
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/376192/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/COAD-TP/2909319/1.GDAC_mergedClustering.Finished/COAD-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=COAD-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=COAD-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=425, in cluster file=413, common to both=413
[1]  68 413
[1] "Amp Peak  1(2q33.1) mutation analysis"
[1] 3
  AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE 
                           79                           334 
  AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE 
                           79                           334 
[1] "Amp Peak  2(5p13.2) mutation analysis"
[1] 3
  AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE 
                           81                           332 
  AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE 
                           81                           332 
[1] "Amp Peak  3(5q22.3) mutation analysis"
[1] 3
  AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE 
                           40                           373 
  AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE 
                           40                           373 
[1] "Amp Peak  4(6p21.1) mutation analysis"
[1] 3
  AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE 
                           89                           324 
  AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE 
                           89                           324 
[1] "Amp Peak  5(8p11.23) mutation analysis"
[1] 3
  AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE 
                           144                            269 
  AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE 
                           144                            269 
[1] "Amp Peak  6(8p11.21) mutation analysis"
[1] 3
  AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE 
                           173                            240 
  AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE 
                           173                            240 
[1] "Amp Peak  7(8q12.1) mutation analysis"
[1] 3
  AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE 
                          215                           198 
  AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE 
                          215                           198 
[1] "Amp Peak  8(8q24.21) mutation analysis"
[1] 3
  AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE 
                           239                            174 
  AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE 
                           239                            174 
[1] "Amp Peak  9(11p15.5) mutation analysis"
[1] 3
  AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE 
                            86                            327 
  AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE 
                            86                            327 
[1] "Amp Peak 10(12p13.33) mutation analysis"
[1] 3
  AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE 
                            104                             309 
  AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE 
                            104                             309 
[1] "Amp Peak 11(13q12.13) mutation analysis"
[1] 3
  AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE 
                            250                             163 
  AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE 
                            250                             163 
[1] "Amp Peak 12(13q22.1) mutation analysis"
[1] 3
  AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE 
                           254                            159 
  AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE 
                           254                            159 
[1] "Amp Peak 13(16p11.2) mutation analysis"
[1] 3
  AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE 
                           116                            297 
  AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE 
                           116                            297 
[1] "Amp Peak 14(16q12.1) mutation analysis"
[1] 3
  AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE 
                           102                            311 
  AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE 
                           102                            311 
[1] "Amp Peak 15(17q12) mutation analysis"
[1] 3
  AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE 
                         101                          312 
  AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE 
                         101                          312 
[1] "Amp Peak 16(17q24.1) mutation analysis"
[1] 3
  AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE 
                            92                            321 
  AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE 
                            92                            321 
[1] "Amp Peak 17(19p13.2) mutation analysis"
[1] 3
  AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE 
                            65                            348 
  AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE 
                            65                            348 
[1] "Amp Peak 18(19q13.11) mutation analysis"
[1] 3
  AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE 
                             83                             330 
  AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE 
                             83                             330 
[1] "Amp Peak 19(20p12.3) mutation analysis"
[1] 3
  AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE 
                           184                            229 
  AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE 
                           184                            229 
[1] "Amp Peak 20(20p11.23) mutation analysis"
[1] 3
  AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE 
                            205                             208 
  AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE 
                            205                             208 
[1] "Amp Peak 21(20p11.21) mutation analysis"
[1] 3
  AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE 
                            230                             183 
  AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE 
                            230                             183 
[1] "Amp Peak 22(20q11.21) mutation analysis"
[1] 3
  AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE 
                            296                             117 
  AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE 
                            296                             117 
[1] "Amp Peak 23(20q12) mutation analysis"
[1] 3
  AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE 
                         297                          116 
  AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE 
                         297                          116 
[1] "Amp Peak 24(20q13.32) mutation analysis"
[1] 3
  AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE 
                            300                             113 
  AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE 
                            300                             113 
[1] "Del Peak  1(1p36.11) mutation analysis"
[1] 3
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                           150                            263 
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                           150                            263 
[1] "Del Peak  2(1p33) mutation analysis"
[1] 3
  DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE 
                        107                         306 
  DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE 
                        107                         306 
[1] "Del Peak  3(1p13.1) mutation analysis"
[1] 3
  DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE 
                          103                           310 
  DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE 
                          103                           310 
[1] "Del Peak  4(1q43) mutation analysis"
[1] 3
  DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE 
                         44                         369 
  DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE 
                         44                         369 
[1] "Del Peak  5(2q37.2) mutation analysis"
[1] 3
  DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE 
                           21                           392 
  DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE 
                           21                           392 
[1] "Del Peak  6(3p26.1) mutation analysis"
[1] 3
  DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE 
                           60                           353 
  DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE 
                           60                           353 
[1] "Del Peak  7(3p14.2) mutation analysis"
[1] 3
  DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE 
                           75                           338 
  DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE 
                           75                           338 
[1] "Del Peak  8(3q26.31) mutation analysis"
[1] 3
  DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE 
                            39                            374 
  DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE 
                            39                            374 
[1] "Del Peak  9(4p16.2) mutation analysis"
[1] 3
  DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE 
                          121                           292 
  DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE 
                          121                           292 
[1] "Del Peak 10(4q22.1) mutation analysis"
[1] 3
  DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE 
                          126                           287 
  DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE 
                          126                           287 
[1] "Del Peak 11(4q35.1) mutation analysis"
[1] 3
  DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE 
                          137                           276 
  DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE 
                          137                           276 
[1] "Del Peak 12(5q11.2) mutation analysis"
[1] 3
  DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE 
                           91                           322 
  DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE 
                           91                           322 
[1] "Del Peak 13(5q21.3) mutation analysis"
[1] 3
  DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE 
                          117                           296 
  DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE 
                          117                           296 
[1] "Del Peak 14(5q23.1) mutation analysis"
[1] 3
  DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE 
                          107                           306 
  DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE 
                          107                           306 
[1] "Del Peak 15(6p25.3) mutation analysis"
[1] 3
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           54                           359 
  DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE 
                           54                           359 
[1] "Del Peak 16(6q26) mutation analysis"
[1] 3
  DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE 
                         60                         353 
  DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE 
                         60                         353 
[1] "Del Peak 17(7q31.1) mutation analysis"
[1] 3
  DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE 
                           11                           402 
  DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE 
                           11                           402 
[1] "Del Peak 18(8p23.3) mutation analysis"
[1] 3
  DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE 
                          171                           242 
  DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE 
                          171                           242 
[1] "Del Peak 19(8p22) mutation analysis"
[1] 3
  DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE 
                        185                         228 
  DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE 
                        185                         228 
[1] "Del Peak 20(8p11.22) mutation analysis"
[1] 3
  DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE 
                            80                            333 
  DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE 
                            80                            333 
[1] "Del Peak 21(8p11.21) mutation analysis"
[1] 3
  DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE 
                            43                            370 
  DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE 
                            43                            370 
[1] "Del Peak 22(9p21.3) mutation analysis"
[1] 3
  DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE 
                           56                           357 
  DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE 
                           56                           357 
[1] "Del Peak 23(10p15.3) mutation analysis"
[1] 3
  DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE 
                            68                            345 
  DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE 
                            68                            345 
[1] "Del Peak 24(10q21.1) mutation analysis"
[1] 3
  DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE 
                            82                            331 
  DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE 
                            82                            331 
[1] "Del Peak 25(10q23.31) mutation analysis"
[1] 3
  DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE 
                             94                             319 
  DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE 
                             94                             319 
[1] "Del Peak 26(10q25.2) mutation analysis"
[1] 3
  DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE 
                            93                            320 
  DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE 
                            93                            320 
[1] "Del Peak 27(12p13.2) mutation analysis"
[1] 3
  DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE 
                            44                            369 
  DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE 
                            44                            369 
[1] "Del Peak 28(13q14.13) mutation analysis"
[1] 3
  DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE 
                             18                             395 
  DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE 
                             18                             395 
[1] "Del Peak 29(14q32.11) mutation analysis"
[1] 3
  DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE 
                            133                             280 
  DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE 
                            133                             280 
[1] "Del Peak 30(15q11.2) mutation analysis"
[1] 3
  DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE 
                           160                            253 
  DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE 
                           160                            253 
[1] "Del Peak 31(15q21.1) mutation analysis"
[1] 3
  DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE 
                           151                            262 
  DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE 
                           151                            262 
[1] "Del Peak 32(15q22.33) mutation analysis"
[1] 3
  DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE 
                            145                             268 
  DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE 
                            145                             268 
[1] "Del Peak 33(16p13.3) mutation analysis"
[1] 3
  DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE 
                            45                            368 
  DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE 
                            45                            368 
[1] "Del Peak 34(16q23.1) mutation analysis"
[1] 3
  DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE 
                            49                            364 
  DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE 
                            49                            364 
[1] "Del Peak 35(17p12) mutation analysis"
[1] 3
  DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE 
                         229                          184 
  DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE 
                         229                          184 
[1] "Del Peak 36(17q24.3) mutation analysis"
[1] 3
  DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE 
                            59                            354 
  DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE 
                            59                            354 
[1] "Del Peak 37(18p11.31) mutation analysis"
[1] 3
  DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE 
                            220                             193 
  DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE 
                            220                             193 
[1] "Del Peak 38(18q12.2) mutation analysis"
[1] 3
  DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE 
                           247                            166 
  DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE 
                           247                            166 
[1] "Del Peak 39(18q21.2) mutation analysis"
[1] 3
  DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE 
                           260                            153 
  DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE 
                           260                            153 
[1] "Del Peak 40(18q22.1) mutation analysis"
[1] 3
  DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE 
                           260                            153 
  DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE 
                           260                            153 
[1] "Del Peak 41(19p13.3) mutation analysis"
[1] 3
  DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE 
                            57                            356 
  DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE 
                            57                            356 
[1] "Del Peak 42(20p12.1) mutation analysis"
[1] 3
  DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE 
                            79                            334 
  DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE 
                            79                            334 
[1] "Del Peak 43(21q11.2) mutation analysis"
[1] 3
  DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE 
                           125                            288 
  DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE 
                           125                            288 
[1] "Del Peak 44(22q13.32) mutation analysis"
[1] 3
  DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE 
                            138                             275 
  DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE 
                            138                             275 
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"             "MRNA_CHIERARCHICAL"    "CN_CNMF"              
 [4] "METHLYATION_CNMF"      "RPPA_CNMF"             "RPPA_CHIERARCHICAL"   
 [7] "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"          
[10] "MIRSEQ_CHIERARCHICAL" 

Input Data has 10 rows and 413 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'CN_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'RPPA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'RPPA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "MRNA_CNMF"             "MRNA_CHIERARCHICAL"    "CN_CNMF"              
 [4] "METHLYATION_CNMF"      "RPPA_CNMF"             "RPPA_CHIERARCHICAL"   
 [7] "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"          
[10] "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 413 columns, 0 survival variables, and 10 non-survival variables.
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=4, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(2q33.1) mutation analysis
D1V1, multiclass
        clus
vv       AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE
  CLUS_1                           3                            28
  CLUS_2                          13                            49
  CLUS_3                           2                            28
  CLUS_4                           7                            16
D1V2, multiclass
        clus
vv       AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE
  CLUS_1                           9                            47
  CLUS_2                           4                            40
  CLUS_3                          12                            34
D1V3, multiclass
        clus
vv       AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE
  CLUS_1                          49                           121
  CLUS_2                          18                           169
  CLUS_3                           8                            24
  CLUS_4                           4                            20
D1V4, multiclass
        clus
vv       AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE
  CLUS_1                          26                            79
  CLUS_2                          13                            73
  CLUS_3                          12                            51
D1V5, multiclass
        clus
vv       AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE
  CLUS_1                          16                            50
  CLUS_2                          23                            87
  CLUS_3                           3                             7
  CLUS_4                          11                            67
D1V6, multiclass
        clus
vv       AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE
  CLUS_1                           7                            44
  CLUS_2                           1                            24
  CLUS_3                          29                           111
  CLUS_4                          16                            32
D1V7, multiclass
        clus
vv       AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE
  CLUS_1                           4                            27
  CLUS_2                          21                            38
  CLUS_3                           9                            38
  CLUS_4                           3                            51
D1V8, multiclass
        clus
vv       AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE
  CLUS_1                           3                            46
  CLUS_2                          16                            46
  CLUS_3                          18                            62
D1V9, multiclass
        clus
vv       AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE
  CLUS_1                          28                           146
  CLUS_2                          36                           127
  CLUS_3                          14                            47
D1V10, multiclass
        clus
vv       AMP PEAK  1(2Q33.1) MUTATED AMP PEAK  1(2Q33.1) WILD-TYPE
  CLUS_1                          28                           144
  CLUS_2                           8                            36
  CLUS_3                          42                           140

Clustering(2) Variable = Amp Peak  2(5p13.2) mutation analysis
D2V1, multiclass
        clus
vv       AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE
  CLUS_1                           7                            24
  CLUS_2                          16                            46
  CLUS_3                           3                            27
  CLUS_4                           6                            17
D2V2, multiclass
        clus
vv       AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE
  CLUS_1                          11                            45
  CLUS_2                           8                            36
  CLUS_3                          13                            33
D2V3, multiclass
        clus
vv       AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE
  CLUS_1                          46                           124
  CLUS_2                          20                           167
  CLUS_3                          10                            22
  CLUS_4                           5                            19
D2V4, multiclass
        clus
vv       AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE
  CLUS_1                          14                            91
  CLUS_2                          20                            66
  CLUS_3                          14                            49
D2V5, multiclass
        clus
vv       AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE
  CLUS_1                          11                            55
  CLUS_2                          21                            89
  CLUS_3                           4                             6
  CLUS_4                          15                            63
D2V6, multiclass
        clus
vv       AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE
  CLUS_1                           7                            44
  CLUS_2                           4                            21
  CLUS_3                          28                           112
  CLUS_4                          12                            36
D2V7, multiclass
        clus
vv       AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE
  CLUS_1                           4                            27
  CLUS_2                          16                            43
  CLUS_3                           9                            38
  CLUS_4                           5                            49
D2V8, multiclass
        clus
vv       AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE
  CLUS_1                           4                            45
  CLUS_2                          11                            51
  CLUS_3                          19                            61
D2V9, multiclass
        clus
vv       AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE
  CLUS_1                          34                           140
  CLUS_2                          31                           132
  CLUS_3                          13                            48
D2V10, multiclass
        clus
vv       AMP PEAK  2(5P13.2) MUTATED AMP PEAK  2(5P13.2) WILD-TYPE
  CLUS_1                          36                           136
  CLUS_2                           6                            38
  CLUS_3                          36                           146

Clustering(3) Variable = Amp Peak  3(5q22.3) mutation analysis
D3V1, multiclass
        clus
vv       AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE
  CLUS_1                           1                            30
  CLUS_2                           6                            56
  CLUS_3                           2                            28
  CLUS_4                           2                            21
D3V2, multiclass
        clus
vv       AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE
  CLUS_1                           3                            53
  CLUS_2                           3                            41
  CLUS_3                           5                            41
D3V3, multiclass
        clus
vv       AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE
  CLUS_1                          24                           146
  CLUS_2                          10                           177
  CLUS_3                           3                            29
  CLUS_4                           3                            21
D3V4, multiclass
        clus
vv       AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE
  CLUS_1                          13                            92
  CLUS_2                           9                            77
  CLUS_3                           6                            57
D3V5, multiclass
        clus
vv       AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE
  CLUS_1                           3                            63
  CLUS_2                          10                           100
  CLUS_3                           3                             7
  CLUS_4                          12                            66
D3V6, multiclass
        clus
vv       AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE
  CLUS_1                           6                            45
  CLUS_2                           2                            23
  CLUS_3                          17                           123
  CLUS_4                           3                            45
D3V7, multiclass
        clus
vv       AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE
  CLUS_1                           3                            28
  CLUS_2                          11                            48
  CLUS_3                           4                            43
  CLUS_4                           3                            51
D3V8, multiclass
        clus
vv       AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE
  CLUS_1                           2                            47
  CLUS_2                          10                            52
  CLUS_3                           9                            71
D3V9, multiclass
        clus
vv       AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE
  CLUS_1                          15                           159
  CLUS_2                          18                           145
  CLUS_3                           7                            54
D3V10, multiclass
        clus
vv       AMP PEAK  3(5Q22.3) MUTATED AMP PEAK  3(5Q22.3) WILD-TYPE
  CLUS_1                          18                           154
  CLUS_2                           5                            39
  CLUS_3                          17                           165

