# Created: Tue Apr 09 09:04:31 EDT 2013 by cgaadm_deadline
# Job: 375078    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: GDAC_mergedClustering urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
# Parameters: 
#    mrnacnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2904200/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    mrnahc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COAD-TP/2904198/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt
#    mirnacnmf = 
#    mirnahc = 
#    copynumber = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2861336/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    methlyationhc = 
#    methlyationcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2906947/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    mergedfile = COAD-TP
#    PredictionU133aTCGA = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2900473/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    PredictionU133aPhilips = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/2859774/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt
#    PredictionUNCTCGA = 
#    mRNAseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2900477/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    mRNAseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/2859772/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt
#    miRseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/2860145/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    miRseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/2860140/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt
