
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.84.4098/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.84.4098/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/LAML-TB/2907506/1.GDAC_mergedClustering.Finished/LAML-TB.mergedcluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/LAML-TB/2843136/1.GDAC_clinicalDataPicker.Finished/LAML-TB.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ALL", "-oT=", "-nV=Nozzle.R1", "-OP=AGGREGRATED_CLUSTER", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"  "-oT="
[1] "opt"                     "-OP=AGGREGRATED_CLUSTER"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"                 "AGGREGRATED_CLUSTER"
[1] "dx" ""  

nPatients in clinical file=200, in cluster file=200, common to both=200
[1]   6 200
[1] "CN_CNMF"
[1] 3
  1   2   3   4   5 
142  15  15  18   1 
  1   2   3   4 
142  15  15  18 
[1] "METHLYATION_CNMF"
[1] 3
 1  2  3  4  5  6 
48 18 26 40 48 14 
 1  2  3  4  5  6 
48 18 26 40 48 14 
[1] "MRNASEQ_CNMF"
[1] 3
 1  2  3 
74 54 45 
 1  2  3 
74 54 45 
[1] "MRNASEQ_CHIERARCHICAL"
[1] 3
  1   2 
 59 114 
  1   2 
 59 114 
[1] "MIRSEQ_CNMF"
[1] 3
 1  2  3 
86 40 61 
 1  2  3 
86 40 61 
[1] "MIRSEQ_CHIERARCHICAL"
[1] 3
 1  2  3 
38 82 67 
 1  2  3 
38 82 67 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                     "DAYSTODEATH"                     
 [3] "DAYSTOLASTFOLLOWUP"               "VITALSTATUS"                     
 [5] "DCCUPLOADDATE"                    "PRIMARYSITEOFDESEASE"            
 [7] "GENDER"                           "DATEOFINITIALPATHOLOGICDIAGNOSIS"
 [9] "DAYSTOLASTKNOWNALIVE"             "KARNOFSKYPERFORMANCESCORE"       
[11] "BATCHNUMBER"                     

Input Data has 11 rows and 200 columns.

[1] "Batch" "11"   
[1] "Last Follow UP"
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
          NA           NA         2556           NA           NA           NA 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
        2861           NA           NA           NA           NA           NA 
TCGA-AB-2814 TCGA-AB-2815 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 
          NA           NA           NA           NA           NA         2496 
TCGA-AB-2820 TCGA-AB-2821 TCGA-AB-2822 TCGA-AB-2823 TCGA-AB-2824 TCGA-AB-2825 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 
          NA           NA         2284           NA           NA           NA 
TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2837 
          NA           NA           NA         1673           NA           NA 
TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2842 TCGA-AB-2843 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 
          NA           NA           NA           NA           NA         2220 
TCGA-AB-2850 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2856 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2857 TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2861 TCGA-AB-2862 
          NA           NA           NA           NA           NA         1430 
TCGA-AB-2863 TCGA-AB-2864 TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 
         243           NA          153          638          273          396 
TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 
         212         1219          638           NA          245          424 
TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 
         393           NA          730           NA           NA          181 
TCGA-AB-2887 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2890 TCGA-AB-2891 TCGA-AB-2892 
          NA          334          304           NA           NA          942 
TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 
          NA           NA           NA           NA          243          393 
TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2901 TCGA-AB-2903 TCGA-AB-2904 TCGA-AB-2905 
          NA           NA           58           NA           NA         1610 
TCGA-AB-2906 TCGA-AB-2907 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2910 TCGA-AB-2911 
         577           NA           NA           30           NA         1186 
TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 TCGA-AB-2915 TCGA-AB-2916 TCGA-AB-2917 
          NA         1216          792           NA          882         1216 
TCGA-AB-2918 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2921 TCGA-AB-2922 TCGA-AB-2923 
          NA           61           NA           NA           NA           NA 
TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 
          90           NA           NA           NA           59           NA 
TCGA-AB-2930 TCGA-AB-2931 TCGA-AB-2932 TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 
          NA           NA           NA           NA           28           NA 
TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2940 TCGA-AB-2941 
          59           NA           NA          455           NA           NA 
TCGA-AB-2942 TCGA-AB-2943 TCGA-AB-2944 TCGA-AB-2945 TCGA-AB-2946 TCGA-AB-2947 
         641           NA           NA           NA           NA           31 
TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 
          NA          699          306           NA         1492           NA 
TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 
          NA          608           NA           NA         1277           NA 
TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 
          NA         1035           NA         1127           NA           NA 
TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 TCGA-AB-2975 TCGA-AB-2976 TCGA-AB-2977 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 
         699          671          699          487          149           NA 
TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 
        1156           NA           NA           NA           NA           NA 
TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 
         457         1826           NA           NA         1798         1551 
TCGA-AB-2996 TCGA-AB-2997 TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 
        1581           NA           NA         1734         1249         1581 
TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 
          NA         2099           NA         1581           NA           NA 
TCGA-AB-3011 TCGA-AB-3012 
        1885         1887 
Variable 1:'AGE':	nDistinctValues=63,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=67,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=59,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=10,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'KARNOFSKY.PERFORMANCE.SCORE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'BATCH.NUMBER':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"    "GENDER"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 200 columns, 1 survival variables, and 2 non-survival variables.
AGE, nv=63, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE

