| GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2904208/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/GBM-TP/2904225/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt |
| GDAC_mergedClustering1 mirnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2900566/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| GDAC_mergedClustering1 mirnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mirnaConsensusClusteringPipeline/GBM-TP/2859825/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt |
| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2861643/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2906636/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | GBM-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2900567/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/GBM-TP/2859821/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2900568/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/GBM-TP/2859822/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 09:27:43 09-04-13 |
| Completed: | |
| Elapsed: | 00 hrs 55 mins 37 secs |
step 1. GDAC_mergedClustering [id: 375522] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2904208/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/GBM-TP/2904225/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt |
| mirnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2900566/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| mirnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mirnaConsensusClusteringPipeline/GBM-TP/2859825/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2861643/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2906636/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| mergedfile | GBM-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2900567/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/GBM-TP/2859821/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2900568/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/GBM-TP/2859822/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt |
| miRseqcnmf | |
| miRseqhc |
| Output Files: | |
| GBM-TP.transferedmergedcluster.txt | |
| GBM-TP.mergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 09:27:44 09-04-13 |
| Completed: | 09:28:21 09-04-13 |
| Elapsed: | 00 hrs 00 mins 37 secs |
step 2. GDAC_mergedReport [id: 375523]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | GBM-TP.transferedmergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 09:27:44 09-04-13 |
| Completed: | 10:23:19 09-04-13 |
| Elapsed: | 00 hrs 55 mins 34 secs |