Clustering(4) Variable = Amp Peak  4(6p21.1) mutation analysis
D4V1, multiclass
        clus
vv       AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE
  CLUS_1                           5                            26
  CLUS_2                          17                            45
  CLUS_3                           2                            28
  CLUS_4                           6                            17
D4V2, multiclass
        clus
vv       AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE
  CLUS_1                           8                            48
  CLUS_2                           4                            40
  CLUS_3                          18                            28
D4V3, multiclass
        clus
vv       AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE
  CLUS_1                          61                           109
  CLUS_2                          16                           171
  CLUS_3                           8                            24
  CLUS_4                           4                            20
D4V4, multiclass
        clus
vv       AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE
  CLUS_1                          29                            76
  CLUS_2                          14                            72
  CLUS_3                          14                            49
D4V5, multiclass
        clus
vv       AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE
  CLUS_1                          19                            47
  CLUS_2                          23                            87
  CLUS_3                           3                             7
  CLUS_4                          18                            60
D4V6, multiclass
        clus
vv       AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE
  CLUS_1                           6                            45
  CLUS_2                           4                            21
  CLUS_3                          35                           105
  CLUS_4                          18                            30
D4V7, multiclass
        clus
vv       AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE
  CLUS_1                           7                            24
  CLUS_2                          16                            43
  CLUS_3                          13                            34
  CLUS_4                           3                            51
D4V8, multiclass
        clus
vv       AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE
  CLUS_1                           4                            45
  CLUS_2                          14                            48
  CLUS_3                          21                            59
D4V9, multiclass
        clus
vv       AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE
  CLUS_1                          35                           139
  CLUS_2                          38                           125
  CLUS_3                          13                            48
D4V10, multiclass
        clus
vv       AMP PEAK  4(6P21.1) MUTATED AMP PEAK  4(6P21.1) WILD-TYPE
  CLUS_1                          35                           137
  CLUS_2                           6                            38
  CLUS_3                          45                           137

Clustering(5) Variable = Amp Peak  5(8p11.23) mutation analysis
D5V1, multiclass
        clus
vv       AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE
  CLUS_1                            6                             25
  CLUS_2                           22                             40
  CLUS_3                            8                             22
  CLUS_4                            7                             16
D5V2, multiclass
        clus
vv       AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE
  CLUS_1                           17                             39
  CLUS_2                            9                             35
  CLUS_3                           17                             29
D5V3, multiclass
        clus
vv       AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE
  CLUS_1                           56                            114
  CLUS_2                           47                            140
  CLUS_3                           17                             15
  CLUS_4                           24                              0
D5V4, multiclass
        clus
vv       AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE
  CLUS_1                           41                             64
  CLUS_2                           33                             53
  CLUS_3                           22                             41
D5V5, multiclass
        clus
vv       AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE
  CLUS_1                           23                             43
  CLUS_2                           45                             65
  CLUS_3                            3                              7
  CLUS_4                           24                             54
D5V6, multiclass
        clus
vv       AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE
  CLUS_1                           14                             37
  CLUS_2                           11                             14
  CLUS_3                           51                             89
  CLUS_4                           19                             29
D5V7, multiclass
        clus
vv       AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE
  CLUS_1                            9                             22
  CLUS_2                           28                             31
  CLUS_3                           14                             33
  CLUS_4                           21                             33
D5V8, multiclass
        clus
vv       AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE
  CLUS_1                           20                             29
  CLUS_2                           24                             38
  CLUS_3                           28                             52
D5V9, multiclass
        clus
vv       AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE
  CLUS_1                           56                            118
  CLUS_2                           66                             97
  CLUS_3                           18                             43
D5V10, multiclass
        clus
vv       AMP PEAK  5(8P11.23) MUTATED AMP PEAK  5(8P11.23) WILD-TYPE
  CLUS_1                           57                            115
  CLUS_2                           21                             23
  CLUS_3                           62                            120

Clustering(6) Variable = Amp Peak  6(8p11.21) mutation analysis
D6V1, multiclass
        clus
vv       AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE
  CLUS_1                            8                             23
  CLUS_2                           25                             37
  CLUS_3                           10                             20
  CLUS_4                           11                             12
D6V2, multiclass
        clus
vv       AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE
  CLUS_1                           20                             36
  CLUS_2                           12                             32
  CLUS_3                           22                             24
D6V3, multiclass
        clus
vv       AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE
  CLUS_1                           75                             95
  CLUS_2                           55                            132
  CLUS_3                           21                             11
  CLUS_4                           22                              2
D6V4, multiclass
        clus
vv       AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE
  CLUS_1                           49                             56
  CLUS_2                           37                             49
  CLUS_3                           28                             35
D6V5, multiclass
        clus
vv       AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE
  CLUS_1                           33                             33
  CLUS_2                           47                             63
  CLUS_3                            6                              4
  CLUS_4                           29                             49
D6V6, multiclass
        clus
vv       AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE
  CLUS_1                           18                             33
  CLUS_2                           13                             12
  CLUS_3                           55                             85
  CLUS_4                           29                             19
D6V7, multiclass
        clus
vv       AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE
  CLUS_1                           11                             20
  CLUS_2                           31                             28
  CLUS_3                           21                             26
  CLUS_4                           22                             32
D6V8, multiclass
        clus
vv       AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE
  CLUS_1                           21                             28
  CLUS_2                           25                             37
  CLUS_3                           39                             41
D6V9, multiclass
        clus
vv       AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE
  CLUS_1                           68                            106
  CLUS_2                           74                             89
  CLUS_3                           26                             35
D6V10, multiclass
        clus
vv       AMP PEAK  6(8P11.21) MUTATED AMP PEAK  6(8P11.21) WILD-TYPE
  CLUS_1                           69                            103
  CLUS_2                           24                             20
  CLUS_3                           75                            107

Clustering(7) Variable = Amp Peak  7(8q12.1) mutation analysis
D7V1, multiclass
        clus
vv       AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE
  CLUS_1                          14                            17
  CLUS_2                          30                            32
  CLUS_3                          10                            20
  CLUS_4                          15                             8
D7V2, multiclass
        clus
vv       AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE
  CLUS_1                          27                            29
  CLUS_2                          15                            29
  CLUS_3                          27                            19
D7V3, multiclass
        clus
vv       AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE
  CLUS_1                         106                            64
  CLUS_2                          64                           123
  CLUS_3                          23                             9
  CLUS_4                          22                             2
D7V4, multiclass
        clus
vv       AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE
  CLUS_1                          68                            37
  CLUS_2                          40                            46
  CLUS_3                          34                            29
D7V5, multiclass
        clus
vv       AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE
  CLUS_1                          42                            24
  CLUS_2                          58                            52
  CLUS_3                           6                             4
  CLUS_4                          35                            43
D7V6, multiclass
        clus
vv       AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE
  CLUS_1                          20                            31
  CLUS_2                          13                            12
  CLUS_3                          72                            68
  CLUS_4                          36                            12
D7V7, multiclass
        clus
vv       AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE
  CLUS_1                          14                            17
  CLUS_2                          41                            18
  CLUS_3                          25                            22
  CLUS_4                          22                            32
D7V8, multiclass
        clus
vv       AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE
  CLUS_1                          21                            28
  CLUS_2                          36                            26
  CLUS_3                          45                            35
D7V9, multiclass
        clus
vv       AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE
  CLUS_1                          85                            89
  CLUS_2                          95                            68
  CLUS_3                          28                            33
D7V10, multiclass
        clus
vv       AMP PEAK  7(8Q12.1) MUTATED AMP PEAK  7(8Q12.1) WILD-TYPE
  CLUS_1                          87                            85
  CLUS_2                          28                            16
  CLUS_3                          93                            89

Clustering(8) Variable = Amp Peak  8(8q24.21) mutation analysis
D8V1, multiclass
        clus
vv       AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE
  CLUS_1                           16                             15
  CLUS_2                           34                             28
  CLUS_3                           12                             18
  CLUS_4                           16                              7
D8V2, multiclass
        clus
vv       AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE
  CLUS_1                           29                             27
  CLUS_2                           19                             25
  CLUS_3                           30                             16
D8V3, multiclass
        clus
vv       AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE
  CLUS_1                          119                             51
  CLUS_2                           73                            114
  CLUS_3                           23                              9
  CLUS_4                           24                              0
D8V4, multiclass
        clus
vv       AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE
  CLUS_1                           75                             30
  CLUS_2                           43                             43
  CLUS_3                           38                             25
D8V5, multiclass
        clus
vv       AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE
  CLUS_1                           45                             21
  CLUS_2                           64                             46
  CLUS_3                            6                              4
  CLUS_4                           41                             37
D8V6, multiclass
        clus
vv       AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE
  CLUS_1                           24                             27
  CLUS_2                           14                             11
  CLUS_3                           81                             59
  CLUS_4                           37                             11
D8V7, multiclass
        clus
vv       AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE
  CLUS_1                           17                             14
  CLUS_2                           46                             13
  CLUS_3                           26                             21
  CLUS_4                           26                             28
D8V8, multiclass
        clus
vv       AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE
  CLUS_1                           26                             23
  CLUS_2                           40                             22
  CLUS_3                           49                             31
D8V9, multiclass
        clus
vv       AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE
  CLUS_1                           97                             77
  CLUS_2                          101                             62
  CLUS_3                           33                             28
D8V10, multiclass
        clus
vv       AMP PEAK  8(8Q24.21) MUTATED AMP PEAK  8(8Q24.21) WILD-TYPE
  CLUS_1                           97                             75
  CLUS_2                           31                             13
  CLUS_3                          103                             79

Clustering(9) Variable = Amp Peak  9(11p15.5) mutation analysis
D9V1, multiclass
        clus
vv       AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE
  CLUS_1                            1                             30
  CLUS_2                           17                             45
  CLUS_3                            3                             27
  CLUS_4                           13                             10
D9V2, multiclass
        clus
vv       AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE
  CLUS_1                           14                             42
  CLUS_2                            2                             42
  CLUS_3                           18                             28
D9V3, multiclass
        clus
vv       AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE
  CLUS_1                           54                            116
  CLUS_2                           17                            170
  CLUS_3                           14                             18
  CLUS_4                            1                             23
D9V4, multiclass
        clus
vv       AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE
  CLUS_1                           31                             74
  CLUS_2                            7                             79
  CLUS_3                           10                             53
D9V5, multiclass
        clus
vv       AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE
  CLUS_1                           17                             49
  CLUS_2                           27                             83
  CLUS_3                            2                              8
  CLUS_4                            9                             69
D9V6, multiclass
        clus
vv       AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE
  CLUS_1                            3                             48
  CLUS_2                            6                             19
  CLUS_3                           28                            112
  CLUS_4                           18                             30
D9V7, multiclass
        clus
vv       AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE
  CLUS_1                            4                             27
  CLUS_2                           17                             42
  CLUS_3                           10                             37
  CLUS_4                            2                             52
D9V8, multiclass
        clus
vv       AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE
  CLUS_1                            2                             47
  CLUS_2                           15                             47
  CLUS_3                           16                             64
D9V9, multiclass
        clus
vv       AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE
  CLUS_1                           44                            130
  CLUS_2                           32                            131
  CLUS_3                            8                             53
D9V10, multiclass
        clus
vv       AMP PEAK  9(11P15.5) MUTATED AMP PEAK  9(11P15.5) WILD-TYPE
  CLUS_1                           43                            129
  CLUS_2                            6                             38
  CLUS_3                           35                            147

Clustering(10) Variable = Amp Peak 10(12p13.33) mutation analysis
D10V1, multiclass
        clus
vv       AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE
  CLUS_1                             9                              22
  CLUS_2                            11                              51
  CLUS_3                             9                              21
  CLUS_4                             5                              18
D10V2, multiclass
        clus
vv       AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE
  CLUS_1                            14                              42
  CLUS_2                             9                              35
  CLUS_3                            11                              35
D10V3, multiclass
        clus
vv       AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE
  CLUS_1                            32                             138
  CLUS_2                            54                             133
  CLUS_3                             9                              23
  CLUS_4                             9                              15
D10V4, multiclass
        clus
vv       AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE
  CLUS_1                            21                              84
  CLUS_2                            26                              60
  CLUS_3                            17                              46
D10V5, multiclass
        clus
vv       AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE
  CLUS_1                            15                              51
  CLUS_2                            24                              86
  CLUS_3                             4                               6
  CLUS_4                            21                              57
D10V6, multiclass
        clus
vv       AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE
  CLUS_1                            15                              36
  CLUS_2                             7                              18
  CLUS_3                            31                             109
  CLUS_4                            11                              37
D10V7, multiclass
        clus
vv       AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE
  CLUS_1                             4                              27
  CLUS_2                            18                              41
  CLUS_3                            12                              35
  CLUS_4                            14                              40
D10V8, multiclass
        clus
vv       AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE
  CLUS_1                            12                              37
  CLUS_2                            15                              47
  CLUS_3                            21                              59
D10V9, multiclass
        clus
vv       AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE
  CLUS_1                            44                             130
  CLUS_2                            46                             117
  CLUS_3                            11                              50
D10V10, multiclass
        clus
vv       AMP PEAK 10(12P13.33) MUTATED AMP PEAK 10(12P13.33) WILD-TYPE
  CLUS_1                            44                             128
  CLUS_2                            16                              28
  CLUS_3                            41                             141

Clustering(11) Variable = Amp Peak 11(13q12.13) mutation analysis
D11V1, multiclass
        clus
vv       AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE
  CLUS_1                            14                              17
  CLUS_2                            52                              10
  CLUS_3                             8                              22
  CLUS_4                            18                               5
D11V2, multiclass
        clus
vv       AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE
  CLUS_1                            39                              17
  CLUS_2                            15                              29
  CLUS_3                            38                               8
D11V3, multiclass
        clus
vv       AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE
  CLUS_1                           158                              12
  CLUS_2                            57                             130
  CLUS_3                            18                              14
  CLUS_4                            17                               7
D11V4, multiclass
        clus
vv       AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE
  CLUS_1                            79                              26
  CLUS_2                            42                              44
  CLUS_3                            33                              30
D11V5, multiclass
        clus
vv       AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE
  CLUS_1                            42                              24
  CLUS_2                            75                              35
  CLUS_3                             7                               3
  CLUS_4                            42                              36
D11V6, multiclass
        clus
vv       AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE
  CLUS_1                            22                              29
  CLUS_2                            15                              10
  CLUS_3                            93                              47
  CLUS_4                            36                              12
D11V7, multiclass
        clus
vv       AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE
  CLUS_1                            22                               9
  CLUS_2                            46                              13
  CLUS_3                            26                              21
  CLUS_4                            16                              38
D11V8, multiclass
        clus
vv       AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE
  CLUS_1                            16                              33
  CLUS_2                            43                              19
  CLUS_3                            51                              29
D11V9, multiclass
        clus
vv       AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE
  CLUS_1                           107                              67
  CLUS_2                           103                              60
  CLUS_3                            33                              28
D11V10, multiclass
        clus
vv       AMP PEAK 11(13Q12.13) MUTATED AMP PEAK 11(13Q12.13) WILD-TYPE
  CLUS_1                           108                              64
  CLUS_2                            27                              17
  CLUS_3                           108                              74

Clustering(12) Variable = Amp Peak 12(13q22.1) mutation analysis
D12V1, multiclass
        clus
vv       AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE
  CLUS_1                           15                             16
  CLUS_2                           49                             13
  CLUS_3                           10                             20
  CLUS_4                           17                              6
D12V2, multiclass
        clus
vv       AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE
  CLUS_1                           38                             18
  CLUS_2                           16                             28
  CLUS_3                           37                              9
D12V3, multiclass
        clus
vv       AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE
  CLUS_1                          158                             12
  CLUS_2                           63                            124
  CLUS_3                           17                             15
  CLUS_4                           16                              8
D12V4, multiclass
        clus
vv       AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE
  CLUS_1                           80                             25
  CLUS_2                           45                             41
  CLUS_3                           33                             30
D12V5, multiclass
        clus
vv       AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE
  CLUS_1                           42                             24
  CLUS_2                           73                             37
  CLUS_3                            7                              3
  CLUS_4                           42                             36
D12V6, multiclass
        clus
vv       AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE
  CLUS_1                           22                             29
  CLUS_2                           15                             10
  CLUS_3                           91                             49
  CLUS_4                           36                             12
D12V7, multiclass
        clus
vv       AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE
  CLUS_1                           22                              9
  CLUS_2                           49                             10
  CLUS_3                           25                             22
  CLUS_4                           19                             35
D12V8, multiclass
        clus
vv       AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE
  CLUS_1                           17                             32
  CLUS_2                           46                             16
  CLUS_3                           52                             28
D12V9, multiclass
        clus
vv       AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE
  CLUS_1                          106                             68
  CLUS_2                          107                             56
  CLUS_3                           33                             28
D12V10, multiclass
        clus
vv       AMP PEAK 12(13Q22.1) MUTATED AMP PEAK 12(13Q22.1) WILD-TYPE
  CLUS_1                          106                             66
  CLUS_2                           28                             16
  CLUS_3                          112                             70