Clustering(1) Variable = CN_CNMF
D1V1, survival
          sevent
clus2       0  1
  subtype1 53 73
  subtype2  3  8
  subtype3  3  9
  subtype4  3 15
subtype1 subtype2 subtype3 subtype4 
     126       11       12       18 
subtype1 subtype2 subtype3 subtype4 
      73        8        9       15 
$subtype1
TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2806 TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 
       26.04        84.03        31.04        94.06         2.04         1.02 
TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2814 TCGA-AB-2815 TCGA-AB-2816 TCGA-AB-2817 
        7.99        12.03        26.04        26.99         8.05         8.98 
TCGA-AB-2818 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 
        9.96        82.06        26.99         0.99         6.94        24.03 
TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2831 TCGA-AB-2832 TCGA-AB-2834 TCGA-AB-2835 
        8.98        75.09        21.04        12.00         8.05        55.00 
TCGA-AB-2836 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2844 TCGA-AB-2845 
       17.00        15.98         0.92        46.06         3.98         9.96 
TCGA-AB-2846 TCGA-AB-2848 TCGA-AB-2850 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 
       46.09        14.96         1.97         7.96         2.89        12.03 
TCGA-AB-2856 TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2864 
        4.90        18.94         9.96        47.01         1.02        18.97 
TCGA-AB-2867 TCGA-AB-2869 TCGA-AB-2870 TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 
        6.05         7.99         5.00         5.03        20.98         8.98 
TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2877 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 
       13.02         6.97        20.98         8.05        13.94        12.92 
TCGA-AB-2882 TCGA-AB-2884 TCGA-AB-2886 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2892 
       12.00        24.03         5.95        10.98         9.99        30.97 
TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2900 
        6.97         5.92         5.03         7.00         7.99         6.02 
TCGA-AB-2905 TCGA-AB-2906 TCGA-AB-2909 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 
       52.93        18.97         0.99        38.99         9.01        39.98 
TCGA-AB-2914 TCGA-AB-2919 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 TCGA-AB-2927 
       26.04         2.01         2.96         7.96        14.99         2.93 
TCGA-AB-2928 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2942 TCGA-AB-2947 TCGA-AB-2949 
        1.94         1.94         7.07        21.07         1.02        22.98 
TCGA-AB-2950 TCGA-AB-2954 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2963 TCGA-AB-2965 
       10.06        49.05         6.02        19.99        53.95        11.01 
TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2969 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 
       28.08        34.03        37.05        26.04         0.99        20.02 
TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2978 TCGA-AB-2980 TCGA-AB-2982 TCGA-AB-2984 
        3.02        30.08        22.98        22.98         4.90        38.01 
TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 
        8.98         6.97         6.05         0.99        12.00        15.02 
TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 
       60.03        56.09        25.02        59.11        50.99        51.98 
TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 
        1.02        57.01        41.06        51.98        47.05        69.01 
TCGA-AB-3006 TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       15.91        51.98        27.02        18.94        61.97        62.04 

