12         7.27 
TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25E TCGA-A7-A0D9 TCGA-A7-A26J 
       30.74        12.23         8.48        82.55         5.23         2.20 
TCGA-A7-A2KD TCGA-A8-A075 TCGA-A8-A08O TCGA-AC-A23H TCGA-AC-A2BM TCGA-AC-A2FM 
        5.95        17.00        30.97         2.66        38.20        26.04 
TCGA-AN-A0XL TCGA-AN-A0XT TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A0JA TCGA-AO-A0JD 
        0.33         0.33        80.28        47.84        11.38        59.61 
TCGA-AO-A0JG TCGA-AO-A0JI TCGA-AO-A12C TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS 
       14.76        38.53        65.52        82.62        49.94         0.53 
TCGA-AQ-A04H TCGA-AR-A0TQ TCGA-AR-A0TW TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 
       14.43        49.32        24.30        43.17        83.87        74.40 
TCGA-AR-A24H TCGA-AR-A24L TCGA-AR-A24S TCGA-AR-A24V TCGA-AR-A24Z TCGA-AR-A250 
      109.58        73.02        62.07        54.18        51.75        56.12 
TCGA-B6-A0RG TCGA-B6-A0RO TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WY TCGA-B6-A0X5 
       68.45       162.02       177.40        79.63       113.75        68.94 
TCGA-B6-A1KC TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0AW TCGA-BH-A0B8 TCGA-BH-A0BT 
       43.59       109.48        24.53        20.45        51.58        45.57 
TCGA-BH-A0BZ TCGA-BH-A0DQ TCGA-BH-A0E2 TCGA-BH-A0GY TCGA-BH-A0H0 TCGA-BH-A0H7 
       49.05         3.22        12.36        30.15        15.16        23.05 
TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HX TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1F2 
       28.14        26.50        27.25        91.99       113.82        31.53 
TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FM TCGA-BH-A204 TCGA-C8-A1HK TCGA-C8-A1HL 
       89.16        24.62        45.63        83.31         0.23         0.07 
TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A26W TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A 
        0.20         0.07         0.23         0.13         0.20        12.20 
TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JI TCGA-D8-A1JT TCGA-D8-A1X5 TCGA-D8-A1X6 
        5.85         8.98         0.69         4.04         5.62         7.76 
TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XY TCGA-D8-A1XZ 
       12.49         9.01         5.10         6.48         2.66         3.95 
TCGA-D8-A1Y0 TCGA-D8-A27R TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 
        5.46         2.96         0.49        38.24        51.12        38.53 
TCGA-E2-A10C TCGA-E2-A15K TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1IN 
       28.04         1.12        32.32        24.82        21.63        12.89 
TCGA-E2-A1IO TCGA-E2-A1LA TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RE TCGA-E9-A1RF 
       14.73        15.22         2.76         1.12         1.55         1.25 
TCGA-E9-A1RG TCGA-E9-A295 TCGA-EW-A1J1 TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OY 
        1.15         0.69         9.27        19.56        18.48        19.50 
TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PF TCGA-EW-A2FS TCGA-EW-A2FV TCGA-EW-A2FW 
       10.26         8.78         4.57        38.56         7.82         6.25 
TCGA-GI-A2C8 TCGA-GM-A2DA TCGA-GM-A2DC TCGA-GM-A2DK 
        6.97       194.27        53.52        62.33 

$subtype5
TCGA-A1-A0SM TCGA-A2-A0SU TCGA-A2-A1FZ TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A7-A13G 
        7.96        44.42        13.45         4.34        42.25         6.84 
TCGA-AC-A2FK TCGA-AR-A1AU TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A254 TCGA-B6-A0IK 
       38.79        46.32        53.26        50.96        39.85        18.77 
TCGA-B6-A0RV TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0GZ TCGA-BH-A0H3 TCGA-BH-A1EW 
      157.41        23.44        22.13        10.78        37.78        55.69 
TCGA-BH-A1FH TCGA-BH-A201 TCGA-BH-A28O TCGA-C8-A1HI TCGA-D8-A1JH TCGA-D8-A1JP 
       36.92         6.87        10.62         0.07         9.34         5.49 
TCGA-D8-A1XG TCGA-D8-A1XL TCGA-D8-A1XM TCGA-D8-A27E TCGA-E2-A14U TCGA-E2-A1LB 
        6.44        10.49         7.17         5.98        27.55        31.96 
TCGA-E9-A1R2 TCGA-EW-A1PD TCGA-EW-A2FR TCGA-GM-A2DM 
        0.62         5.72        36.82        76.64 

$subtype6
TCGA-A2-A0EN TCGA-A2-A0ST TCGA-A2-A0T1 TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A25F 
       82.68        54.02        10.59        11.77        10.98         3.72 
TCGA-A7-A3IY TCGA-AC-A23G TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FO TCGA-AC-A3BB 
        4.96        10.82         1.45        55.40        50.70         0.99 
TCGA-AC-A3OD TCGA-AN-A0XW TCGA-AO-A03U TCGA-AO-A0JC TCGA-AO-A128 TCGA-AR-A0TT 
        1.15         5.59        59.05        50.86        94.59        55.20 
TCGA-AR-A0TX TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AW TCGA-AR-A1AX TCGA-AR-A24O 
        0.49        52.73        43.53        35.24        36.26        65.65 
TCGA-AR-A24U TCGA-AR-A252 TCGA-AR-A2LH TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-B6-A0RT 
       53.36        40.64        20.22        20.81        16.96        89.46 
TCGA-BH-A0B6 TCGA-BH-A0BF TCGA-BH-A0C0 TCGA-BH-A0C3 TCGA-BH-A0DV TCGA-BH-A0RX 
       56.94        25.68        41.75        48.13        45.17         5.59 
TCGA-BH-A0W5 TCGA-BH-A1EU TCGA-BH-A1F0 TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FU 
       17.85        42.28        25.81       120.62        74.73        72.07 
TCGA-BH-A209 TCGA-C8-A278 TCGA-D8-A1Y2 TCGA-D8-A27I TCGA-D8-A27L TCGA-D8-A27M 
      130.16         0.03         2.37         6.08         4.11         4.73 
TCGA-E2-A108 TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1IJ 
        4.08        44.75        25.45        11.11        27.95        23.84 
TCGA-E2-A1IK TCGA-E2-A3DX TCGA-E9-A1R4 TCGA-E9-A1RA TCGA-E9-A243 TCGA-E9-A248 
       17.03         7.13         0.95         0.95         1.41         0.69 
TCGA-E9-A2JT TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1OV TCGA-EW-A1P1 TCGA-EW-A1P7 
        0.76         8.48         8.55        17.16        30.21        20.88 
TCGA-EW-A1PG TCGA-EW-A3U0 TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A2DI 
       28.77         7.53        43.04        42.71        42.28        61.91 
TCGA-GM-A2DN TCGA-GM-A2DO TCGA-LL-A441 
       77.33        53.33         2.99 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    0.16     0.30     0.03     0.07     0.07     0.03 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  211.53   223.40   172.96   194.27   157.41   130.16 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
   19.17    13.74    12.99    18.99    20.45    25.45 
[1] "0.2 - 211.5 (19.2)" "0.3 - 223.4 (13.7)" "0.0 - 173.0 (13.0)"
[4] "0.1 - 194.3 (19.0)" "0.1 - 157.4 (20.4)" "0.0 - 130.2 (25.4)"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype4" "subtype6" "subtype4" "subtype6"
 [19] "subtype5" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [25] "subtype6" "subtype1" "subtype3" "subtype2" "subtype3" "subtype4"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype4"
 [37] "subtype6" "subtype1" "subtype6" "subtype2" "subtype1" "subtype4"
 [43] "subtype4" "subtype4" "subtype4" "subtype5" "subtype2" "subtype1"
 [49] "subtype4" "subtype5" "subtype5" "subtype2" "subtype4" "subtype2"
 [55] "subtype3" "subtype4" "subtype6" "subtype3" "subtype2" "subtype4"
 [61] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype1"
 [67] "subtype1" "subtype3" "subtype1" "subtype4" "subtype4" "subtype6"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
 [79] "subtype3" "subtype2" "subtype3" "subtype2" "subtype6" "subtype4"
 [85] "subtype3" "subtype1" "subtype4" "subtype6" "subtype6" "subtype2"
 [91] "subtype5" "subtype4" "subtype6" "subtype1" "subtype2" "subtype1"
 [97] "subtype6" "subtype2" "subtype6" "subtype2" "subtype4" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype4" "subtype1"
[109] "subtype3" "subtype6" "subtype4" "subtype4" "subtype2" "subtype6"
[115] "subtype4" "subtype1" "subtype6" "subtype4" "subtype3" "subtype2"
[121] "subtype4" "subtype4" "subtype2" "subtype1" "subtype3" "subtype1"
[127] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype4"
[133] "subtype3" "subtype3" "subtype1" "subtype4" "subtype4" "subtype1"
[139] "subtype4" "subtype3" "subtype4" "subtype3" "subtype3" "subtype3"
[145] "subtype2" "subtype1" "subtype4" "subtype2" "subtype6" "subtype1"
[151] "subtype3" "subtype4" "subtype6" "subtype4" "subtype1" "subtype4"
[157] "subtype4" "subtype1" "subtype1" "subtype6" "subtype2" "subtype2"
[163] "subtype2" "subtype6" "subtype3" "subtype1" "subtype1" "subtype2"
[169] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[175] "subtype4" "subtype3" "subtype4" "subtype2" "subtype3" "subtype6"
[181] "subtype2" "subtype1" "subtype3" "subtype4" "subtype5" "subtype6"
[187] "subtype4" "subtype5" "subtype2" "subtype4" "subtype4" "subtype1"
[193] "subtype6" "subtype5" "subtype3" "subtype1" "subtype2" "subtype6"
[199] "subtype3" "subtype3" "subtype2" "subtype2" "subtype6" "subtype6"
[205] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype2"
[211] "subtype3" "subtype2" "subtype3" "subtype4" "subtype2" "subtype1"
[217] "subtype6" "subtype1" "subtype5" "subtype4" "subtype4" "subtype3"
[223] "subtype1" "subtype4" "subtype2" "subtype1" "subtype2" "subtype4"
[229] "subtype2" "subtype4" "subtype1" "subtype2" "subtype4" "subtype2"
[235] "subtype4" "subtype4" "subtype2" "subtype1" "subtype2" "subtype6"
[241] "subtype4" "subtype1" "subtype2" "subtype2" "subtype6" "subtype2"
[247] "subtype2" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[253] "subtype3" "subtype5" "subtype3" "subtype5" "subtype3" "subtype2"
[259] "subtype4" "subtype3" "subtype6" "subtype1" "subtype2" "subtype4"
[265] "subtype4" "subtype5" "subtype4" "subtype5" "subtype2" "subtype4"
[271] "subtype1" "subtype4" "subtype4" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype2" "subtype4" "subtype3" "subtype6" "subtype2"
[283] "subtype2" "subtype6" "subtype1" "subtype3" "subtype4" "subtype4"
[289] "subtype2" "subtype6" "subtype3" "subtype5" "subtype3" "subtype3"
[295] "subtype6" "subtype4" "subtype4" "subtype1" "subtype4" "subtype6"
[301] "subtype1" "subtype3" "subtype6" "subtype2" "subtype5" "subtype2"
[307] "subtype2" "subtype4" "subtype1" "subtype2" "subtype6" "subtype5"
[313] "subtype3" "subtype3" "subtype4" "subtype1" "subtype6" "subtype5"
[319] "subtype2" "subtype5" "subtype1" "subtype4" "subtype4" "subtype4"
[325] "subtype4" "subtype3" "subtype4" "subtype3" "subtype1" "subtype4"
[331] "subtype4" "subtype3" "subtype3" "subtype6" "subtype4" "subtype1"
[337] "subtype3" "subtype3" "subtype3" "subtype4" "subtype4" "subtype2"
[343] "subtype1" "subtype3" "subtype5" "subtype4" "subtype3" "subtype1"
[349] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype4"
[355] "subtype2" "subtype4" "subtype4" "subtype2" "subtype2" "subtype4"
[361] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype5"
[367] "subtype3" "subtype1" "subtype5" "subtype5" "subtype2" "subtype1"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[379] "subtype4" "subtype4" "subtype4" "subtype3" "subtype6" "subtype3"
[385] "subtype5" "subtype1" "subtype3" "subtype1" "subtype6" "subtype2"
[391] "subtype6" "subtype6" "subtype3" "subtype2" "subtype4" "subtype2"
[397] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype6"
[403] "subtype4" "subtype2" "subtype4" "subtype2" "subtype2" "subtype1"
[409] "subtype5" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[415] "subtype6" "subtype2" "subtype6" "subtype6" "subtype2" "subtype3"
[421] "subtype4" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[427] "subtype6" "subtype2" "subtype4" "subtype4" "subtype2" "subtype2"
[433] "subtype3" "subtype2" "subtype2" "subtype4" "subtype5" "subtype3"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[445] "subtype3" "subtype3" "subtype6" "subtype5" "subtype2" "subtype6"
[451] "subtype3" "subtype4" "subtype4" "subtype6" "subtype2" "subtype3"
[457] "subtype2" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype3"
[469] "subtype6" "subtype2" "subtype2" "subtype4" "subtype3" "subtype6"
[475] "subtype2" "subtype3" "subtype2" "subtype6" "subtype6" "subtype4"
[481] "subtype2" "subtype2" "subtype3" "subtype4" "subtype6" "subtype1"
[487] "subtype4" "subtype4" "subtype3" "subtype2" "subtype6" "subtype2"
[493] "subtype1" "subtype2" "subtype4" "subtype6" "subtype1" "subtype4"
[499] "subtype1" "subtype3" "subtype5" "subtype2" "subtype4" "subtype6"
[505] "subtype1" "subtype5" "subtype4" "subtype4" "subtype4" "subtype3"
[511] "subtype6" "subtype4" "subtype1" "subtype3" "subtype4" "subtype1"
[517] "subtype4" "subtype6" "subtype6" "subtype6" "subtype6" "subtype4"
[523] "subtype3" "subtype5" "subtype6" "subtype6" "subtype3" "subtype3"
[529] "subtype6" "subtype2"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype4" "subtype6" "subtype4" "subtype6"
 [19] "subtype5" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [25] "subtype6" "subtype1" "subtype3" "subtype2" "subtype3" "subtype4"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype4"
 [37] "subtype6" "subtype1" "subtype6" "subtype2" "subtype1" "subtype4"
 [43] "subtype4" "subtype4" "subtype4" "subtype5" "subtype2" "subtype1"
 [49] "subtype4" "subtype5" "subtype5" "subtype2" "subtype4" "subtype2"
 [55] "subtype3" "subtype4" "subtype6" "subtype3" "subtype2" "subtype4"
 [61] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype1"
 [67] "subtype1" "subtype3" "subtype1" "subtype4" "subtype4" "subtype6"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
 [79] "subtype3" "subtype2" "subtype3" "subtype2" "subtype6" "subtype4"
 [85] "subtype3" "subtype1" "subtype4" "subtype6" "subtype6" "subtype2"
 [91] "subtype5" "subtype4" "subtype6" "subtype1" "subtype2" "subtype1"
 [97] "subtype6" "subtype2" "subtype6" "subtype2" "subtype4" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype4" "subtype1"
[109] "subtype3" "subtype6" "subtype4" "subtype4" "subtype2" "subtype6"
[115] "subtype4" "subtype1" "subtype6" "subtype4" "subtype3" "subtype2"
[121] "subtype4" "subtype4" "subtype2" "subtype1" "subtype3" "subtype1"
[127] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype4"
[133] "subtype3" "subtype3" "subtype1" "subtype4" "subtype4" "subtype1"
[139] "subtype4" "subtype3" "subtype4" "subtype3" "subtype3" "subtype3"
[145] "subtype2" "subtype1" "subtype4" "subtype2" "subtype6" "subtype1"
[151] "subtype3" "subtype4" "subtype6" "subtype4" "subtype1" "subtype4"
[157] "subtype4" "subtype1" "subtype1" "subtype6" "subtype2" "subtype2"
[163] "subtype2" "subtype6" "subtype3" "subtype1" "subtype1" "subtype2"
[169] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[175] "subtype4" "subtype3" "subtype4" "subtype2" "subtype3" "subtype6"
[181] "subtype2" "subtype1" "subtype3" "subtype4" "subtype5" "subtype6"
[187] "subtype4" "subtype5" "subtype2" "subtype4" "subtype4" "subtype1"
[193] "subtype6" "subtype5" "subtype3" "subtype1" "subtype2" "subtype6"
[199] "subtype3" "subtype3" "subtype2" "subtype2" "subtype6" "subtype6"
[205] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype2"
[211] "subtype3" "subtype2" "subtype3" "subtype4" "subtype2" "subtype1"
[217] "subtype6" "subtype1" "subtype5" "subtype4" "subtype4" "subtype3"
[223] "subtype1" "subtype4" "subtype2" "subtype1" "subtype2" "subtype4"
[229] "subtype2" "subtype4" "subtype1" "subtype2" "subtype4" "subtype2"
[235] "subtype4" "subtype4" "subtype2" "subtype1" "subtype2" "subtype6"
[241] "subtype4" "subtype1" "subtype2" "subtype2" "subtype6" "subtype2"
[247] "subtype2" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[253] "subtype3" "subtype5" "subtype3" "subtype5" "subtype3" "subtype2"
[259] "subtype4" "subtype3" "subtype6" "subtype1" "subtype2" "subtype4"
[265] "subtype4" "subtype5" "subtype4" "subtype5" "subtype2" "subtype4"
[271] "subtype1" "subtype4" "subtype4" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype2" "subtype4" "subtype3" "subtype6" "subtype2"
[283] "subtype2" "subtype6" "subtype1" "subtype3" "subtype4" "subtype4"
[289] "subtype2" "subtype6" "subtype3" "subtype5" "subtype3" "subtype3"
[295] "subtype6" "subtype4" "subtype4" "subtype1" "subtype4" "subtype6"
[301] "subtype1" "subtype3" "subtype6" "subtype2" "subtype5" "subtype2"
[307] "subtype2" "subtype4" "subtype1" "subtype2" "subtype6" "subtype5"
[313] "subtype3" "subtype3" "subtype4" "subtype1" "subtype6" "subtype5"
[319] "subtype2" "subtype5" "subtype1" "subtype4" "subtype4" "subtype4"
[325] "subtype4" "subtype3" "subtype4" "subtype3" "subtype1" "subtype4"
[331] "subtype4" "subtype3" "subtype3" "subtype6" "subtype4" "subtype1"
[337] "subtype3" "subtype3" "subtype3" "subtype4" "subtype4" "subtype2"
[343] "subtype1" "subtype3" "subtype5" "subtype4" "subtype3" "subtype1"
[349] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype4"
[355] "subtype2" "subtype4" "subtype4" "subtype2" "subtype2" "subtype4"
[361] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype5"
[367] "subtype3" "subtype1" "subtype5" "subtype5" "subtype2" "subtype1"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[379] "subtype4" "subtype4" "subtype4" "subtype3" "subtype6" "subtype3"
[385] "subtype5" "subtype1" "subtype3" "subtype1" "subtype6" "subtype2"
[391] "subtype6" "subtype6" "subtype3" "subtype2" "subtype4" "subtype2"
[397] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype6"
[403] "subtype4" "subtype2" "subtype4" "subtype2" "subtype2" "subtype1"
[409] "subtype5" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[415] "subtype6" "subtype2" "subtype6" "subtype6" "subtype2" "subtype3"
[421] "subtype4" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[427] "subtype6" "subtype2" "subtype4" "subtype4" "subtype2" "subtype2"
[433] "subtype3" "subtype2" "subtype2" "subtype4" "subtype5" "subtype3"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[445] "subtype3" "subtype3" "subtype6" "subtype5" "subtype2" "subtype6"
[451] "subtype3" "subtype4" "subtype4" "subtype6" "subtype2" "subtype3"
[457] "subtype2" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype3"
[469] "subtype6" "subtype2" "subtype2" "subtype4" "subtype3" "subtype6"
[475] "subtype2" "subtype3" "subtype2" "subtype6" "subtype6" "subtype4"
[481] "subtype2" "subtype2" "subtype3" "subtype4" "subtype6" "subtype1"
[487] "subtype4" "subtype4" "subtype3" "subtype2" "subtype6" "subtype2"
[493] "subtype1" "subtype2" "subtype4" "subtype6" "subtype1" "subtype4"
[499] "subtype1" "subtype3" "subtype5" "subtype2" "subtype4" "subtype6"
[505] "subtype1" "subtype5" "subtype4" "subtype4" "subtype4" "subtype3"
[511] "subtype6" "subtype4" "subtype1" "subtype3" "subtype4" "subtype1"
[517] "subtype4" "subtype6" "subtype6" "subtype6" "subtype6" "subtype4"
[523] "subtype3" "subtype5" "subtype6" "subtype6" "subtype3" "subtype3"
[529] "subtype6" "subtype2"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype4" "subtype6" "subtype4" "subtype6"
 [19] "subtype5" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [25] "subtype6" "subtype1" "subtype3" "subtype2" "subtype3" "subtype4"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype4"
 [37] "subtype6" "subtype1" "subtype6" "subtype2" "subtype1" "subtype4"
 [43] "subtype4" "subtype4" "subtype4" "subtype5" "subtype2" "subtype1"
 [49] "subtype4" "subtype5" "subtype5" "subtype2" "subtype4" "subtype2"
 [55] "subtype3" "subtype4" "subtype6" "subtype3" "subtype2" "subtype4"
 [61] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype1"
 [67] "subtype1" "subtype3" "subtype1" "subtype4" "subtype4" "subtype6"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype4"
 [79] "subtype3" "subtype2" "subtype3" "subtype2" "subtype6" "subtype4"
 [85] "subtype3" "subtype1" "subtype4" "subtype6" "subtype6" "subtype2"
 [91] "subtype5" "subtype4" "subtype6" "subtype1" "subtype2" "subtype1"
 [97] "subtype6" "subtype2" "subtype6" "subtype2" "subtype4" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype4" "subtype1"
[109] "subtype3" "subtype6" "subtype4" "subtype4" "subtype2" "subtype6"
[115] "subtype4" "subtype1" "subtype6" "subtype4" "subtype3" "subtype2"
[121] "subtype4" "subtype4" "subtype2" "subtype1" "subtype3" "subtype1"
[127] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype4"
[133] "subtype3" "subtype3" "subtype1" "subtype4" "subtype4" "subtype1"
[139] "subtype4" "subtype3" "subtype4" "subtype3" "subtype3" "subtype3"
[145] "subtype2" "subtype1" "subtype4" "subtype2" "subtype6" "subtype1"
[151] "subtype3" "subtype4" "subtype6" "subtype4" "subtype1" "subtype4"
[157] "subtype4" "subtype1" "subtype1" "subtype6" "subtype2" "subtype2"
[163] "subtype2" "subtype6" "subtype3" "subtype1" "subtype1" "subtype2"
[169] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[175] "subtype4" "subtype3" "subtype4" "subtype2" "subtype3" "subtype6"
[181] "subtype2" "subtype1" "subtype3" "subtype4" "subtype5" "subtype6"
[187] "subtype4" "subtype5" "subtype2" "subtype4" "subtype4" "subtype1"
[193] "subtype6" "subtype5" "subtype3" "subtype1" "subtype2" "subtype6"
[199] "subtype3" "subtype3" "subtype2" "subtype2" "subtype6" "subtype6"
[205] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype2"
[211] "subtype3" "subtype2" "subtype3" "subtype4" "subtype2" "subtype1"
[217] "subtype6" "subtype1" "subtype5" "subtype4" "subtype4" "subtype3"
[223] "subtype1" "subtype4" "subtype2" "subtype1" "subtype2" "subtype4"
[229] "subtype2" "subtype4" "subtype1" "subtype2" "subtype4" "subtype2"
[235] "subtype4" "subtype4" "subtype2" "subtype1" "subtype2" "subtype6"
[241] "subtype4" "subtype1" "subtype2" "subtype2" "subtype6" "subtype2"
[247] "subtype2" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[253] "subtype3" "subtype5" "subtype3" "subtype5" "subtype3" "subtype2"
[259] "subtype4" "subtype3" "subtype6" "subtype1" "subtype2" "subtype4"
[265] "subtype4" "subtype5" "subtype4" "subtype5" "subtype2" "subtype4"
[271] "subtype1" "subtype4" "subtype4" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype2" "subtype4" "subtype3" "subtype6" "subtype2"
[283] "subtype2" "subtype6" "subtype1" "subtype3" "subtype4" "subtype4"
[289] "subtype2" "subtype6" "subtype3" "subtype5" "subtype3" "subtype3"
[295] "subtype6" "subtype4" "subtype4" "subtype1" "subtype4" "subtype6"
[301] "subtype1" "subtype3" "subtype6" "subtype2" "subtype5" "subtype2"
[307] "subtype2" "subtype4" "subtype1" "subtype2" "subtype6" "subtype5"
[313] "subtype3" "subtype3" "subtype4" "subtype1" "subtype6" "subtype5"
[319] "subtype2" "subtype5" "subtype1" "subtype4" "subtype4" "subtype4"
[325] "subtype4" "subtype3" "subtype4" "subtype3" "subtype1" "subtype4"
[331] "subtype4" "subtype3" "subtype3" "subtype6" "subtype4" "subtype1"
[337] "subtype3" "subtype3" "subtype3" "subtype4" "subtype4" "subtype2"
[343] "subtype1" "subtype3" "subtype5" "subtype4" "subtype3" "subtype1"
[349] "subtype1" "subtype1" "subtype3" "subtype5" "subtype2" "subtype4"
[355] "subtype2" "subtype4" "subtype4" "subtype2" "subtype2" "subtype4"
[361] "subtype4" "subtype2" "subtype2" "subtype4" "subtype4" "subtype5"
[367] "subtype3" "subtype1" "subtype5" "subtype5" "subtype2" "subtype1"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[379] "subtype4" "subtype4" "subtype4" "subtype3" "subtype6" "subtype3"
[385] "subtype5" "subtype1" "subtype3" "subtype1" "subtype6" "subtype2"
[391] "subtype6" "subtype6" "subtype3" "subtype2" "subtype4" "subtype2"
[397] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype6"
[403] "subtype4" "subtype2" "subtype4" "subtype2" "subtype2" "subtype1"
[409] "subtype5" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[415] "subtype6" "subtype2" "subtype6" "subtype6" "subtype2" "subtype3"
[421] "subtype4" "subtype2" "subtype4" "subtype4" "subtype6" "subtype6"
[427] "subtype6" "subtype2" "subtype4" "subtype4" "subtype2" "subtype2"
[433] "subtype3" "subtype2" "subtype2" "subtype4" "subtype5" "subtype3"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[445] "subtype3" "subtype3" "subtype6" "subtype5" "subtype2" "subtype6"
[451] "subtype3" "subtype4" "subtype4" "subtype6" "subtype2" "subtype3"
[457] "subtype2" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype6" "subtype1" "subtype2" "subtype3"
[469] "subtype6" "subtype2" "subtype2" "subtype4" "subtype3" "subtype6"
[475] "subtype2" "subtype3" "subtype2" "subtype6" "subtype6" "subtype4"
[481] "subtype2" "subtype2" "subtype3" "subtype4" "subtype6" "subtype1"
[487] "subtype4" "subtype4" "subtype3" "subtype2" "subtype6" "subtype2"
[493] "subtype1" "subtype2" "subtype4" "subtype6" "subtype1" "subtype4"
[499] "subtype1" "subtype3" "subtype5" "subtype2" "subtype4" "subtype6"
[505] "subtype1" "subtype5" "subtype4" "subtype4" "subtype4" "subtype3"
[511] "subtype6" "subtype4" "subtype1" "subtype3" "subtype4" "subtype1"
[517] "subtype4" "subtype6" "subtype6" "subtype6" "subtype6" "subtype4"
[523] "subtype3" "subtype5" "subtype6" "subtype6" "subtype3" "subtype3"
[529] "subtype6" "subtype2"
D4V2, continuous
D4V3, binary
          cls
clus         0   1
  subtype1  90   0
  subtype2 128   1
  subtype3  85   2
  subtype4 136   1
  subtype5  34   2
  subtype6  80   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   90    0
  subtype2  128    1
  subtype3   85    2
  subtype4  136    1
  subtype5   34    2
  subtype6   80    0
D4V4, binary
          cls
clus        0  1
  subtype1 30 60
  subtype2 30 99
  subtype3 20 67
  subtype4 43 94
  subtype5  6 30
  subtype6 18 62
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   30   60
  subtype2   30   99
  subtype3   20   67
  subtype4   43   94
  subtype5    6   30
  subtype6   18   62
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0  79   2   9
  subtype2        1 112   0  16
  subtype3        0  72   2  13
  subtype4        0 120   1  16
  subtype5        0  31   1   4
  subtype6        0  67   0  13
D4V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 35       2      15         0 10  10   3   0    0  5   6  1   2   1
  subtype2 30       3      16         1 13  29   7   1    5  8   6  2   4   0
  subtype3 23       2      14         0 11  10   4   0    0  8   7  2   4   0
  subtype4 28       2      17         0 24  23   6   0    5  9  15  2   5   0
  subtype5 11       1       4         0  3   5   2   0    0  4   1  3   2   0
  subtype6 25       4      13         0 11   7   1   1    4  4   6  3   0   1
          vv
clus       NX
  subtype1  0
  subtype2  4
  subtype3  2
  subtype4  1
  subtype5  0
  subtype6  0
D4V6, multiclass
D4V7, continuous
D4V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1       4        6        0        1        37        22         0
  subtype2      11       12        0        2        37        35         0
  subtype3       7        4        1        2        25        20         1
  subtype4       8        8        1        0        41        34         0
  subtype5       2        6        0        1        11         3         0
  subtype6      15        6        0        2        30        12         1
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE X
  subtype1         12          1          3        2       1
  subtype2         20          4          6        0       2
  subtype3         17          0          6        2       2
  subtype4         30          8          6        1       0
  subtype5          5          2          5        1       0
  subtype6         11          0          3        0       0
D4V9, multiclass

