# Created: Tue Apr 09 09:28:21 EDT 2013 by cgaadm_deadline
# Job: 375522    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: GDAC_mergedClustering urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
# Parameters: 
#    mrnacnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2904208/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt
#    mrnahc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/GBM-TP/2904225/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt
#    mirnacnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2900566/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt
#    mirnahc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mirnaConsensusClusteringPipeline/GBM-TP/2859825/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt
#    copynumber = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2861643/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt
#    methlyationhc = 
#    methlyationcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2906636/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt
#    mergedfile = GBM-TP
#    PredictionU133aTCGA = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2900567/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt
#    PredictionU133aPhilips = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/GBM-TP/2859821/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt
#    PredictionUNCTCGA = 
#    mRNAseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/GBM-TP/2900568/3.GDAC_CNMFselectcluster.Finished/GBM-TP.bestclus.txt
#    mRNAseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/GBM-TP/2859822/3.GDAC_selectBestcluster.Finished/GBM-TP.bestclus.txt
#    miRseqcnmf = 
#    miRseqhc = 