$subtype2
TCGA-AB-2805 TCGA-AB-2830 TCGA-AB-2866 TCGA-AB-2916 TCGA-AB-2923 TCGA-AB-2934 
       18.94         9.04         5.00        29.00         1.02         0.92 
TCGA-AB-2948 TCGA-AB-2964 TCGA-AB-2970 TCGA-AB-2977 TCGA-AB-2983 
       19.07        41.98        10.03         0.99        11.01 

$subtype3
TCGA-AB-2807 TCGA-AB-2829 TCGA-AB-2860 TCGA-AB-2865 TCGA-AB-2868 TCGA-AB-2883 
        5.92         8.98        14.01         2.01         4.96        24.00 
TCGA-AB-2901 TCGA-AB-2908 TCGA-AB-2935 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2968 
        1.91         1.02         1.97         9.96        14.96        15.06 

$subtype4
TCGA-AB-2813 TCGA-AB-2822 TCGA-AB-2849 TCGA-AB-2855 TCGA-AB-2857 TCGA-AB-2878 
        1.02        31.96        72.99         6.94        10.06        12.00 
TCGA-AB-2885 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2904 TCGA-AB-2917 TCGA-AB-2920 
        7.04        12.92        22.06        16.96        39.98        12.03 
TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2945 TCGA-AB-2952 TCGA-AB-2955 TCGA-AB-2959 
        4.04         4.01         7.99         1.02        16.08        16.08 

subtype1 subtype2 subtype3 subtype4 
    0.92     0.92     1.02     1.02 
subtype1 subtype2 subtype3 subtype4 
   94.06    41.98    24.00    72.99 
subtype1 subtype2 subtype3 subtype4 
  13.480   10.030    7.450   12.015 
[1] "0.9 - 94.1 (13.5)" "0.9 - 42.0 (10.0)" "1.0 - 24.0 (7.5)" 
[4] "1.0 - 73.0 (12.0)"
  [1] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
 [13] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [19] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [25] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
 [43] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype1"
 [49] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [55] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [61] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
 [67] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
 [73] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype1"
 [85] "subtype3" "subtype4" "subtype1" "subtype1" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype4"
 [97] "subtype1" "subtype4" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype3"
[109] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype4"
[115] "subtype1" "subtype2" "subtype1" "subtype1" "subtype4" "subtype1"
[121] "subtype4" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[127] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[133] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[139] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
 [13] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [19] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [25] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
 [43] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype1"
 [49] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [55] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [61] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
 [67] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
 [73] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype1"
 [85] "subtype3" "subtype4" "subtype1" "subtype1" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype4"
 [97] "subtype1" "subtype4" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype3"
[109] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype4"
[115] "subtype1" "subtype2" "subtype1" "subtype1" "subtype4" "subtype1"
[121] "subtype4" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[127] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[133] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[139] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
 [13] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [19] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [25] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
 [43] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype1"
 [49] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [55] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [61] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
 [67] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
 [73] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype1"
 [85] "subtype3" "subtype4" "subtype1" "subtype1" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype4"
 [97] "subtype1" "subtype4" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype4" "subtype4" "subtype2" "subtype3"
[109] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype4"
[115] "subtype1" "subtype2" "subtype1" "subtype1" "subtype4" "subtype1"
[121] "subtype4" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[127] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[133] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[139] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
D1V2, continuous
D1V3, binary
          cls
clus        0  1
  subtype1 69 73
  subtype2  6  9
  subtype3  4 11
  subtype4  8 10
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   69   73
  subtype2    6    9
  subtype3    4   11
  subtype4    8   10
        clus
vv       subtype1 subtype2 subtype3 subtype4
  FEMALE       69        6        4        8
  MALE         73        9       11       10

