Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	broad_values_by_arm.mutsig.cluster.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	table.1.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D71V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D72V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D53V12.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D14V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D40V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D32V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D71V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D37V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D37V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D14V9.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D72V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D6V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D25V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D13V9.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D77V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D69V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D72V9.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D13V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D44V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D36V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D65V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D45V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	broad_values_by_arm.mutsig.cluster.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	table.1.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D71V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D72V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D53V12.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D14V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D40V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D32V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D71V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D37V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D37V3.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D14V9.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D72V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D6V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D25V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D13V9.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D77V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D69V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D72V9.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D13V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D44V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D36V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D65V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	D45V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
Correlate_Clinical_Cnvsarms_onlysig:clinical.info.file	COADREAD-TP.clin.merged.picked.txt	gdac.broadinstitute.org_COADREAD-TP.Clinical_Pick_Tier1.Level_4.2013032600.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00500:42	Correlate_Clinical_vs_CopyNumber_Arm_2013032600	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_COADREAD-TP.Correlate_Clinical_vs_CopyNumber_Arm.Level_4.2013032600.0.0	yes
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