Clustering(5) Variable = RPPA_CNMF
D5V1, survival
          sevent
clus2        0   1
  subtype1 113  22
  subtype2 121  11
  subtype3 102  11
subtype1 subtype2 subtype3 
     135      132      113 
subtype1 subtype2 subtype3 
      22       11       11 
$subtype1
TCGA-A1-A0SH TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U 
       47.24        31.79        28.01        17.98        64.11        22.03 
TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0CY 
       63.06        25.08        60.07        24.79        42.84        42.35 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0EY TCGA-A2-A0SV 
       21.14        25.84        25.02        67.50        15.95        27.12 
TCGA-A2-A0SW TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE 
       44.84        42.35        11.08        10.59         7.96         8.28 
TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A7-A0CE TCGA-A7-A0CJ 
       13.28        12.46        10.72        21.73         8.32         6.18 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A06R TCGA-A8-A06U TCGA-A8-A06X 
       12.26         8.78         9.44        17.95        29.00        31.00 
TCGA-A8-A06Y TCGA-A8-A075 TCGA-A8-A07I TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07W 
       26.01        17.00        14.01         9.99         8.98         9.99 
TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A08X TCGA-A8-A09A TCGA-A8-A09I 
       37.05         9.99        30.97        33.99         9.99        33.07 
TCGA-A8-A09M TCGA-A8-A09R TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AN-A04D TCGA-AN-A0AK 
       15.02         8.98        14.01         0.99         1.71         7.33 
TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FJ 
        6.48         0.16         0.30         0.30         0.33         7.92 
TCGA-AN-A0FL TCGA-AN-A0FV TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AN-A0XW TCGA-AO-A03L 
        7.56         0.33         0.53         0.33         5.59        80.28 
TCGA-AO-A03M TCGA-AO-A03O TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J6 TCGA-AO-A0JB 
       47.84        81.63        59.05        19.23        25.48        37.81 
TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D 
       59.61        64.60        43.36       102.54        96.10        64.04 
TCGA-AO-A12F TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TU 
       48.36        78.64        49.32        37.41        55.20        11.84 
TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U3 
       29.72        24.30        55.86         0.26         6.08        74.40 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AT TCGA-AR-A1AY 
       75.55        61.84        43.53        43.04        41.82        20.19 
TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RU TCGA-B6-A0X1 
       32.58        12.13       176.98       127.27       131.21       186.44 
TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BF TCGA-BH-A0BW TCGA-BH-A0BZ TCGA-BH-A0C0 
       39.55        51.68        25.68        11.67        49.05        41.75 
TCGA-BH-A0C3 TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E2 TCGA-BH-A0EE TCGA-BH-A18G 
       48.13        48.23         4.37        12.36        31.00         2.01 
TCGA-BH-A18P TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18V TCGA-C8-A137 
       30.28        55.63        37.51         7.36        51.12         0.85 
TCGA-C8-A138 TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 
        0.23         8.68         6.90         2.01         5.65         0.07 
TCGA-E2-A14P TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A152 
       16.01        22.75        22.62        17.03        19.43        19.33 
TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ 
       14.79        16.93        64.57 

$subtype2
TCGA-A1-A0SJ TCGA-A2-A04V TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU 
       14.01        63.12        78.64        75.55        63.02         5.16 
TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EO TCGA-A2-A0EV 
       61.48        57.53        24.20        16.31        71.70        17.92 
TCGA-A2-A0SU TCGA-A2-A0T5 TCGA-A2-A0YD TCGA-A2-A0YI TCGA-A7-A0CD TCGA-A7-A0CH 
       44.42        10.55        18.08        11.77         5.59         5.29 
TCGA-A7-A0DB TCGA-A7-A13F TCGA-A8-A06Z TCGA-A8-A07S TCGA-A8-A07Z TCGA-A8-A082 
        4.60         6.44         1.02         7.96        28.04        18.05 
TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G TCGA-A8-A08T TCGA-A8-A08Z 
       36.95        13.02         0.99        19.92        93.04        40.01 
TCGA-A8-A091 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09E TCGA-A8-A09W 
       19.07         9.99        12.00         1.02        30.97         0.99 
TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0FD TCGA-AN-A0FF 
        0.23         0.62         2.93         7.99         6.41         4.60 
TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XO 
        6.97         6.02         0.36         0.33         0.33        12.33 
TCGA-AN-A0XP TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AO-A03N TCGA-AO-A03P TCGA-AO-A0J3 
        0.30         0.33         0.33        54.08        84.69         9.93 
TCGA-AO-A0J7 TCGA-AO-A0JC TCGA-AO-A0JG TCGA-AO-A126 TCGA-AO-A12A TCGA-AO-A12B 
        8.55        50.86        14.76        93.70        90.54        77.56 
TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AS 
       65.52        41.59        28.34         5.26        51.22        40.83 
TCGA-AR-A1AV TCGA-B6-A0IB TCGA-B6-A0IG TCGA-B6-A0IO TCGA-B6-A0RL TCGA-B6-A0RM 
       42.58       129.57       146.50       110.14        81.17        78.02 
TCGA-B6-A0RP TCGA-B6-A0X0 TCGA-BH-A0B1 TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BQ 
      102.77       129.70        37.74        21.70        36.72        27.16 
TCGA-BH-A0BS TCGA-BH-A0BV TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK 
       53.92        49.94        42.90        45.80        38.01        13.91 
TCGA-BH-A0DT TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0H5 TCGA-BH-A0H9 TCGA-BH-A0HA 
       38.47        44.78        24.49        35.51        41.00        28.14 
TCGA-BH-A0HK TCGA-BH-A0HL TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0W4 
        5.85         2.37        12.89        51.29        27.25         5.75 
TCGA-BH-A0W5 TCGA-BH-A18F TCGA-BH-A18N TCGA-BH-A18S TCGA-D8-A140 TCGA-D8-A145 
       17.85         8.81        37.74        66.05         0.89         1.61 
TCGA-D8-A146 TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10E 
       11.31        25.08        38.53        11.57        24.59        13.74 
TCGA-E2-A14O TCGA-E2-A14Q TCGA-E2-A14S TCGA-E2-A14W TCGA-E2-A153 TCGA-E2-A154 
       38.53        32.02        27.42        27.39        19.27        10.68 
TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15G 
       18.18        15.81        16.50        10.36        17.00        10.36 
TCGA-E2-A15H TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15P 
        1.38        15.22         1.12        10.88        12.99        10.36 
TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BC TCGA-E2-A1BD 
       10.85         9.01         8.78        29.95         9.76        10.42 

$subtype3
TCGA-A2-A04N TCGA-A2-A04Q TCGA-A2-A0CP TCGA-A2-A0CZ TCGA-A2-A0ER TCGA-A2-A0ES 
      103.66        41.92        82.03        43.99        62.53        32.91 
TCGA-A2-A0EU TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0ST TCGA-A2-A0T3 TCGA-A2-A0T4 
       24.10        25.32        18.05        54.02        14.99        12.99 
TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YK TCGA-A2-A0YL 
       11.31        13.05        21.14         9.50        10.98         8.81 
TCGA-A2-A0YT TCGA-A7-A0CG TCGA-A7-A0D9 TCGA-A8-A06P TCGA-A8-A076 TCGA-A8-A079 
       23.77         5.46         5.23        13.02        53.95         9.01 
TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07P TCGA-A8-A084 TCGA-A8-A08O TCGA-A8-A095 
       19.99        18.94        10.98        15.06        30.97        41.95 
TCGA-A8-A09K TCGA-A8-A0A4 TCGA-AN-A0FS TCGA-AN-A0FX TCGA-AN-A0XN TCGA-AO-A0J5 
       29.95        13.02         6.28         0.33         0.33        24.16 
TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JF TCGA-AO-A0JI TCGA-AO-A0JJ TCGA-AO-A0JM 
        9.11        41.26        11.64        38.53        49.71        60.03 
TCGA-AO-A128 TCGA-AO-A12E TCGA-AQ-A04L TCGA-AR-A0TX TCGA-AR-A0TZ TCGA-AR-A0U2 
       94.59        57.27       109.94         0.49        43.17        83.87 
TCGA-AR-A0U4 TCGA-AR-A1AJ TCGA-AR-A1AL TCGA-AR-A1AP TCGA-AR-A1AU TCGA-AR-A1AW 
       53.49        52.73        48.82        39.95        46.32        35.24 
TCGA-AR-A1AX TCGA-B6-A0I2 TCGA-B6-A0I8 TCGA-B6-A0IK TCGA-B6-A0RG TCGA-B6-A0RH 
       36.26       125.79        24.62        18.77        68.45       188.98 
TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RQ TCGA-B6-A0RT TCGA-B6-A0RV TCGA-B6-A0WX 
      172.96       162.02       140.48        89.46       157.41        21.47 
TCGA-BH-A0AU TCGA-BH-A0AV TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B4 
       24.53        38.79        25.55        28.50        46.92        39.16 
TCGA-BH-A0B5 TCGA-BH-A0B7 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BO TCGA-BH-A0BP 
       48.36        56.98        37.22        32.02        35.67        48.69 
TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0C1 TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DP 
       53.65        45.57        43.99        23.44        22.13        15.65 
TCGA-BH-A0DS TCGA-BH-A0DV TCGA-BH-A0E1 TCGA-BH-A0E6 TCGA-BH-A0E9 TCGA-BH-A0EA 
        2.53        45.17        15.68         9.60        46.19        32.65 
TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0HN TCGA-BH-A0HP 
       24.43        30.15        24.56        23.05        16.96        13.61 
TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A18J TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18U 
       28.50         5.59        20.09        26.66        72.56        51.39 
TCGA-E2-A108 TCGA-E2-A10C TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A15C TCGA-E2-A15F 
        4.08        28.04        29.26        24.59        16.31        15.39 
TCGA-E2-A15M TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1B6 
        7.69        41.79        44.75        25.45        11.11 

subtype1 subtype2 subtype3 
    0.07     0.23     0.33 
subtype1 subtype2 subtype3 
  186.44   146.50   188.98 
subtype1 subtype2 subtype3 
  22.750   17.985   28.500 
[1] "0.1 - 186.4 (22.8)" "0.2 - 146.5 (18.0)" "0.3 - 189.0 (28.5)"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[331] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2"
D5V2, continuous
D5V3, binary
          cls
clus         0   1
  subtype1 152   0
  subtype2 132   4
  subtype3 119   1
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  152    0
  subtype2  132    4
  subtype3  119    1
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      152      132      119
  MALE          0        4        1
D5V4, binary
          cls
clus         0   1
  subtype1  47 105
  subtype2  42  94
  subtype3  36  84
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   47  105
  subtype2   42   94
  subtype3   36   84
     clus
vv    subtype1 subtype2 subtype3
  NO        47       42       36
  YES      105       94       84
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 143   8   1
  subtype2        0 129   3   4
  subtype3        1 114   3   2
D5V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 41       2      27 24  14   3   0    4 11  11  4   7   1  3
  subtype2 31       6      28 10  35   4   1    3  7   3  2   4   0  2
  subtype3 28       5      24 14  14   1   0    5  9  11  3   4   0  2
D5V6, multiclass
D5V7, continuous
D5V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1       6        8        0        55        36         24          2
  subtype2      11       13        1        46        38         14          6
  subtype3      13       10        3        36        20         24          5
          vv
clus       STAGE IIIC STAGE IV STAGE X
  subtype1         10        8       3
  subtype2          1        3       3
  subtype3          4        3       2
D5V9, multiclass

Clustering(6) Variable = RPPA_CHIERARCHICAL
D6V1, survival
          sevent
clus2        0   1
  subtype1 135  17
  subtype2 102  10
  subtype3  99  17
subtype1 subtype2 subtype3 
     152      112      116 
subtype1 subtype2 subtype3 
      17       10       17 
$subtype1
TCGA-A1-A0SH TCGA-A2-A04V TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT 
       47.24        63.12        25.08        78.64        75.55        63.02 
TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0CY TCGA-A2-A0D3 TCGA-A2-A0D4 
        5.16        61.48        57.53        42.35        24.20        16.31 
TCGA-A2-A0EO TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0T5 TCGA-A2-A0YD TCGA-A2-A0YH 
       71.70        27.12        44.84        10.55        18.08        12.46 
TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0DB TCGA-A7-A13F TCGA-A8-A06R 
        5.59         5.29         6.18         4.60         6.44        17.95 
TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A07S TCGA-A8-A07W 
       29.00        31.00        26.01         1.02         7.96         9.99 
TCGA-A8-A07Z TCGA-A8-A082 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G 
       28.04        18.05        36.95        13.02         0.99        19.92 
TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A091 TCGA-A8-A099 TCGA-A8-A09A TCGA-A8-A09C 
       93.04        40.01        19.07         9.99         9.99         1.02 
TCGA-A8-A09E TCGA-A8-A09M TCGA-A8-A09R TCGA-A8-A09W TCGA-A8-A0A4 TCGA-AN-A04A 
       30.97        15.02         8.98         0.99        13.02         2.93 
TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF 
        7.99         7.33         0.16         0.30         6.41         4.60 
TCGA-AN-A0FK TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XO TCGA-AN-A0XP 
        6.97         0.36         0.33         0.33        12.33         0.30 
TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A03N 
        0.33         0.33         5.59        80.28        47.84        54.08 
TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0JB TCGA-AO-A0JC 
       81.63        84.69         9.93         8.55        37.81        50.86 
TCGA-AO-A0JD TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A126 TCGA-AO-A12A TCGA-AO-A12B 
       59.61        14.76        49.71        93.70        90.54        77.56 
TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A12H TCGA-AR-A0TR TCGA-AR-A0TT TCGA-AR-A0TV 
       57.27        41.59        28.34         5.26        55.20        29.72 
TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U3 TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AV 
       24.30        55.86        74.40        39.95        40.83        42.58 
TCGA-B6-A0IB TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RP TCGA-B6-A0X0 TCGA-BH-A0BF 
      129.57        81.17        78.02       102.77       129.70        25.68 
TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0C3 
       27.16        53.92        49.94        49.05        41.75        48.13 
TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DT TCGA-BH-A0E2 
       42.90        45.80        38.01        13.91        38.47        12.36 
TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0H5 TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HK 
       44.78        24.49        35.51        41.00        28.14         5.85 
TCGA-BH-A0HL TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0W4 TCGA-BH-A0W5 
        2.37        12.89        51.29        27.25         5.75        17.85 
TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A146 
       37.74        30.28        66.05         8.68         0.89        11.31 
TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A14Q 
       25.08        38.53        11.57        24.59        13.74        32.02 
TCGA-E2-A14S TCGA-E2-A14W TCGA-E2-A14Z TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 
       27.42        27.39        17.03        19.27        10.68        18.18 
TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15G TCGA-E2-A15J 
       15.81        16.50        10.36        17.00        10.36        15.22 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T 
        1.12        10.88        12.99        10.85         9.01         8.78 
TCGA-E2-A1B4 TCGA-E2-A1BD 
       29.95        10.42 