Clustering(2) Variable = METHLYATION_CNMF
D2V1, survival
          sevent
clus2       0  1
  subtype1 12 30
  subtype2 12  4
  subtype3  7 17
  subtype4 21 15
  subtype5  9 31
  subtype6  2  9
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      42       16       24       36       40       11 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      30        4       17       15       31        9 
$subtype1
TCGA-AB-2802 TCGA-AB-2809 TCGA-AB-2811 TCGA-AB-2816 TCGA-AB-2818 TCGA-AB-2824 
       12.00         2.04         7.99         8.05         9.96         0.99 
TCGA-AB-2825 TCGA-AB-2832 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2848 TCGA-AB-2851 
        6.94        12.00        55.00        17.00        14.96         7.96 
TCGA-AB-2853 TCGA-AB-2869 TCGA-AB-2879 TCGA-AB-2883 TCGA-AB-2893 TCGA-AB-2894 
        2.89         7.99         8.05        24.00         6.97         5.92 
TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2911 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2945 
        5.03         7.00        38.99         2.96         7.96         7.99 
TCGA-AB-2947 TCGA-AB-2956 TCGA-AB-2963 TCGA-AB-2965 TCGA-AB-2967 TCGA-AB-2969 
        1.02         6.02        53.95        11.01        34.03        37.05 
TCGA-AB-2972 TCGA-AB-2974 TCGA-AB-2976 TCGA-AB-2981 TCGA-AB-2985 TCGA-AB-2986 
        0.99         3.02        30.08        16.01         8.98         6.97 
TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2993 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3011 
        6.05         0.99        25.02        69.01        15.91        61.97 

$subtype2
TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2862 TCGA-AB-2872 
       26.04        84.03         0.92        46.06        47.01        20.98 
TCGA-AB-2897 TCGA-AB-2906 TCGA-AB-2980 TCGA-AB-2982 TCGA-AB-2991 TCGA-AB-2998 
        7.99        18.97        22.98         4.90        60.03         1.02 
TCGA-AB-2999 TCGA-AB-3001 TCGA-AB-3007 TCGA-AB-3012 
       57.01        51.98        51.98        62.04 

$subtype3
TCGA-AB-2805 TCGA-AB-2810 TCGA-AB-2821 TCGA-AB-2822 TCGA-AB-2826 TCGA-AB-2863 
       18.94         1.02        26.99        31.96        24.03         1.02 
TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2874 TCGA-AB-2877 TCGA-AB-2884 TCGA-AB-2900 
        5.00         6.05        13.02        20.98        24.03         6.02 
TCGA-AB-2901 TCGA-AB-2919 TCGA-AB-2926 TCGA-AB-2936 TCGA-AB-2959 TCGA-AB-2971 
        1.91         2.01        14.99         1.94        16.08        26.04 
TCGA-AB-2973 TCGA-AB-2977 TCGA-AB-2984 TCGA-AB-2990 TCGA-AB-2992 TCGA-AB-3002 
       20.02         0.99        38.01        15.02        56.09        47.05 

$subtype4
TCGA-AB-2806 TCGA-AB-2808 TCGA-AB-2815 TCGA-AB-2819 TCGA-AB-2828 TCGA-AB-2833 
       31.04        94.06        26.99        82.06        75.09        14.99 
TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2849 TCGA-AB-2855 TCGA-AB-2858 TCGA-AB-2870 
        9.96        46.09        72.99         6.94        18.94         5.00 
TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2886 TCGA-AB-2888 
        6.97        40.08        13.94        12.92         5.95        10.98 
TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2909 TCGA-AB-2912 TCGA-AB-2914 TCGA-AB-2916 
        9.99        30.97         0.99         9.01        26.04        29.00 
TCGA-AB-2937 TCGA-AB-2939 TCGA-AB-2942 TCGA-AB-2950 TCGA-AB-2954 TCGA-AB-2955 
        7.07        14.96        21.07        10.06        49.05        16.08 
TCGA-AB-2957 TCGA-AB-2966 TCGA-AB-2979 TCGA-AB-3000 TCGA-AB-3008 TCGA-AB-3009 
       19.99        28.08        22.06        41.06        27.02        18.94 