Clustering(13) Variable = Amp Peak 13(16p11.2) mutation analysis
D13V1, multiclass
        clus
vv       AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE
  CLUS_1                            5                             26
  CLUS_2                           23                             39
  CLUS_3                            3                             27
  CLUS_4                           13                             10
D13V2, multiclass
        clus
vv       AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE
  CLUS_1                           13                             43
  CLUS_2                            7                             37
  CLUS_3                           24                             22
D13V3, multiclass
        clus
vv       AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE
  CLUS_1                           88                             82
  CLUS_2                           18                            169
  CLUS_3                            8                             24
  CLUS_4                            2                             22
D13V4, multiclass
        clus
vv       AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE
  CLUS_1                           37                             68
  CLUS_2                           15                             71
  CLUS_3                           18                             45
D13V5, multiclass
        clus
vv       AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE
  CLUS_1                           22                             44
  CLUS_2                           34                             76
  CLUS_3                            6                              4
  CLUS_4                           18                             60
D13V6, multiclass
        clus
vv       AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE
  CLUS_1                            9                             42
  CLUS_2                            2                             23
  CLUS_3                           48                             92
  CLUS_4                           21                             27
D13V7, multiclass
        clus
vv       AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE
  CLUS_1                            8                             23
  CLUS_2                           24                             35
  CLUS_3                           13                             34
  CLUS_4                            4                             50
D13V8, multiclass
        clus
vv       AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE
  CLUS_1                            5                             44
  CLUS_2                           17                             45
  CLUS_3                           27                             53
D13V9, multiclass
        clus
vv       AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE
  CLUS_1                           47                            127
  CLUS_2                           49                            114
  CLUS_3                           16                             45
D13V10, multiclass
        clus
vv       AMP PEAK 13(16P11.2) MUTATED AMP PEAK 13(16P11.2) WILD-TYPE
  CLUS_1                           51                            121
  CLUS_2                           11                             33
  CLUS_3                           50                            132

Clustering(14) Variable = Amp Peak 14(16q12.1) mutation analysis
D14V1, multiclass
        clus
vv       AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE
  CLUS_1                            3                             28
  CLUS_2                           21                             41
  CLUS_3                            2                             28
  CLUS_4                           13                             10
D14V2, multiclass
        clus
vv       AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE
  CLUS_1                           13                             43
  CLUS_2                            4                             40
  CLUS_3                           22                             24
D14V3, multiclass
        clus
vv       AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE
  CLUS_1                           82                             88
  CLUS_2                           12                            175
  CLUS_3                            7                             25
  CLUS_4                            1                             23
D14V4, multiclass
        clus
vv       AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE
  CLUS_1                           31                             74
  CLUS_2                           13                             73
  CLUS_3                           17                             46
D14V5, multiclass
        clus
vv       AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE
  CLUS_1                           19                             47
  CLUS_2                           31                             79
  CLUS_3                            4                              6
  CLUS_4                           16                             62
D14V6, multiclass
        clus
vv       AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE
  CLUS_1                            8                             43
  CLUS_2                            2                             23
  CLUS_3                           42                             98
  CLUS_4                           18                             30
D14V7, multiclass
        clus
vv       AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE
  CLUS_1                            7                             24
  CLUS_2                           21                             38
  CLUS_3                           13                             34
  CLUS_4                            3                             51
D14V8, multiclass
        clus
vv       AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE
  CLUS_1                            4                             45
  CLUS_2                           13                             49
  CLUS_3                           27                             53
D14V9, multiclass
        clus
vv       AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE
  CLUS_1                           41                            133
  CLUS_2                           42                            121
  CLUS_3                           15                             46
D14V10, multiclass
        clus
vv       AMP PEAK 14(16Q12.1) MUTATED AMP PEAK 14(16Q12.1) WILD-TYPE
  CLUS_1                           44                            128
  CLUS_2                           10                             34
  CLUS_3                           44                            138

Clustering(15) Variable = Amp Peak 15(17q12) mutation analysis
D15V1, multiclass
        clus
vv       AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE
  CLUS_1                          4                           27
  CLUS_2                         20                           42
  CLUS_3                          4                           26
  CLUS_4                          6                           17
D15V2, multiclass
        clus
vv       AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE
  CLUS_1                         11                           45
  CLUS_2                          7                           37
  CLUS_3                         16                           30
D15V3, multiclass
        clus
vv       AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE
  CLUS_1                         62                          108
  CLUS_2                         23                          164
  CLUS_3                          8                           24
  CLUS_4                          8                           16
D15V4, multiclass
        clus
vv       AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE
  CLUS_1                         36                           69
  CLUS_2                         18                           68
  CLUS_3                         10                           53
D15V5, multiclass
        clus
vv       AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE
  CLUS_1                         16                           50
  CLUS_2                         30                           80
  CLUS_3                          3                            7
  CLUS_4                         16                           62
D15V6, multiclass
        clus
vv       AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE
  CLUS_1                          7                           44
  CLUS_2                          0                           25
  CLUS_3                         41                           99
  CLUS_4                         17                           31
D15V7, multiclass
        clus
vv       AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE
  CLUS_1                          8                           23
  CLUS_2                         26                           33
  CLUS_3                          6                           41
  CLUS_4                          5                           49
D15V8, multiclass
        clus
vv       AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE
  CLUS_1                          6                           43
  CLUS_2                         22                           40
  CLUS_3                         17                           63
D15V9, multiclass
        clus
vv       AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE
  CLUS_1                         43                          131
  CLUS_2                         49                          114
  CLUS_3                          7                           54
D15V10, multiclass
        clus
vv       AMP PEAK 15(17Q12) MUTATED AMP PEAK 15(17Q12) WILD-TYPE
  CLUS_1                         42                          130
  CLUS_2                         11                           33
  CLUS_3                         46                          136

Clustering(16) Variable = Amp Peak 16(17q24.1) mutation analysis
D16V1, multiclass
        clus
vv       AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE
  CLUS_1                            2                             29
  CLUS_2                           18                             44
  CLUS_3                            4                             26
  CLUS_4                            5                             18
D16V2, multiclass
        clus
vv       AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE
  CLUS_1                            9                             47
  CLUS_2                            4                             40
  CLUS_3                           16                             30
D16V3, multiclass
        clus
vv       AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE
  CLUS_1                           59                            111
  CLUS_2                           17                            170
  CLUS_3                            8                             24
  CLUS_4                            8                             16
D16V4, multiclass
        clus
vv       AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE
  CLUS_1                           34                             71
  CLUS_2                           18                             68
  CLUS_3                            8                             55
D16V5, multiclass
        clus
vv       AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE
  CLUS_1                           14                             52
  CLUS_2                           30                             80
  CLUS_3                            2                              8
  CLUS_4                           14                             64
D16V6, multiclass
        clus
vv       AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE
  CLUS_1                            7                             44
  CLUS_2                            0                             25
  CLUS_3                           37                            103
  CLUS_4                           16                             32
D16V7, multiclass
        clus
vv       AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE
  CLUS_1                            9                             22
  CLUS_2                           26                             33
  CLUS_3                            4                             43
  CLUS_4                            5                             49
D16V8, multiclass
        clus
vv       AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE
  CLUS_1                            5                             44
  CLUS_2                           23                             39
  CLUS_3                           16                             64
D16V9, multiclass
        clus
vv       AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE
  CLUS_1                           37                            137
  CLUS_2                           47                            116
  CLUS_3                            5                             56
D16V10, multiclass
        clus
vv       AMP PEAK 16(17Q24.1) MUTATED AMP PEAK 16(17Q24.1) WILD-TYPE
  CLUS_1                           36                            136
  CLUS_2                           11                             33
  CLUS_3                           42                            140

Clustering(17) Variable = Amp Peak 17(19p13.2) mutation analysis
D17V1, multiclass
        clus
vv       AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE
  CLUS_1                            1                             30
  CLUS_2                           13                             49
  CLUS_3                            3                             27
  CLUS_4                            1                             22
D17V2, multiclass
        clus
vv       AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE
  CLUS_1                           10                             46
  CLUS_2                            1                             43
  CLUS_3                            7                             39
D17V3, multiclass
        clus
vv       AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE
  CLUS_1                           39                            131
  CLUS_2                           13                            174
  CLUS_3                            8                             24
  CLUS_4                            5                             19
D17V4, multiclass
        clus
vv       AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE
  CLUS_1                           24                             81
  CLUS_2                           13                             73
  CLUS_3                            9                             54
D17V5, multiclass
        clus
vv       AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE
  CLUS_1                           13                             53
  CLUS_2                           18                             92
  CLUS_3                            1                              9
  CLUS_4                           13                             65
D17V6, multiclass
        clus
vv       AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE
  CLUS_1                            8                             43
  CLUS_2                            2                             23
  CLUS_3                           25                            115
  CLUS_4                           10                             38
D17V7, multiclass
        clus
vv       AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE
  CLUS_1                            7                             24
  CLUS_2                           11                             48
  CLUS_3                            7                             40
  CLUS_4                            6                             48
D17V8, multiclass
        clus
vv       AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE
  CLUS_1                            7                             42
  CLUS_2                            8                             54
  CLUS_3                           16                             64
D17V9, multiclass
        clus
vv       AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE
  CLUS_1                           22                            152
  CLUS_2                           29                            134
  CLUS_3                           13                             48
D17V10, multiclass
        clus
vv       AMP PEAK 17(19P13.2) MUTATED AMP PEAK 17(19P13.2) WILD-TYPE
  CLUS_1                           23                            149
  CLUS_2                            7                             37
  CLUS_3                           34                            148

Clustering(18) Variable = Amp Peak 18(19q13.11) mutation analysis
D18V1, multiclass
        clus
vv       AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE
  CLUS_1                             2                              29
  CLUS_2                            13                              49
  CLUS_3                             6                              24
  CLUS_4                             4                              19
D18V2, multiclass
        clus
vv       AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE
  CLUS_1                            12                              44
  CLUS_2                             2                              42
  CLUS_3                            11                              35
D18V3, multiclass
        clus
vv       AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE
  CLUS_1                            43                             127
  CLUS_2                            23                             164
  CLUS_3                            10                              22
  CLUS_4                             7                              17
D18V4, multiclass
        clus
vv       AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE
  CLUS_1                            27                              78
  CLUS_2                            17                              69
  CLUS_3                            12                              51
D18V5, multiclass
        clus
vv       AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE
  CLUS_1                            17                              49
  CLUS_2                            23                              87
  CLUS_3                             4                               6
  CLUS_4                            13                              65
D18V6, multiclass
        clus
vv       AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE
  CLUS_1                             9                              42
  CLUS_2                             5                              20
  CLUS_3                            31                             109
  CLUS_4                            12                              36
D18V7, multiclass
        clus
vv       AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE
  CLUS_1                             8                              23
  CLUS_2                            15                              44
  CLUS_3                            12                              35
  CLUS_4                             5                              49
D18V8, multiclass
        clus
vv       AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE
  CLUS_1                             7                              42
  CLUS_2                            11                              51
  CLUS_3                            22                              58
D18V9, multiclass
        clus
vv       AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE
  CLUS_1                            32                             142
  CLUS_2                            33                             130
  CLUS_3                            16                              45
D18V10, multiclass
        clus
vv       AMP PEAK 18(19Q13.11) MUTATED AMP PEAK 18(19Q13.11) WILD-TYPE
  CLUS_1                            31                             141
  CLUS_2                             8                              36
  CLUS_3                            42                             140

Clustering(19) Variable = Amp Peak 19(20p12.3) mutation analysis
D19V1, multiclass
        clus
vv       AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE
  CLUS_1                           10                             21
  CLUS_2                           33                             29
  CLUS_3                           10                             20
  CLUS_4                           18                              5
D19V2, multiclass
        clus
vv       AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE
  CLUS_1                           33                             23
  CLUS_2                           11                             33
  CLUS_3                           27                             19
D19V3, multiclass
        clus
vv       AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE
  CLUS_1                           83                             87
  CLUS_2                           58                            129
  CLUS_3                           31                              1
  CLUS_4                           12                             12
D19V4, multiclass
        clus
vv       AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE
  CLUS_1                           49                             56
  CLUS_2                           36                             50
  CLUS_3                           23                             40
D19V5, multiclass
        clus
vv       AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE
  CLUS_1                           37                             29
  CLUS_2                           43                             67
  CLUS_3                            4                              6
  CLUS_4                           26                             52
D19V6, multiclass
        clus
vv       AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE
  CLUS_1                           19                             32
  CLUS_2                           12                             13
  CLUS_3                           54                             86
  CLUS_4                           25                             23
D19V7, multiclass
        clus
vv       AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE
  CLUS_1                           13                             18
  CLUS_2                           28                             31
  CLUS_3                           20                             27
  CLUS_4                           12                             42
D19V8, multiclass
        clus
vv       AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE
  CLUS_1                           10                             39
  CLUS_2                           27                             35
  CLUS_3                           36                             44
D19V9, multiclass
        clus
vv       AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE
  CLUS_1                           82                             92
  CLUS_2                           68                             95
  CLUS_3                           27                             34
D19V10, multiclass
        clus
vv       AMP PEAK 19(20P12.3) MUTATED AMP PEAK 19(20P12.3) WILD-TYPE
  CLUS_1                           84                             88
  CLUS_2                           21                             23
  CLUS_3                           72                            110

Clustering(20) Variable = Amp Peak 20(20p11.23) mutation analysis
D20V1, multiclass
        clus
vv       AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE
  CLUS_1                            11                              20
  CLUS_2                            35                              27
  CLUS_3                            11                              19
  CLUS_4                            16                               7
D20V2, multiclass
        clus
vv       AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE
  CLUS_1                            36                              20
  CLUS_2                            12                              32
  CLUS_3                            25                              21
D20V3, multiclass
        clus
vv       AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE
  CLUS_1                           102                              68
  CLUS_2                            58                             129
  CLUS_3                            32                               0
  CLUS_4                            13                              11
D20V4, multiclass
        clus
vv       AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE
  CLUS_1                            60                              45
  CLUS_2                            38                              48
  CLUS_3                            27                              36
D20V5, multiclass
        clus
vv       AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE
  CLUS_1                            36                              30
  CLUS_2                            51                              59
  CLUS_3                             4                               6
  CLUS_4                            30                              48
D20V6, multiclass
        clus
vv       AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE
  CLUS_1                            20                              31
  CLUS_2                            12                              13
  CLUS_3                            61                              79
  CLUS_4                            28                              20
D20V7, multiclass
        clus
vv       AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE
  CLUS_1                            17                              14
  CLUS_2                            36                              23
  CLUS_3                            19                              28
  CLUS_4                            13                              41
D20V8, multiclass
        clus
vv       AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE
  CLUS_1                            11                              38
  CLUS_2                            34                              28
  CLUS_3                            40                              40
D20V9, multiclass
        clus
vv       AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE
  CLUS_1                            87                              87
  CLUS_2                            85                              78
  CLUS_3                            26                              35
D20V10, multiclass
        clus
vv       AMP PEAK 20(20P11.23) MUTATED AMP PEAK 20(20P11.23) WILD-TYPE
  CLUS_1                            89                              83
  CLUS_2                            26                              18
  CLUS_3                            83                              99

Clustering(21) Variable = Amp Peak 21(20p11.21) mutation analysis
D21V1, multiclass
        clus
vv       AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE
  CLUS_1                            11                              20
  CLUS_2                            41                              21
  CLUS_3                            11                              19
  CLUS_4                            18                               5
D21V2, multiclass
        clus
vv       AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE
  CLUS_1                            38                              18
  CLUS_2                            12                              32
  CLUS_3                            31                              15
D21V3, multiclass
        clus
vv       AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE
  CLUS_1                           126                              44
  CLUS_2                            58                             129
  CLUS_3                            32                               0
  CLUS_4                            14                              10
D21V4, multiclass
        clus
vv       AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE
  CLUS_1                            73                              32
  CLUS_2                            40                              46
  CLUS_3                            29                              34
D21V5, multiclass
        clus
vv       AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE
  CLUS_1                            40                              26
  CLUS_2                            62                              48
  CLUS_3                             4                               6
  CLUS_4                            36                              42
D21V6, multiclass
        clus
vv       AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE
  CLUS_1                            21                              30
  CLUS_2                            12                              13
  CLUS_3                            76                              64
  CLUS_4                            33                              15
D21V7, multiclass
        clus
vv       AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE
  CLUS_1                            19                              12
  CLUS_2                            44                              15
  CLUS_3                            24                              23
  CLUS_4                            12                              42
D21V8, multiclass
        clus
vv       AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE
  CLUS_1                            10                              39
  CLUS_2                            40                              22
  CLUS_3                            49                              31
D21V9, multiclass
        clus
vv       AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE
  CLUS_1                            94                              80
  CLUS_2                            99                              64
  CLUS_3                            29                              32
D21V10, multiclass
        clus
vv       AMP PEAK 21(20P11.21) MUTATED AMP PEAK 21(20P11.21) WILD-TYPE
  CLUS_1                            96                              76
  CLUS_2                            28                              16
  CLUS_3                            98                              84