$subtype2
TCGA-A1-A0SJ TCGA-A2-A04N TCGA-A2-A04Q TCGA-A2-A0CP TCGA-A2-A0CZ TCGA-A2-A0ER 
       14.01       103.66        41.92        82.03        43.99        62.53 
TCGA-A2-A0ES TCGA-A2-A0EU TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SU 
       32.91        24.10        17.92        25.32        18.05        44.42 
TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YF 
       14.99        12.99        11.31        13.05        21.14         9.50 
TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A0YT TCGA-A7-A0CG TCGA-A7-A0D9 
       11.77        10.98         8.81        23.77         5.46         5.23 
TCGA-A8-A06P TCGA-A8-A079 TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07P TCGA-A8-A084 
       13.02         9.01        19.99        18.94        10.98        15.06 
TCGA-A8-A08O TCGA-A8-A095 TCGA-A8-A09B TCGA-A8-A09K TCGA-AN-A041 TCGA-AN-A049 
       30.97        41.95        12.00        29.95         0.23         0.62 
TCGA-AN-A0FS TCGA-AN-A0XN TCGA-AO-A0J5 TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JF 
        6.28         0.33        24.16         9.11        41.26        11.64 
TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A12C TCGA-AQ-A04L TCGA-AR-A0TZ TCGA-AR-A1AK 
       38.53        60.03        65.52       109.94        43.17        51.22 
TCGA-AR-A1AL TCGA-AR-A1AU TCGA-AR-A1AW TCGA-AR-A1AX TCGA-B6-A0I2 TCGA-B6-A0I8 
       48.82        46.32        35.24        36.26       125.79        24.62 
TCGA-B6-A0IG TCGA-B6-A0IK TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RN TCGA-B6-A0RO 
      146.50        18.77       110.14        68.45       172.96       162.02 
TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 
      140.48       157.41        24.53        25.55        28.50        46.92 
TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ 
       37.74        39.16        48.36        37.22        32.02        21.70 
TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0C1 
       36.72        35.67        48.69        53.65        45.57        43.99 
TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DP TCGA-BH-A0DS TCGA-BH-A0DV TCGA-BH-A0E1 
       23.44        22.13        15.65         2.53        45.17        15.68 
TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0H6 TCGA-BH-A0H7 
       46.19        32.65        24.43        30.15        24.56        23.05 
TCGA-BH-A0HN TCGA-BH-A0HP TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A18F TCGA-BH-A18J 
       16.96        13.61        28.50         5.59         8.81        20.09 
TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18U TCGA-D8-A145 TCGA-E2-A108 TCGA-E2-A10C 
       26.66        72.56        51.39         1.61         4.08        28.04 
TCGA-E2-A14O TCGA-E2-A14T TCGA-E2-A15C TCGA-E2-A15F TCGA-E2-A15M TCGA-E2-A15P 
       38.53        29.26        16.31        15.39         7.69        10.36 
TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1BC 
       41.79        44.75        25.45         9.76 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04W 
       31.79        28.01        17.98        64.11        22.03        63.06 
TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 
       60.07        24.79        42.84        21.14        25.84        25.02 
TCGA-A2-A0EQ TCGA-A2-A0EY TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T1 
       67.50        15.95        54.02        42.35        11.08        10.59 
TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YG TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A7-A0CE 
        7.96         8.28        13.28        10.72        21.73         8.32 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A07I 
       12.26         8.78         9.44        17.00        53.95        14.01 
TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A08X 
        9.99         8.98        37.05         9.99        30.97        33.99 
TCGA-A8-A09I TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AR 
       33.07        14.01         0.99         1.71         6.48         0.30 
TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FX 
        0.33         7.92         7.56         6.02         0.33         0.33 
TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J6 TCGA-AO-A0JE 
        0.53         0.33        59.05        19.23        25.48        64.60 
TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F 
       43.36       102.54        94.59        96.10        64.04        48.36 
TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 
       78.64        49.32        37.41        11.84         0.49         0.26 
TCGA-AR-A0U1 TCGA-AR-A0U2 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ 
        6.08        83.87        53.49        75.55        61.84        52.73 
TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AT TCGA-AR-A1AY TCGA-B6-A0I6 TCGA-B6-A0I9 
       43.53        43.04        41.82        20.19        32.58        12.13 
TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RH TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      176.98       127.27       188.98        89.46       131.21        21.47 
TCGA-B6-A0X1 TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BW 
      186.44        38.79        39.55        56.98        51.68        11.67 
TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A18G TCGA-BH-A18Q 
       48.23         4.37         9.60        31.00         2.01        55.63 
TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18V TCGA-C8-A137 TCGA-C8-A138 TCGA-D8-A13Z 
       37.51         7.36        51.12         0.85         0.23         6.90 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-E2-A14P TCGA-E2-A14V TCGA-E2-A14X 
        2.01         5.65         0.07        16.01        24.59        22.75 
TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A152 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15H 
       22.62        19.43        19.33        14.79        16.93         1.38 
TCGA-E2-A1AZ TCGA-E2-A1B6 
       64.57        11.11 

subtype1 subtype2 subtype3 
    0.16     0.23     0.07 
subtype1 subtype2 subtype3 
  129.70   172.96   188.98 
subtype1 subtype2 subtype3 
   24.25    25.50    21.88 
[1] "0.2 - 129.7 (24.2)" "0.2 - 173.0 (25.5)" "0.1 - 189.0 (21.9)"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[331] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[379] "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[331] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[379] "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[331] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[379] "subtype2" "subtype1"
D6V2, continuous
D6V3, binary
          cls
clus         0   1
  subtype1 159   4
  subtype2 114   1
  subtype3 130   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  159    4
  subtype2  114    1
  subtype3  130    0
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      159      114      130
  MALE          4        1        0
D6V4, binary
          cls
clus         0   1
  subtype1  48 115
  subtype2  36  79
  subtype3  41  89
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   48  115
  subtype2   36   79
  subtype3   41   89
     clus
vv    subtype1 subtype2 subtype3
  NO        48       36       41
  YES      115       79       89
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 153   6   4
  subtype2        1 109   3   2
  subtype3        0 124   5   1
D6V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3C NX
  subtype1 42       5      31 14  33   3   1    4 13   6  2   5   0  4
  subtype2 22       6      23 11  20   1   0    5  7  11  3   4   0  2
  subtype3 36       2      25 23  10   4   0    3  7   8  4   6   1  1
D6V6, multiclass
D6V7, continuous
D6V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1      14       12        1        52        42         23          7
  subtype2      11       12        3        31        21         23          5
  subtype3       5        7        0        54        31         16          1
          vv
clus       STAGE IIIC STAGE IV STAGE X
  subtype1          2        6       4
  subtype2          4        3       2
  subtype3          9        5       2
D6V9, multiclass

Clustering(7) Variable = MRNASEQ_CNMF
D7V1, survival
          sevent
clus2        0   1
  subtype1 124  19
  subtype2  70   7
  subtype3  84   6
  subtype4  93  26
  subtype5 146  19
  subtype6   9   2
  subtype7 131  14
  subtype8  27   1
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
     143       77       90      119      165       11      145       28 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
      19        7        6       26       19        2       14        1 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q 
        8.52        31.79        28.01        19.17        17.98        41.92 
TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A0CM TCGA-A2-A0D0 TCGA-A2-A0D2 TCGA-A2-A0ST 
       64.11        22.03        24.79        21.14        25.02        54.02 
TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM 
       42.35        11.08         7.96         8.28        10.72        21.73 
TCGA-A2-A1G1 TCGA-A2-A25F TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E 
       12.20         3.72         8.32        12.26         8.78         9.44 
TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I TCGA-A7-A3IY TCGA-A7-A3J0 TCGA-A8-A07C 
        8.45         6.87         4.01         4.96         2.50        19.07 
TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08R TCGA-A8-A08X TCGA-AC-A2BK 
        9.99         8.98         9.96         0.99        33.99        38.53 
TCGA-AC-A2QH TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0AT 
        1.02         1.71         6.48         0.16         0.30         0.33 
TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FX TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U 
        7.92         7.56         0.33         0.53         0.33        59.05 
TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 
        9.67        25.48        43.36       102.54        94.59        96.10 
TCGA-AO-A12F TCGA-AO-A1KR TCGA-AQ-A04J TCGA-AR-A0TP TCGA-AR-A0TS TCGA-AR-A0TU 
       48.36        70.36         5.23        78.64        37.41        11.84 
TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO 
        0.26        53.49        75.55        61.84        52.73        43.53 
TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24Q TCGA-AR-A251 TCGA-AR-A256 
       43.04        17.19        20.19        66.02        45.14        93.83 
TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0IJ TCGA-B6-A0IQ 
       20.38        77.62       125.79        32.58       176.98       127.27 
TCGA-B6-A0RE TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-B6-A1KF 
      211.53        89.46       131.21        21.47       186.44       101.52 
TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BW TCGA-BH-A0DL 
       38.79        39.55        24.85        44.02        11.67        48.23 
TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18Q 
        4.37         9.60         5.59        12.23         2.01        55.63 
TCGA-BH-A18T TCGA-BH-A18V TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN 
        7.36        51.12        25.81        97.48       114.12        72.07 
TCGA-C8-A1HJ TCGA-C8-A27B TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JL 
        0.16         0.99         2.01         5.65         0.07         8.71 
TCGA-D8-A1JM TCGA-D8-A1XK TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A27F 
        7.82        10.72         5.82         6.35         3.85         7.46 
TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14N TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Y 
        4.60         4.73        44.38        27.78        22.75        22.62 
TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1II TCGA-E2-A1LG 
       19.43        14.79        16.93        64.57        27.95        11.51 
TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RB 
       94.52        90.41         8.75        33.34         7.86         0.69 
TCGA-E9-A1RH TCGA-E9-A243 TCGA-E9-A244 TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P7 
        0.46         1.41         0.66        15.22        16.47        20.88 
TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH TCGA-GI-A2C9 TCGA-GM-A2DF 
        7.86        19.99         4.57        23.11        42.71 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SH TCGA-A2-A0CZ TCGA-A2-A0EO 
       14.37        43.40        48.10        47.24        43.99        71.70 
TCGA-A2-A0ES TCGA-A2-A0EW TCGA-A2-A0SU TCGA-A2-A0T7 TCGA-A2-A0YK TCGA-A2-A0YL 
       32.91        25.32        44.42        13.05        10.98         8.81 
TCGA-A2-A1G0 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A3KC TCGA-A7-A0CG 
       12.49         4.34        42.25        97.58        11.93         5.46 
TCGA-A8-A08O TCGA-A8-A09A TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-AC-A2FB TCGA-AC-A2FF 
       30.97         9.99        13.02        21.04         1.45        55.40 
TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AN-A0FS TCGA-AO-A03M TCGA-AO-A03R TCGA-AO-A12A 
       36.99        38.79         6.28        47.84        56.12        90.54 
TCGA-AO-A12C TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A1KO TCGA-AR-A1AK TCGA-AR-A1AL 
       65.52        57.27        41.59        14.73        51.22        48.82 
TCGA-AR-A1AX TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A2LH TCGA-AR-A2LO TCGA-AR-A2LQ 
       36.26        53.26        50.96        20.22        20.81        16.96 
TCGA-B6-A0IE TCGA-B6-A0IH TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WY TCGA-BH-A0AZ 
       65.69       112.37       140.48       157.41       113.75        28.50 
TCGA-BH-A0BC TCGA-BH-A0BM TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DK 
       32.02        36.72        31.17        23.44        22.13        13.91 
TCGA-BH-A0E9 TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0HQ TCGA-BH-A1FB TCGA-BH-A1FH 
       46.19        37.78        35.51        36.85       120.62        36.92 
TCGA-BH-A201 TCGA-C8-A1HI TCGA-D8-A145 TCGA-D8-A27I TCGA-D8-A27V TCGA-E2-A14Q 
        6.87         0.07         1.61         6.08         2.40        32.02 
TCGA-E2-A15E TCGA-E2-A15H TCGA-E2-A1B1 TCGA-E2-A1IJ TCGA-E2-A1IO TCGA-EW-A1IW 
       17.00         1.38        44.75        23.84        14.73         8.28 
TCGA-EW-A1J2 TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FV TCGA-GM-A2DI 
        4.57         4.57        28.77         7.82        61.91 

$subtype3
TCGA-A1-A0SG TCGA-A2-A04N TCGA-A2-A04V TCGA-A2-A0CP TCGA-A2-A0EV TCGA-A2-A0EX 
       14.24       103.66        63.12        82.03        17.92        18.05 
TCGA-A2-A0T6 TCGA-A7-A0CJ TCGA-A7-A26H TCGA-A7-A26J TCGA-A7-A2KD TCGA-A8-A06P 
       11.31         6.18         2.10         2.20         5.95        13.02 
TCGA-A8-A07F TCGA-A8-A07G TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A092 TCGA-A8-A093 
       18.94        18.94        93.04        40.01        16.01        17.92 
TCGA-A8-A097 TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A0A2 TCGA-A8-A0A9 TCGA-A8-A0AB 
       12.00        12.00         1.02        19.00        13.02        17.00 
TCGA-AC-A23E TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AN-A03Y TCGA-AN-A0XN TCGA-AN-A0XO 
        2.37        10.82         1.45         0.33         0.33        12.33 
TCGA-AN-A0XS TCGA-AN-A0XW TCGA-AR-A24K TCGA-AR-A24N TCGA-AR-A24P TCGA-AR-A24S 
        0.33         5.59        50.89        68.19         0.85        62.07 
TCGA-AR-A24V TCGA-AR-A255 TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM TCGA-B6-A0RH 
       54.18        34.78        42.84         7.33        40.01       188.98 
TCGA-B6-A0RI TCGA-B6-A0RN TCGA-B6-A0WS TCGA-BH-A0B1 TCGA-BH-A0B5 TCGA-BH-A0BF 
      223.40       172.96        97.48        37.74        48.36        25.68 
TCGA-BH-A0BT TCGA-BH-A0DT TCGA-BH-A0E7 TCGA-BH-A0GY TCGA-BH-A0H6 TCGA-BH-A0H7 
       45.57        38.47        44.78        30.15        24.56        23.05 
TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18I TCGA-BH-A18M TCGA-BH-A1EO 
        5.75        17.85        18.35         7.23        72.56        91.99 
TCGA-BH-A1F5 TCGA-BH-A1FE TCGA-C8-A26W TCGA-D8-A141 TCGA-D8-A1JD TCGA-D8-A1JH 
       89.16        74.73         0.23         3.72         8.98         9.34 
TCGA-D8-A1JP TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XM TCGA-D8-A1XS TCGA-D8-A1XY 
        5.49         9.01         6.61         7.17         1.64         2.66 
TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A27L TCGA-D8-A27T TCGA-E2-A10F TCGA-E2-A14Z 
        3.78         2.37         4.11         4.44        11.84        17.03 
TCGA-E2-A153 TCGA-E2-A15C TCGA-E2-A1IH TCGA-E2-A1IN TCGA-E2-A1L9 TCGA-E9-A1R5 
       19.27        16.31        21.63        12.89        12.76         1.38 
TCGA-E9-A1RC TCGA-E9-A1RI TCGA-EW-A1IX TCGA-EW-A1J5 TCGA-EW-A1OZ TCGA-EW-A1P6 
       40.37         1.58        35.57         7.46        30.94        10.26 

$subtype4
TCGA-A1-A0SI TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A04Y 
       20.84         7.96        39.32        63.06        44.35        25.08 
TCGA-A2-A0CW TCGA-A2-A0CX TCGA-A2-A0D1 TCGA-A2-A0EY TCGA-A2-A0SV TCGA-A2-A0SW 
       57.53        42.84        25.84        15.95        27.12        44.84 
TCGA-A2-A0T1 TCGA-A2-A0YG TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A06U TCGA-A8-A075 
       10.59        13.28         1.02        17.95        29.00        17.00 
TCGA-A8-A076 TCGA-A8-A07B TCGA-A8-A07E TCGA-A8-A07I TCGA-A8-A084 TCGA-A8-A08B 
       53.95        33.01        19.99        14.01        15.06        23.08 
TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A09I TCGA-A8-A09N TCGA-A8-A09W 
       37.05         9.99        30.97        33.07         1.02         0.99 
TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AC-A23C TCGA-AC-A23H TCGA-AN-A04C TCGA-AN-A0AJ 
       14.01         0.99         0.95         2.66         1.78         7.99 
TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AO-A03L TCGA-AO-A03N TCGA-AO-A0J2 TCGA-AO-A0JA 
        6.02         0.33        80.28        54.08        19.23        11.38 
TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JM TCGA-AO-A12D TCGA-AQ-A04L TCGA-AQ-A0Y5 
       59.61        64.60        60.03        64.04       109.94         5.62 
TCGA-AR-A0TX TCGA-AR-A24U TCGA-AR-A250 TCGA-AR-A254 TCGA-B6-A0I8 TCGA-B6-A0I9 
        0.49        53.36        56.12        39.85        24.62        12.13 
TCGA-B6-A0IG TCGA-B6-A0IK TCGA-B6-A0RS TCGA-B6-A0WW TCGA-B6-A1KN TCGA-BH-A0AW 
      146.50        18.77       100.67        17.95       109.48        20.45 
TCGA-BH-A0B7 TCGA-BH-A0BA TCGA-BH-A0BR TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0C1 
       56.98        37.22        53.65        49.05        41.75        43.99 
TCGA-BH-A0DX TCGA-BH-A0DZ TCGA-BH-A0EE TCGA-BH-A0HY TCGA-BH-A18J TCGA-BH-A18K 
       47.41        16.27        31.00        28.50        20.09        90.81 
TCGA-BH-A18P TCGA-BH-A18R TCGA-BH-A18U TCGA-BH-A1EN TCGA-BH-A1EV TCGA-BH-A1EX 
       30.28        37.51        51.39        67.46        12.00        49.58 
TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1FU TCGA-BH-A202 TCGA-BH-A203 TCGA-BH-A208 
       17.69        31.53        72.07         0.72        38.60        57.83 
TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A26X TCGA-C8-A26Y 
        0.85         0.23         0.23         0.07         0.36         0.43 
TCGA-C8-A274 TCGA-C8-A275 TCGA-C8-A278 TCGA-D8-A13Z TCGA-D8-A1J8 TCGA-D8-A1J9 
        0.03         0.03         0.03         6.90         8.42         8.15 
TCGA-D8-A1JA TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JJ TCGA-D8-A1JK TCGA-D8-A1JN 
        0.59         3.16         6.15         9.01         3.58         7.13 
TCGA-D8-A1XJ TCGA-D8-A1Y3 TCGA-D8-A27N TCGA-E2-A10C TCGA-E2-A14P TCGA-E2-A14V 
       11.57         4.08         4.77        28.04        16.01        24.59 
TCGA-E2-A152 TCGA-E2-A1B0 TCGA-E2-A1LB TCGA-E9-A1RF TCGA-E9-A226 TCGA-E9-A248 
       19.33        41.79        31.96         1.25         0.53         0.69 
TCGA-EW-A1PC TCGA-EW-A2FR TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DH 
        6.12        36.82        53.10        43.04        42.28 

$subtype5
TCGA-A1-A0SJ TCGA-A1-A0SQ TCGA-A2-A04R TCGA-A2-A0CT TCGA-A2-A0CU TCGA-A2-A0D4 
       14.01        18.18        77.72        63.02         5.16        16.31 
TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0YH 
       62.53        26.53        24.10        14.99        12.99        12.46 
TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B 
       23.77        15.12         7.27        30.74        12.23         8.48 
TCGA-A2-A25E TCGA-A7-A0CD TCGA-A7-A0D9 TCGA-A7-A13F TCGA-A7-A3IZ TCGA-A8-A06O 
       82.55         5.59         5.23         6.44         4.87        13.02 
TCGA-A8-A06X TCGA-A8-A06Z TCGA-A8-A079 TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07W 
       31.00         1.02         9.01        17.00        10.98         9.99 
TCGA-A8-A082 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I 
       18.05        36.95        13.02        18.05        19.92        12.00 
TCGA-A8-A091 TCGA-A8-A09D TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09Q TCGA-A8-A09R 
       19.07        13.02        29.95        15.02        25.02         8.98 
TCGA-AC-A2BM TCGA-AN-A03X TCGA-AN-A041 TCGA-AN-A04A TCGA-AN-A0AK TCGA-AN-A0FD 
       38.20         0.33         0.23         2.93         7.33         6.41 
TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XT TCGA-AO-A03P TCGA-AO-A03T 
        0.36         0.33         0.33         0.33        84.69        39.02 
TCGA-AO-A03V TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0JG TCGA-AO-A0JI TCGA-AO-A126 
       29.13         9.93         8.55        14.76        38.53        93.70 
TCGA-AO-A12H TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H 
       28.34        82.62        49.94         0.53        17.79        14.43 
TCGA-AR-A0TQ TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U2 
       49.32        29.72        24.30        55.86        43.17        83.87 
TCGA-AR-A0U3 TCGA-AR-A1AU TCGA-AR-A24H TCGA-AR-A24L TCGA-AR-A24R TCGA-AR-A252 
       74.40        46.32       109.58        73.02        57.37        40.64 
TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RL TCGA-B6-A0RM 
      126.12        84.59       110.14        68.45        81.17        78.02 
TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-BH-A0AU TCGA-BH-A0B4 
      177.40        79.63        68.94        43.59        24.53        39.16 
TCGA-BH-A0B8 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0E2 TCGA-BH-A0EI TCGA-BH-A0GZ 
       51.58        42.90        45.80        12.36        24.43        10.78 
TCGA-BH-A0H0 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A18L 
       15.16        28.14        26.50        51.29        27.25        26.66 
TCGA-BH-A18N TCGA-BH-A1ES TCGA-BH-A1EW TCGA-BH-A1F8 TCGA-BH-A1FG TCGA-BH-A1FM 
       37.74       113.82        55.69        24.62       122.89        45.63 
TCGA-BH-A1FR TCGA-BH-A204 TCGA-C8-A1HN TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A 
      144.59        83.31         0.07         0.13         0.20        12.20 
TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A1JC TCGA-D8-A1X5 TCGA-D8-A1X9 TCGA-D8-A1XD 
        8.68         0.89         5.85         5.62        12.49         5.10 
TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XZ TCGA-D8-A1Y0 TCGA-D8-A27R TCGA-D8-A27W 
        6.48         6.44         3.95         5.46         2.96         0.49 
TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A14S TCGA-E2-A14T 
       38.24        51.12        38.53        11.57        27.42        29.26 
TCGA-E2-A14W TCGA-E2-A155 TCGA-E2-A15A TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S 
       27.39        18.18        16.50        12.99        10.85         9.01 
TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1L7 TCGA-E2-A1LA TCGA-E9-A1R2 TCGA-E9-A1R4 
       32.32        24.82        20.81        15.22         0.62         0.95 
TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RE TCGA-E9-A245 TCGA-E9-A247 TCGA-E9-A295 
        2.76         1.12         1.55         0.82         0.39         0.69 
TCGA-E9-A2JS TCGA-E9-A3HO TCGA-EW-A1J1 TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OY 
        0.43         0.62         9.27        19.56        18.48        19.50 
TCGA-EW-A1P0 TCGA-EW-A1PA TCGA-EW-A1PD TCGA-EW-A2FS TCGA-EW-A2FW TCGA-GI-A2C8 
       36.85         8.78         5.72        38.56         6.25         6.97 
TCGA-GM-A2DC TCGA-GM-A2DK TCGA-GM-A2DO 
       53.52        62.33        53.33 