$subtype5
TCGA-AB-2807 TCGA-AB-2813 TCGA-AB-2814 TCGA-AB-2817 TCGA-AB-2829 TCGA-AB-2830 
        5.92         1.02        26.04         8.98         8.98         9.04 
TCGA-AB-2831 TCGA-AB-2838 TCGA-AB-2843 TCGA-AB-2847 TCGA-AB-2854 TCGA-AB-2857 
       21.04        12.00         7.07        19.96        12.03        10.06 
TCGA-AB-2860 TCGA-AB-2868 TCGA-AB-2871 TCGA-AB-2873 TCGA-AB-2878 TCGA-AB-2882 
       14.01         4.96         5.03         8.98        12.00        12.00 
TCGA-AB-2885 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2904 TCGA-AB-2908 TCGA-AB-2917 
        7.04        12.92        22.06        16.96         1.02        39.98 
TCGA-AB-2920 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 TCGA-AB-2934 
       12.03         2.93         1.94         4.04         4.01         0.92 
TCGA-AB-2935 TCGA-AB-2938 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2952 TCGA-AB-2968 
        1.97         9.96        19.07        22.98         1.02        15.06 
TCGA-AB-2978 TCGA-AB-2983 TCGA-AB-2995 TCGA-AB-2996 
       22.98        11.01        50.99        51.98 

