GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2904203/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COADREAD-TP/2904202/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2861379/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2907070/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 mergedfile | COADREAD-TP |
GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2900515/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2859804/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2900512/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2859807/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2860151/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2860148/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
Execution Times: | |
Submitted: | 09:03:56 09-04-13 |
Completed: | |
Elapsed: | 00 hrs 55 mins 44 secs |
step 1. GDAC_mergedClustering [id: 375074] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2904203/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COADREAD-TP/2904202/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
mirnacnmf | |
mirnahc | |
copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2861379/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
methlyationhc | |
methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2907070/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
mergedfile | COADREAD-TP |
PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2900515/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2859804/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
PredictionUNCTCGA | |
mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2900512/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2859807/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2860151/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2860148/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
Output Files: | |
COADREAD-TP.mergedcluster.txt | |
COADREAD-TP.transferedmergedcluster.txt | |
.lsf.out | |
stdout.txt |
Execution Times: | |
Submitted: | 09:04:00 09-04-13 |
Completed: | 09:04:28 09-04-13 |
Elapsed: | 00 hrs 00 mins 28 secs |
step 2. GDAC_mergedReport [id: 375075]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
mergedcluster | COADREAD-TP.mergedcluster.txt |
Output Files: | |
report.html | |
.lsf.out | |
stdout.txt |
Execution Times: | |
Submitted: | 09:04:00 09-04-13 |
Completed: | 09:59:39 09-04-13 |
Elapsed: | 00 hrs 55 mins 39 secs |