Clustering(22) Variable = Amp Peak 22(20q11.21) mutation analysis
D22V1, multiclass
        clus
vv       AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE
  CLUS_1                            12                              19
  CLUS_2                            59                               3
  CLUS_3                            14                              16
  CLUS_4                            20                               3
D22V2, multiclass
        clus
vv       AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE
  CLUS_1                            50                               6
  CLUS_2                            14                              30
  CLUS_3                            41                               5
D22V3, multiclass
        clus
vv       AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE
  CLUS_1                           167                               3
  CLUS_2                            74                             113
  CLUS_3                            32                               0
  CLUS_4                            23                               1
D22V4, multiclass
        clus
vv       AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE
  CLUS_1                            96                               9
  CLUS_2                            46                              40
  CLUS_3                            40                              23
D22V5, multiclass
        clus
vv       AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE
  CLUS_1                            51                              15
  CLUS_2                            82                              28
  CLUS_3                             7                               3
  CLUS_4                            45                              33
D22V6, multiclass
        clus
vv       AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE
  CLUS_1                            26                              25
  CLUS_2                            14                              11
  CLUS_3                           103                              37
  CLUS_4                            42                               6
D22V7, multiclass
        clus
vv       AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE
  CLUS_1                            23                               8
  CLUS_2                            58                               1
  CLUS_3                            34                              13
  CLUS_4                            17                              37
D22V8, multiclass
        clus
vv       AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE
  CLUS_1                            14                              35
  CLUS_2                            56                               6
  CLUS_3                            62                              18
D22V9, multiclass
        clus
vv       AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE
  CLUS_1                           122                              52
  CLUS_2                           122                              41
  CLUS_3                            41                              20
D22V10, multiclass
        clus
vv       AMP PEAK 22(20Q11.21) MUTATED AMP PEAK 22(20Q11.21) WILD-TYPE
  CLUS_1                           123                              49
  CLUS_2                            32                              12
  CLUS_3                           130                              52

Clustering(23) Variable = Amp Peak 23(20q12) mutation analysis
D23V1, multiclass
        clus
vv       AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE
  CLUS_1                         11                           20
  CLUS_2                         59                            3
  CLUS_3                         13                           17
  CLUS_4                         20                            3
D23V2, multiclass
        clus
vv       AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE
  CLUS_1                         49                            7
  CLUS_2                         13                           31
  CLUS_3                         41                            5
D23V3, multiclass
        clus
vv       AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE
  CLUS_1                        167                            3
  CLUS_2                         75                          112
  CLUS_3                         32                            0
  CLUS_4                         23                            1
D23V4, multiclass
        clus
vv       AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE
  CLUS_1                         96                            9
  CLUS_2                         48                           38
  CLUS_3                         41                           22
D23V5, multiclass
        clus
vv       AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE
  CLUS_1                         53                           13
  CLUS_2                         83                           27
  CLUS_3                          7                            3
  CLUS_4                         44                           34
D23V6, multiclass
        clus
vv       AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE
  CLUS_1                         27                           24
  CLUS_2                         14                           11
  CLUS_3                        103                           37
  CLUS_4                         43                            5
D23V7, multiclass
        clus
vv       AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE
  CLUS_1                         23                            8
  CLUS_2                         58                            1
  CLUS_3                         35                           12
  CLUS_4                         18                           36
D23V8, multiclass
        clus
vv       AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE
  CLUS_1                         15                           34
  CLUS_2                         56                            6
  CLUS_3                         63                           17
D23V9, multiclass
        clus
vv       AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE
  CLUS_1                        121                           53
  CLUS_2                        123                           40
  CLUS_3                         42                           19
D23V10, multiclass
        clus
vv       AMP PEAK 23(20Q12) MUTATED AMP PEAK 23(20Q12) WILD-TYPE
  CLUS_1                        122                           50
  CLUS_2                         32                           12
  CLUS_3                        132                           50

Clustering(24) Variable = Amp Peak 24(20q13.32) mutation analysis
D24V1, multiclass
        clus
vv       AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE
  CLUS_1                            12                              19
  CLUS_2                            59                               3
  CLUS_3                            15                              15
  CLUS_4                            20                               3
D24V2, multiclass
        clus
vv       AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE
  CLUS_1                            51                               5
  CLUS_2                            14                              30
  CLUS_3                            41                               5
D24V3, multiclass
        clus
vv       AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE
  CLUS_1                           168                               2
  CLUS_2                            77                             110
  CLUS_3                            32                               0
  CLUS_4                            23                               1
D24V4, multiclass
        clus
vv       AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE
  CLUS_1                            96                               9
  CLUS_2                            48                              38
  CLUS_3                            41                              22
D24V5, multiclass
        clus
vv       AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE
  CLUS_1                            53                              13
  CLUS_2                            84                              26
  CLUS_3                             7                               3
  CLUS_4                            45                              33
D24V6, multiclass
        clus
vv       AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE
  CLUS_1                            27                              24
  CLUS_2                            14                              11
  CLUS_3                           105                              35
  CLUS_4                            43                               5
D24V7, multiclass
        clus
vv       AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE
  CLUS_1                            23                               8
  CLUS_2                            58                               1
  CLUS_3                            35                              12
  CLUS_4                            18                              36
D24V8, multiclass
        clus
vv       AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE
  CLUS_1                            15                              34
  CLUS_2                            56                               6
  CLUS_3                            63                              17
D24V9, multiclass
        clus
vv       AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE
  CLUS_1                           123                              51
  CLUS_2                           124                              39
  CLUS_3                            42                              19
D24V10, multiclass
        clus
vv       AMP PEAK 24(20Q13.32) MUTATED AMP PEAK 24(20Q13.32) WILD-TYPE
  CLUS_1                           124                              48
  CLUS_2                            33                              11
  CLUS_3                           132                              50

Clustering(25) Variable = Del Peak  1(1p36.11) mutation analysis
D25V1, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            9                             22
  CLUS_2                           35                             27
  CLUS_3                            3                             27
  CLUS_4                           11                             12
D25V2, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           26                             30
  CLUS_2                            9                             35
  CLUS_3                           23                             23
D25V3, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           91                             79
  CLUS_2                           28                            159
  CLUS_3                           22                             10
  CLUS_4                            9                             15
D25V4, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           49                             56
  CLUS_2                           18                             68
  CLUS_3                           20                             43
D25V5, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           22                             44
  CLUS_2                           51                             59
  CLUS_3                            4                              6
  CLUS_4                           20                             58
D25V6, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            8                             43
  CLUS_2                            9                             16
  CLUS_3                           63                             77
  CLUS_4                           17                             31
D25V7, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           11                             20
  CLUS_2                           31                             28
  CLUS_3                           17                             30
  CLUS_4                            8                             46
D25V8, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            7                             42
  CLUS_2                           26                             36
  CLUS_3                           34                             46
D25V9, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           68                            106
  CLUS_2                           58                            105
  CLUS_3                           18                             43
D25V10, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           67                            105
  CLUS_2                            9                             35
  CLUS_3                           68                            114

Clustering(26) Variable = Del Peak  2(1p33) mutation analysis
D26V1, multiclass
        clus
vv       DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE
  CLUS_1                        10                          21
  CLUS_2                        21                          41
  CLUS_3                         2                          28
  CLUS_4                         6                          17
D26V2, multiclass
        clus
vv       DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE
  CLUS_1                        17                          39
  CLUS_2                         9                          35
  CLUS_3                        13                          33
D26V3, multiclass
        clus
vv       DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE
  CLUS_1                        69                         101
  CLUS_2                        20                         167
  CLUS_3                        15                          17
  CLUS_4                         3                          21
D26V4, multiclass
        clus
vv       DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE
  CLUS_1                        35                          70
  CLUS_2                        12                          74
  CLUS_3                        17                          46
D26V5, multiclass
        clus
vv       DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE
  CLUS_1                        17                          49
  CLUS_2                        37                          73
  CLUS_3                         1                           9
  CLUS_4                        15                          63
D26V6, multiclass
        clus
vv       DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE
  CLUS_1                         6                          45
  CLUS_2                         7                          18
  CLUS_3                        45                          95
  CLUS_4                        12                          36
D26V7, multiclass
        clus
vv       DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE
  CLUS_1                         7                          24
  CLUS_2                        25                          34
  CLUS_3                        13                          34
  CLUS_4                         7                          47
D26V8, multiclass
        clus
vv       DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE
  CLUS_1                         6                          43
  CLUS_2                        22                          40
  CLUS_3                        24                          56
D26V9, multiclass
        clus
vv       DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE
  CLUS_1                        46                         128
  CLUS_2                        42                         121
  CLUS_3                        14                          47
D26V10, multiclass
        clus
vv       DEL PEAK  2(1P33) MUTATED DEL PEAK  2(1P33) WILD-TYPE
  CLUS_1                        45                         127
  CLUS_2                         5                          39
  CLUS_3                        52                         130

Clustering(27) Variable = Del Peak  3(1p13.1) mutation analysis
D27V1, multiclass
        clus
vv       DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE
  CLUS_1                           9                            22
  CLUS_2                          20                            42
  CLUS_3                           3                            27
  CLUS_4                           5                            18
D27V2, multiclass
        clus
vv       DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE
  CLUS_1                          17                            39
  CLUS_2                           8                            36
  CLUS_3                          12                            34
D27V3, multiclass
        clus
vv       DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE
  CLUS_1                          66                           104
  CLUS_2                          23                           164
  CLUS_3                          13                            19
  CLUS_4                           1                            23
D27V4, multiclass
        clus
vv       DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE
  CLUS_1                          30                            75
  CLUS_2                          15                            71
  CLUS_3                          16                            47
D27V5, multiclass
        clus
vv       DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE
  CLUS_1                          17                            49
  CLUS_2                          33                            77
  CLUS_3                           2                             8
  CLUS_4                          14                            64
D27V6, multiclass
        clus
vv       DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE
  CLUS_1                           7                            44
  CLUS_2                           7                            18
  CLUS_3                          41                            99
  CLUS_4                          11                            37
D27V7, multiclass
        clus
vv       DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE
  CLUS_1                           7                            24
  CLUS_2                          21                            38
  CLUS_3                          11                            36
  CLUS_4                           8                            46
D27V8, multiclass
        clus
vv       DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE
  CLUS_1                           4                            45
  CLUS_2                          19                            43
  CLUS_3                          24                            56
D27V9, multiclass
        clus
vv       DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE
  CLUS_1                          45                           129
  CLUS_2                          38                           125
  CLUS_3                          15                            46
D27V10, multiclass
        clus
vv       DEL PEAK  3(1P13.1) MUTATED DEL PEAK  3(1P13.1) WILD-TYPE
  CLUS_1                          45                           127
  CLUS_2                           7                            37
  CLUS_3                          46                           136

Clustering(28) Variable = Del Peak  4(1q43) mutation analysis
D28V1, multiclass
        clus
vv       DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE
  CLUS_1                         2                          29
  CLUS_2                         9                          53
  CLUS_3                         0                          30
  CLUS_4                         3                          20
D28V2, multiclass
        clus
vv       DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE
  CLUS_1                         7                          49
  CLUS_2                         2                          42
  CLUS_3                         5                          41
D28V3, multiclass
        clus
vv       DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE
  CLUS_1                        32                         138
  CLUS_2                         7                         180
  CLUS_3                         5                          27
  CLUS_4                         0                          24
D28V4, multiclass
        clus
vv       DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE
  CLUS_1                        16                          89
  CLUS_2                         5                          81
  CLUS_3                         8                          55
D28V5, multiclass
        clus
vv       DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE
  CLUS_1                        10                          56
  CLUS_2                        14                          96
  CLUS_3                         1                           9
  CLUS_4                         6                          72
D28V6, multiclass
        clus
vv       DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE
  CLUS_1                         4                          47
  CLUS_2                         4                          21
  CLUS_3                        18                         122
  CLUS_4                         5                          43
D28V7, multiclass
        clus
vv       DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE
  CLUS_1                         4                          27
  CLUS_2                        13                          46
  CLUS_3                         7                          40
  CLUS_4                         2                          52
D28V8, multiclass
        clus
vv       DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE
  CLUS_1                         1                          48
  CLUS_2                        11                          51
  CLUS_3                        14                          66
D28V9, multiclass
        clus
vv       DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE
  CLUS_1                        14                         160
  CLUS_2                        20                         143
  CLUS_3                         8                          53
D28V10, multiclass
        clus
vv       DEL PEAK  4(1Q43) MUTATED DEL PEAK  4(1Q43) WILD-TYPE
  CLUS_1                        14                         158
  CLUS_2                         4                          40
  CLUS_3                        24                         158

Clustering(29) Variable = Del Peak  5(2q37.2) mutation analysis
D29V1, multiclass
        clus
vv       DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE
  CLUS_1                           1                            30
  CLUS_2                           5                            57
  CLUS_3                           2                            28
  CLUS_4                           1                            22
D29V2, multiclass
        clus
vv       DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE
  CLUS_1                           7                            49
  CLUS_2                           1                            43
  CLUS_3                           1                            45
D29V3, multiclass
        clus
vv       DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE
  CLUS_1                          10                           160
  CLUS_2                           9                           178
  CLUS_3                           1                            31
  CLUS_4                           1                            23
D29V4, multiclass
        clus
vv       DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE
  CLUS_1                           4                           101
  CLUS_2                           4                            82
  CLUS_3                           4                            59
D29V5, multiclass
        clus
vv       DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE
  CLUS_1                           4                            62
  CLUS_2                           7                           103
  CLUS_3                           1                             9
  CLUS_4                           0                            78
D29V6, multiclass
        clus
vv       DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE
  CLUS_1                           1                            50
  CLUS_2                           1                            24
  CLUS_3                           7                           133
  CLUS_4                           3                            45
D29V7, multiclass
        clus
vv       DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE
  CLUS_1                           1                            30
  CLUS_2                           3                            56
  CLUS_3                           3                            44
  CLUS_4                           3                            51
D29V8, multiclass
        clus
vv       DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE
  CLUS_1                           2                            47
  CLUS_2                           1                            61
  CLUS_3                           7                            73
D29V9, multiclass
        clus
vv       DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE
  CLUS_1                          12                           162
  CLUS_2                           6                           157
  CLUS_3                           3                            58
D29V10, multiclass
        clus
vv       DEL PEAK  5(2Q37.2) MUTATED DEL PEAK  5(2Q37.2) WILD-TYPE
  CLUS_1                          12                           160
  CLUS_2                           1                            43
  CLUS_3                           8                           174

Clustering(30) Variable = Del Peak  6(3p26.1) mutation analysis
D30V1, multiclass
        clus
vv       DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE
  CLUS_1                           6                            25
  CLUS_2                          14                            48
  CLUS_3                           1                            29
  CLUS_4                           3                            20
D30V2, multiclass
        clus
vv       DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE
  CLUS_1                          11                            45
  CLUS_2                           4                            40
  CLUS_3                           9                            37
D30V3, multiclass
        clus
vv       DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE
  CLUS_1                          36                           134
  CLUS_2                          14                           173
  CLUS_3                           8                            24
  CLUS_4                           2                            22
D30V4, multiclass
        clus
vv       DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE
  CLUS_1                          17                            88
  CLUS_2                           8                            78
  CLUS_3                          11                            52
D30V5, multiclass
        clus
vv       DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE
  CLUS_1                          11                            55
  CLUS_2                          16                            94
  CLUS_3                           2                             8
  CLUS_4                          13                            65
D30V6, multiclass
        clus
vv       DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE
  CLUS_1                           6                            45
  CLUS_2                           2                            23
  CLUS_3                          24                           116
  CLUS_4                          10                            38
D30V7, multiclass
        clus
vv       DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE
  CLUS_1                           6                            25
  CLUS_2                          10                            49
  CLUS_3                           7                            40
  CLUS_4                           5                            49
D30V8, multiclass
        clus
vv       DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE
  CLUS_1                           3                            46
  CLUS_2                           9                            53
  CLUS_3                          16                            64
D30V9, multiclass
        clus
vv       DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE
  CLUS_1                          26                           148
  CLUS_2                          26                           137
  CLUS_3                           6                            55
D30V10, multiclass
        clus
vv       DEL PEAK  6(3P26.1) MUTATED DEL PEAK  6(3P26.1) WILD-TYPE
  CLUS_1                          25                           147
  CLUS_2                           7                            37
  CLUS_3                          26                           156