$subtype6
TCGA-A2-A0CL TCGA-A2-A0EQ TCGA-A2-A25D TCGA-AO-A03O TCGA-AO-A0JC TCGA-AR-A0TT 
       60.07        67.50         7.99        81.63        50.86        55.20 
TCGA-AR-A1AW TCGA-BH-A209 TCGA-C8-A1HM TCGA-D8-A1XL TCGA-EW-A1OV 
       35.24       130.16         0.20        10.49        17.16 

$subtype7
TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CV TCGA-A2-A0D3 TCGA-A2-A0EM TCGA-A2-A0EN 
       78.64        75.55        61.48        24.20        90.64        82.68 
TCGA-A2-A0T5 TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YI TCGA-A2-A25C 
       10.55        21.14        18.08         9.50        11.77         9.37 
TCGA-A2-A3KD TCGA-A7-A0CH TCGA-A7-A0DB TCGA-A7-A13G TCGA-A7-A26E TCGA-A7-A3J1 
       26.40         5.29         4.60         6.84        13.84         2.47 
TCGA-A8-A06T TCGA-A8-A06Y TCGA-A8-A07S TCGA-A8-A08C TCGA-A8-A08S TCGA-A8-A095 
       41.06        26.01         7.96        19.96        19.07        41.95 
TCGA-A8-A099 TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A0A1 TCGA-A8-A0AD TCGA-AC-A3HN 
        9.99        19.00        15.02        12.00        38.04         0.69 
TCGA-AC-A3OD TCGA-AN-A046 TCGA-AN-A049 TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0XP 
        1.15         0.33         0.62         4.60         6.97         0.30 
TCGA-AN-A0XR TCGA-AN-A0XV TCGA-AO-A0J8 TCGA-AO-A0JJ TCGA-AO-A125 TCGA-AO-A12B 
        0.33         5.33         9.11        49.71        99.22        77.56 
TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AR-A0TR TCGA-AR-A1AN TCGA-AR-A1AP TCGA-AR-A1AS 
        7.56         5.33         5.26        43.69        39.95        40.83 
TCGA-AR-A1AV TCGA-AR-A24M TCGA-AR-A24O TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A2LE 
       42.58        65.42        65.65        48.16        51.75       128.65 
TCGA-B6-A0I5 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IP TCGA-B6-A0RO 
      149.56       220.87       129.57        50.70       110.93       162.02 
TCGA-B6-A0RP TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A1KI TCGA-B6-A2IU 
      102.77       129.57       129.70        28.24        48.10       159.12 
TCGA-BH-A0B0 TCGA-BH-A0BD TCGA-BH-A0BJ TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BV 
       46.92        18.21        21.70        27.16        53.92        49.94 
TCGA-BH-A0DH TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DS TCGA-BH-A0E1 TCGA-BH-A0EA 
       38.01        17.26        15.65         2.53        15.68        32.65 
TCGA-BH-A0EB TCGA-BH-A0H9 TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HO TCGA-BH-A0HP 
       24.49        41.00        23.90        20.35         2.50        13.61 
TCGA-BH-A0HU TCGA-BH-A0W3 TCGA-BH-A18S TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1FD 
       12.89         5.92        66.05        82.85        42.28        33.14 
TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A28Q TCGA-C8-A26V TCGA-D8-A146 TCGA-D8-A1JE 
       63.35        55.00         6.44         0.30        11.31         1.87 
TCGA-D8-A1JI TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X8 
        0.69         3.45         4.04         7.76         2.79         8.94 
TCGA-D8-A1XC TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A27E 
        2.66         7.96         5.52         4.90         4.80         5.98 
TCGA-D8-A27K TCGA-D8-A27P TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A14O TCGA-E2-A154 
        3.88         0.76        24.59        13.74        38.53        10.68 
TCGA-E2-A156 TCGA-E2-A15D TCGA-E2-A15G TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K 
       15.81        10.36        10.36        13.51        15.22         1.12 
TCGA-E2-A15L TCGA-E2-A15P TCGA-E2-A1B4 TCGA-E2-A1BD TCGA-E2-A1IF TCGA-E2-A1IK 
       10.88        10.36        29.95        10.42        31.43        17.03 
TCGA-E2-A1IL TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L8 TCGA-E2-A3DX TCGA-E9-A1R3 
        0.46         4.18        43.13        33.37         7.13         2.10 
TCGA-E9-A1RD TCGA-E9-A227 TCGA-E9-A249 TCGA-E9-A24A TCGA-EW-A1IY TCGA-EW-A1J3 
        0.66         0.79         0.92         0.33         8.48         8.28 
TCGA-EW-A1P3 TCGA-EW-A1P5 TCGA-EW-A1PE TCGA-GM-A2D9 TCGA-GM-A2DM TCGA-GM-A2DN 
       32.45        12.00         3.48        59.57        76.64        77.33 
TCGA-GM-A3NY 
       24.43 