$subtype6
TCGA-AB-2812 TCGA-AB-2827 TCGA-AB-2834 TCGA-AB-2839 TCGA-AB-2844 TCGA-AB-2856 
       12.03         8.98         8.05        15.98         3.98         4.90 
TCGA-AB-2913 TCGA-AB-2923 TCGA-AB-2964 TCGA-AB-2970 TCGA-AB-2989 
       39.98         1.02        41.98        10.03        12.00 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    0.99     0.92     0.99     0.99     0.92     1.02 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
   69.01    84.03    56.09    94.06    51.98    41.98 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
   8.020   36.050   15.550   19.465   10.535   10.030 
[1] "1.0 - 69.0 (8.0)"  "0.9 - 84.0 (36.0)" "1.0 - 56.1 (15.5)"
[4] "1.0 - 94.1 (19.5)" "0.9 - 52.0 (10.5)" "1.0 - 42.0 (10.0)"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype4" "subtype5"
  [7] "subtype4" "subtype1" "subtype3" "subtype1" "subtype6" "subtype5"
 [13] "subtype5" "subtype4" "subtype1" "subtype5" "subtype1" "subtype4"
 [19] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype6"
 [25] "subtype4" "subtype5" "subtype5" "subtype5" "subtype1" "subtype4"
 [31] "subtype6" "subtype1" "subtype1" "subtype5" "subtype6" "subtype2"
 [37] "subtype2" "subtype5" "subtype6" "subtype4" "subtype4" "subtype5"
 [43] "subtype1" "subtype4" "subtype1" "subtype1" "subtype5" "subtype4"
 [49] "subtype6" "subtype5" "subtype4" "subtype5" "subtype2" "subtype3"
 [55] "subtype3" "subtype3" "subtype5" "subtype1" "subtype4" "subtype5"
 [61] "subtype2" "subtype5" "subtype3" "subtype4" "subtype4" "subtype3"
 [67] "subtype5" "subtype1" "subtype4" "subtype4" "subtype5" "subtype1"
 [73] "subtype3" "subtype5" "subtype4" "subtype4" "subtype4" "subtype4"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype5"
 [85] "subtype5" "subtype3" "subtype3" "subtype5" "subtype2" "subtype5"
 [91] "subtype4" "subtype1" "subtype4" "subtype6" "subtype4" "subtype4"
 [97] "subtype5" "subtype3" "subtype5" "subtype6" "subtype1" "subtype1"
[103] "subtype3" "subtype5" "subtype5" "subtype5" "subtype5" "subtype5"
[109] "subtype5" "subtype3" "subtype4" "subtype5" "subtype4" "subtype4"
[115] "subtype1" "subtype1" "subtype5" "subtype5" "subtype4" "subtype5"
[121] "subtype4" "subtype4" "subtype1" "subtype4" "subtype3" "subtype1"
[127] "subtype6" "subtype1" "subtype4" "subtype1" "subtype5" "subtype1"
[133] "subtype6" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[139] "subtype3" "subtype5" "subtype4" "subtype2" "subtype1" "subtype2"
[145] "subtype5" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype6" "subtype3" "subtype2" "subtype3" "subtype1" "subtype5"
[157] "subtype5" "subtype2" "subtype2" "subtype4" "subtype2" "subtype3"
[163] "subtype1" "subtype1" "subtype2" "subtype4" "subtype4" "subtype1"
[169] "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype4" "subtype5"
  [7] "subtype4" "subtype1" "subtype3" "subtype1" "subtype6" "subtype5"
 [13] "subtype5" "subtype4" "subtype1" "subtype5" "subtype1" "subtype4"
 [19] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype6"
 [25] "subtype4" "subtype5" "subtype5" "subtype5" "subtype1" "subtype4"
 [31] "subtype6" "subtype1" "subtype1" "subtype5" "subtype6" "subtype2"
 [37] "subtype2" "subtype5" "subtype6" "subtype4" "subtype4" "subtype5"
 [43] "subtype1" "subtype4" "subtype1" "subtype1" "subtype5" "subtype4"
 [49] "subtype6" "subtype5" "subtype4" "subtype5" "subtype2" "subtype3"
 [55] "subtype3" "subtype3" "subtype5" "subtype1" "subtype4" "subtype5"
 [61] "subtype2" "subtype5" "subtype3" "subtype4" "subtype4" "subtype3"
 [67] "subtype5" "subtype1" "subtype4" "subtype4" "subtype5" "subtype1"
 [73] "subtype3" "subtype5" "subtype4" "subtype4" "subtype4" "subtype4"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype5"
 [85] "subtype5" "subtype3" "subtype3" "subtype5" "subtype2" "subtype5"
 [91] "subtype4" "subtype1" "subtype4" "subtype6" "subtype4" "subtype4"
 [97] "subtype5" "subtype3" "subtype5" "subtype6" "subtype1" "subtype1"
[103] "subtype3" "subtype5" "subtype5" "subtype5" "subtype5" "subtype5"
[109] "subtype5" "subtype3" "subtype4" "subtype5" "subtype4" "subtype4"
[115] "subtype1" "subtype1" "subtype5" "subtype5" "subtype4" "subtype5"
[121] "subtype4" "subtype4" "subtype1" "subtype4" "subtype3" "subtype1"
[127] "subtype6" "subtype1" "subtype4" "subtype1" "subtype5" "subtype1"
[133] "subtype6" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[139] "subtype3" "subtype5" "subtype4" "subtype2" "subtype1" "subtype2"
[145] "subtype5" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype6" "subtype3" "subtype2" "subtype3" "subtype1" "subtype5"
[157] "subtype5" "subtype2" "subtype2" "subtype4" "subtype2" "subtype3"
[163] "subtype1" "subtype1" "subtype2" "subtype4" "subtype4" "subtype1"
[169] "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype4" "subtype5"
  [7] "subtype4" "subtype1" "subtype3" "subtype1" "subtype6" "subtype5"
 [13] "subtype5" "subtype4" "subtype1" "subtype5" "subtype1" "subtype4"
 [19] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype6"
 [25] "subtype4" "subtype5" "subtype5" "subtype5" "subtype1" "subtype4"
 [31] "subtype6" "subtype1" "subtype1" "subtype5" "subtype6" "subtype2"
 [37] "subtype2" "subtype5" "subtype6" "subtype4" "subtype4" "subtype5"
 [43] "subtype1" "subtype4" "subtype1" "subtype1" "subtype5" "subtype4"
 [49] "subtype6" "subtype5" "subtype4" "subtype5" "subtype2" "subtype3"
 [55] "subtype3" "subtype3" "subtype5" "subtype1" "subtype4" "subtype5"
 [61] "subtype2" "subtype5" "subtype3" "subtype4" "subtype4" "subtype3"
 [67] "subtype5" "subtype1" "subtype4" "subtype4" "subtype5" "subtype1"
 [73] "subtype3" "subtype5" "subtype4" "subtype4" "subtype4" "subtype4"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype5"
 [85] "subtype5" "subtype3" "subtype3" "subtype5" "subtype2" "subtype5"
 [91] "subtype4" "subtype1" "subtype4" "subtype6" "subtype4" "subtype4"
 [97] "subtype5" "subtype3" "subtype5" "subtype6" "subtype1" "subtype1"
[103] "subtype3" "subtype5" "subtype5" "subtype5" "subtype5" "subtype5"
[109] "subtype5" "subtype3" "subtype4" "subtype5" "subtype4" "subtype4"
[115] "subtype1" "subtype1" "subtype5" "subtype5" "subtype4" "subtype5"
[121] "subtype4" "subtype4" "subtype1" "subtype4" "subtype3" "subtype1"
[127] "subtype6" "subtype1" "subtype4" "subtype1" "subtype5" "subtype1"
[133] "subtype6" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[139] "subtype3" "subtype5" "subtype4" "subtype2" "subtype1" "subtype2"
[145] "subtype5" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype6" "subtype3" "subtype2" "subtype3" "subtype1" "subtype5"
[157] "subtype5" "subtype2" "subtype2" "subtype4" "subtype2" "subtype3"
[163] "subtype1" "subtype1" "subtype2" "subtype4" "subtype4" "subtype1"
[169] "subtype2"
D2V2, continuous
D2V3, binary
          cls
clus        0  1
  subtype1 24 24
  subtype2 10  8
  subtype3 13 13
  subtype4 18 22
  subtype5 19 29
  subtype6  5  9
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   24   24
  subtype2   10    8
  subtype3   13   13
  subtype4   18   22
  subtype5   19   29
  subtype6    5    9

