GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2904200/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COAD-TP/2904198/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2861336/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2906947/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
GDAC_mergedClustering1 mergedfile | COAD-TP |
GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2900473/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/2859774/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2900477/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/2859772/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2860145/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/2860140/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
Execution Times: | |
Submitted: | 09:03:58 09-04-13 |
Completed: | |
Elapsed: | 00 hrs 55 mins 48 secs |
step 1. GDAC_mergedClustering [id: 375078] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2904200/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COAD-TP/2904198/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
mirnacnmf | |
mirnahc | |
copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2861336/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
methlyationhc | |
methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2906947/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
mergedfile | COAD-TP |
PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2900473/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/2859774/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
PredictionUNCTCGA | |
mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2900477/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/2859772/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2860145/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/2860140/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
Output Files: | |
COAD-TP.transferedmergedcluster.txt | |
.lsf.out | |
COAD-TP.mergedcluster.txt | |
stdout.txt |
Execution Times: | |
Submitted: | 09:04:00 09-04-13 |
Completed: | 09:04:31 09-04-13 |
Elapsed: | 00 hrs 00 mins 30 secs |
step 2. GDAC_mergedReport [id: 375080]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
mergedcluster | COAD-TP.transferedmergedcluster.txt |
Output Files: | |
report.html | |
.lsf.out | |
stdout.txt |
Execution Times: | |
Submitted: | 09:04:00 09-04-13 |
Completed: | 09:59:44 09-04-13 |
Elapsed: | 00 hrs 55 mins 44 secs |