$subtype8
TCGA-A2-A0SY TCGA-A2-A1FZ TCGA-A8-A07J TCGA-AC-A2FO TCGA-AN-A0FN TCGA-AN-A0XL 
       37.94        13.45        12.00        50.70         7.17         0.33 
TCGA-AO-A0J5 TCGA-AO-A0J9 TCGA-AO-A0JF TCGA-AR-A2LN TCGA-B6-A0X7 TCGA-BH-A0AY 
       24.16        41.26        11.64        17.06        58.88        25.55 
TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0C3 TCGA-BH-A0DQ TCGA-BH-A0DV TCGA-BH-A0HK 
       35.67        48.69        48.13         3.22        45.17         5.85 
TCGA-BH-A18F TCGA-D8-A1JU TCGA-D8-A27G TCGA-E2-A108 TCGA-E2-A15M TCGA-E2-A1B5 
        8.81         3.48         6.87         4.08         7.69        25.45 
TCGA-E2-A1BC TCGA-E9-A2JT TCGA-GM-A2DA TCGA-GM-A2DL 
        9.76         0.76       194.27        90.81 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
    0.07     0.07     0.23     0.03     0.07     0.20     0.30     0.33 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
  211.53   157.41   223.40   146.50   177.40   130.16   220.87   194.27 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
  19.070   32.020   16.160   20.090   18.180   50.860   15.680   15.255 
[1] "0.1 - 211.5 (19.1)" "0.1 - 157.4 (32.0)" "0.2 - 223.4 (16.2)"
[4] "0.0 - 146.5 (20.1)" "0.1 - 177.4 (18.2)" "0.2 - 130.2 (50.9)"
[7] "0.3 - 220.9 (15.7)" "0.3 - 194.3 (15.3)"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype4" "subtype5" "subtype1" "subtype4" "subtype4" "subtype1"
 [13] "subtype1" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
 [19] "subtype1" "subtype1" "subtype3" "subtype4" "subtype4" "subtype4"
 [25] "subtype6" "subtype1" "subtype3" "subtype7" "subtype7" "subtype5"
 [31] "subtype5" "subtype7" "subtype4" "subtype4" "subtype2" "subtype1"
 [37] "subtype4" "subtype1" "subtype7" "subtype5" "subtype7" "subtype7"
 [43] "subtype2" "subtype6" "subtype5" "subtype2" "subtype5" "subtype5"
 [49] "subtype3" "subtype2" "subtype3" "subtype4" "subtype1" "subtype2"
 [55] "subtype4" "subtype4" "subtype1" "subtype8" "subtype1" "subtype4"
 [61] "subtype1" "subtype5" "subtype5" "subtype7" "subtype3" "subtype2"
 [67] "subtype7" "subtype7" "subtype1" "subtype7" "subtype4" "subtype5"
 [73] "subtype7" "subtype1" "subtype2" "subtype2" "subtype1" "subtype5"
 [79] "subtype5" "subtype5" "subtype5" "subtype8" "subtype2" "subtype1"
 [85] "subtype5" "subtype2" "subtype2" "subtype2" "subtype5" "subtype7"
 [91] "subtype6" "subtype5" "subtype1" "subtype2" "subtype7" "subtype5"
 [97] "subtype1" "subtype2" "subtype7" "subtype3" "subtype5" "subtype1"
[103] "subtype7" "subtype1" "subtype1" "subtype5" "subtype7" "subtype7"
[109] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[115] "subtype1" "subtype5" "subtype1" "subtype7" "subtype5" "subtype3"
[121] "subtype4" "subtype4" "subtype7" "subtype4" "subtype5" "subtype7"
[127] "subtype5" "subtype4" "subtype4" "subtype5" "subtype4" "subtype1"
[133] "subtype4" "subtype3" "subtype3" "subtype4" "subtype8" "subtype5"
[139] "subtype1" "subtype5" "subtype1" "subtype7" "subtype1" "subtype5"
[145] "subtype5" "subtype4" "subtype5" "subtype5" "subtype4" "subtype7"
[151] "subtype5" "subtype5" "subtype5" "subtype4" "subtype4" "subtype2"
[157] "subtype4" "subtype1" "subtype7" "subtype3" "subtype1" "subtype3"
[163] "subtype5" "subtype3" "subtype3" "subtype7" "subtype3" "subtype7"
[169] "subtype2" "subtype3" "subtype3" "subtype5" "subtype4" "subtype5"
[175] "subtype5" "subtype4" "subtype5" "subtype5" "subtype7" "subtype7"
[181] "subtype4" "subtype4" "subtype7" "subtype3" "subtype2" "subtype2"
[187] "subtype4" "subtype3" "subtype3" "subtype7" "subtype4" "subtype3"
[193] "subtype3" "subtype4" "subtype3" "subtype1" "subtype5" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype8" "subtype1" "subtype7"
[205] "subtype7" "subtype5" "subtype3" "subtype5" "subtype7" "subtype7"
[211] "subtype5" "subtype4" "subtype1" "subtype4" "subtype5" "subtype1"
[217] "subtype1" "subtype1" "subtype1" "subtype5" "subtype7" "subtype1"
[223] "subtype7" "subtype1" "subtype8" "subtype2" "subtype4" "subtype4"
[229] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype8"
[235] "subtype3" "subtype3" "subtype7" "subtype7" "subtype3" "subtype5"
[241] "subtype1" "subtype7" "subtype3" "subtype4" "subtype2" "subtype4"
[247] "subtype6" "subtype5" "subtype2" "subtype5" "subtype1" "subtype5"
[253] "subtype4" "subtype5" "subtype1" "subtype8" "subtype1" "subtype5"
[259] "subtype7" "subtype8" "subtype4" "subtype6" "subtype4" "subtype4"
[265] "subtype8" "subtype5" "subtype5" "subtype7" "subtype1" "subtype4"
[271] "subtype1" "subtype7" "subtype5" "subtype1" "subtype1" "subtype2"
[277] "subtype7" "subtype2" "subtype4" "subtype2" "subtype1" "subtype2"
[283] "subtype5" "subtype2" "subtype5" "subtype5" "subtype1" "subtype5"
[289] "subtype5" "subtype5" "subtype1" "subtype4" "subtype4" "subtype7"
[295] "subtype7" "subtype1" "subtype5" "subtype7" "subtype1" "subtype6"
[301] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[307] "subtype1" "subtype5" "subtype5" "subtype1" "subtype1" "subtype1"
[313] "subtype1" "subtype2" "subtype2" "subtype7" "subtype1" "subtype7"
[319] "subtype1" "subtype1" "subtype7" "subtype5" "subtype7" "subtype6"
[325] "subtype2" "subtype1" "subtype5" "subtype3" "subtype5" "subtype7"
[331] "subtype3" "subtype7" "subtype3" "subtype1" "subtype5" "subtype3"
[337] "subtype2" "subtype4" "subtype3" "subtype2" "subtype7" "subtype7"
[343] "subtype4" "subtype1" "subtype5" "subtype4" "subtype3" "subtype1"
[349] "subtype7" "subtype2" "subtype3" "subtype3" "subtype3" "subtype8"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype7"
[361] "subtype1" "subtype4" "subtype4" "subtype7" "subtype7" "subtype7"
[367] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype5"
[373] "subtype5" "subtype5" "subtype7" "subtype1" "subtype1" "subtype5"
[379] "subtype3" "subtype3" "subtype5" "subtype5" "subtype3" "subtype7"
[385] "subtype7" "subtype2" "subtype4" "subtype1" "subtype1" "subtype2"
[391] "subtype3" "subtype5" "subtype5" "subtype4" "subtype1" "subtype2"
[397] "subtype7" "subtype7" "subtype1" "subtype7" "subtype5" "subtype8"
[403] "subtype5" "subtype1" "subtype7" "subtype4" "subtype7" "subtype5"
[409] "subtype1" "subtype4" "subtype8" "subtype2" "subtype7" "subtype3"
[415] "subtype1" "subtype5" "subtype3" "subtype4" "subtype5" "subtype4"
[421] "subtype2" "subtype7" "subtype3" "subtype1" "subtype7" "subtype1"
[427] "subtype2" "subtype8" "subtype8" "subtype7" "subtype4" "subtype7"
[433] "subtype3" "subtype7" "subtype1" "subtype4" "subtype4" "subtype4"
[439] "subtype8" "subtype5" "subtype5" "subtype2" "subtype2" "subtype7"
[445] "subtype2" "subtype2" "subtype1" "subtype7" "subtype7" "subtype8"
[451] "subtype7" "subtype3" "subtype8" "subtype4" "subtype4" "subtype1"
[457] "subtype7" "subtype5" "subtype1" "subtype3" "subtype2" "subtype7"
[463] "subtype7" "subtype4" "subtype5" "subtype3" "subtype5" "subtype5"
[469] "subtype2" "subtype2" "subtype3" "subtype3" "subtype7" "subtype5"
[475] "subtype5" "subtype7" "subtype7" "subtype8" "subtype7" "subtype7"
[481] "subtype2" "subtype7" "subtype5" "subtype5" "subtype4" "subtype1"
[487] "subtype7" "subtype3" "subtype3" "subtype3" "subtype1" "subtype8"
[493] "subtype1" "subtype3" "subtype4" "subtype4" "subtype5" "subtype3"
[499] "subtype5" "subtype4" "subtype1" "subtype4" "subtype7" "subtype1"
[505] "subtype4" "subtype1" "subtype4" "subtype3" "subtype5" "subtype7"
[511] "subtype7" "subtype4" "subtype5" "subtype4" "subtype4" "subtype1"
[517] "subtype4" "subtype3" "subtype1" "subtype5" "subtype2" "subtype1"
[523] "subtype7" "subtype3" "subtype5" "subtype2" "subtype7" "subtype7"
[529] "subtype5" "subtype1" "subtype5" "subtype4" "subtype2" "subtype4"
[535] "subtype4" "subtype5" "subtype4" "subtype6" "subtype7" "subtype4"
[541] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype6"
[547] "subtype5" "subtype7" "subtype3" "subtype4" "subtype4" "subtype5"
[553] "subtype5" "subtype4" "subtype4" "subtype4" "subtype5" "subtype1"
[559] "subtype5" "subtype4" "subtype5" "subtype3" "subtype1" "subtype1"
[565] "subtype2" "subtype7" "subtype1" "subtype4" "subtype4" "subtype4"
[571] "subtype5" "subtype3" "subtype7" "subtype4" "subtype4" "subtype3"
[577] "subtype7" "subtype4" "subtype4" "subtype1" "subtype1" "subtype4"
[583] "subtype3" "subtype7" "subtype7" "subtype8" "subtype5" "subtype7"
[589] "subtype7" "subtype7" "subtype5" "subtype3" "subtype3" "subtype7"
[595] "subtype5" "subtype5" "subtype5" "subtype4" "subtype1" "subtype6"
[601] "subtype3" "subtype7" "subtype1" "subtype7" "subtype3" "subtype1"
[607] "subtype7" "subtype7" "subtype1" "subtype3" "subtype5" "subtype5"
[613] "subtype3" "subtype3" "subtype4" "subtype7" "subtype1" "subtype8"
[619] "subtype1" "subtype2" "subtype7" "subtype3" "subtype1" "subtype4"
[625] "subtype7" "subtype5" "subtype3" "subtype2" "subtype5" "subtype5"
[631] "subtype5" "subtype8" "subtype5" "subtype5" "subtype7" "subtype4"
[637] "subtype7" "subtype3" "subtype1" "subtype7" "subtype4" "subtype2"
[643] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype1"
[649] "subtype1" "subtype3" "subtype1" "subtype4" "subtype3" "subtype7"
[655] "subtype5" "subtype7" "subtype1" "subtype1" "subtype5" "subtype3"
[661] "subtype7" "subtype2" "subtype7" "subtype2" "subtype7" "subtype7"
[667] "subtype7" "subtype7" "subtype8" "subtype5" "subtype7" "subtype5"
[673] "subtype5" "subtype1" "subtype4" "subtype2" "subtype7" "subtype8"
[679] "subtype8" "subtype7" "subtype5" "subtype7" "subtype5" "subtype3"
[685] "subtype1" "subtype2" "subtype7" "subtype7" "subtype3" "subtype2"
[691] "subtype7" "subtype7" "subtype5" "subtype7" "subtype3" "subtype5"
[697] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype7" "subtype5" "subtype7" "subtype5" "subtype3"
[709] "subtype5" "subtype5" "subtype1" "subtype3" "subtype7" "subtype5"
[715] "subtype4" "subtype1" "subtype3" "subtype4" "subtype7" "subtype1"
[721] "subtype1" "subtype5" "subtype5" "subtype4" "subtype7" "subtype7"
[727] "subtype5" "subtype5" "subtype8" "subtype5" "subtype2" "subtype3"
[733] "subtype7" "subtype5" "subtype2" "subtype7" "subtype3" "subtype5"
[739] "subtype6" "subtype1" "subtype5" "subtype5" "subtype3" "subtype5"
[745] "subtype7" "subtype1" "subtype7" "subtype3" "subtype1" "subtype1"
[751] "subtype5" "subtype1" "subtype4" "subtype5" "subtype7" "subtype2"
[757] "subtype2" "subtype1" "subtype4" "subtype5" "subtype2" "subtype5"
[763] "subtype5" "subtype1" "subtype7" "subtype8" "subtype4" "subtype5"
[769] "subtype4" "subtype1" "subtype4" "subtype2" "subtype5" "subtype8"
[775] "subtype7" "subtype7" "subtype5" "subtype7"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype4" "subtype5" "subtype1" "subtype4" "subtype4" "subtype1"
 [13] "subtype1" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
 [19] "subtype1" "subtype1" "subtype3" "subtype4" "subtype4" "subtype4"
 [25] "subtype6" "subtype1" "subtype3" "subtype7" "subtype7" "subtype5"
 [31] "subtype5" "subtype7" "subtype4" "subtype4" "subtype2" "subtype1"
 [37] "subtype4" "subtype1" "subtype7" "subtype5" "subtype7" "subtype7"
 [43] "subtype2" "subtype6" "subtype5" "subtype2" "subtype5" "subtype5"
 [49] "subtype3" "subtype2" "subtype3" "subtype4" "subtype1" "subtype2"
 [55] "subtype4" "subtype4" "subtype1" "subtype8" "subtype1" "subtype4"
 [61] "subtype1" "subtype5" "subtype5" "subtype7" "subtype3" "subtype2"
 [67] "subtype7" "subtype7" "subtype1" "subtype7" "subtype4" "subtype5"
 [73] "subtype7" "subtype1" "subtype2" "subtype2" "subtype1" "subtype5"
 [79] "subtype5" "subtype5" "subtype5" "subtype8" "subtype2" "subtype1"
 [85] "subtype5" "subtype2" "subtype2" "subtype2" "subtype5" "subtype7"
 [91] "subtype6" "subtype5" "subtype1" "subtype2" "subtype7" "subtype5"
 [97] "subtype1" "subtype2" "subtype7" "subtype3" "subtype5" "subtype1"
[103] "subtype7" "subtype1" "subtype1" "subtype5" "subtype7" "subtype7"
[109] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[115] "subtype1" "subtype5" "subtype1" "subtype7" "subtype5" "subtype3"
[121] "subtype4" "subtype4" "subtype7" "subtype4" "subtype5" "subtype7"
[127] "subtype5" "subtype4" "subtype4" "subtype5" "subtype4" "subtype1"
[133] "subtype4" "subtype3" "subtype3" "subtype4" "subtype8" "subtype5"
[139] "subtype1" "subtype5" "subtype1" "subtype7" "subtype1" "subtype5"
[145] "subtype5" "subtype4" "subtype5" "subtype5" "subtype4" "subtype7"
[151] "subtype5" "subtype5" "subtype5" "subtype4" "subtype4" "subtype2"
[157] "subtype4" "subtype1" "subtype7" "subtype3" "subtype1" "subtype3"
[163] "subtype5" "subtype3" "subtype3" "subtype7" "subtype3" "subtype7"
[169] "subtype2" "subtype3" "subtype3" "subtype5" "subtype4" "subtype5"
[175] "subtype5" "subtype4" "subtype5" "subtype5" "subtype7" "subtype7"
[181] "subtype4" "subtype4" "subtype7" "subtype3" "subtype2" "subtype2"
[187] "subtype4" "subtype3" "subtype3" "subtype7" "subtype4" "subtype3"
[193] "subtype3" "subtype4" "subtype3" "subtype1" "subtype5" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype8" "subtype1" "subtype7"
[205] "subtype7" "subtype5" "subtype3" "subtype5" "subtype7" "subtype7"
[211] "subtype5" "subtype4" "subtype1" "subtype4" "subtype5" "subtype1"
[217] "subtype1" "subtype1" "subtype1" "subtype5" "subtype7" "subtype1"
[223] "subtype7" "subtype1" "subtype8" "subtype2" "subtype4" "subtype4"
[229] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype8"
[235] "subtype3" "subtype3" "subtype7" "subtype7" "subtype3" "subtype5"
[241] "subtype1" "subtype7" "subtype3" "subtype4" "subtype2" "subtype4"
[247] "subtype6" "subtype5" "subtype2" "subtype5" "subtype1" "subtype5"
[253] "subtype4" "subtype5" "subtype1" "subtype8" "subtype1" "subtype5"
[259] "subtype7" "subtype8" "subtype4" "subtype6" "subtype4" "subtype4"
[265] "subtype8" "subtype5" "subtype5" "subtype7" "subtype1" "subtype4"
[271] "subtype1" "subtype7" "subtype5" "subtype1" "subtype1" "subtype2"
[277] "subtype7" "subtype2" "subtype4" "subtype2" "subtype1" "subtype2"
[283] "subtype5" "subtype2" "subtype5" "subtype5" "subtype1" "subtype5"
[289] "subtype5" "subtype5" "subtype1" "subtype4" "subtype4" "subtype7"
[295] "subtype7" "subtype1" "subtype5" "subtype7" "subtype1" "subtype6"
[301] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[307] "subtype1" "subtype5" "subtype5" "subtype1" "subtype1" "subtype1"
[313] "subtype1" "subtype2" "subtype2" "subtype7" "subtype1" "subtype7"
[319] "subtype1" "subtype1" "subtype7" "subtype5" "subtype7" "subtype6"
[325] "subtype2" "subtype1" "subtype5" "subtype3" "subtype5" "subtype7"
[331] "subtype3" "subtype7" "subtype3" "subtype1" "subtype5" "subtype3"
[337] "subtype2" "subtype4" "subtype3" "subtype2" "subtype7" "subtype7"
[343] "subtype4" "subtype1" "subtype5" "subtype4" "subtype3" "subtype1"
[349] "subtype7" "subtype2" "subtype3" "subtype3" "subtype3" "subtype8"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype7"
[361] "subtype1" "subtype4" "subtype4" "subtype7" "subtype7" "subtype7"
[367] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype5"
[373] "subtype5" "subtype5" "subtype7" "subtype1" "subtype1" "subtype5"
[379] "subtype3" "subtype3" "subtype5" "subtype5" "subtype3" "subtype7"
[385] "subtype7" "subtype2" "subtype4" "subtype1" "subtype1" "subtype2"
[391] "subtype3" "subtype5" "subtype5" "subtype4" "subtype1" "subtype2"
[397] "subtype7" "subtype7" "subtype1" "subtype7" "subtype5" "subtype8"
[403] "subtype5" "subtype1" "subtype7" "subtype4" "subtype7" "subtype5"
[409] "subtype1" "subtype4" "subtype8" "subtype2" "subtype7" "subtype3"
[415] "subtype1" "subtype5" "subtype3" "subtype4" "subtype5" "subtype4"
[421] "subtype2" "subtype7" "subtype3" "subtype1" "subtype7" "subtype1"
[427] "subtype2" "subtype8" "subtype8" "subtype7" "subtype4" "subtype7"
[433] "subtype3" "subtype7" "subtype1" "subtype4" "subtype4" "subtype4"
[439] "subtype8" "subtype5" "subtype5" "subtype2" "subtype2" "subtype7"
[445] "subtype2" "subtype2" "subtype1" "subtype7" "subtype7" "subtype8"
[451] "subtype7" "subtype3" "subtype8" "subtype4" "subtype4" "subtype1"
[457] "subtype7" "subtype5" "subtype1" "subtype3" "subtype2" "subtype7"
[463] "subtype7" "subtype4" "subtype5" "subtype3" "subtype5" "subtype5"
[469] "subtype2" "subtype2" "subtype3" "subtype3" "subtype7" "subtype5"
[475] "subtype5" "subtype7" "subtype7" "subtype8" "subtype7" "subtype7"
[481] "subtype2" "subtype7" "subtype5" "subtype5" "subtype4" "subtype1"
[487] "subtype7" "subtype3" "subtype3" "subtype3" "subtype1" "subtype8"
[493] "subtype1" "subtype3" "subtype4" "subtype4" "subtype5" "subtype3"
[499] "subtype5" "subtype4" "subtype1" "subtype4" "subtype7" "subtype1"
[505] "subtype4" "subtype1" "subtype4" "subtype3" "subtype5" "subtype7"
[511] "subtype7" "subtype4" "subtype5" "subtype4" "subtype4" "subtype1"
[517] "subtype4" "subtype3" "subtype1" "subtype5" "subtype2" "subtype1"
[523] "subtype7" "subtype3" "subtype5" "subtype2" "subtype7" "subtype7"
[529] "subtype5" "subtype1" "subtype5" "subtype4" "subtype2" "subtype4"
[535] "subtype4" "subtype5" "subtype4" "subtype6" "subtype7" "subtype4"
[541] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype6"
[547] "subtype5" "subtype7" "subtype3" "subtype4" "subtype4" "subtype5"
[553] "subtype5" "subtype4" "subtype4" "subtype4" "subtype5" "subtype1"
[559] "subtype5" "subtype4" "subtype5" "subtype3" "subtype1" "subtype1"
[565] "subtype2" "subtype7" "subtype1" "subtype4" "subtype4" "subtype4"
[571] "subtype5" "subtype3" "subtype7" "subtype4" "subtype4" "subtype3"
[577] "subtype7" "subtype4" "subtype4" "subtype1" "subtype1" "subtype4"
[583] "subtype3" "subtype7" "subtype7" "subtype8" "subtype5" "subtype7"
[589] "subtype7" "subtype7" "subtype5" "subtype3" "subtype3" "subtype7"
[595] "subtype5" "subtype5" "subtype5" "subtype4" "subtype1" "subtype6"
[601] "subtype3" "subtype7" "subtype1" "subtype7" "subtype3" "subtype1"
[607] "subtype7" "subtype7" "subtype1" "subtype3" "subtype5" "subtype5"
[613] "subtype3" "subtype3" "subtype4" "subtype7" "subtype1" "subtype8"
[619] "subtype1" "subtype2" "subtype7" "subtype3" "subtype1" "subtype4"
[625] "subtype7" "subtype5" "subtype3" "subtype2" "subtype5" "subtype5"
[631] "subtype5" "subtype8" "subtype5" "subtype5" "subtype7" "subtype4"
[637] "subtype7" "subtype3" "subtype1" "subtype7" "subtype4" "subtype2"
[643] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype1"
[649] "subtype1" "subtype3" "subtype1" "subtype4" "subtype3" "subtype7"
[655] "subtype5" "subtype7" "subtype1" "subtype1" "subtype5" "subtype3"
[661] "subtype7" "subtype2" "subtype7" "subtype2" "subtype7" "subtype7"
[667] "subtype7" "subtype7" "subtype8" "subtype5" "subtype7" "subtype5"
[673] "subtype5" "subtype1" "subtype4" "subtype2" "subtype7" "subtype8"
[679] "subtype8" "subtype7" "subtype5" "subtype7" "subtype5" "subtype3"
[685] "subtype1" "subtype2" "subtype7" "subtype7" "subtype3" "subtype2"
[691] "subtype7" "subtype7" "subtype5" "subtype7" "subtype3" "subtype5"
[697] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype7" "subtype5" "subtype7" "subtype5" "subtype3"
[709] "subtype5" "subtype5" "subtype1" "subtype3" "subtype7" "subtype5"
[715] "subtype4" "subtype1" "subtype3" "subtype4" "subtype7" "subtype1"
[721] "subtype1" "subtype5" "subtype5" "subtype4" "subtype7" "subtype7"
[727] "subtype5" "subtype5" "subtype8" "subtype5" "subtype2" "subtype3"
[733] "subtype7" "subtype5" "subtype2" "subtype7" "subtype3" "subtype5"
[739] "subtype6" "subtype1" "subtype5" "subtype5" "subtype3" "subtype5"
[745] "subtype7" "subtype1" "subtype7" "subtype3" "subtype1" "subtype1"
[751] "subtype5" "subtype1" "subtype4" "subtype5" "subtype7" "subtype2"
[757] "subtype2" "subtype1" "subtype4" "subtype5" "subtype2" "subtype5"
[763] "subtype5" "subtype1" "subtype7" "subtype8" "subtype4" "subtype5"
[769] "subtype4" "subtype1" "subtype4" "subtype2" "subtype5" "subtype8"
[775] "subtype7" "subtype7" "subtype5" "subtype7"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype4" "subtype5" "subtype1" "subtype4" "subtype4" "subtype1"
 [13] "subtype1" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
 [19] "subtype1" "subtype1" "subtype3" "subtype4" "subtype4" "subtype4"
 [25] "subtype6" "subtype1" "subtype3" "subtype7" "subtype7" "subtype5"
 [31] "subtype5" "subtype7" "subtype4" "subtype4" "subtype2" "subtype1"
 [37] "subtype4" "subtype1" "subtype7" "subtype5" "subtype7" "subtype7"
 [43] "subtype2" "subtype6" "subtype5" "subtype2" "subtype5" "subtype5"
 [49] "subtype3" "subtype2" "subtype3" "subtype4" "subtype1" "subtype2"
 [55] "subtype4" "subtype4" "subtype1" "subtype8" "subtype1" "subtype4"
 [61] "subtype1" "subtype5" "subtype5" "subtype7" "subtype3" "subtype2"
 [67] "subtype7" "subtype7" "subtype1" "subtype7" "subtype4" "subtype5"
 [73] "subtype7" "subtype1" "subtype2" "subtype2" "subtype1" "subtype5"
 [79] "subtype5" "subtype5" "subtype5" "subtype8" "subtype2" "subtype1"
 [85] "subtype5" "subtype2" "subtype2" "subtype2" "subtype5" "subtype7"
 [91] "subtype6" "subtype5" "subtype1" "subtype2" "subtype7" "subtype5"
 [97] "subtype1" "subtype2" "subtype7" "subtype3" "subtype5" "subtype1"
[103] "subtype7" "subtype1" "subtype1" "subtype5" "subtype7" "subtype7"
[109] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[115] "subtype1" "subtype5" "subtype1" "subtype7" "subtype5" "subtype3"
[121] "subtype4" "subtype4" "subtype7" "subtype4" "subtype5" "subtype7"
[127] "subtype5" "subtype4" "subtype4" "subtype5" "subtype4" "subtype1"
[133] "subtype4" "subtype3" "subtype3" "subtype4" "subtype8" "subtype5"
[139] "subtype1" "subtype5" "subtype1" "subtype7" "subtype1" "subtype5"
[145] "subtype5" "subtype4" "subtype5" "subtype5" "subtype4" "subtype7"
[151] "subtype5" "subtype5" "subtype5" "subtype4" "subtype4" "subtype2"
[157] "subtype4" "subtype1" "subtype7" "subtype3" "subtype1" "subtype3"
[163] "subtype5" "subtype3" "subtype3" "subtype7" "subtype3" "subtype7"
[169] "subtype2" "subtype3" "subtype3" "subtype5" "subtype4" "subtype5"
[175] "subtype5" "subtype4" "subtype5" "subtype5" "subtype7" "subtype7"
[181] "subtype4" "subtype4" "subtype7" "subtype3" "subtype2" "subtype2"
[187] "subtype4" "subtype3" "subtype3" "subtype7" "subtype4" "subtype3"
[193] "subtype3" "subtype4" "subtype3" "subtype1" "subtype5" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype8" "subtype1" "subtype7"
[205] "subtype7" "subtype5" "subtype3" "subtype5" "subtype7" "subtype7"
[211] "subtype5" "subtype4" "subtype1" "subtype4" "subtype5" "subtype1"
[217] "subtype1" "subtype1" "subtype1" "subtype5" "subtype7" "subtype1"
[223] "subtype7" "subtype1" "subtype8" "subtype2" "subtype4" "subtype4"
[229] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype8"
[235] "subtype3" "subtype3" "subtype7" "subtype7" "subtype3" "subtype5"
[241] "subtype1" "subtype7" "subtype3" "subtype4" "subtype2" "subtype4"
[247] "subtype6" "subtype5" "subtype2" "subtype5" "subtype1" "subtype5"
[253] "subtype4" "subtype5" "subtype1" "subtype8" "subtype1" "subtype5"
[259] "subtype7" "subtype8" "subtype4" "subtype6" "subtype4" "subtype4"
[265] "subtype8" "subtype5" "subtype5" "subtype7" "subtype1" "subtype4"
[271] "subtype1" "subtype7" "subtype5" "subtype1" "subtype1" "subtype2"
[277] "subtype7" "subtype2" "subtype4" "subtype2" "subtype1" "subtype2"
[283] "subtype5" "subtype2" "subtype5" "subtype5" "subtype1" "subtype5"
[289] "subtype5" "subtype5" "subtype1" "subtype4" "subtype4" "subtype7"
[295] "subtype7" "subtype1" "subtype5" "subtype7" "subtype1" "subtype6"
[301] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[307] "subtype1" "subtype5" "subtype5" "subtype1" "subtype1" "subtype1"
[313] "subtype1" "subtype2" "subtype2" "subtype7" "subtype1" "subtype7"
[319] "subtype1" "subtype1" "subtype7" "subtype5" "subtype7" "subtype6"
[325] "subtype2" "subtype1" "subtype5" "subtype3" "subtype5" "subtype7"
[331] "subtype3" "subtype7" "subtype3" "subtype1" "subtype5" "subtype3"
[337] "subtype2" "subtype4" "subtype3" "subtype2" "subtype7" "subtype7"
[343] "subtype4" "subtype1" "subtype5" "subtype4" "subtype3" "subtype1"
[349] "subtype7" "subtype2" "subtype3" "subtype3" "subtype3" "subtype8"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype7"
[361] "subtype1" "subtype4" "subtype4" "subtype7" "subtype7" "subtype7"
[367] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype5"
[373] "subtype5" "subtype5" "subtype7" "subtype1" "subtype1" "subtype5"
[379] "subtype3" "subtype3" "subtype5" "subtype5" "subtype3" "subtype7"
[385] "subtype7" "subtype2" "subtype4" "subtype1" "subtype1" "subtype2"
[391] "subtype3" "subtype5" "subtype5" "subtype4" "subtype1" "subtype2"
[397] "subtype7" "subtype7" "subtype1" "subtype7" "subtype5" "subtype8"
[403] "subtype5" "subtype1" "subtype7" "subtype4" "subtype7" "subtype5"
[409] "subtype1" "subtype4" "subtype8" "subtype2" "subtype7" "subtype3"
[415] "subtype1" "subtype5" "subtype3" "subtype4" "subtype5" "subtype4"
[421] "subtype2" "subtype7" "subtype3" "subtype1" "subtype7" "subtype1"
[427] "subtype2" "subtype8" "subtype8" "subtype7" "subtype4" "subtype7"
[433] "subtype3" "subtype7" "subtype1" "subtype4" "subtype4" "subtype4"
[439] "subtype8" "subtype5" "subtype5" "subtype2" "subtype2" "subtype7"
[445] "subtype2" "subtype2" "subtype1" "subtype7" "subtype7" "subtype8"
[451] "subtype7" "subtype3" "subtype8" "subtype4" "subtype4" "subtype1"
[457] "subtype7" "subtype5" "subtype1" "subtype3" "subtype2" "subtype7"
[463] "subtype7" "subtype4" "subtype5" "subtype3" "subtype5" "subtype5"
[469] "subtype2" "subtype2" "subtype3" "subtype3" "subtype7" "subtype5"
[475] "subtype5" "subtype7" "subtype7" "subtype8" "subtype7" "subtype7"
[481] "subtype2" "subtype7" "subtype5" "subtype5" "subtype4" "subtype1"
[487] "subtype7" "subtype3" "subtype3" "subtype3" "subtype1" "subtype8"
[493] "subtype1" "subtype3" "subtype4" "subtype4" "subtype5" "subtype3"
[499] "subtype5" "subtype4" "subtype1" "subtype4" "subtype7" "subtype1"
[505] "subtype4" "subtype1" "subtype4" "subtype3" "subtype5" "subtype7"
[511] "subtype7" "subtype4" "subtype5" "subtype4" "subtype4" "subtype1"
[517] "subtype4" "subtype3" "subtype1" "subtype5" "subtype2" "subtype1"
[523] "subtype7" "subtype3" "subtype5" "subtype2" "subtype7" "subtype7"
[529] "subtype5" "subtype1" "subtype5" "subtype4" "subtype2" "subtype4"
[535] "subtype4" "subtype5" "subtype4" "subtype6" "subtype7" "subtype4"
[541] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype6"
[547] "subtype5" "subtype7" "subtype3" "subtype4" "subtype4" "subtype5"
[553] "subtype5" "subtype4" "subtype4" "subtype4" "subtype5" "subtype1"
[559] "subtype5" "subtype4" "subtype5" "subtype3" "subtype1" "subtype1"
[565] "subtype2" "subtype7" "subtype1" "subtype4" "subtype4" "subtype4"
[571] "subtype5" "subtype3" "subtype7" "subtype4" "subtype4" "subtype3"
[577] "subtype7" "subtype4" "subtype4" "subtype1" "subtype1" "subtype4"
[583] "subtype3" "subtype7" "subtype7" "subtype8" "subtype5" "subtype7"
[589] "subtype7" "subtype7" "subtype5" "subtype3" "subtype3" "subtype7"
[595] "subtype5" "subtype5" "subtype5" "subtype4" "subtype1" "subtype6"
[601] "subtype3" "subtype7" "subtype1" "subtype7" "subtype3" "subtype1"
[607] "subtype7" "subtype7" "subtype1" "subtype3" "subtype5" "subtype5"
[613] "subtype3" "subtype3" "subtype4" "subtype7" "subtype1" "subtype8"
[619] "subtype1" "subtype2" "subtype7" "subtype3" "subtype1" "subtype4"
[625] "subtype7" "subtype5" "subtype3" "subtype2" "subtype5" "subtype5"
[631] "subtype5" "subtype8" "subtype5" "subtype5" "subtype7" "subtype4"
[637] "subtype7" "subtype3" "subtype1" "subtype7" "subtype4" "subtype2"
[643] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype1"
[649] "subtype1" "subtype3" "subtype1" "subtype4" "subtype3" "subtype7"
[655] "subtype5" "subtype7" "subtype1" "subtype1" "subtype5" "subtype3"
[661] "subtype7" "subtype2" "subtype7" "subtype2" "subtype7" "subtype7"
[667] "subtype7" "subtype7" "subtype8" "subtype5" "subtype7" "subtype5"
[673] "subtype5" "subtype1" "subtype4" "subtype2" "subtype7" "subtype8"
[679] "subtype8" "subtype7" "subtype5" "subtype7" "subtype5" "subtype3"
[685] "subtype1" "subtype2" "subtype7" "subtype7" "subtype3" "subtype2"
[691] "subtype7" "subtype7" "subtype5" "subtype7" "subtype3" "subtype5"
[697] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype7" "subtype5" "subtype7" "subtype5" "subtype3"
[709] "subtype5" "subtype5" "subtype1" "subtype3" "subtype7" "subtype5"
[715] "subtype4" "subtype1" "subtype3" "subtype4" "subtype7" "subtype1"
[721] "subtype1" "subtype5" "subtype5" "subtype4" "subtype7" "subtype7"
[727] "subtype5" "subtype5" "subtype8" "subtype5" "subtype2" "subtype3"
[733] "subtype7" "subtype5" "subtype2" "subtype7" "subtype3" "subtype5"
[739] "subtype6" "subtype1" "subtype5" "subtype5" "subtype3" "subtype5"
[745] "subtype7" "subtype1" "subtype7" "subtype3" "subtype1" "subtype1"
[751] "subtype5" "subtype1" "subtype4" "subtype5" "subtype7" "subtype2"
[757] "subtype2" "subtype1" "subtype4" "subtype5" "subtype2" "subtype5"
[763] "subtype5" "subtype1" "subtype7" "subtype8" "subtype4" "subtype5"
[769] "subtype4" "subtype1" "subtype4" "subtype2" "subtype5" "subtype8"
[775] "subtype7" "subtype7" "subtype5" "subtype7"
D7V2, continuous
D7V3, binary
          cls
clus         0   1
  subtype1 150   0
  subtype2  81   0
  subtype3  99   1
  subtype4 130   1
  subtype5 173   6
  subtype6  12   0
  subtype7 150   1
  subtype8  31   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  150    0
  subtype2   81    0
  subtype3   99    1
  subtype4  130    1
  subtype5  173    6
  subtype6   12    0
  subtype7  150    1
  subtype8   31    0
D7V4, binary
          cls
clus         0   1
  subtype1  46 104
  subtype2  19  62
  subtype3  21  79
  subtype4  26 105
  subtype5  44 135
  subtype6   4   8
  subtype7  42 109
  subtype8   7  24
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   46  104
  subtype2   19   62
  subtype3   21   79
  subtype4   26  105
  subtype5   44  135
  subtype6    4    8
  subtype7   42  109
  subtype8    7   24
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 138   3   9
  subtype2        1  71   2   7
  subtype3        1  89   1   9
  subtype4        0 115   5  11
  subtype5        0 163   1  15
  subtype6        0  10   0   2
  subtype7        0 133   2  16
  subtype8        0  28   1   2
D7V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 62       4      29         0 16  12   5   1    1  7   6  1   4   1
  subtype2 17       8      13         0  7  14   5   0    3  2   3  3   5   0
  subtype3 30       1      16         0 12  18   1   0    3  7   6  1   3   0
  subtype4 26       1      13         0 21  19   7   0    2 12  12  5   8   0
  subtype5 34       3      30         0 30  27   7   0    7 14  14  3   5   0
  subtype6  4       0       3         0  0   1   0   0    1  1   1  0   1   0
  subtype7 53       5      21         1  9  30   6   1    5  7   6  3   3   0
  subtype8 14       0       4         0  5   3   1   0    0  0   2  1   0   0
          vv
clus       N3C NX
  subtype1   1  0
  subtype2   0  1
  subtype3   0  2
  subtype4   0  5
  subtype5   0  5
  subtype6   0  0
  subtype7   0  1
  subtype8   0  1
D7V6, multiclass
D7V7, continuous
D7V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      11       11        0        1        72        28         0
  subtype2       8        5        1        3        24        20         1
  subtype3       9       11        0        2        34        20         1
  subtype4       8        3        0        1        36        34         0
  subtype5      10       10        5        0        54        46         0
  subtype6       1        1        0        0         5         2         0
  subtype7      18       20        0        0        52        31         0
  subtype8       4        2        1        1        12         5         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         14          1          6        3         0       2
  subtype2          9          0          6        2         1       1
  subtype3         13          3          3        1         0       3
  subtype4         25          4         10        5         0       5
  subtype5         33         11          7        1         0       2
  subtype6          2          0          1        0         0       0
  subtype7         18          4          3        2         0       3
  subtype8          3          0          1        1         0       1
D7V9, multiclass

Clustering(8) Variable = MRNASEQ_CHIERARCHICAL
D8V1, survival
          sevent
clus2        0   1
  subtype1 264  42
  subtype2 163  30
  subtype3 257  22
subtype1 subtype2 subtype3 
     306      193      279 
subtype1 subtype2 subtype3 
      42       30       22 
$subtype1
TCGA-A1-A0SG TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04R 
       14.24         7.96        39.32        18.18       103.66        77.72 
TCGA-A2-A04V TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CU TCGA-A2-A0CW TCGA-A2-A0D4 
       63.12        78.64        75.55         5.16        57.53        16.31 
TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EY TCGA-A2-A0SV TCGA-A2-A0YC TCGA-A2-A0YF 
       62.53        26.53        15.95        27.12        21.14         9.50 
TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A2-A1FX TCGA-A2-A25B TCGA-A2-A25C 
       13.28        12.46        23.77        30.74         8.48         9.37 
TCGA-A2-A25E TCGA-A7-A0CD TCGA-A7-A0CJ TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A3IY 
       82.55         5.59         6.18         6.44         6.84         4.96 
TCGA-A7-A3IZ TCGA-A7-A3J0 TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06R 
        4.87         2.50        13.02        13.02         1.02        17.95 
TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 
       41.06        29.00        31.00        26.01         1.02        17.00 
TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07F TCGA-A8-A07G TCGA-A8-A07I 
       53.95         9.01        33.01        18.94        18.94        14.01 
TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07W TCGA-A8-A082 TCGA-A8-A084 
       17.00        10.98         7.96         9.99        18.05        15.06 
TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08B TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G 
       36.95        13.02        23.08        19.96        18.05        19.92 
TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08P TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08Z 
       12.00        37.05        30.97        19.07        93.04        40.01 
TCGA-A8-A091 TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A099 TCGA-A8-A09C TCGA-A8-A09I 
       19.07        16.01        17.92         9.99         1.02        33.07 
TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09T 
       29.95        15.02         1.02        25.02         8.98        19.00 
TCGA-A8-A09W TCGA-A8-A0A9 TCGA-A8-A0AD TCGA-AC-A23E TCGA-AC-A2BM TCGA-AN-A03X 
        0.99        13.02        38.04         2.37        38.20         0.33 
TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0AK 
        0.33         0.23         0.62         2.93         7.99         7.33 
TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FY 
        0.30         6.41         4.60         6.97         6.02         0.33 
TCGA-AN-A0FZ TCGA-AN-A0XN TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XW TCGA-AO-A03L 
        0.33         0.33         0.30         0.33         5.59        80.28 
TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0J8 
       54.08        81.63        84.69         9.93         8.55         9.11 
TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A12B TCGA-AO-A12C 
       38.53        60.03        99.22        93.70        77.56        65.52 
TCGA-AO-A12H TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H 
       28.34        82.62        49.94         0.53        17.79        14.43 
TCGA-AQ-A1H2 TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0TZ 
        7.56         5.26        29.72        24.30        55.86        43.17 
TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AS TCGA-AR-A1AV TCGA-AR-A24H TCGA-AR-A24K 
       83.87        74.40        40.83        42.58       109.58        50.89 
TCGA-AR-A24L TCGA-AR-A24R TCGA-AR-A24V TCGA-AR-A24Z TCGA-AR-A250 TCGA-AR-A2LK 
       73.02        57.37        54.18        51.75        56.12        42.84 
TCGA-AR-A2LL TCGA-B6-A0I8 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IG 
        7.33        24.62       220.87       129.57        50.70       146.50 
TCGA-B6-A0IM TCGA-B6-A0IO TCGA-B6-A0RH TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM 
      126.12       110.14       188.98       223.40        81.17        78.02 
TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WZ 
      162.02       102.77       177.40        79.63        17.95       129.57 
TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-B6-A1KN TCGA-BH-A0B4 TCGA-BH-A0BT 
       28.24        68.94        43.59       109.48        39.16        45.57 
TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C1 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DZ 
       49.94        49.05        43.99        42.90        45.80        16.27 
TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0EI TCGA-BH-A0H0 TCGA-BH-A0H6 
       15.68        44.78        24.49        24.43        15.16        24.56 
TCGA-BH-A0H7 TCGA-BH-A0HI TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0W3 TCGA-BH-A18J 
       23.05        20.35        12.89        51.29         5.92        20.09 
TCGA-BH-A18K TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-BH-A18U 
       90.81        26.66        37.74        30.28        66.05        51.39 
TCGA-BH-A1ES TCGA-BH-A1EV TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F8 
      113.82        12.00        17.69        31.53        89.16        24.62 
TCGA-BH-A1FD TCGA-BH-A1FG TCGA-BH-A1FJ TCGA-BH-A1FM TCGA-BH-A1FN TCGA-BH-A1FR 
       33.14       122.89        63.35        45.63        72.07       144.59 
TCGA-BH-A202 TCGA-BH-A204 TCGA-C8-A138 TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN 
        0.72        83.31         0.23         0.07         0.20         0.07 
TCGA-C8-A26V TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A274 TCGA-C8-A27A TCGA-D8-A140 
        0.30         0.13         0.20         0.03        12.20         0.89 
TCGA-D8-A1J8 TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JI TCGA-D8-A1JJ 
        8.42         5.85         8.98         1.87         0.69         9.01 
TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1X5 TCGA-D8-A1X6 
        7.13         5.49         3.45         4.04         5.62         7.76 
TCGA-D8-A1X7 TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XF 
        2.79        12.49         9.01         2.66         5.10         6.48 
TCGA-D8-A1XG TCGA-D8-A1XJ TCGA-D8-A1XL TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS 
        6.44        11.57        10.49         7.96         5.52         1.64 
TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XY TCGA-D8-A1XZ TCGA-D8-A1Y1 TCGA-D8-A1Y3 
        4.90         4.80         2.66         3.95         3.78         4.08 
TCGA-D8-A27E TCGA-D8-A27G TCGA-D8-A27N TCGA-D8-A27R TCGA-D8-A27W TCGA-E2-A105 
        5.98         6.87         4.77         2.96         0.49        38.24 
TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E 
       51.12        38.53        11.57        24.59        28.04        13.74 
TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A153 
       38.53        27.42        29.26        24.59        27.39        19.27 
TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15G TCGA-E2-A15H 
       10.68        18.18        15.81        16.50        10.36         1.38 
TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A1IE TCGA-E2-A1IG 
       10.88        12.99        10.85         9.01        32.32        24.82 
TCGA-E2-A1IK TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E9-A1R3 
       17.03        20.81        33.37        12.76        15.22         2.10 
TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RB TCGA-E9-A1RC 
        0.95         1.38         2.76         1.12         0.69        40.37 
TCGA-E9-A1RD TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A226 TCGA-E9-A245 TCGA-E9-A247 
        0.66         1.55         1.25         0.53         0.82         0.39 
TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A2JS TCGA-E9-A3HO TCGA-EW-A1J1 TCGA-EW-A1J6 
        0.92         0.33         0.43         0.62         9.27        19.56 
TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ TCGA-EW-A1P0 TCGA-EW-A1P5 TCGA-EW-A1P6 
       18.48        19.50        30.94        36.85        12.00        10.26 
TCGA-EW-A1PC TCGA-EW-A1PE TCGA-EW-A2FW TCGA-GI-A2C8 TCGA-GM-A2DC TCGA-GM-A2DM 
        6.12         3.48         6.25         6.97        53.52        76.64 

$subtype2
TCGA-A1-A0SB TCGA-A1-A0SI TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P 
        8.52        20.84        31.79        28.01        19.17        17.98 
TCGA-A2-A04Q TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04W TCGA-A2-A0CM TCGA-A2-A0CX 
       41.92        64.11        22.03        63.06        24.79        42.84 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0ST TCGA-A2-A0SW TCGA-A2-A0SX 
       21.14        25.84        25.02        54.02        44.84        42.35 
TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM 
       11.08        10.59         7.96         8.28        10.72        21.73 
TCGA-A2-A1G1 TCGA-A2-A25F TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E 
       12.20         3.72         8.32        12.26         8.78         9.44 
TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I TCGA-A8-A07C TCGA-A8-A07O TCGA-A8-A07R 
        8.45         6.87         4.01        19.07         9.99         8.98 
TCGA-A8-A07U TCGA-A8-A08L TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09X TCGA-A8-A0A7 
        9.96         9.99         0.99        33.99        14.01         0.99 
TCGA-AC-A23H TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AL 
        2.66        38.53         1.02         1.78         1.71         6.48 
TCGA-AN-A0AM TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FV TCGA-AN-A0FX 
        0.16         0.33         7.92         7.56         0.33         0.33 
TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J4 TCGA-AO-A0J6 
        0.53         0.33        59.05        19.23         9.67        25.48 
TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D 
       64.60        43.36       102.54        94.59        96.10        64.04 
TCGA-AO-A12F TCGA-AO-A1KR TCGA-AQ-A04J TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AR-A0TP 
       48.36        70.36         5.23       109.94         5.62        78.64 
TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH 
       37.41        11.84         0.49         0.26        53.49        75.55 
TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY 
       61.84        52.73        43.53        43.04        17.19        20.19 
TCGA-AR-A24Q TCGA-AR-A24U TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 TCGA-AR-A2LH 
       66.02        53.36        45.14        39.85        93.83        20.22 
TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0IJ TCGA-B6-A0IK 
       20.38        77.62       125.79        32.58       176.98        18.77 
TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      127.27       211.53       100.67        89.46       131.21        21.47 
TCGA-B6-A0X1 TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B7 
      186.44       101.52        38.79        20.45        39.55        56.98 
TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0E0 
       24.85        44.02        53.65        11.67        48.23         4.37 
TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G 
        9.60        31.00        28.50         5.59        12.23         2.01 
TCGA-BH-A18Q TCGA-BH-A18T TCGA-BH-A18V TCGA-BH-A1EN TCGA-BH-A1EX TCGA-BH-A1F0 
       55.63         7.36        51.12        67.46        49.58        25.81 
TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FU TCGA-BH-A203 TCGA-BH-A208 TCGA-C8-A137 
       97.48       114.12        72.07        38.60        57.83         0.85 
TCGA-C8-A1HJ TCGA-C8-A1HK TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A275 TCGA-C8-A278 
        0.16         0.23         0.36         0.43         0.03         0.03 
TCGA-C8-A27B TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 
        0.99         8.68         6.90         2.01         5.65         0.07 
TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL 
        8.15         0.59         3.16         6.15         3.58         8.71 
TCGA-D8-A1JM TCGA-D8-A1XK TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A27F 
        7.82        10.72         5.82         6.35         3.85         7.46 
TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14X 
        4.60         4.73        44.38        16.01        27.78        22.75 
TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A152 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ 
       22.62        19.43        19.33        14.79        16.93        64.57 
TCGA-E2-A1B0 TCGA-E2-A1II TCGA-E2-A1LB TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI 
       41.79        27.95        31.96        11.51        94.52        90.41 
TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RH TCGA-E9-A243 TCGA-E9-A244 
        8.75        33.34         7.86         0.46         1.41         0.66 
TCGA-E9-A248 TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB 
        0.69        15.22        16.47        20.88         7.86        19.99 
TCGA-EW-A1PH TCGA-EW-A2FR TCGA-GI-A2C9 TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DF 
        4.57        36.82        23.11        53.10        43.04        42.71 
TCGA-GM-A2DH 
       42.28 

$subtype3
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SH TCGA-A1-A0SJ TCGA-A2-A04X 
       14.37        43.40        48.10        47.24        14.01        44.35 
TCGA-A2-A04Y TCGA-A2-A0CL TCGA-A2-A0CP TCGA-A2-A0CT TCGA-A2-A0CV TCGA-A2-A0CZ 
       25.08        60.07        82.03        63.02        61.48        43.99 
TCGA-A2-A0D3 TCGA-A2-A0EM TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0EQ TCGA-A2-A0ES 
       24.20        90.64        82.68        71.70        67.50        32.91 
TCGA-A2-A0EU TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SU TCGA-A2-A0SY 
       24.10        17.92        25.32        18.05        44.42        37.94 
TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T5 TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YD 
       14.99        12.99        10.55        11.31        13.05        18.08 
TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FZ 
       11.77        10.98         8.81        15.12         7.27        13.45 
TCGA-A2-A1G0 TCGA-A2-A1G4 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25D 
       12.49        12.23         4.34        42.25        97.58         7.99 
TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A7-A0CG TCGA-A7-A0CH TCGA-A7-A0D9 TCGA-A7-A0DB 
       11.93        26.40         5.46         5.29         5.23         4.60 
TCGA-A7-A26E TCGA-A7-A26H TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3J1 TCGA-A8-A07E 
       13.84         2.10         2.20         5.95         2.47        19.99 
TCGA-A8-A07J TCGA-A8-A08O TCGA-A8-A095 TCGA-A8-A097 TCGA-A8-A09A TCGA-A8-A09B 
       12.00        30.97        41.95        12.00         9.99        12.00 
TCGA-A8-A09D TCGA-A8-A09V TCGA-A8-A0A1 TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A6 
       13.02        15.02        12.00        19.00        13.02        21.04 
TCGA-A8-A0AB TCGA-AC-A23C TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AC-A2FB TCGA-AC-A2FF 
       17.00         0.95        10.82         1.45         1.45        55.40 
TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FO TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AN-A046 
       36.99        38.79        50.70         0.69         1.15         0.33 
TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0FW TCGA-AN-A0XL TCGA-AN-A0XO TCGA-AN-A0XS 
        7.17         6.28         0.36         0.33        12.33         0.33 
TCGA-AN-A0XT TCGA-AN-A0XV TCGA-AO-A03M TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03V 
        0.33         5.33        47.84        56.12        39.02        29.13 
TCGA-AO-A0J5 TCGA-AO-A0J9 TCGA-AO-A0JA TCGA-AO-A0JC TCGA-AO-A0JD TCGA-AO-A0JF 
       24.16        41.26        11.38        50.86        59.61        11.64 
TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A12A TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A1KO 
       14.76        49.71        90.54        57.27        41.59        14.73 
TCGA-AQ-A1H3 TCGA-AR-A0TQ TCGA-AR-A0TT TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AN 
        5.33        49.32        55.20        51.22        48.82        43.69 
TCGA-AR-A1AP TCGA-AR-A1AU TCGA-AR-A1AW TCGA-AR-A1AX TCGA-AR-A24M TCGA-AR-A24N 
       39.95        46.32        35.24        36.26        65.42        68.19 
TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24S TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A24X 
       65.65         0.85        62.07        53.26        50.96        48.16 
TCGA-AR-A252 TCGA-AR-A255 TCGA-AR-A2LE TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
       40.64        34.78       128.65        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-B6-A0I5 TCGA-B6-A0I9 TCGA-B6-A0IE TCGA-B6-A0IH TCGA-B6-A0IN 
       16.96       149.56        12.13        65.69       112.37        84.59 
TCGA-B6-A0IP TCGA-B6-A0RG TCGA-B6-A0RN TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WS 
      110.93        68.45       172.96       140.48       157.41        97.48 
TCGA-B6-A0WY TCGA-B6-A0X0 TCGA-B6-A0X7 TCGA-B6-A1KI TCGA-B6-A2IU TCGA-BH-A0AU 
      113.75       129.70        58.88        48.10       159.12        24.53 
TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B5 TCGA-BH-A0B8 
       25.55        28.50        46.92        37.74        48.36        51.58 
TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BJ TCGA-BH-A0BM 
       37.22        32.02        18.21        25.68        21.70        36.72 
TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0C0 TCGA-BH-A0C3 
       35.67        48.69        27.16        53.92        41.75        48.13 
TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DH TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DO 
       31.17        23.44        38.01        22.13        13.91        17.26 
TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX 
       15.65         3.22         2.53        38.47        45.17        47.41 
TCGA-BH-A0E2 TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H3 
       12.36        46.19        32.65        30.15        10.78        37.78 
TCGA-BH-A0H5 TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HK 
       35.51        41.00        28.14        26.50        23.90         5.85 
TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HX TCGA-BH-A0W4 TCGA-BH-A0W5 
        2.50        13.61        36.85        27.25         5.75        17.85 
TCGA-BH-A0W7 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18M TCGA-BH-A18R TCGA-BH-A1EO 
       18.35         8.81         7.23        72.56        37.51        91.99 
TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EW TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FH 
       82.85        42.28        55.69       120.62        74.73        36.92 
TCGA-BH-A1FL TCGA-BH-A201 TCGA-BH-A209 TCGA-BH-A28Q TCGA-C8-A1HI TCGA-C8-A26W 
       55.00         6.87       130.16         6.44         0.07         0.23 
TCGA-D8-A141 TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1JH TCGA-D8-A1JU TCGA-D8-A1X8 
        3.72         1.61        11.31         9.34         3.48         8.94 
TCGA-D8-A1XB TCGA-D8-A1XM TCGA-D8-A1Y0 TCGA-D8-A1Y2 TCGA-D8-A27I TCGA-D8-A27K 
        6.61         7.17         5.46         2.37         6.08         3.88 
TCGA-D8-A27L TCGA-D8-A27P TCGA-D8-A27T TCGA-D8-A27V TCGA-E2-A108 TCGA-E2-A10F 
        4.11         0.76         4.44         2.40         4.08        11.84 
TCGA-E2-A14Q TCGA-E2-A14Z TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15I 
       32.02        17.03        16.31        10.36        17.00        13.51 
TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15M TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1B4 
       15.22         1.12         7.69        10.36        44.75        29.95 
TCGA-E2-A1B5 TCGA-E2-A1BC TCGA-E2-A1BD TCGA-E2-A1IF TCGA-E2-A1IH TCGA-E2-A1IJ 
       25.45         9.76        10.42        31.43        21.63        23.84 
TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A3DX 
        0.46        12.89        14.73         4.18        43.13         7.13 
TCGA-E9-A1R2 TCGA-E9-A1RI TCGA-E9-A227 TCGA-E9-A295 TCGA-E9-A2JT TCGA-EW-A1IW 
        0.62         1.58         0.79         0.69         0.76         8.28 
TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1OV 
       35.57         8.48         4.57         8.28         7.46        17.16 
TCGA-EW-A1P3 TCGA-EW-A1PA TCGA-EW-A1PD TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FS 
       32.45         8.78         5.72         4.57        28.77        38.56 
TCGA-EW-A2FV TCGA-GM-A2D9 TCGA-GM-A2DA TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL 
        7.82        59.57       194.27        61.91        62.33        90.81 
TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NY 
       77.33        53.33        24.43 

subtype1 subtype2 subtype3 
    0.03     0.03     0.07 
subtype1 subtype2 subtype3 
  223.40   211.53   194.27 
subtype1 subtype2 subtype3 
   17.00    19.43    23.44 
[1] "0.0 - 223.4 (17.0)" "0.0 - 211.5 (19.4)" "0.1 - 194.3 (23.4)"
  [1] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
  [7] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
 [13] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [19] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
 [25] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [49] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
 [55] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [61] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [67] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [73] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
 [79] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [91] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [97] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[103] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[109] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[139] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[157] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[169] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[175] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[181] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[187] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[205] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[211] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[217] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[223] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[229] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[235] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[247] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[259] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[265] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[289] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[295] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[301] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[307] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[313] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[319] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[331] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[337] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[343] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[349] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[355] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[373] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[379] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[385] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[391] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[397] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[403] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[409] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[415] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[421] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[433] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[439] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[445] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[451] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[457] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[463] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[469] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[475] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[481] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[487] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[493] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[499] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[505] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[511] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[517] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[523] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[529] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[535] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[541] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[547] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[553] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[559] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[565] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[571] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[577] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[583] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[589] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[595] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[601] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[607] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[613] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[619] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[625] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[631] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[637] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[643] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[649] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[655] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[661] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[667] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[673] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[679] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[685] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[691] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[697] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[703] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[709] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[715] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[721] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[727] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[733] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[739] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[745] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[751] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[757] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[763] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[769] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[775] "subtype1" "subtype3" "subtype3" "subtype3"
  [1] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
  [7] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
 [13] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [19] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
 [25] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [49] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
 [55] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [61] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [67] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [73] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
 [79] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [91] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [97] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[103] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[109] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[139] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[157] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[169] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[175] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[181] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[187] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[205] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[211] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[217] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[223] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[229] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[235] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[247] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[259] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[265] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[289] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[295] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[301] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[307] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[313] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[319] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[331] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[337] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[343] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[349] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[355] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[373] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[379] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[385] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[391] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[397] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[403] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[409] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[415] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[421] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[433] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[439] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[445] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[451] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[457] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[463] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[469] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[475] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[481] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[487] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[493] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[499] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[505] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[511] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[517] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[523] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[529] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[535] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[541] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[547] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[553] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[559] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[565] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[571] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[577] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[583] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[589] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[595] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[601] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[607] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[613] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[619] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[625] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[631] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[637] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[643] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[649] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[655] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[661] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[667] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[673] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[679] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[685] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[691] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[697] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[703] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[709] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[715] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[721] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[727] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[733] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[739] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[745] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[751] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[757] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[763] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[769] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[775] "subtype1" "subtype3" "subtype3" "subtype3"
  [1] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
  [7] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
 [13] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [19] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
 [25] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [49] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
 [55] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [61] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [67] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [73] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
 [79] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [91] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [97] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[103] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[109] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[139] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[157] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[169] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[175] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[181] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[187] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[205] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[211] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[217] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[223] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[229] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[235] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[247] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[259] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[265] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[289] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[295] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[301] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[307] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[313] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[319] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[331] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[337] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[343] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[349] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[355] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[361] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[367] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[373] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[379] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[385] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[391] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[397] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[403] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[409] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[415] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[421] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[433] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[439] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[445] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[451] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[457] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[463] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[469] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[475] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[481] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[487] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[493] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[499] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[505] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[511] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[517] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[523] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[529] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[535] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[541] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[547] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[553] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[559] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[565] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[571] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[577] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[583] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[589] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[595] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[601] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[607] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[613] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[619] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[625] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[631] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[637] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[643] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[649] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[655] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[661] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[667] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[673] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[679] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[685] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[691] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[697] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[703] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[709] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[715] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[721] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[727] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[733] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[739] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[745] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[751] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[757] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[763] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[769] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[775] "subtype1" "subtype3" "subtype3" "subtype3"
D8V2, continuous
D8V3, binary
          cls
clus         0   1
  subtype1 329   8
  subtype2 209   0
  subtype3 288   1
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  329    8
  subtype2  209    0
  subtype3  288    1
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      329      209      288
  MALE          8        0        1
D8V4, binary
          cls
clus         0   1
  subtype1  74 263
  subtype2  57 152
  subtype3  78 211
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   74  263
  subtype2   57  152
  subtype3   78  211
     clus
vv    subtype1 subtype2 subtype3
  NO        74       57       78
  YES      263      152      211
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 300   7  30
  subtype2        0 193   4  12
  subtype3        2 254   4  29
D8V5, multiclass
          vv
clus       N0 N0 (I+) N0 (I-) N0 (MOL+) N1 N1A N1B N1C N1MI N2 N2A N3 N3A N3B
  subtype1 91       4      37         0 47  60  15   0   10 25  22  7  12   0
  subtype2 71       5      39         0 27  17   8   1    2 12  11  4   7   1
  subtype3 78      13      53         1 26  47   9   1   10 13  17  6  10   0
          vv
clus       N3C NX
  subtype1   0  7
  subtype2   1  3
  subtype3   0  5
D8V6, multiclass
D8V7, continuous
D8V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      14       19        4        2       113        84         1
  subtype2      15       15        0        1        91        42         1
  subtype3      40       29        3        5        85        60         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         54         20         12        7         0       7
  subtype2         22          2         11        4         0       4
  subtype3         41          1         14        4         1       6
D8V9, multiclass