Clustering(31) Variable = Del Peak  7(3p14.2) mutation analysis
D31V1, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                           9                            22
  CLUS_2                          15                            47
  CLUS_3                           4                            26
  CLUS_4                           4                            19
D31V2, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          14                            42
  CLUS_2                           8                            36
  CLUS_3                          10                            36
D31V3, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          37                           133
  CLUS_2                          26                           161
  CLUS_3                           7                            25
  CLUS_4                           5                            19
D31V4, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          20                            85
  CLUS_2                          14                            72
  CLUS_3                           9                            54
D31V5, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          11                            55
  CLUS_2                          19                            91
  CLUS_3                           1                             9
  CLUS_4                          15                            63
D31V6, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                           9                            42
  CLUS_2                           2                            23
  CLUS_3                          24                           116
  CLUS_4                          11                            37
D31V7, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                           5                            26
  CLUS_2                          13                            46
  CLUS_3                           7                            40
  CLUS_4                           7                            47
D31V8, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                           6                            43
  CLUS_2                          13                            49
  CLUS_3                          13                            67
D31V9, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          33                           141
  CLUS_2                          32                           131
  CLUS_3                           6                            55
D31V10, multiclass
        clus
vv       DEL PEAK  7(3P14.2) MUTATED DEL PEAK  7(3P14.2) WILD-TYPE
  CLUS_1                          32                           140
  CLUS_2                          10                            34
  CLUS_3                          29                           153

Clustering(32) Variable = Del Peak  8(3q26.31) mutation analysis
D32V1, multiclass
        clus
vv       DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE
  CLUS_1                            3                             28
  CLUS_2                            7                             55
  CLUS_3                            0                             30
  CLUS_4                            4                             19
D32V2, multiclass
        clus
vv       DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE
  CLUS_1                            5                             51
  CLUS_2                            3                             41
  CLUS_3                            6                             40
D32V3, multiclass
        clus
vv       DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE
  CLUS_1                           21                            149
  CLUS_2                           10                            177
  CLUS_3                            7                             25
  CLUS_4                            1                             23
D32V4, multiclass
        clus
vv       DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE
  CLUS_1                           10                             95
  CLUS_2                            6                             80
  CLUS_3                            8                             55
D32V5, multiclass
        clus
vv       DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE
  CLUS_1                            2                             64
  CLUS_2                           12                             98
  CLUS_3                            0                             10
  CLUS_4                           11                             67
D32V6, multiclass
        clus
vv       DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE
  CLUS_1                            6                             45
  CLUS_2                            1                             24
  CLUS_3                           16                            124
  CLUS_4                            2                             46
D32V7, multiclass
        clus
vv       DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE
  CLUS_1                            3                             28
  CLUS_2                            8                             51
  CLUS_3                            3                             44
  CLUS_4                            3                             51
D32V8, multiclass
        clus
vv       DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE
  CLUS_1                            2                             47
  CLUS_2                           11                             51
  CLUS_3                            4                             76
D32V9, multiclass
        clus
vv       DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE
  CLUS_1                           17                            157
  CLUS_2                           19                            144
  CLUS_3                            2                             59
D32V10, multiclass
        clus
vv       DEL PEAK  8(3Q26.31) MUTATED DEL PEAK  8(3Q26.31) WILD-TYPE
  CLUS_1                           17                            155
  CLUS_2                            3                             41
  CLUS_3                           18                            164

Clustering(33) Variable = Del Peak  9(4p16.2) mutation analysis
D33V1, multiclass
        clus
vv       DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE
  CLUS_1                           7                            24
  CLUS_2                          28                            34
  CLUS_3                           3                            27
  CLUS_4                          10                            13
D33V2, multiclass
        clus
vv       DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE
  CLUS_1                          21                            35
  CLUS_2                           7                            37
  CLUS_3                          20                            26
D33V3, multiclass
        clus
vv       DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE
  CLUS_1                          73                            97
  CLUS_2                          23                           164
  CLUS_3                          19                            13
  CLUS_4                           6                            18
D33V4, multiclass
        clus
vv       DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE
  CLUS_1                          37                            68
  CLUS_2                          14                            72
  CLUS_3                          18                            45
D33V5, multiclass
        clus
vv       DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE
  CLUS_1                          22                            44
  CLUS_2                          30                            80
  CLUS_3                           4                             6
  CLUS_4                          15                            63
D33V6, multiclass
        clus
vv       DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE
  CLUS_1                           8                            43
  CLUS_2                           6                            19
  CLUS_3                          38                           102
  CLUS_4                          19                            29
D33V7, multiclass
        clus
vv       DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE
  CLUS_1                           9                            22
  CLUS_2                          24                            35
  CLUS_3                          16                            31
  CLUS_4                           4                            50
D33V8, multiclass
        clus
vv       DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE
  CLUS_1                           3                            46
  CLUS_2                          23                            39
  CLUS_3                          27                            53
D33V9, multiclass
        clus
vv       DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE
  CLUS_1                          57                           117
  CLUS_2                          44                           119
  CLUS_3                          15                            46
D33V10, multiclass
        clus
vv       DEL PEAK  9(4P16.2) MUTATED DEL PEAK  9(4P16.2) WILD-TYPE
  CLUS_1                          58                           114
  CLUS_2                          10                            34
  CLUS_3                          48                           134

Clustering(34) Variable = Del Peak 10(4q22.1) mutation analysis
D34V1, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                           9                            22
  CLUS_2                          26                            36
  CLUS_3                           2                            28
  CLUS_4                          12                            11
D34V2, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          22                            34
  CLUS_2                           7                            37
  CLUS_3                          20                            26
D34V3, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          77                            93
  CLUS_2                          28                           159
  CLUS_3                          18                            14
  CLUS_4                           3                            21
D34V4, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          41                            64
  CLUS_2                          14                            72
  CLUS_3                          20                            43
D34V5, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          23                            43
  CLUS_2                          35                            75
  CLUS_3                           4                             6
  CLUS_4                          18                            60
D34V6, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          10                            41
  CLUS_2                           6                            19
  CLUS_3                          45                            95
  CLUS_4                          19                            29
D34V7, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                           9                            22
  CLUS_2                          28                            31
  CLUS_3                          15                            32
  CLUS_4                           5                            49
D34V8, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                           3                            46
  CLUS_2                          25                            37
  CLUS_3                          29                            51
D34V9, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          58                           116
  CLUS_2                          51                           112
  CLUS_3                          13                            48
D34V10, multiclass
        clus
vv       DEL PEAK 10(4Q22.1) MUTATED DEL PEAK 10(4Q22.1) WILD-TYPE
  CLUS_1                          58                           114
  CLUS_2                          13                            31
  CLUS_3                          51                           131

Clustering(35) Variable = Del Peak 11(4q35.1) mutation analysis
D35V1, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                           7                            24
  CLUS_2                          30                            32
  CLUS_3                           3                            27
  CLUS_4                          13                            10
D35V2, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          25                            31
  CLUS_2                           8                            36
  CLUS_3                          20                            26
D35V3, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          88                            82
  CLUS_2                          28                           159
  CLUS_3                          16                            16
  CLUS_4                           5                            19
D35V4, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          46                            59
  CLUS_2                          13                            73
  CLUS_3                          20                            43
D35V5, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          25                            41
  CLUS_2                          34                            76
  CLUS_3                           5                             5
  CLUS_4                          20                            58
D35V6, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          11                            40
  CLUS_2                           9                            16
  CLUS_3                          44                            96
  CLUS_4                          20                            28
D35V7, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          11                            20
  CLUS_2                          30                            29
  CLUS_3                          15                            32
  CLUS_4                           7                            47
D35V8, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                           6                            43
  CLUS_2                          28                            34
  CLUS_3                          29                            51
D35V9, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          62                           112
  CLUS_2                          54                           109
  CLUS_3                          16                            45
D35V10, multiclass
        clus
vv       DEL PEAK 11(4Q35.1) MUTATED DEL PEAK 11(4Q35.1) WILD-TYPE
  CLUS_1                          65                           107
  CLUS_2                          13                            31
  CLUS_3                          54                           128

Clustering(36) Variable = Del Peak 12(5q11.2) mutation analysis
D36V1, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                           8                            23
  CLUS_2                          19                            43
  CLUS_3                           0                            30
  CLUS_4                           7                            16
D36V2, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                           8                            48
  CLUS_2                           7                            37
  CLUS_3                          19                            27
D36V3, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          60                           110
  CLUS_2                          16                           171
  CLUS_3                           9                            23
  CLUS_4                           6                            18
D36V4, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          26                            79
  CLUS_2                          11                            75
  CLUS_3                          18                            45
D36V5, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          18                            48
  CLUS_2                          22                            88
  CLUS_3                           3                             7
  CLUS_4                          15                            63
D36V6, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                           9                            42
  CLUS_2                           3                            22
  CLUS_3                          27                           113
  CLUS_4                          19                            29
D36V7, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                           9                            22
  CLUS_2                          19                            40
  CLUS_3                           8                            39
  CLUS_4                           3                            51
D36V8, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                           3                            46
  CLUS_2                          14                            48
  CLUS_3                          22                            58
D36V9, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          41                           133
  CLUS_2                          34                           129
  CLUS_3                          13                            48
D36V10, multiclass
        clus
vv       DEL PEAK 12(5Q11.2) MUTATED DEL PEAK 12(5Q11.2) WILD-TYPE
  CLUS_1                          41                           131
  CLUS_2                          13                            31
  CLUS_3                          34                           148

Clustering(37) Variable = Del Peak 13(5q21.3) mutation analysis
D37V1, multiclass
        clus
vv       DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE
  CLUS_1                           8                            23
  CLUS_2                          23                            39
  CLUS_3                           4                            26
  CLUS_4                           6                            17
D37V2, multiclass
        clus
vv       DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE
  CLUS_1                          15                            41
  CLUS_2                           7                            37
  CLUS_3                          19                            27
D37V3, multiclass
        clus
vv       DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE
  CLUS_1                          71                            99
  CLUS_2                          24                           163
  CLUS_3                          14                            18
  CLUS_4                           8                            16
D37V4, multiclass
        clus
vv       DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE
  CLUS_1                          35                            70
  CLUS_2                          16                            70
  CLUS_3                          22                            41
D37V5, multiclass
        clus
vv       DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE
  CLUS_1                          24                            42
  CLUS_2                          27                            83
  CLUS_3                           4                             6
  CLUS_4                          18                            60
D37V6, multiclass
        clus
vv       DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE
  CLUS_1                          11                            40
  CLUS_2                           5                            20
  CLUS_3                          36                           104
  CLUS_4                          21                            27
D37V7, multiclass
        clus
vv       DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE
  CLUS_1                          10                            21
  CLUS_2                          23                            36
  CLUS_3                          10                            37
  CLUS_4                           6                            48
D37V8, multiclass
        clus
vv       DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE
  CLUS_1                           5                            44
  CLUS_2                          20                            42
  CLUS_3                          24                            56
D37V9, multiclass
        clus
vv       DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE
  CLUS_1                          48                           126
  CLUS_2                          50                           113
  CLUS_3                          15                            46
D37V10, multiclass
        clus
vv       DEL PEAK 13(5Q21.3) MUTATED DEL PEAK 13(5Q21.3) WILD-TYPE
  CLUS_1                          50                           122
  CLUS_2                          16                            28
  CLUS_3                          47                           135

Clustering(38) Variable = Del Peak 14(5q23.1) mutation analysis
D38V1, multiclass
        clus
vv       DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE
  CLUS_1                           8                            23
  CLUS_2                          19                            43
  CLUS_3                           2                            28
  CLUS_4                           6                            17
D38V2, multiclass
        clus
vv       DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE
  CLUS_1                          12                            44
  CLUS_2                           6                            38
  CLUS_3                          17                            29
D38V3, multiclass
        clus
vv       DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE
  CLUS_1                          64                           106
  CLUS_2                          22                           165
  CLUS_3                          13                            19
  CLUS_4                           8                            16
D38V4, multiclass
        clus
vv       DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE
  CLUS_1                          33                            72
  CLUS_2                          16                            70
  CLUS_3                          20                            43
D38V5, multiclass
        clus
vv       DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE
  CLUS_1                          22                            44
  CLUS_2                          25                            85
  CLUS_3                           4                             6
  CLUS_4                          16                            62
D38V6, multiclass
        clus
vv       DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE
  CLUS_1                           9                            42
  CLUS_2                           6                            19
  CLUS_3                          33                           107
  CLUS_4                          19                            29
D38V7, multiclass
        clus
vv       DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE
  CLUS_1                           9                            22
  CLUS_2                          22                            37
  CLUS_3                          10                            37
  CLUS_4                           7                            47
D38V8, multiclass
        clus
vv       DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE
  CLUS_1                           5                            44
  CLUS_2                          20                            42
  CLUS_3                          23                            57
D38V9, multiclass
        clus
vv       DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE
  CLUS_1                          41                           133
  CLUS_2                          46                           117
  CLUS_3                          16                            45
D38V10, multiclass
        clus
vv       DEL PEAK 14(5Q23.1) MUTATED DEL PEAK 14(5Q23.1) WILD-TYPE
  CLUS_1                          43                           129
  CLUS_2                          16                            28
  CLUS_3                          44                           138

Clustering(39) Variable = Del Peak 15(6p25.3) mutation analysis
D39V1, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           4                            27
  CLUS_2                           8                            54
  CLUS_3                           5                            25
  CLUS_4                           3                            20
D39V2, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           8                            48
  CLUS_2                           7                            37
  CLUS_3                           5                            41
D39V3, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          13                           157
  CLUS_2                          23                           164
  CLUS_3                           9                            23
  CLUS_4                           9                            15
D39V4, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          19                            86
  CLUS_2                           6                            80
  CLUS_3                           6                            57
D39V5, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           7                            59
  CLUS_2                          11                            99
  CLUS_3                           2                             8
  CLUS_4                           9                            69
D39V6, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           7                            44
  CLUS_2                           4                            21
  CLUS_3                          12                           128
  CLUS_4                           6                            42
D39V7, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           1                            30
  CLUS_2                           9                            50
  CLUS_3                           6                            41
  CLUS_4                           8                            46
D39V8, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                           5                            44
  CLUS_2                           9                            53
  CLUS_3                          10                            70
D39V9, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          21                           153
  CLUS_2                          19                           144
  CLUS_3                          11                            50
D39V10, multiclass
        clus
vv       DEL PEAK 15(6P25.3) MUTATED DEL PEAK 15(6P25.3) WILD-TYPE
  CLUS_1                          22                           150
  CLUS_2                           3                            41
  CLUS_3                          26                           156

Clustering(40) Variable = Del Peak 16(6q26) mutation analysis
D40V1, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         2                          29
  CLUS_2                        12                          50
  CLUS_3                         6                          24
  CLUS_4                         4                          19
D40V2, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        11                          45
  CLUS_2                         4                          40
  CLUS_3                         9                          37
D40V3, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        25                         145
  CLUS_2                        23                         164
  CLUS_3                         9                          23
  CLUS_4                         3                          21
D40V4, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        18                          87
  CLUS_2                        10                          76
  CLUS_3                         6                          57
D40V5, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         9                          57
  CLUS_2                        15                          95
  CLUS_3                         4                           6
  CLUS_4                         9                          69
D40V6, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         6                          45
  CLUS_2                         5                          20
  CLUS_3                        18                         122
  CLUS_4                         8                          40
D40V7, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         3                          28
  CLUS_2                         8                          51
  CLUS_3                         8                          39
  CLUS_4                         8                          46
D40V8, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                         5                          44
  CLUS_2                        10                          52
  CLUS_3                        12                          68
D40V9, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        27                         147
  CLUS_2                        22                         141
  CLUS_3                        10                          51
D40V10, multiclass
        clus
vv       DEL PEAK 16(6Q26) MUTATED DEL PEAK 16(6Q26) WILD-TYPE
  CLUS_1                        28                         144
  CLUS_2                         4                          40
  CLUS_3                        27                         155

