Correlate_Clinical_Clusters_onlysig1 cluster label file | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/GBM-TP/2909397/1.GDAC_mergedClustering.Finished/GBM-TP.mergedcluster.txt |
Correlate_Clinical_Clusters_onlysig1 clinical info file | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/GBM-TP/2843145/1.GDAC_clinicalDataPicker.Finished/GBM-TP.clin.merged.picked.txt |
Correlate_Clinical_Clusters_onlysig1 filter cluster smaller than | 3 |
Correlate_Clinical_Clusters_onlysig1 figure height | 5 |
Correlate_Clinical_Clusters_onlysig1 figure width | 9 |
Correlate_Clinical_Clusters_onlysig1 survival legend position | OUT |
Correlate_Clinical_Clusters_onlysig1 pvalue cutoff | 0.05 |
Correlate_Clinical_Clusters_onlysig1 qvalue cutoff | 0.25 |
Correlate_Clinical_Clusters_onlysig1 make figure | ALL |
Correlate_Clinical_Clusters_onlysig1 nozzle ver | Nozzle.R1 |
Correlate_Clinical_Clusters_onlysig1 options | AGGREGRATED_CLUSTER |
Execution Times: | |
Submitted: | 10:27:24 09-04-13 |
Completed: | |
Elapsed: | 00 hrs 03 mins 16 secs |
step 1. Correlate_Clinical_Clusters_onlysig [id: 376732]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00335:84
cluster label file | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/GBM-TP/2909397/1.GDAC_mergedClustering.Finished/GBM-TP.mergedcluster.txt |
clinical info file | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/GBM-TP/2843145/1.GDAC_clinicalDataPicker.Finished/GBM-TP.clin.merged.picked.txt |
features used | ALL |
filter cluster smaller than | 3 |
output name | |
figure height | 5 |
figure width | 9 |
survival legend position | OUT |
pvalue cutoff | 0.05 |
qvalue cutoff | 0.25 |
make figure | ALL |
nozzle ver | Nozzle.R1 |
options | AGGREGRATED_CLUSTER |
report title | |
job description |
Execution Times: | |
Submitted: | 10:27:40 09-04-13 |
Completed: | 10:30:40 09-04-13 |
Elapsed: | 00 hrs 02 mins 59 secs |