Clustering(9) Variable = MIRSEQ_CNMF
D9V1, survival
          sevent
clus2        0   1
  subtype1 147  20
  subtype2 361  39
  subtype3 186  36
subtype1 subtype2 subtype3 
     167      400      222 
subtype1 subtype2 subtype3 
      20       39       36 
$subtype1
TCGA-A1-A0SB TCGA-A2-A0CU TCGA-A2-A0CZ TCGA-A2-A0EN TCGA-A2-A0ES TCGA-A2-A0EV 
        8.52         5.16        43.99        82.68        32.91        17.92 
TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T1 TCGA-A2-A0T3 
       25.32        18.05        54.02        42.35        10.59        14.99 
TCGA-A2-A0T6 TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FZ TCGA-A2-A1G0 TCGA-A2-A1G6 
       11.31        10.98         8.81        13.45        12.49         4.34 
TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25D TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A7-A26G 
       42.25        97.58         7.99        11.93        26.40         6.87 
TCGA-A7-A26H TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J1 TCGA-AC-A23G TCGA-AC-A2B8 
        2.10         4.96         4.87         2.47        10.82         1.45 
TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO 
        1.45        55.40        36.99        38.79        26.04        50.70 
TCGA-AC-A2QJ TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AO-A03R TCGA-AO-A03T 
        2.27         0.99         0.69         1.15        56.12        39.02 
TCGA-AO-A03V TCGA-AO-A0JC TCGA-AO-A0JG TCGA-AO-A12A TCGA-AO-A12E TCGA-AO-A1KO 
       29.13        50.86        14.76        90.54        57.27        14.73 
TCGA-AQ-A04J TCGA-AQ-A1H3 TCGA-AR-A0TY TCGA-AR-A1AJ TCGA-AR-A1AK TCGA-AR-A1AL 
        5.23         5.33        55.86        52.73        51.22        48.82 
TCGA-AR-A1AO TCGA-AR-A1AU TCGA-AR-A1AX TCGA-AR-A24T TCGA-AR-A24U TCGA-AR-A24W 
       43.53        46.32        36.26        53.26        53.36        50.96 
TCGA-AR-A252 TCGA-AR-A2LH TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
       40.64        20.22         7.33        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-AR-A2LR TCGA-B6-A0IH TCGA-B6-A0IK TCGA-B6-A0RQ TCGA-B6-A0RU 
       16.96        20.38       112.37        18.77       140.48       131.21 
TCGA-B6-A2IU TCGA-BH-A0AZ TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0B7 TCGA-BH-A0BD 
      159.12        28.50        48.36        56.94        56.98        18.21 
TCGA-BH-A0BF TCGA-BH-A0BL TCGA-BH-A0BO TCGA-BH-A0BQ TCGA-BH-A0BZ TCGA-BH-A0C3 
       25.68        44.02        35.67        27.16        49.05        48.13 
TCGA-BH-A0DE TCGA-BH-A0DI TCGA-BH-A0DO TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX 
       31.17        22.13        17.26        38.47        45.17        47.41 
TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0RX TCGA-BH-A0W4 
       46.19        32.65        37.78        35.51         5.59         5.75 
TCGA-BH-A18F TCGA-BH-A18M TCGA-BH-A1EU TCGA-BH-A1EW TCGA-BH-A1EX TCGA-BH-A1F0 
        8.81        72.56        42.28        55.69        49.58        25.81 
TCGA-BH-A1F2 TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A1FU TCGA-BH-A201 
       31.53       120.62        74.73        36.92        72.07         6.87 
TCGA-BH-A208 TCGA-BH-A28O TCGA-C8-A26X TCGA-C8-A26Y TCGA-D8-A145 TCGA-D8-A1JH 
       57.83        10.62         0.36         0.43         1.61         9.34 
TCGA-D8-A1JU TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XM TCGA-D8-A27G TCGA-D8-A27I 
        3.48         8.94         6.61         7.17         6.87         6.08 
TCGA-D8-A27L TCGA-D8-A27M TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27R TCGA-D8-A27T 
        4.11         4.73         4.77         0.76         2.96         4.44 
TCGA-E2-A108 TCGA-E2-A14N TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A14Z TCGA-E2-A15D 
        4.08        44.38        32.02        27.55        17.03        10.36 
TCGA-E2-A15E TCGA-E2-A15M TCGA-E2-A1B1 TCGA-E2-A1B6 TCGA-E2-A1BC TCGA-E2-A1IF 
       17.00         7.69        44.75        11.11         9.76        31.43 
TCGA-E2-A1IH TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1LE TCGA-E2-A2P5 TCGA-E2-A3DX 
       21.63         4.18        43.13        28.90        10.72         7.13 
TCGA-E9-A227 TCGA-E9-A295 TCGA-E9-A2JT TCGA-EW-A1IW TCGA-EW-A1J2 TCGA-EW-A1P1 
        0.79         0.69         0.76         8.28         4.57        30.21 
TCGA-EW-A1P7 TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FS TCGA-EW-A2FV TCGA-EW-A3U0 
       20.88         4.57        28.77        38.56         7.82         7.53 
TCGA-GI-A2C8 TCGA-GM-A2DB TCGA-GM-A2DC TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DI 
        6.97        53.10        53.52        43.04        42.71        61.91 
TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NW 
       62.33        90.81        77.33        53.33        98.04 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH TCGA-A1-A0SI 
       14.37        43.40        48.10        14.24        47.24        20.84 
TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04R 
       14.01         7.96        39.32        18.18       103.66        77.72 
TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CP TCGA-A2-A0CQ TCGA-A2-A0CS 
       63.12        63.06        25.08        82.03        78.64        75.55 
TCGA-A2-A0CT TCGA-A2-A0CV TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0EO 
       63.02        61.48        24.20        16.31        90.64        71.70 
TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0EY TCGA-A2-A0SU TCGA-A2-A0SV 
       62.53        26.53        24.10        15.95        44.42        27.12 
TCGA-A2-A0SY TCGA-A2-A0T4 TCGA-A2-A0T5 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YD 
       37.94        12.99        10.55        13.05        21.14        18.08 
TCGA-A2-A0YF TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW 
        9.50        12.46        11.77        23.77        15.12         7.27 
TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E TCGA-A7-A0CD 
       30.74        12.23         8.48         9.37        82.55         5.59 
TCGA-A7-A0CG TCGA-A7-A0CH TCGA-A7-A0D9 TCGA-A7-A0DB TCGA-A7-A13F TCGA-A7-A13G 
        5.46         5.29         5.23         4.60         6.44         6.84 
TCGA-A7-A26E TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3J0 TCGA-A8-A06P TCGA-A8-A06Q 
       13.84         2.20         5.95         2.50        13.02         1.02 
TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 TCGA-A8-A079 
       41.06        29.00        26.01         1.02        17.00         9.01 
TCGA-A8-A07B TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07J TCGA-A8-A07P TCGA-A8-A07S 
       33.01        19.99        18.94        12.00        10.98         7.96 
TCGA-A8-A07Z TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G 
       28.04        15.06        36.95        13.02         0.99        19.92 
TCGA-A8-A08I TCGA-A8-A08O TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A091 TCGA-A8-A092 
       12.00        30.97        93.04        40.01        19.07        16.01 
TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A097 TCGA-A8-A099 TCGA-A8-A09A TCGA-A8-A09B 
       17.92        41.95        12.00         9.99         9.99        12.00 
TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N 
        1.02        13.02        30.97        29.95        15.02         1.02 
TCGA-A8-A09T TCGA-A8-A0A1 TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0A9 
       19.00        12.00        19.00        13.02        21.04        13.02 
TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23H TCGA-AC-A2BM 
       17.00        38.04         0.95         2.37         2.66        38.20 
TCGA-AC-A2QI TCGA-AC-A3TN TCGA-AN-A03X TCGA-AN-A041 TCGA-AN-A046 TCGA-AN-A049 
        0.92         1.12         0.33         0.23         0.33         0.62 
TCGA-AN-A04A TCGA-AN-A0AK TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FK 
        2.93         7.33         0.30         6.41         4.60         6.97 
TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0XL TCGA-AN-A0XN TCGA-AN-A0XP TCGA-AN-A0XR 
        7.17         6.28         0.33         0.33         0.30         0.33 
TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XV TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M 
        0.33         0.33         5.33         5.59        80.28        47.84 
TCGA-AO-A03N TCGA-AO-A0J3 TCGA-AO-A0J5 TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0J9 
       54.08         9.93        24.16         8.55         9.11        41.26 
TCGA-AO-A0JA TCGA-AO-A0JB TCGA-AO-A0JD TCGA-AO-A0JF TCGA-AO-A0JI TCGA-AO-A0JJ 
       11.38        37.81        59.61        11.64        38.53        49.71 
TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A128 TCGA-AO-A12B TCGA-AO-A12C 
       60.03        99.22        93.70        94.59        77.56        65.52 
TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KP TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A1H2 
       41.59        28.34        82.62        17.79        14.43         7.56 
TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TX TCGA-AR-A0TZ TCGA-AR-A0U3 TCGA-AR-A1AN 
        5.26        29.72         0.49        43.17        74.40        43.69 
TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A24K 
       39.95        40.83        41.82        42.58        35.24        50.89 
TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24R 
       73.02        65.42        68.19        65.65         0.85        57.37 
TCGA-AR-A24V TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 TCGA-AR-A255 TCGA-AR-A2LE 
       54.18        48.16        51.75        56.12        34.78       128.65 
TCGA-AR-A2LK TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC 
       42.84       149.56        24.62       220.87       129.57        50.70 
TCGA-B6-A0IG TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0RG 
      146.50       126.12        84.59       110.14       110.93        68.45 
TCGA-B6-A0RH TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO 
      188.98       223.40        81.17        78.02       172.96       162.02 
TCGA-B6-A0RP TCGA-B6-A0RV TCGA-B6-A0WS TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW 
      102.77       157.41        97.48       177.40        79.63        17.95 
TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-B6-A1KI 
      129.57       129.70        28.24        68.94        43.59        48.10 
TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B4 
      109.48        24.53        25.55        46.92        37.74        39.16 
TCGA-BH-A0B8 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BP 
       51.58        37.22        32.02        21.70        36.72        48.69 
TCGA-BH-A0BR TCGA-BH-A0BS TCGA-BH-A0BV TCGA-BH-A0C1 TCGA-BH-A0C7 TCGA-BH-A0DG 
       53.65        53.92        49.94        43.99        42.90        23.44 
TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0E1 
       38.01        13.91        15.65         3.22         2.53        15.68 
TCGA-BH-A0E7 TCGA-BH-A0EI TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H6 TCGA-BH-A0H7 
       44.78        24.43        10.78        15.16        24.56        23.05 
TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HK 
       41.00        28.14        26.50        23.90        20.35         5.85 
TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX 
        2.50        13.61        36.85        12.89        51.29        27.25 
TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18I TCGA-BH-A18J 
       28.50         5.92        17.85        18.35         7.23        20.09 
TCGA-BH-A18K TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-BH-A1EN TCGA-BH-A1EO 
       90.81        37.74        30.28        66.05        67.46        91.99 
TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EV TCGA-BH-A1EY TCGA-BH-A1F5 TCGA-BH-A1F8 
      113.82        82.85        12.00        17.69        89.16        24.62 
TCGA-BH-A1FG TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FR TCGA-BH-A202 TCGA-BH-A204 
      122.89        63.35        55.00       144.59         0.72        83.31 
TCGA-BH-A28Q TCGA-C8-A138 TCGA-C8-A1HI TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HN 
        6.44         0.23         0.07         0.23         0.07         0.07 
TCGA-C8-A26V TCGA-C8-A26W TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A274 TCGA-D8-A140 
        0.30         0.23         0.13         0.20         0.03         0.89 
TCGA-D8-A141 TCGA-D8-A146 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JD TCGA-D8-A1JE 
        3.72        11.31         8.42         8.15         8.98         1.87 
TCGA-D8-A1JF TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS 
        3.16         0.69         9.01         7.13         5.49         3.45 
TCGA-D8-A1JT TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XC 
        4.04         7.76         2.79        12.49         9.01         2.66 
TCGA-D8-A1XD TCGA-D8-A1XG TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XU 
        5.10         6.44         7.96         5.52         1.64         4.90 
TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A27E TCGA-D8-A27K 
        2.66         5.46         3.78         2.37         5.98         3.88 
TCGA-D8-A27V TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A109 
        2.40         0.49        38.24        51.12        25.08        38.53 
TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14O 
       11.57        24.59        28.04        13.74        11.84        38.53 
TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A152 TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 
       27.42        29.26        19.33        19.27        10.68        18.18 
TCGA-E2-A156 TCGA-E2-A15C TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I 
       15.81        16.31        15.39        10.36         1.38        13.51 
TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15R 
       15.22         1.12        10.88        12.99        10.36        10.85 
TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1BD TCGA-E2-A1IE 
        9.01         8.78        29.95        25.45        10.42        32.32 
TCGA-E2-A1IG TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO 
       24.82        23.84        17.03         0.46        12.89        14.73 
TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A1LB TCGA-E2-A2P6 TCGA-E9-A1R3 
       33.37        12.76        15.22        31.96         5.49         2.10 
TCGA-E9-A1R4 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RA TCGA-E9-A1RC TCGA-E9-A1RD 
        0.95         2.76         1.12         0.95        40.37         0.66 
TCGA-E9-A1RE TCGA-E9-A1RG TCGA-E9-A1RI TCGA-E9-A226 TCGA-E9-A245 TCGA-E9-A247 
        1.55         1.15         1.58         0.53         0.82         0.39 
TCGA-E9-A24A TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J1 TCGA-EW-A1J3 
        0.33        35.57         8.48         8.55         9.27         8.28 
TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OZ TCGA-EW-A1P0 TCGA-EW-A1P3 
        7.46        19.56        18.48        30.94        36.85        32.45 
TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PD TCGA-EW-A1PE TCGA-EW-A2FW 
       12.00        10.26         8.78         5.72         3.48         6.25 
TCGA-GM-A2D9 TCGA-GM-A2DA TCGA-GM-A2DM TCGA-GM-A3NY 
       59.57       194.27        76.64        24.43 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        64.11 
TCGA-A2-A04U TCGA-A2-A04X TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CW TCGA-A2-A0CY 
       22.03        44.35        60.07        24.79        57.53        42.35 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0SW TCGA-A2-A0T0 
       21.14        25.84        25.02        67.50        44.84        11.08 
TCGA-A2-A0T2 TCGA-A2-A0YG TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A25F TCGA-A7-A0CE 
        7.96        13.28        21.73        12.20         3.72         8.32 
TCGA-A7-A0CJ TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26I 
        6.18        12.26         8.78         9.44         8.45         4.01 
TCGA-A7-A3RF TCGA-A8-A06O TCGA-A8-A06R TCGA-A8-A076 TCGA-A8-A07C TCGA-A8-A07G 
        1.78        13.02        17.95        53.95        19.07        18.94 
TCGA-A8-A07I TCGA-A8-A07L TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A07W 
       14.01        17.00         9.99         8.98         9.96         9.99 
TCGA-A8-A082 TCGA-A8-A08B TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08R TCGA-A8-A08S 
       18.05        23.08        37.05         9.99         0.99        19.07 
TCGA-A8-A08X TCGA-A8-A09I TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09X TCGA-A8-A0A7 
       33.99        33.07        25.02         8.98        14.01         0.99 
TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AN-A03Y TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AJ 
       38.53         1.02         0.33         1.78         1.71         7.99 
TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FT 
        6.48         0.16         0.30         7.92         7.56         6.02 
TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0FX TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0G0 
        0.33         0.36         0.33         0.33         0.33         0.53 
TCGA-AN-A0XO TCGA-AN-A0XU TCGA-AO-A03O TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J4 
       12.33         0.33        81.63        59.05        19.23         9.67 
TCGA-AO-A0J6 TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D 
       25.48        64.60        43.36       102.54        96.10        64.04 
TCGA-AO-A12F TCGA-AO-A1KQ TCGA-AO-A1KR TCGA-AO-A1KS TCGA-AQ-A04L TCGA-AQ-A0Y5 
       48.36        49.94        70.36         0.53       109.94         5.62 
TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0U1 TCGA-AR-A0U2 
       78.64        49.32        37.41        55.20         6.08        83.87 
TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY 
       53.49        75.55        61.84        43.04        17.19        20.19 
TCGA-AR-A24H TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 
      109.58        66.02        62.07        45.14        39.85        93.83 
TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IE TCGA-B6-A0IJ 
       77.62       125.79        32.58        12.13        65.69       176.98 
TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0WX TCGA-B6-A0WY 
      127.27       211.53       100.67        89.46        21.47       113.75 
TCGA-B6-A0X7 TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B9 
       58.88       101.52        38.79        20.45        39.55        51.68 
TCGA-BH-A0BG TCGA-BH-A0BT TCGA-BH-A0BW TCGA-BH-A0C0 TCGA-BH-A0DD TCGA-BH-A0DL 
       24.85        45.57        11.67        41.75        45.80        48.23 
TCGA-BH-A0DZ TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A0GY TCGA-BH-A0WA 
       16.27         4.37         9.60        31.00        30.15        12.23 
TCGA-BH-A18G TCGA-BH-A18L TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18U 
        2.01        26.66        55.63        37.51         7.36        51.39 
TCGA-BH-A18V TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FM TCGA-BH-A1FN TCGA-BH-A203 
       51.12        97.48       114.12        45.63        72.07        38.60 
TCGA-BH-A209 TCGA-C8-A137 TCGA-C8-A1HJ TCGA-C8-A1HM TCGA-C8-A275 TCGA-C8-A278 
      130.16         0.85         0.16         0.20         0.03         0.03 
TCGA-C8-A27A TCGA-C8-A27B TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 
       12.20         0.99         8.68         6.90         2.01         5.65 
TCGA-D8-A147 TCGA-D8-A1JA TCGA-D8-A1JC TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL 
        0.07         0.59         5.85         6.15         3.58         8.71 
TCGA-D8-A1X5 TCGA-D8-A1XF TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL TCGA-D8-A1XQ 
        5.62         6.48        11.57        10.72        10.49         5.82 
TCGA-D8-A1XT TCGA-D8-A1XV TCGA-D8-A1XW TCGA-D8-A1XZ TCGA-D8-A1Y3 TCGA-D8-A27F 
        6.35         4.80         3.85         3.95         4.08         7.46 
TCGA-D8-A27H TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A14X 
        4.60        16.01        27.78        24.59        27.39        22.75 
TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15A TCGA-E2-A1AZ 
       22.62        19.43        14.79        16.93        16.50        64.57 
TCGA-E2-A1B0 TCGA-E2-A1II TCGA-E2-A1L7 TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI 
       41.79        27.95        20.81        11.51        94.52        90.41 
TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1R2 TCGA-E9-A1R5 TCGA-E9-A1RB 
        8.75        33.34         7.86         0.62         1.38         0.69 
TCGA-E9-A1RF TCGA-E9-A1RH TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A248 TCGA-E9-A249 
        1.25         0.46         1.41         0.66         0.69         0.92 
TCGA-E9-A2JS TCGA-EW-A1OV TCGA-EW-A1OW TCGA-EW-A1OY TCGA-EW-A1P4 TCGA-EW-A1P8 
        0.43        17.16        15.22        19.50        16.47         7.86 
TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PH TCGA-EW-A2FR TCGA-GI-A2C9 TCGA-GM-A2DH 
       19.99         6.12         4.57        36.82        23.11        42.28 

subtype1 subtype2 subtype3 
    0.36     0.03     0.03 
subtype1 subtype2 subtype3 
  159.12   223.40   211.53 
subtype1 subtype2 subtype3 
  25.680   17.885   17.965 
[1] "0.4 - 159.1 (25.7)" "0.0 - 223.4 (17.9)" "0.0 - 211.5 (18.0)"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
 [37] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [43] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [49] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [91] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
 [97] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[109] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[121] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[133] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[139] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[193] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[235] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[253] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[265] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[271] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[283] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[289] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[295] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[307] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[313] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[325] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[349] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[361] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[403] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[409] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[415] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[421] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[427] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[433] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[439] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[445] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[451] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[457] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[463] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[469] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[493] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[499] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[505] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[511] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[517] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[523] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[529] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[541] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[547] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[553] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[559] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[565] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[577] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[589] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[601] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[607] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[619] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[625] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[643] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[649] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[661] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[667] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[679] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[685] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[697] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[703] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[709] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[721] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[727] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[733] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[745] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[757] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[763] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[769] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[775] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[781] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[787] "subtype1" "subtype1" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
 [37] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [43] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [49] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [91] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
 [97] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[109] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[121] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[133] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[139] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[193] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[235] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[253] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[265] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[271] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[283] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[289] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[295] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[307] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[313] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[325] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[349] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[361] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[403] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[409] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[415] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[421] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[427] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[433] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[439] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[445] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[451] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[457] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[463] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[469] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[493] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[499] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[505] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[511] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[517] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[523] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[529] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[541] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[547] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[553] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[559] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[565] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[577] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[589] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[601] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[607] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[619] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[625] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[643] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[649] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[661] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[667] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[679] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[685] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[697] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[703] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[709] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[721] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[727] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[733] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[745] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[757] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[763] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[769] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[775] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[781] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[787] "subtype1" "subtype1" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
 [37] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [43] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [49] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [91] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
 [97] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[109] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[121] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[133] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[139] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[193] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[235] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[253] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[265] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[271] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[283] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[289] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[295] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[307] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[313] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[325] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[337] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[349] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[361] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[367] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[403] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[409] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[415] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[421] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[427] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[433] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[439] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[445] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[451] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[457] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[463] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[469] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[493] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[499] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[505] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[511] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[517] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[523] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[529] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[535] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[541] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[547] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[553] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[559] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[565] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[571] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[577] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[589] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[601] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[607] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[619] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[625] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[643] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[649] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[661] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[667] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[679] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[685] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[697] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[703] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[709] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[721] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[727] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[733] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[745] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[757] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[763] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[769] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[775] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[781] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[787] "subtype1" "subtype1" "subtype2"
D9V2, continuous
D9V3, binary
          cls
clus         0   1
  subtype1 174   0
  subtype2 425   6
  subtype3 240   3
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  174    0
  subtype2  425    6
  subtype3  240    3
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      174      425      240
  MALE          0        6        3
D9V4, binary
          cls
clus         0   1
  subtype1  35 139
  subtype2 115 316
  subtype3  60 183
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   35  139
  subtype2  115  316
  subtype3   60  183
     clus
vv    subtype1 subtype2 subtype3
  NO        35      115       60
  YES      139      316      183
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 155   1  17
  subtype2        1 386   7  37
  subtype3        0 215   6  22
D9V5, multiclass
          vv
clus        N0 N0 (I+) N0 (I-) N0 (MOL+)  N1 N1A N1B N1C N1MI  N2 N2A  N3 N3A
  subtype1  48      10      27         1  18  25   7   1    9   2  11   6   8
  subtype2 119       9      62         0  49  80  17   1   10  30  23   8  12
  subtype3  81       3      39         0  34  21   8   0    4  18  16   4   9
          vv
clus       N3B N3C  NX
  subtype1   1   0   0
  subtype2   0   0  11
  subtype3   1   1   4
D9V6, multiclass
D9V7, continuous
D9V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      26       15        1        6        52        36         1
  subtype2      36       36        5        1       137       103         1
  subtype3      10       13        1        1       100        50         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         18          4         14        1         0       0
  subtype2         64         16         13        7         0      12
  subtype3         38          4         13        6         1       5
D9V9, multiclass