Clustering(41) Variable = Del Peak 17(7q31.1) mutation analysis
D41V1, multiclass
        clus
vv       DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE
  CLUS_1                           1                            30
  CLUS_2                           2                            60
  CLUS_3                           0                            30
  CLUS_4                           0                            23
D41V2, multiclass
        clus
vv       DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE
  CLUS_1                           1                            55
  CLUS_2                           0                            44
  CLUS_3                           2                            44
D41V3, multiclass
        clus
vv       DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE
  CLUS_1                           6                           164
  CLUS_2                           4                           183
  CLUS_3                           1                            31
  CLUS_4                           0                            24
D41V4, multiclass
        clus
vv       DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE
  CLUS_1                           4                           101
  CLUS_2                           2                            84
  CLUS_3                           1                            62
D41V5, multiclass
        clus
vv       DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE
  CLUS_1                           1                            65
  CLUS_2                           1                           109
  CLUS_3                           0                            10
  CLUS_4                           4                            74
D41V6, multiclass
        clus
vv       DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE
  CLUS_1                           2                            49
  CLUS_2                           1                            24
  CLUS_3                           3                           137
  CLUS_4                           0                            48
D41V7, multiclass
        clus
vv       DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE
  CLUS_1                           1                            30
  CLUS_2                           3                            56
  CLUS_3                           0                            47
  CLUS_4                           1                            53
D41V8, multiclass
        clus
vv       DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE
  CLUS_1                           1                            48
  CLUS_2                           2                            60
  CLUS_3                           2                            78
D41V9, multiclass
        clus
vv       DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE
  CLUS_1                           5                           169
  CLUS_2                           5                           158
  CLUS_3                           1                            60
D41V10, multiclass
        clus
vv       DEL PEAK 17(7Q31.1) MUTATED DEL PEAK 17(7Q31.1) WILD-TYPE
  CLUS_1                           5                           167
  CLUS_2                           2                            42
  CLUS_3                           4                           178

Clustering(42) Variable = Del Peak 18(8p23.3) mutation analysis
D42V1, multiclass
        clus
vv       DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE
  CLUS_1                          11                            20
  CLUS_2                          33                            29
  CLUS_3                           5                            25
  CLUS_4                          13                            10
D42V2, multiclass
        clus
vv       DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE
  CLUS_1                          20                            36
  CLUS_2                          12                            32
  CLUS_3                          30                            16
D42V3, multiclass
        clus
vv       DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE
  CLUS_1                         119                            51
  CLUS_2                          32                           155
  CLUS_3                           6                            26
  CLUS_4                          14                            10
D42V4, multiclass
        clus
vv       DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE
  CLUS_1                          62                            43
  CLUS_2                          21                            65
  CLUS_3                          22                            41
D42V5, multiclass
        clus
vv       DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE
  CLUS_1                          30                            36
  CLUS_2                          44                            66
  CLUS_3                           6                             4
  CLUS_4                          25                            53
D42V6, multiclass
        clus
vv       DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE
  CLUS_1                          11                            40
  CLUS_2                           5                            20
  CLUS_3                          61                            79
  CLUS_4                          28                            20
D42V7, multiclass
        clus
vv       DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE
  CLUS_1                          16                            15
  CLUS_2                          33                            26
  CLUS_3                          18                            29
  CLUS_4                          11                            43
D42V8, multiclass
        clus
vv       DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE
  CLUS_1                          10                            39
  CLUS_2                          31                            31
  CLUS_3                          37                            43
D42V9, multiclass
        clus
vv       DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE
  CLUS_1                          74                           100
  CLUS_2                          74                            89
  CLUS_3                          19                            42
D42V10, multiclass
        clus
vv       DEL PEAK 18(8P23.3) MUTATED DEL PEAK 18(8P23.3) WILD-TYPE
  CLUS_1                          75                            97
  CLUS_2                          18                            26
  CLUS_3                          74                           108

Clustering(43) Variable = Del Peak 19(8p22) mutation analysis
D43V1, multiclass
        clus
vv       DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE
  CLUS_1                         8                          23
  CLUS_2                        36                          26
  CLUS_3                         7                          23
  CLUS_4                        13                          10
D43V2, multiclass
        clus
vv       DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE
  CLUS_1                        26                          30
  CLUS_2                        10                          34
  CLUS_3                        28                          18
D43V3, multiclass
        clus
vv       DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE
  CLUS_1                       129                          41
  CLUS_2                        33                         154
  CLUS_3                         8                          24
  CLUS_4                        15                           9
D43V4, multiclass
        clus
vv       DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE
  CLUS_1                        69                          36
  CLUS_2                        24                          62
  CLUS_3                        24                          39
D43V5, multiclass
        clus
vv       DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE
  CLUS_1                        34                          32
  CLUS_2                        51                          59
  CLUS_3                         6                           4
  CLUS_4                        27                          51
D43V6, multiclass
        clus
vv       DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE
  CLUS_1                        12                          39
  CLUS_2                         5                          20
  CLUS_3                        70                          70
  CLUS_4                        31                          17
D43V7, multiclass
        clus
vv       DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE
  CLUS_1                        17                          14
  CLUS_2                        38                          21
  CLUS_3                        21                          26
  CLUS_4                        11                          43
D43V8, multiclass
        clus
vv       DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE
  CLUS_1                        11                          38
  CLUS_2                        34                          28
  CLUS_3                        42                          38
D43V9, multiclass
        clus
vv       DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE
  CLUS_1                        76                          98
  CLUS_2                        83                          80
  CLUS_3                        22                          39
D43V10, multiclass
        clus
vv       DEL PEAK 19(8P22) MUTATED DEL PEAK 19(8P22) WILD-TYPE
  CLUS_1                        77                          95
  CLUS_2                        22                          22
  CLUS_3                        82                         100

Clustering(44) Variable = Del Peak 20(8p11.22) mutation analysis
D44V1, multiclass
        clus
vv       DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE
  CLUS_1                            6                             25
  CLUS_2                           14                             48
  CLUS_3                            2                             28
  CLUS_4                            6                             17
D44V2, multiclass
        clus
vv       DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE
  CLUS_1                           13                             43
  CLUS_2                            4                             40
  CLUS_3                           11                             35
D44V3, multiclass
        clus
vv       DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE
  CLUS_1                           58                            112
  CLUS_2                           18                            169
  CLUS_3                            3                             29
  CLUS_4                            1                             23
D44V4, multiclass
        clus
vv       DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE
  CLUS_1                           25                             80
  CLUS_2                           10                             76
  CLUS_3                           15                             48
D44V5, multiclass
        clus
vv       DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE
  CLUS_1                           18                             48
  CLUS_2                           22                             88
  CLUS_3                            4                              6
  CLUS_4                            8                             70
D44V6, multiclass
        clus
vv       DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE
  CLUS_1                            4                             47
  CLUS_2                            3                             22
  CLUS_3                           32                            108
  CLUS_4                           13                             35
D44V7, multiclass
        clus
vv       DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE
  CLUS_1                            6                             25
  CLUS_2                           16                             43
  CLUS_3                           10                             37
  CLUS_4                            5                             49
D44V8, multiclass
        clus
vv       DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE
  CLUS_1                            5                             44
  CLUS_2                           11                             51
  CLUS_3                           21                             59
D44V9, multiclass
        clus
vv       DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE
  CLUS_1                           36                            138
  CLUS_2                           35                            128
  CLUS_3                            8                             53
D44V10, multiclass
        clus
vv       DEL PEAK 20(8P11.22) MUTATED DEL PEAK 20(8P11.22) WILD-TYPE
  CLUS_1                           35                            137
  CLUS_2                            7                             37
  CLUS_3                           37                            145

Clustering(45) Variable = Del Peak 21(8p11.21) mutation analysis
D45V1, multiclass
        clus
vv       DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE
  CLUS_1                            4                             27
  CLUS_2                           13                             49
  CLUS_3                            0                             30
  CLUS_4                            2                             21
D45V2, multiclass
        clus
vv       DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE
  CLUS_1                            9                             47
  CLUS_2                            3                             41
  CLUS_3                            7                             39
D45V3, multiclass
        clus
vv       DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE
  CLUS_1                           35                            135
  CLUS_2                            7                            180
  CLUS_3                            1                             31
  CLUS_4                            0                             24
D45V4, multiclass
        clus
vv       DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE
  CLUS_1                           12                             93
  CLUS_2                            5                             81
  CLUS_3                            7                             56
D45V5, multiclass
        clus
vv       DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE
  CLUS_1                            9                             57
  CLUS_2                           12                             98
  CLUS_3                            1                              9
  CLUS_4                            4                             74
D45V6, multiclass
        clus
vv       DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE
  CLUS_1                            1                             50
  CLUS_2                            1                             24
  CLUS_3                           17                            123
  CLUS_4                            7                             41
D45V7, multiclass
        clus
vv       DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE
  CLUS_1                            2                             29
  CLUS_2                            8                             51
  CLUS_3                            5                             42
  CLUS_4                            3                             51
D45V8, multiclass
        clus
vv       DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE
  CLUS_1                            2                             47
  CLUS_2                            6                             56
  CLUS_3                           10                             70
D45V9, multiclass
        clus
vv       DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE
  CLUS_1                           22                            152
  CLUS_2                           18                            145
  CLUS_3                            2                             59
D45V10, multiclass
        clus
vv       DEL PEAK 21(8P11.21) MUTATED DEL PEAK 21(8P11.21) WILD-TYPE
  CLUS_1                           21                            151
  CLUS_2                            5                             39
  CLUS_3                           16                            166

Clustering(46) Variable = Del Peak 22(9p21.3) mutation analysis
D46V1, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                           4                            27
  CLUS_2                          11                            51
  CLUS_3                           1                            29
  CLUS_4                           4                            19
D46V2, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                           9                            47
  CLUS_2                           3                            41
  CLUS_3                           8                            38
D46V3, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          35                           135
  CLUS_2                          10                           177
  CLUS_3                           7                            25
  CLUS_4                           4                            20
D46V4, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          17                            88
  CLUS_2                           7                            79
  CLUS_3                          10                            53
D46V5, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                           9                            57
  CLUS_2                          17                            93
  CLUS_3                           1                             9
  CLUS_4                           8                            70
D46V6, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                           4                            47
  CLUS_2                           1                            24
  CLUS_3                          20                           120
  CLUS_4                          10                            38
D46V7, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                           7                            24
  CLUS_2                          12                            47
  CLUS_3                           6                            41
  CLUS_4                           3                            51
D46V8, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                           3                            46
  CLUS_2                          10                            52
  CLUS_3                          15                            65
D46V9, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          24                           150
  CLUS_2                          23                           140
  CLUS_3                           7                            54
D46V10, multiclass
        clus
vv       DEL PEAK 22(9P21.3) MUTATED DEL PEAK 22(9P21.3) WILD-TYPE
  CLUS_1                          23                           149
  CLUS_2                           4                            40
  CLUS_3                          27                           155

Clustering(47) Variable = Del Peak 23(10p15.3) mutation analysis
D47V1, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                            3                             28
  CLUS_2                           12                             50
  CLUS_3                            2                             28
  CLUS_4                            5                             18
D47V2, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                            9                             47
  CLUS_2                            3                             41
  CLUS_3                           10                             36
D47V3, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           38                            132
  CLUS_2                           12                            175
  CLUS_3                           15                             17
  CLUS_4                            3                             21
D47V4, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           26                             79
  CLUS_2                            9                             77
  CLUS_3                            9                             54
D47V5, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           14                             52
  CLUS_2                           22                             88
  CLUS_3                            3                              7
  CLUS_4                           10                             68
D47V6, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                            4                             47
  CLUS_2                            4                             21
  CLUS_3                           27                            113
  CLUS_4                           14                             34
D47V7, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                            4                             27
  CLUS_2                           14                             45
  CLUS_3                           11                             36
  CLUS_4                            5                             49
D47V8, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                            3                             46
  CLUS_2                           13                             49
  CLUS_3                           18                             62
D47V9, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           26                            148
  CLUS_2                           30                            133
  CLUS_3                            9                             52
D47V10, multiclass
        clus
vv       DEL PEAK 23(10P15.3) MUTATED DEL PEAK 23(10P15.3) WILD-TYPE
  CLUS_1                           27                            145
  CLUS_2                            5                             39
  CLUS_3                           33                            149

Clustering(48) Variable = Del Peak 24(10q21.1) mutation analysis
D48V1, multiclass
        clus
vv       DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE
  CLUS_1                            3                             28
  CLUS_2                           18                             44
  CLUS_3                            1                             29
  CLUS_4                            5                             18
D48V2, multiclass
        clus
vv       DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE
  CLUS_1                           12                             44
  CLUS_2                            3                             41
  CLUS_3                           12                             34
D48V3, multiclass
        clus
vv       DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE
  CLUS_1                           48                            122
  CLUS_2                           12                            175
  CLUS_3                           17                             15
  CLUS_4                            5                             19
D48V4, multiclass
        clus
vv       DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE
  CLUS_1                           27                             78
  CLUS_2                           13                             73
  CLUS_3                           12                             51
D48V5, multiclass
        clus
vv       DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE
  CLUS_1                           15                             51
  CLUS_2                           25                             85
  CLUS_3                            3                              7
  CLUS_4                           13                             65
D48V6, multiclass
        clus
vv       DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE
  CLUS_1                            3                             48
  CLUS_2                            5                             20
  CLUS_3                           32                            108
  CLUS_4                           16                             32
D48V7, multiclass
        clus
vv       DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE
  CLUS_1                            6                             25
  CLUS_2                           16                             43
  CLUS_3                           10                             37
  CLUS_4                            6                             48
D48V8, multiclass
        clus
vv       DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE
  CLUS_1                            4                             45
  CLUS_2                           16                             46
  CLUS_3                           18                             62
D48V9, multiclass
        clus
vv       DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE
  CLUS_1                           34                            140
  CLUS_2                           34                            129
  CLUS_3                           11                             50
D48V10, multiclass
        clus
vv       DEL PEAK 24(10Q21.1) MUTATED DEL PEAK 24(10Q21.1) WILD-TYPE
  CLUS_1                           35                            137
  CLUS_2                            7                             37
  CLUS_3                           37                            145

Clustering(49) Variable = Del Peak 25(10q23.31) mutation analysis
D49V1, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                             4                              27
  CLUS_2                            17                              45
  CLUS_3                             4                              26
  CLUS_4                             6                              17
D49V2, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            12                              44
  CLUS_2                             5                              39
  CLUS_3                            14                              32
D49V3, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            53                             117
  CLUS_2                            21                             166
  CLUS_3                            15                              17
  CLUS_4                             5                              19
D49V4, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            32                              73
  CLUS_2                            15                              71
  CLUS_3                            12                              51
D49V5, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            17                              49
  CLUS_2                            28                              82
  CLUS_3                             3                               7
  CLUS_4                            14                              64
D49V6, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                             7                              44
  CLUS_2                             6                              19
  CLUS_3                            34                             106
  CLUS_4                            15                              33
D49V7, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                             7                              24
  CLUS_2                            20                              39
  CLUS_3                            12                              35
  CLUS_4                             6                              48
D49V8, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                             7                              42
  CLUS_2                            18                              44
  CLUS_3                            20                              60
D49V9, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            38                             136
  CLUS_2                            38                             125
  CLUS_3                            15                              46
D49V10, multiclass
        clus
vv       DEL PEAK 25(10Q23.31) MUTATED DEL PEAK 25(10Q23.31) WILD-TYPE
  CLUS_1                            40                             132
  CLUS_2                            10                              34
  CLUS_3                            41                             141