Clustering(10) Variable = MIRSEQ_CHIERARCHICAL
D10V1, survival
          sevent
clus2        0   1
  subtype1 154  28
  subtype2 495  61
  subtype3  45   6
subtype1 subtype2 subtype3 
     182      556       51 
subtype1 subtype2 subtype3 
      28       61        6 
$subtype1
TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T TCGA-A2-A04U 
       28.01        19.17        17.98        41.92        64.11        22.03 
TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D2 TCGA-A2-A0EQ 
       60.07        24.79        42.35        21.14        25.02        67.50 
TCGA-A2-A0EV TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YM 
       17.92        54.02        42.35        11.08         7.96        21.73 
TCGA-A2-A1G1 TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F 
       12.20         8.32        12.26         8.78         9.44         8.45 
TCGA-A7-A26G TCGA-A7-A26I TCGA-A8-A06R TCGA-A8-A06U TCGA-A8-A07C TCGA-A8-A07O 
        6.87         4.01        17.95        29.00        19.07         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A07W TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A097 
        8.98         9.96         9.99         0.99        33.99        12.00 
TCGA-A8-A09K TCGA-A8-A09X TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A04C 
       29.95        14.01        38.53         1.02         2.27         1.78 
TCGA-AN-A0AL TCGA-AN-A0AR TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FW TCGA-AN-A0FX 
        6.48         0.30         7.92         7.56         0.36         0.33 
TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J2 
        0.33         0.33         0.53         0.33        59.05        19.23 
TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D 
        9.67        25.48        43.36       102.54        96.10        64.04 
TCGA-AO-A12F TCGA-AO-A1KR TCGA-AO-A1KS TCGA-AQ-A04J TCGA-AQ-A0Y5 TCGA-AR-A0TP 
       48.36        70.36         0.53         5.23         5.62        78.64 
TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TY TCGA-AR-A0U1 TCGA-AR-A0U4 TCGA-AR-A1AH 
       37.41        55.20        55.86         6.08        53.49        75.55 
TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AX 
       61.84        52.73        43.53        43.04        17.19        36.26 
TCGA-AR-A1AY TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR 
       20.19        66.02        62.07        45.14        93.83        20.38 
TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IJ TCGA-B6-A0IQ 
       77.62       125.79        32.58        12.13       176.98       127.27 
TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0X7 TCGA-B6-A1KF 
      211.53       100.67        89.46       131.21        58.88       101.52 
TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BG 
       38.79        20.45        39.55        56.98        51.68        24.85 
TCGA-BH-A0BL TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0DZ TCGA-BH-A0E0 TCGA-BH-A0E6 
       44.02        11.67        48.23        16.27         4.37         9.60 
TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18Q TCGA-BH-A18T TCGA-BH-A18U 
        5.59        12.23         2.01        55.63         7.36        51.39 
TCGA-BH-A18V TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FU TCGA-BH-A203 
       51.12        25.81        97.48       114.12        72.07        38.60 
TCGA-BH-A208 TCGA-C8-A1HJ TCGA-C8-A1HN TCGA-C8-A26X TCGA-C8-A27B TCGA-D8-A13Z 
       57.83         0.16         0.07         0.36         0.99         6.90 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JC TCGA-D8-A1JF TCGA-D8-A1JG 
        2.01         5.65         0.07         5.85         3.16         6.15 
TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1XK TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW 
        3.58         8.71        10.72         5.82         6.35         3.85 
TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-D8-A27R TCGA-E2-A14N TCGA-E2-A14P 
        7.46         4.60         4.73         2.96        44.38        16.01 
TCGA-E2-A14R TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A158 
       27.78        27.39        22.75        22.62        19.43        14.79 
TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1LA 
       16.93        64.57        41.79        11.11        27.95        15.22 
TCGA-E2-A1LB TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK 
       31.96        28.90        11.51        94.52        90.41         8.75 
TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E9-A1RH TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A248 
       33.34         7.86         0.46         1.41         0.66         0.69 
TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH 
       15.22        16.47        20.88         7.86        19.99         4.57 
TCGA-EW-A2FR TCGA-EW-A3U0 TCGA-GI-A2C9 TCGA-GM-A2DA TCGA-GM-A2DB TCGA-GM-A2DD 
       36.82         7.53        23.11       194.27        53.10        43.04 
TCGA-GM-A2DF TCGA-GM-A2DH 
       42.71        42.28 

$subtype2
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH 
        8.52        14.37        43.40        48.10        14.24        47.24 
TCGA-A1-A0SI TCGA-A1-A0SJ TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04R 
       20.84        14.01        39.32        18.18       103.66        77.72 
TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A04Y TCGA-A2-A0CP TCGA-A2-A0CQ 
       63.12        63.06        44.35        25.08        82.03        78.64 
TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0D1 
       75.55        63.02         5.16        61.48        43.99        25.84 
TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ER 
       24.20        16.31        90.64        82.68        71.70        62.53 
TCGA-A2-A0ES TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SU 
       32.91        26.53        24.10        25.32        18.05        44.42 
TCGA-A2-A0SW TCGA-A2-A0SY TCGA-A2-A0T1 TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T5 
       44.84        37.94        10.59        14.99        12.99        10.55 
TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YG 
       11.31        13.05        21.14        18.08         9.50        13.28 
TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A0YT TCGA-A2-A1FV 
       12.46        11.77        10.98         8.81        23.77        15.12 
TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A1FZ TCGA-A2-A1G0 TCGA-A2-A1G4 TCGA-A2-A1G6 
        7.27        30.74        13.45        12.49        12.23         4.34 
TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25D TCGA-A2-A25E 
       42.25        97.58         8.48         9.37         7.99        82.55 
TCGA-A2-A25F TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A7-A0CD TCGA-A7-A0CG TCGA-A7-A0CH 
        3.72        11.93        26.40         5.59         5.46         5.29 
TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A0DB TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A26E 
        6.18         5.23         4.60         6.44         6.84        13.84 
TCGA-A7-A26H TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J0 
        2.10         2.20         5.95         4.96         4.87         2.50 
TCGA-A7-A3J1 TCGA-A7-A3RF TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06T 
        2.47         1.78        13.02        13.02         1.02        41.06 
TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07E TCGA-A8-A07F 
       26.01         1.02        53.95         9.01        19.99        18.94 
TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07J TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S 
       18.94        14.01        12.00        17.00        10.98         7.96 
TCGA-A8-A07Z TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G 
       28.04        15.06        36.95        13.02         0.99        19.92 
TCGA-A8-A08I TCGA-A8-A08L TCGA-A8-A08O TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08Z 
       12.00         9.99        30.97        19.07        93.04        40.01 
TCGA-A8-A091 TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A099 TCGA-A8-A09A 
       19.07        16.01        17.92        41.95         9.99         9.99 
TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09I TCGA-A8-A09M 
       12.00         1.02        13.02        30.97        33.07        15.02 
TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09T TCGA-A8-A0A1 TCGA-A8-A0A2 
        1.02        25.02         8.98        19.00        12.00        19.00 
TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AC-A23E 
       13.02        21.04        13.02        17.00        38.04         2.37 
TCGA-AC-A23G TCGA-AC-A23H TCGA-AC-A2B8 TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF 
       10.82         2.66         1.45        38.20         1.45        55.40 
TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A3BB 
       36.99        38.79        26.04        50.70         0.92         0.99 
TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AC-A3TN TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 
        0.69         1.15         1.12         0.33         0.33         0.23 
TCGA-AN-A046 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS 
        0.33         0.62         2.93         7.33         0.16         0.30 
TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0FT 
        6.41         4.60         6.97         7.17         6.28         6.02 
TCGA-AN-A0XL TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AN-A0XT 
        0.33        12.33         0.30         0.33         0.33         0.33 
TCGA-AN-A0XV TCGA-AN-A0XW TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03R TCGA-AO-A03T 
        5.33         5.59        54.08        81.63        56.12        39.02 
TCGA-AO-A0J3 TCGA-AO-A0J5 TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JA 
        9.93        24.16         8.55         9.11        41.26        11.38 
TCGA-AO-A0JB TCGA-AO-A0JC TCGA-AO-A0JD TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JI 
       37.81        50.86        59.61        11.64        14.76        38.53 
TCGA-AO-A0JJ TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A128 TCGA-AO-A12A 
       49.71        60.03        99.22        93.70        94.59        90.54 
TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KO 
       77.56        65.52        57.27        41.59        28.34        14.73 
TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A1H2 TCGA-AQ-A1H3 
       82.62        49.94        17.79        14.43         7.56         5.33 
TCGA-AR-A0TQ TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 
       49.32         5.26        29.72        43.17        83.87        74.40 
TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AN TCGA-AR-A1AP TCGA-AR-A1AT TCGA-AR-A1AV 
       51.22        48.82        43.69        39.95        41.82        42.58 
TCGA-AR-A1AW TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N 
       35.24       109.58        50.89        73.02        65.42        68.19 
TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24R TCGA-AR-A24T TCGA-AR-A24U TCGA-AR-A24V 
       65.65         0.85        57.37        53.26        53.36        54.18 
TCGA-AR-A24W TCGA-AR-A24X TCGA-AR-A250 TCGA-AR-A252 TCGA-AR-A255 TCGA-AR-A2LE 
       50.96        48.16        56.12        40.64        34.78       128.65 
TCGA-AR-A2LH TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
       20.22        42.84         7.33        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC 
       16.96       149.56        24.62       220.87       129.57        50.70 
TCGA-B6-A0IE TCGA-B6-A0IG TCGA-B6-A0IH TCGA-B6-A0IK TCGA-B6-A0IM TCGA-B6-A0IN 
       65.69       146.50       112.37        18.77       126.12        84.59 
TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0RG TCGA-B6-A0RH TCGA-B6-A0RI TCGA-B6-A0RL 
      110.14       110.93        68.45       188.98       223.40        81.17 
TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0RQ TCGA-B6-A0RV 
       78.02       172.96       162.02       102.77       140.48       157.41 
TCGA-B6-A0WS TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WX TCGA-B6-A0WZ 
       97.48       177.40        79.63        17.95        21.47       129.57 
TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-B6-A1KI TCGA-B6-A1KN 
      129.70        28.24        68.94        43.59        48.10       109.48 
TCGA-B6-A2IU TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B1 
      159.12        24.53        25.55        28.50        46.92        37.74 
TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0B8 TCGA-BH-A0BA TCGA-BH-A0BC 
       39.16        48.36        56.94        51.58        37.22        32.02 
TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BQ 
       18.21        25.68        21.70        36.72        35.67        27.16 
TCGA-BH-A0BR TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C0 
       53.65        53.92        45.57        49.94        49.05        41.75 
TCGA-BH-A0C1 TCGA-BH-A0C3 TCGA-BH-A0C7 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DH 
       43.99        48.13        42.90        31.17        23.44        38.01 
TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DS 
       22.13        13.91        17.26        15.65         3.22         2.53 
TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0E9 
       38.47        45.17        47.41        15.68        44.78        46.19 
TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H3 
       32.65        24.43        30.15        10.78        15.16        37.78 
TCGA-BH-A0H5 TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF 
       35.51        24.56        23.05        28.14        26.50        23.90 
TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HU 
       20.35         5.85         2.50        13.61        36.85        12.89 
TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A0W5 
       51.29        27.25        28.50         5.92         5.75        17.85 
TCGA-BH-A0W7 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18J TCGA-BH-A18K TCGA-BH-A18L 
       18.35         8.81         7.23        20.09        90.81        26.66 
TCGA-BH-A18M TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A1EN 
       72.56        37.74        30.28        37.51        66.05        67.46 
TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EV TCGA-BH-A1EW 
       91.99       113.82        82.85        42.28        12.00        55.69 
TCGA-BH-A1EX TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FB 
       49.58        17.69        31.53        89.16        24.62       120.62 
TCGA-BH-A1FE TCGA-BH-A1FG TCGA-BH-A1FH TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FR 
       74.73       122.89        36.92        55.00        45.63       144.59 
TCGA-BH-A201 TCGA-BH-A202 TCGA-BH-A204 TCGA-BH-A209 TCGA-BH-A28O TCGA-BH-A28Q 
        6.87         0.72        83.31       130.16        10.62         6.44 
TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HI TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM 
        0.85         0.23         0.07         0.23         0.07         0.20 
TCGA-C8-A26V TCGA-C8-A26W TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A TCGA-D8-A13Y 
        0.30         0.23         0.13         0.20        12.20         8.68 
TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1J8 TCGA-D8-A1JD 
        0.89         3.72         1.61        11.31         8.42         8.98 
TCGA-D8-A1JE TCGA-D8-A1JH TCGA-D8-A1JI TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS 
        1.87         9.34         0.69         7.13         5.49         3.45 
TCGA-D8-A1JT TCGA-D8-A1JU TCGA-D8-A1X5 TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X8 
        4.04         3.48         5.62         7.76         2.79         8.94 
TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XG 
       12.49         9.01         6.61         2.66         5.10         6.44 
TCGA-D8-A1XJ TCGA-D8-A1XL TCGA-D8-A1XM TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS 
       11.57        10.49         7.17         7.96         5.52         1.64 
TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A1Y2 
        4.90         4.80         2.66         5.46         3.78         2.37 
TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-D8-A27G TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L 
        4.08         5.98         6.87         6.08         3.88         4.11 
TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27T TCGA-D8-A27V TCGA-D8-A27W TCGA-E2-A105 
        4.77         0.76         4.44         2.40         0.49        38.24 
TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A108 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B 
       51.12        25.08         4.08        38.53        11.57        24.59 
TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14O TCGA-E2-A14Q TCGA-E2-A14S 
       28.04        13.74        11.84        38.53        32.02        27.42 
TCGA-E2-A14T TCGA-E2-A14U TCGA-E2-A14V TCGA-E2-A14Z TCGA-E2-A153 TCGA-E2-A154 
       29.26        27.55        24.59        17.03        19.27        10.68 
TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15E 
       18.18        15.81        16.50        16.31        10.36        17.00 
TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15L TCGA-E2-A15O 
       15.39        10.36        13.51        15.22        10.88        12.99 
TCGA-E2-A15P TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B1 TCGA-E2-A1B4 
       10.36        10.85         9.01         8.78        44.75        29.95 
TCGA-E2-A1B5 TCGA-E2-A1BC TCGA-E2-A1BD TCGA-E2-A1IE TCGA-E2-A1IF TCGA-E2-A1IG 
       25.45         9.76        10.42        32.32        31.43        24.82 
TCGA-E2-A1IH TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO 
       21.63        23.84        17.03         0.46        12.89        14.73 
TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A2P5 
        4.18        43.13        20.81        33.37        12.76        10.72 
TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1R2 TCGA-E9-A1R3 TCGA-E9-A1R6 TCGA-E9-A1R7 
        5.49         7.13         0.62         2.10         2.76         1.12 
TCGA-E9-A1RA TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD TCGA-E9-A1RE TCGA-E9-A1RF 
        0.95         0.69        40.37         0.66         1.55         1.25 
TCGA-E9-A1RG TCGA-E9-A1RI TCGA-E9-A226 TCGA-E9-A227 TCGA-E9-A245 TCGA-E9-A247 
        1.15         1.58         0.53         0.79         0.82         0.39 
TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A295 TCGA-E9-A2JS TCGA-E9-A2JT TCGA-EW-A1IW 
        0.92         0.33         0.69         0.43         0.76         8.28 
TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J1 TCGA-EW-A1J2 TCGA-EW-A1J3 
       35.57         8.48         8.55         9.27         4.57         8.28 
TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OV TCGA-EW-A1OX TCGA-EW-A1OZ TCGA-EW-A1P0 
        7.46        19.56        17.16        18.48        30.94        36.85 
TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PD 
       30.21        32.45        12.00        10.26         8.78         5.72 
TCGA-EW-A1PE TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FS TCGA-EW-A2FW TCGA-GI-A2C8 
        3.48         4.57        28.77        38.56         6.25         6.97 
TCGA-GM-A2D9 TCGA-GM-A2DC TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM 
       59.57        53.52        61.91        62.33        90.81        76.64 
TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NW TCGA-GM-A3NY 
       77.33        53.33        98.04        24.43 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SM TCGA-A2-A0CW TCGA-A2-A0EY TCGA-A2-A0SV TCGA-A8-A075 
       31.79         7.96        57.53        15.95        27.12        17.00 
TCGA-A8-A07B TCGA-A8-A082 TCGA-A8-A08B TCGA-A8-A08J TCGA-A8-A0A7 TCGA-AC-A23C 
       33.01        18.05        23.08        37.05         0.99         0.95 
TCGA-AN-A04D TCGA-AN-A0AJ TCGA-AN-A0FV TCGA-AN-A0XN TCGA-AO-A03L TCGA-AO-A03M 
        1.71         7.99         0.33         0.33        80.28        47.84 
TCGA-AO-A03V TCGA-AO-A0JE TCGA-AQ-A04L TCGA-AR-A0TX TCGA-AR-A1AS TCGA-AR-A1AU 
       29.13        64.60       109.94         0.49        40.83        46.32 
TCGA-AR-A24Z TCGA-AR-A254 TCGA-B6-A0WY TCGA-BH-A0BP TCGA-BH-A0DD TCGA-BH-A0EE 
       51.75        39.85       113.75        48.69        45.80        31.00 
TCGA-BH-A0H9 TCGA-BH-A1FJ TCGA-BH-A1FN TCGA-C8-A26Y TCGA-C8-A274 TCGA-C8-A275 
       41.00        63.35        72.07         0.43         0.03         0.03 
TCGA-C8-A278 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JJ TCGA-D8-A1XF TCGA-D8-A1XZ 
        0.03         8.15         0.59         9.01         6.48         3.95 
TCGA-E2-A152 TCGA-E2-A15H TCGA-E2-A15K TCGA-E2-A15M TCGA-E9-A1R4 TCGA-E9-A1R5 
       19.33         1.38         1.12         7.69         0.95         1.38 
TCGA-EW-A1OY TCGA-EW-A1PC TCGA-EW-A2FV 
       19.50         6.12         7.82 

subtype1 subtype2 subtype3 
    0.07     0.07     0.03 
subtype1 subtype2 subtype3 
  211.53   223.40   113.75 
subtype1 subtype2 subtype3 
   20.09    18.18    17.00 
[1] "0.1 - 211.5 (20.1)" "0.1 - 223.4 (18.2)" "0.0 - 113.8 (17.0)"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
 [13] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
 [19] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [37] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [43] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[139] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[157] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[217] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[223] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[235] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[265] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[277] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[283] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[301] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[307] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[319] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[325] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[343] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[361] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[409] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[415] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[421] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[427] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[433] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[439] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[445] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[451] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[457] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[463] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[469] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[493] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[505] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[511] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[517] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[523] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[529] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[535] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[541] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[547] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[553] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[559] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[565] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[571] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[577] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[589] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[601] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[607] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[619] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[625] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[643] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[649] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[661] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[667] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[679] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[685] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[697] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[709] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[721] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[733] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[745] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[757] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[763] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[769] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[775] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[781] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[787] "subtype2" "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
 [13] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
 [19] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [37] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [43] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[139] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[157] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[217] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[223] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[235] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[265] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[277] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[283] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[301] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[307] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[319] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[325] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[343] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[361] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[409] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[415] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[421] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[427] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[433] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[439] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[445] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[451] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[457] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[463] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[469] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[493] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[505] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[511] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[517] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[523] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[529] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[535] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[541] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[547] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[553] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[559] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[565] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[571] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[577] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[589] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[601] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[607] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[619] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[625] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[643] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[649] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[661] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[667] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[679] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[685] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[697] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[709] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[721] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[733] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[745] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[757] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[763] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[769] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[775] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[781] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[787] "subtype2" "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
 [13] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
 [19] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [37] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [43] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[139] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[157] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[217] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[223] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[235] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[265] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[277] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[283] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[301] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[307] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[319] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[325] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[343] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[361] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[373] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[379] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[385] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[409] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[415] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[421] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[427] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[433] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[439] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[445] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[451] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[457] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[463] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[469] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[481] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[487] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[493] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[505] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[511] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[517] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[523] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[529] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[535] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[541] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[547] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[553] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[559] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[565] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[571] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[577] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[583] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[589] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[595] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[601] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[607] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[613] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[619] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[625] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[631] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[643] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[649] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[655] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[661] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[667] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[673] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[679] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[685] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[697] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[709] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[715] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[721] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[733] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[739] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[745] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[751] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[757] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[763] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[769] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[775] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[781] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[787] "subtype2" "subtype2" "subtype2"
D10V2, continuous
D10V3, binary
          cls
clus         0   1
  subtype1 194   1
  subtype2 588   6
  subtype3  57   2
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  194    1
  subtype2  588    6
  subtype3   57    2
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      194      588       57
  MALE          1        6        2
D10V4, binary
          cls
clus         0   1
  subtype1  53 142
  subtype2 147 447
  subtype3  10  49
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   53  142
  subtype2  147  447
  subtype3   10   49
     clus
vv    subtype1 subtype2 subtype3
  NO        53      147       10
  YES      142      447       49
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 179   4  12
  subtype2        2 526   8  58
  subtype3        0  51   2   6
D10V5, multiclass
          vv
clus        N0 N0 (I+) N0 (I-) N0 (MOL+)  N1 N1A N1B N1C N1MI  N2 N2A  N3 N3A
  subtype1  66       5      36         0  24  18   7   1    1  11  11   2   8
  subtype2 160      17      84         1  70 101  23   1   21  33  36  15  20
  subtype3  22       0       8         0   7   7   2   0    1   6   3   1   1
          vv
clus       N3B N3C  NX
  subtype1   1   1   3
  subtype2   1   0  11
  subtype3   0   0   1
D10V6, multiclass
D10V7, continuous
D10V8, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      13       15        1        1        81        38         0
  subtype2      57       44        6        7       184       137         2
  subtype3       2        5        0        0        24        14         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         23          3         11        4         0       4
  subtype2         87         21         28        8         1      12
  subtype3         10          0          1        2         0       1
D10V9, multiclass
                                    V1.D 
                         "Time to Death" 
                                      V2 
                                   "AGE" 
                                      V3 
                                "GENDER" 
                                      V4 
"RADIATIONS.RADIATION.REGIMENINDICATION" 
                                      V5 
                    "DISTANT.METASTASIS" 
                                      V6 
                 "LYMPH.NODE.METASTASIS" 
                                      V7 
                 "NUMBER.OF.LYMPH.NODES" 
                                      V8 
                       "TUMOR.STAGECODE" 
                                      V9 
                 "NEOPLASM.DISEASESTAGE" 
> q(save="no")