Clustering(50) Variable = Del Peak 26(10q25.2) mutation analysis
D50V1, multiclass
        clus
vv       DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE
  CLUS_1                            4                             27
  CLUS_2                           15                             47
  CLUS_3                            4                             26
  CLUS_4                            8                             15
D50V2, multiclass
        clus
vv       DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE
  CLUS_1                           14                             42
  CLUS_2                            3                             41
  CLUS_3                           14                             32
D50V3, multiclass
        clus
vv       DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE
  CLUS_1                           57                            113
  CLUS_2                           16                            171
  CLUS_3                           17                             15
  CLUS_4                            3                             21
D50V4, multiclass
        clus
vv       DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE
  CLUS_1                           33                             72
  CLUS_2                           12                             74
  CLUS_3                           12                             51
D50V5, multiclass
        clus
vv       DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE
  CLUS_1                           17                             49
  CLUS_2                           27                             83
  CLUS_3                            5                              5
  CLUS_4                           14                             64
D50V6, multiclass
        clus
vv       DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE
  CLUS_1                            7                             44
  CLUS_2                            6                             19
  CLUS_3                           35                            105
  CLUS_4                           15                             33
D50V7, multiclass
        clus
vv       DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE
  CLUS_1                            7                             24
  CLUS_2                           21                             38
  CLUS_3                           11                             36
  CLUS_4                            4                             50
D50V8, multiclass
        clus
vv       DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE
  CLUS_1                            3                             46
  CLUS_2                           19                             43
  CLUS_3                           21                             59
D50V9, multiclass
        clus
vv       DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE
  CLUS_1                           39                            135
  CLUS_2                           36                            127
  CLUS_3                           15                             46
D50V10, multiclass
        clus
vv       DEL PEAK 26(10Q25.2) MUTATED DEL PEAK 26(10Q25.2) WILD-TYPE
  CLUS_1                           42                            130
  CLUS_2                           11                             33
  CLUS_3                           37                            145

Clustering(51) Variable = Del Peak 27(12p13.2) mutation analysis
D51V1, multiclass
        clus
vv       DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE
  CLUS_1                            2                             29
  CLUS_2                           11                             51
  CLUS_3                            0                             30
  CLUS_4                            2                             21
D51V2, multiclass
        clus
vv       DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE
  CLUS_1                            7                             49
  CLUS_2                            0                             44
  CLUS_3                            8                             38
D51V3, multiclass
        clus
vv       DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE
  CLUS_1                           34                            136
  CLUS_2                            4                            183
  CLUS_3                            5                             27
  CLUS_4                            1                             23
D51V4, multiclass
        clus
vv       DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE
  CLUS_1                           16                             89
  CLUS_2                            8                             78
  CLUS_3                            4                             59
D51V5, multiclass
        clus
vv       DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE
  CLUS_1                            5                             61
  CLUS_2                           13                             97
  CLUS_3                            2                              8
  CLUS_4                           11                             67
D51V6, multiclass
        clus
vv       DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE
  CLUS_1                            4                             47
  CLUS_2                            3                             22
  CLUS_3                           18                            122
  CLUS_4                            6                             42
D51V7, multiclass
        clus
vv       DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE
  CLUS_1                            3                             28
  CLUS_2                           13                             46
  CLUS_3                            5                             42
  CLUS_4                            2                             52
D51V8, multiclass
        clus
vv       DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE
  CLUS_1                            1                             48
  CLUS_2                           14                             48
  CLUS_3                            8                             72
D51V9, multiclass
        clus
vv       DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE
  CLUS_1                           17                            157
  CLUS_2                           19                            144
  CLUS_3                            8                             53
D51V10, multiclass
        clus
vv       DEL PEAK 27(12P13.2) MUTATED DEL PEAK 27(12P13.2) WILD-TYPE
  CLUS_1                           19                            153
  CLUS_2                            4                             40
  CLUS_3                           21                            161

Clustering(52) Variable = Del Peak 28(13q14.13) mutation analysis
D52V1, multiclass
        clus
vv       DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE
  CLUS_1                             0                              31
  CLUS_2                             4                              58
  CLUS_3                             2                              28
  CLUS_4                             0                              23
D52V2, multiclass
        clus
vv       DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE
  CLUS_1                             3                              53
  CLUS_2                             1                              43
  CLUS_3                             2                              44
D52V3, multiclass
        clus
vv       DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE
  CLUS_1                             1                             169
  CLUS_2                             9                             178
  CLUS_3                             6                              26
  CLUS_4                             2                              22
D52V4, multiclass
        clus
vv       DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE
  CLUS_1                             3                             102
  CLUS_2                             3                              83
  CLUS_3                             6                              57
D52V5, multiclass
        clus
vv       DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE
  CLUS_1                             5                              61
  CLUS_2                             4                             106
  CLUS_3                             0                              10
  CLUS_4                             3                              75
D52V6, multiclass
        clus
vv       DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE
  CLUS_1                             0                              51
  CLUS_2                             0                              25
  CLUS_3                             8                             132
  CLUS_4                             4                              44
D52V7, multiclass
        clus
vv       DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE
  CLUS_1                             0                              31
  CLUS_2                             4                              55
  CLUS_3                             5                              42
  CLUS_4                             2                              52
D52V8, multiclass
        clus
vv       DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE
  CLUS_1                             1                              48
  CLUS_2                             4                              58
  CLUS_3                             6                              74
D52V9, multiclass
        clus
vv       DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE
  CLUS_1                             8                             166
  CLUS_2                             6                             157
  CLUS_3                             4                              57
D52V10, multiclass
        clus
vv       DEL PEAK 28(13Q14.13) MUTATED DEL PEAK 28(13Q14.13) WILD-TYPE
  CLUS_1                             9                             163
  CLUS_2                             1                              43
  CLUS_3                             8                             174

Clustering(53) Variable = Del Peak 29(14q32.11) mutation analysis
D53V1, multiclass
        clus
vv       DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE
  CLUS_1                             7                              24
  CLUS_2                            35                              27
  CLUS_3                             3                              27
  CLUS_4                            11                              12
D53V2, multiclass
        clus
vv       DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE
  CLUS_1                            22                              34
  CLUS_2                             7                              37
  CLUS_3                            27                              19
D53V3, multiclass
        clus
vv       DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE
  CLUS_1                            98                              72
  CLUS_2                            22                             165
  CLUS_3                            10                              22
  CLUS_4                             3                              21
D53V4, multiclass
        clus
vv       DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE
  CLUS_1                            43                              62
  CLUS_2                            14                              72
  CLUS_3                            16                              47
D53V5, multiclass
        clus
vv       DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE
  CLUS_1                            20                              46
  CLUS_2                            49                              61
  CLUS_3                             3                               7
  CLUS_4                            13                              65
D53V6, multiclass
        clus
vv       DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE
  CLUS_1                             6                              45
  CLUS_2                             6                              19
  CLUS_3                            53                              87
  CLUS_4                            20                              28
D53V7, multiclass
        clus
vv       DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE
  CLUS_1                            11                              20
  CLUS_2                            28                              31
  CLUS_3                            13                              34
  CLUS_4                             5                              49
D53V8, multiclass
        clus
vv       DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE
  CLUS_1                             5                              44
  CLUS_2                            25                              37
  CLUS_3                            27                              53
D53V9, multiclass
        clus
vv       DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE
  CLUS_1                            61                             113
  CLUS_2                            46                             117
  CLUS_3                            22                              39
D53V10, multiclass
        clus
vv       DEL PEAK 29(14Q32.11) MUTATED DEL PEAK 29(14Q32.11) WILD-TYPE
  CLUS_1                            63                             109
  CLUS_2                             8                              36
  CLUS_3                            58                             124

Clustering(54) Variable = Del Peak 30(15q11.2) mutation analysis
D54V1, multiclass
        clus
vv       DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE
  CLUS_1                            8                             23
  CLUS_2                           35                             27
  CLUS_3                            5                             25
  CLUS_4                           12                             11
D54V2, multiclass
        clus
vv       DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE
  CLUS_1                           25                             31
  CLUS_2                           10                             34
  CLUS_3                           25                             21
D54V3, multiclass
        clus
vv       DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE
  CLUS_1                          104                             66
  CLUS_2                           29                            158
  CLUS_3                           22                             10
  CLUS_4                            5                             19
D54V4, multiclass
        clus
vv       DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE
  CLUS_1                           51                             54
  CLUS_2                           22                             64
  CLUS_3                           22                             41
D54V5, multiclass
        clus
vv       DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE
  CLUS_1                           30                             36
  CLUS_2                           39                             71
  CLUS_3                            7                              3
  CLUS_4                           23                             55
D54V6, multiclass
        clus
vv       DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE
  CLUS_1                           14                             37
  CLUS_2                            6                             19
  CLUS_3                           55                             85
  CLUS_4                           24                             24
D54V7, multiclass
        clus
vv       DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE
  CLUS_1                           13                             18
  CLUS_2                           32                             27
  CLUS_3                           19                             28
  CLUS_4                            5                             49
D54V8, multiclass
        clus
vv       DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE
  CLUS_1                            6                             43
  CLUS_2                           29                             33
  CLUS_3                           34                             46
D54V9, multiclass
        clus
vv       DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE
  CLUS_1                           67                            107
  CLUS_2                           65                             98
  CLUS_3                           22                             39
D54V10, multiclass
        clus
vv       DEL PEAK 30(15Q11.2) MUTATED DEL PEAK 30(15Q11.2) WILD-TYPE
  CLUS_1                           69                            103
  CLUS_2                           16                             28
  CLUS_3                           69                            113

Clustering(55) Variable = Del Peak 31(15q21.1) mutation analysis
D55V1, multiclass
        clus
vv       DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE
  CLUS_1                           11                             20
  CLUS_2                           30                             32
  CLUS_3                            5                             25
  CLUS_4                           12                             11
D55V2, multiclass
        clus
vv       DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE
  CLUS_1                           24                             32
  CLUS_2                           11                             33
  CLUS_3                           23                             23
D55V3, multiclass
        clus
vv       DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE
  CLUS_1                           97                             73
  CLUS_2                           30                            157
  CLUS_3                           20                             12
  CLUS_4                            4                             20
D55V4, multiclass
        clus
vv       DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE
  CLUS_1                           47                             58
  CLUS_2                           20                             66
  CLUS_3                           21                             42
D55V5, multiclass
        clus
vv       DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE
  CLUS_1                           29                             37
  CLUS_2                           38                             72
  CLUS_3                            6                              4
  CLUS_4                           21                             57
D55V6, multiclass
        clus
vv       DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE
  CLUS_1                           13                             38
  CLUS_2                            5                             20
  CLUS_3                           53                             87
  CLUS_4                           23                             25
D55V7, multiclass
        clus
vv       DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE
  CLUS_1                           12                             19
  CLUS_2                           31                             28
  CLUS_3                           17                             30
  CLUS_4                            3                             51
D55V8, multiclass
        clus
vv       DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE
  CLUS_1                            4                             45
  CLUS_2                           28                             34
  CLUS_3                           31                             49
D55V9, multiclass
        clus
vv       DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE
  CLUS_1                           64                            110
  CLUS_2                           58                            105
  CLUS_3                           22                             39
D55V10, multiclass
        clus
vv       DEL PEAK 31(15Q21.1) MUTATED DEL PEAK 31(15Q21.1) WILD-TYPE
  CLUS_1                           67                            105
  CLUS_2                           15                             29
  CLUS_3                           62                            120

Clustering(56) Variable = Del Peak 32(15q22.33) mutation analysis
D56V1, multiclass
        clus
vv       DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE
  CLUS_1                             8                              23
  CLUS_2                            30                              32
  CLUS_3                             3                              27
  CLUS_4                            11                              12
D56V2, multiclass
        clus
vv       DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE
  CLUS_1                            24                              32
  CLUS_2                             7                              37
  CLUS_3                            21                              25
D56V3, multiclass
        clus
vv       DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE
  CLUS_1                            96                              74
  CLUS_2                            23                             164
  CLUS_3                            21                              11
  CLUS_4                             5                              19
D56V4, multiclass
        clus
vv       DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE
  CLUS_1                            49                              56
  CLUS_2                            17                              69
  CLUS_3                            22                              41
D56V5, multiclass
        clus
vv       DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE
  CLUS_1                            28                              38
  CLUS_2                            35                              75
  CLUS_3                             5                               5
  CLUS_4                            21                              57
D56V6, multiclass
        clus
vv       DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE
  CLUS_1                            12                              39
  CLUS_2                             5                              20
  CLUS_3                            49                              91
  CLUS_4                            23                              25
D56V7, multiclass
        clus
vv       DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE
  CLUS_1                            13                              18
  CLUS_2                            33                              26
  CLUS_3                            17                              30
  CLUS_4                             3                              51
D56V8, multiclass
        clus
vv       DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE
  CLUS_1                             4                              45
  CLUS_2                            29                              33
  CLUS_3                            33                              47
D56V9, multiclass
        clus
vv       DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE
  CLUS_1                            59                             115
  CLUS_2                            57                             106
  CLUS_3                            22                              39
D56V10, multiclass
        clus
vv       DEL PEAK 32(15Q22.33) MUTATED DEL PEAK 32(15Q22.33) WILD-TYPE
  CLUS_1                            61                             111
  CLUS_2                            11                              33
  CLUS_3                            66                             116

Clustering(57) Variable = Del Peak 33(16p13.3) mutation analysis
D57V1, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                            3                             28
  CLUS_2                           10                             52
  CLUS_3                            1                             29
  CLUS_4                            3                             20
D57V2, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                            5                             51
  CLUS_2                            3                             41
  CLUS_3                            9                             37
D57V3, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           21                            149
  CLUS_2                           15                            172
  CLUS_3                            6                             26
  CLUS_4                            3                             21
D57V4, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           14                             91
  CLUS_2                            6                             80
  CLUS_3                            7                             56
D57V5, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                            9                             57
  CLUS_2                           10                            100
  CLUS_3                            3                              7
  CLUS_4                            7                             71
D57V6, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                            6                             45
  CLUS_2                            3                             22
  CLUS_3                           14                            126
  CLUS_4                            6                             42
D57V7, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                            2                             29
  CLUS_2                            8                             51
  CLUS_3                            6                             41
  CLUS_4                            4                             50
D57V8, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                            3                             46
  CLUS_2                            7                             55
  CLUS_3                           10                             70
D57V9, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           20                            154
  CLUS_2                           18                            145
  CLUS_3                            5                             56
D57V10, multiclass
        clus
vv       DEL PEAK 33(16P13.3) MUTATED DEL PEAK 33(16P13.3) WILD-TYPE
  CLUS_1                           20                            152
  CLUS_2                            3                             41
  CLUS_3                           20                            162

Clustering(58) Variable = Del Peak 34(16q23.1) mutation analysis
D58V1, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                            8                             23
  CLUS_2                            7                             55
  CLUS_3                            5                             25
  CLUS_4                            2                             21
D58V2, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                            4                             52
  CLUS_2                           13                             31
  CLUS_3                            5                             41
D58V3, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           13                            157
  CLUS_2                           28                            159
  CLUS_3                            5                             27
  CLUS_4                            3                             21
D58V4, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                            8                             97
  CLUS_2                           12                             74
  CLUS_3                            6                             57
D58V5, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                            9                             57
  CLUS_2                           11                             99
  CLUS_3                            2                              8
  CLUS_4                            9                             69
D58V6, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                            4                             47
  CLUS_2                            4                             21
  CLUS_3                           17                            123
  CLUS_4                            6                             42
D58V7, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                            1                             30
  CLUS_2                            5                             54
  CLUS_3                            4                             43
  CLUS_4                           12                             42
D58V8, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           10                             39
  CLUS_2                            4                             58
  CLUS_3                            8                             72
D58V9, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           21                            153
  CLUS_2                           18                            145
  CLUS_3                            7                             54
D58V10, multiclass
        clus
vv       DEL PEAK 34(16Q23.1) MUTATED DEL PEAK 34(16Q23.1) WILD-TYPE
  CLUS_1                           23                            149
  CLUS_2                            3                             41
  CLUS_3                           20                            162

Clustering(59) Variable = Del Peak 35(17p12) mutation analysis
D59V1, multiclass
        clus
vv       DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE
  CLUS_1                         10                           21
  CLUS_2                         49                           13
  CLUS_3                          7                           23
  CLUS_4                         16                            7
D59V2, multiclass
        clus
vv       DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE
  CLUS_1                         36                           20
  CLUS_2                         11                           33
  CLUS_3                         35                           11
D59V3, multiclass
        clus
vv       DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE
  CLUS_1                        146                           24
  CLUS_2                         43                          144
  CLUS_3                         24                            8
  CLUS_4                         16                            8
D59V4, multiclass
        clus
vv       DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE
  CLUS_1                         82                           23
  CLUS_2                         30                           56
  CLUS_3                         29                           34
D59V5, multiclass
        clus
vv       DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE
  CLUS_1                         38                           28
  CLUS_2                         66                           44
  CLUS_3                          8                            2
  CLUS_4                         33                           45
D59V6, multiclass
        clus
vv       DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE
  CLUS_1                         16                           35
  CLUS_2                          7                           18
  CLUS_3                         86                           54
  CLUS_4                         36                           12
D59V7, multiclass
        clus
vv       DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE
  CLUS_1                         20                           11
  CLUS_2                         49                           10
  CLUS_3                         23                           24
  CLUS_4                         11                           43
D59V8, multiclass
        clus
vv       DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE
  CLUS_1                         11                           38
  CLUS_2                         48                           14
  CLUS_3                         44                           36
D59V9, multiclass
        clus
vv       DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE
  CLUS_1                         96                           78
  CLUS_2                         97                           66
  CLUS_3                         30                           31
D59V10, multiclass
        clus
vv       DEL PEAK 35(17P12) MUTATED DEL PEAK 35(17P12) WILD-TYPE
  CLUS_1                         99                           73
  CLUS_2                         26                           18
  CLUS_3                         98                           84

Clustering(60) Variable = Del Peak 36(17q24.3) mutation analysis
D60V1, multiclass
        clus
vv       DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE
  CLUS_1                            4                             27
  CLUS_2                           14                             48
  CLUS_3                            1                             29
  CLUS_4                            3                             20
D60V2, multiclass
        clus
vv       DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE
  CLUS_1                           10                             46
  CLUS_2                            5                             39
  CLUS_3                            7                             39
D60V3, multiclass
        clus
vv       DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE
  CLUS_1                           28                            142
  CLUS_2                           16                            171
  CLUS_3                            9                             23
  CLUS_4                            6                             18
D60V4, multiclass
        clus
vv       DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE
  CLUS_1                           16                             89
  CLUS_2                            5                             81
  CLUS_3                           14                             49
D60V5, multiclass
        clus
vv       DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE
  CLUS_1                           10                             56
  CLUS_2                           11                             99
  CLUS_3                            0                             10
  CLUS_4                            7                             71
D60V6, multiclass
        clus
vv       DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE
  CLUS_1                            2                             49
  CLUS_2                            2                             23
  CLUS_3                           15                            125
  CLUS_4                            9                             39
D60V7, multiclass
        clus
vv       DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE
  CLUS_1                            4                             27
  CLUS_2                           14                             45
  CLUS_3                            8                             39
  CLUS_4                            1                             53
D60V8, multiclass
        clus
vv       DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE
  CLUS_1                            2                             47
  CLUS_2                           13                             49
  CLUS_3                           12                             68
D60V9, multiclass
        clus
vv       DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE
  CLUS_1                           24                            150
  CLUS_2                           23                            140
  CLUS_3                           11                             50
D60V10, multiclass
        clus
vv       DEL PEAK 36(17Q24.3) MUTATED DEL PEAK 36(17Q24.3) WILD-TYPE
  CLUS_1                           26                            146
  CLUS_2                            6                             38
  CLUS_3                           26                            156

Clustering(61) Variable = Del Peak 37(18p11.31) mutation analysis
D61V1, multiclass
        clus
vv       DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE
  CLUS_1                             6                              25
  CLUS_2                            51                              11
  CLUS_3                             5                              25
  CLUS_4                            16                               7
D61V2, multiclass
        clus
vv       DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE
  CLUS_1                            36                              20
  CLUS_2                             7                              37
  CLUS_3                            35                              11
D61V3, multiclass
        clus
vv       DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE
  CLUS_1                           145                              25
  CLUS_2                            34                             153
  CLUS_3                            28                               4
  CLUS_4                            13                              11
D61V4, multiclass
        clus
vv       DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE
  CLUS_1                            83                              22
  CLUS_2                            22                              64
  CLUS_3                            31                              32
D61V5, multiclass
        clus
vv       DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE
  CLUS_1                            33                              33
  CLUS_2                            68                              42
  CLUS_3                             6                               4
  CLUS_4                            32                              46
D61V6, multiclass
        clus
vv       DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE
  CLUS_1                            16                              35
  CLUS_2                             7                              18
  CLUS_3                            87                              53
  CLUS_4                            29                              19
D61V7, multiclass
        clus
vv       DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE
  CLUS_1                            17                              14
  CLUS_2                            52                               7
  CLUS_3                            24                              23
  CLUS_4                             5                              49
D61V8, multiclass
        clus
vv       DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE
  CLUS_1                             7                              42
  CLUS_2                            45                              17
  CLUS_3                            46                              34
D61V9, multiclass
        clus
vv       DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE
  CLUS_1                            91                              83
  CLUS_2                            92                              71
  CLUS_3                            29                              32
D61V10, multiclass
        clus
vv       DEL PEAK 37(18P11.31) MUTATED DEL PEAK 37(18P11.31) WILD-TYPE
  CLUS_1                            94                              78
  CLUS_2                            22                              22
  CLUS_3                            96                              86

Clustering(62) Variable = Del Peak 38(18q12.2) mutation analysis
D62V1, multiclass
        clus
vv       DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE
  CLUS_1                            8                             23
  CLUS_2                           53                              9
  CLUS_3                            8                             22
  CLUS_4                           17                              6
D62V2, multiclass
        clus
vv       DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE
  CLUS_1                           39                             17
  CLUS_2                            9                             35
  CLUS_3                           38                              8
D62V3, multiclass
        clus
vv       DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE
  CLUS_1                          157                             13
  CLUS_2                           44                            143
  CLUS_3                           27                              5
  CLUS_4                           19                              5
D62V4, multiclass
        clus
vv       DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE
  CLUS_1                           93                             12
  CLUS_2                           29                             57
  CLUS_3                           31                             32
D62V5, multiclass
        clus
vv       DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE
  CLUS_1                           39                             27
  CLUS_2                           70                             40
  CLUS_3                            7                              3
  CLUS_4                           36                             42
D62V6, multiclass
        clus
vv       DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE
  CLUS_1                           19                             32
  CLUS_2                            8                             17
  CLUS_3                           91                             49
  CLUS_4                           34                             14
D62V7, multiclass
        clus
vv       DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE
  CLUS_1                           21                             10
  CLUS_2                           53                              6
  CLUS_3                           28                             19
  CLUS_4                            8                             46
D62V8, multiclass
        clus
vv       DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE
  CLUS_1                           11                             38
  CLUS_2                           48                             14
  CLUS_3                           51                             29
D62V9, multiclass
        clus
vv       DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE
  CLUS_1                          103                             71
  CLUS_2                          103                             60
  CLUS_3                           33                             28
D62V10, multiclass
        clus
vv       DEL PEAK 38(18Q12.2) MUTATED DEL PEAK 38(18Q12.2) WILD-TYPE
  CLUS_1                          105                             67
  CLUS_2                           25                             19
  CLUS_3                          109                             73

Clustering(63) Variable = Del Peak 39(18q21.2) mutation analysis
D63V1, multiclass
        clus
vv       DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE
  CLUS_1                            8                             23
  CLUS_2                           53                              9
  CLUS_3                            9                             21
  CLUS_4                           17                              6
D63V2, multiclass
        clus
vv       DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE
  CLUS_1                           40                             16
  CLUS_2                            9                             35
  CLUS_3                           38                              8
D63V3, multiclass
        clus
vv       DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE
  CLUS_1                          161                              9
  CLUS_2                           51                            136
  CLUS_3                           28                              4
  CLUS_4                           20                              4
D63V4, multiclass
        clus
vv       DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE
  CLUS_1                           94                             11
  CLUS_2                           38                             48
  CLUS_3                           33                             30
D63V5, multiclass
        clus
vv       DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE
  CLUS_1                           41                             25
  CLUS_2                           76                             34
  CLUS_3                            8                              2
  CLUS_4                           38                             40
D63V6, multiclass
        clus
vv       DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE
  CLUS_1                           21                             30
  CLUS_2                            9                             16
  CLUS_3                           97                             43
  CLUS_4                           36                             12
D63V7, multiclass
        clus
vv       DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE
  CLUS_1                           21                             10
  CLUS_2                           54                              5
  CLUS_3                           29                             18
  CLUS_4                           13                             41
D63V8, multiclass
        clus
vv       DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE
  CLUS_1                           15                             34
  CLUS_2                           49                             13
  CLUS_3                           53                             27
D63V9, multiclass
        clus
vv       DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE
  CLUS_1                          105                             69
  CLUS_2                          114                             49
  CLUS_3                           33                             28
D63V10, multiclass
        clus
vv       DEL PEAK 39(18Q21.2) MUTATED DEL PEAK 39(18Q21.2) WILD-TYPE
  CLUS_1                          107                             65
  CLUS_2                           29                             15
  CLUS_3                          116                             66

Clustering(64) Variable = Del Peak 40(18q22.1) mutation analysis
D64V1, multiclass
        clus
vv       DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE
  CLUS_1                            8                             23
  CLUS_2                           54                              8
  CLUS_3                            9                             21
  CLUS_4                           17                              6
D64V2, multiclass
        clus
vv       DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE
  CLUS_1                           40                             16
  CLUS_2                           10                             34
  CLUS_3                           38                              8
D64V3, multiclass
        clus
vv       DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE
  CLUS_1                          162                              8
  CLUS_2                           50                            137
  CLUS_3                           29                              3
  CLUS_4                           19                              5
D64V4, multiclass
        clus
vv       DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE
  CLUS_1                           94                             11
  CLUS_2                           38                             48
  CLUS_3                           32                             31
D64V5, multiclass
        clus
vv       DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE
  CLUS_1                           41                             25
  CLUS_2                           76                             34
  CLUS_3                            8                              2
  CLUS_4                           39                             39
D64V6, multiclass
        clus
vv       DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE
  CLUS_1                           21                             30
  CLUS_2                            9                             16
  CLUS_3                           98                             42
  CLUS_4                           36                             12
D64V7, multiclass
        clus
vv       DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE
  CLUS_1                           21                             10
  CLUS_2                           54                              5
  CLUS_3                           29                             18
  CLUS_4                           14                             40
D64V8, multiclass
        clus
vv       DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE
  CLUS_1                           15                             34
  CLUS_2                           50                             12
  CLUS_3                           53                             27
D64V9, multiclass
        clus
vv       DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE
  CLUS_1                          106                             68
  CLUS_2                          113                             50
  CLUS_3                           33                             28
D64V10, multiclass
        clus
vv       DEL PEAK 40(18Q22.1) MUTATED DEL PEAK 40(18Q22.1) WILD-TYPE
  CLUS_1                          108                             64
  CLUS_2                           27                             17
  CLUS_3                          117                             65

Clustering(65) Variable = Del Peak 41(19p13.3) mutation analysis
D65V1, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                            4                             27
  CLUS_2                           16                             46
  CLUS_3                            3                             27
  CLUS_4                            4                             19
D65V2, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           10                             46
  CLUS_2                            5                             39
  CLUS_3                           12                             34
D65V3, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           34                            136
  CLUS_2                           14                            173
  CLUS_3                            6                             26
  CLUS_4                            3                             21
D65V4, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           13                             92
  CLUS_2                            7                             79
  CLUS_3                            8                             55
D65V5, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                            9                             57
  CLUS_2                            7                            103
  CLUS_3                            2                              8
  CLUS_4                           13                             65
D65V6, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                            7                             44
  CLUS_2                            1                             24
  CLUS_3                           13                            127
  CLUS_4                           10                             38
D65V7, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                            4                             27
  CLUS_2                           12                             47
  CLUS_3                            5                             42
  CLUS_4                            2                             52
D65V8, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                            2                             47
  CLUS_2                           13                             49
  CLUS_3                            8                             72
D65V9, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           27                            147
  CLUS_2                           22                            141
  CLUS_3                            6                             55
D65V10, multiclass
        clus
vv       DEL PEAK 41(19P13.3) MUTATED DEL PEAK 41(19P13.3) WILD-TYPE
  CLUS_1                           27                            145
  CLUS_2                           11                             33
  CLUS_3                           17                            165

Clustering(66) Variable = Del Peak 42(20p12.1) mutation analysis
D66V1, multiclass
        clus
vv       DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE
  CLUS_1                            3                             28
  CLUS_2                           17                             45
  CLUS_3                            3                             27
  CLUS_4                            2                             21
D66V2, multiclass
        clus
vv       DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE
  CLUS_1                           10                             46
  CLUS_2                            4                             40
  CLUS_3                           11                             35
D66V3, multiclass
        clus
vv       DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE
  CLUS_1                           61                            109
  CLUS_2                           12                            175
  CLUS_3                            0                             32
  CLUS_4                            6                             18
D66V4, multiclass
        clus
vv       DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE
  CLUS_1                           31                             74
  CLUS_2                            9                             77
  CLUS_3                           11                             52
D66V5, multiclass
        clus
vv       DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE
  CLUS_1                            9                             57
  CLUS_2                           24                             86
  CLUS_3                            2                              8
  CLUS_4                           12                             66
D66V6, multiclass
        clus
vv       DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE
  CLUS_1                            6                             45
  CLUS_2                            2                             23
  CLUS_3                           32                            108
  CLUS_4                            7                             41
D66V7, multiclass
        clus
vv       DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE
  CLUS_1                            8                             23
  CLUS_2                           24                             35
  CLUS_3                            7                             40
  CLUS_4                            4                             50
D66V8, multiclass
        clus
vv       DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE
  CLUS_1                            4                             45
  CLUS_2                           20                             42
  CLUS_3                           19                             61
D66V9, multiclass
        clus
vv       DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE
  CLUS_1                           26                            148
  CLUS_2                           39                            124
  CLUS_3                           10                             51
D66V10, multiclass
        clus
vv       DEL PEAK 42(20P12.1) MUTATED DEL PEAK 42(20P12.1) WILD-TYPE
  CLUS_1                           25                            147
  CLUS_2                           12                             32
  CLUS_3                           38                            144

Clustering(67) Variable = Del Peak 43(21q11.2) mutation analysis
D67V1, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                            7                             24
  CLUS_2                           30                             32
  CLUS_3                            4                             26
  CLUS_4                            6                             17
D67V2, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           23                             33
  CLUS_2                            9                             35
  CLUS_3                           15                             31
D67V3, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           72                             98
  CLUS_2                           30                            157
  CLUS_3                           18                             14
  CLUS_4                            5                             19
D67V4, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           39                             66
  CLUS_2                           17                             69
  CLUS_3                           19                             44
D67V5, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           20                             46
  CLUS_2                           37                             73
  CLUS_3                            2                              8
  CLUS_4                           22                             56
D67V6, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           12                             39
  CLUS_2                            5                             20
  CLUS_3                           47                             93
  CLUS_4                           17                             31
D67V7, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           10                             21
  CLUS_2                           28                             31
  CLUS_3                           16                             31
  CLUS_4                            7                             47
D67V8, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                            8                             41
  CLUS_2                           24                             38
  CLUS_3                           29                             51
D67V9, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           51                            123
  CLUS_2                           51                            112
  CLUS_3                           18                             43
D67V10, multiclass
        clus
vv       DEL PEAK 43(21Q11.2) MUTATED DEL PEAK 43(21Q11.2) WILD-TYPE
  CLUS_1                           51                            121
  CLUS_2                           10                             34
  CLUS_3                           59                            123

Clustering(68) Variable = Del Peak 44(22q13.32) mutation analysis
D68V1, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                             8                              23
  CLUS_2                            34                              28
  CLUS_3                             4                              26
  CLUS_4                            10                              13
D68V2, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            26                              30
  CLUS_2                             7                              37
  CLUS_3                            23                              23
D68V3, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            85                              85
  CLUS_2                            28                             159
  CLUS_3                            17                              15
  CLUS_4                             8                              16
D68V4, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            38                              67
  CLUS_2                            15                              71
  CLUS_3                            24                              39
D68V5, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            24                              42
  CLUS_2                            38                              72
  CLUS_3                             5                               5
  CLUS_4                            21                              57
D68V6, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                             9                              42
  CLUS_2                             8                              17
  CLUS_3                            53                              87
  CLUS_4                            18                              30
D68V7, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            10                              21
  CLUS_2                            28                              31
  CLUS_3                            17                              30
  CLUS_4                             8                              46
D68V8, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                             7                              42
  CLUS_2                            29                              33
  CLUS_3                            27                              53
D68V9, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            59                             115
  CLUS_2                            49                             114
  CLUS_3                            24                              37
D68V10, multiclass
        clus
vv       DEL PEAK 44(22Q13.32) MUTATED DEL PEAK 44(22Q13.32) WILD-TYPE
  CLUS_1                            62                             110
  CLUS_2                             8                              36
  CLUS_3                            62                             120
                     V1                      V2                      V3 
            "MRNA_CNMF"    "MRNA_CHIERARCHICAL"               "CN_CNMF" 
                     V4                      V5                      V6 
     "METHLYATION_CNMF"             "RPPA_CNMF"    "RPPA_CHIERARCHICAL" 
                     V7                      V8                      V9 
         "MRNASEQ_CNMF" "MRNASEQ_CHIERARCHICAL"           "MIRSEQ_CNMF" 
                    V10 
 "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