Clustering(3) Variable = MRNASEQ_CNMF
D3V1, survival
          sevent
clus2       0  1
  subtype1 26 39
  subtype2 17 31
  subtype3 14 24
subtype1 subtype2 subtype3 
      65       48       38 
subtype1 subtype2 subtype3 
      39       31       24 
$subtype1
TCGA-AB-2803 TCGA-AB-2806 TCGA-AB-2807 TCGA-AB-2808 TCGA-AB-2814 TCGA-AB-2817 
       26.04        31.04         5.92        94.06        26.04         8.98 
TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2822 TCGA-AB-2830 TCGA-AB-2838 TCGA-AB-2843 
       82.06        26.99        31.96         9.04        12.00         7.07 
TCGA-AB-2845 TCGA-AB-2847 TCGA-AB-2849 TCGA-AB-2854 TCGA-AB-2857 TCGA-AB-2858 
        9.96        19.96        72.99        12.03        10.06        18.94 
TCGA-AB-2860 TCGA-AB-2863 TCGA-AB-2865 TCGA-AB-2868 TCGA-AB-2872 TCGA-AB-2875 
       14.01         1.02         2.01         4.96        20.98         6.97 
TCGA-AB-2882 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2901 
       12.00         7.04         5.95        12.92        22.06         1.91 
TCGA-AB-2904 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2917 TCGA-AB-2927 TCGA-AB-2929 
       16.96         1.02         0.99        39.98         2.93         4.04 
TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2949 
        1.97         1.94         7.07         9.96        14.96        22.98 
TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2955 TCGA-AB-2959 TCGA-AB-2964 TCGA-AB-2966 
       10.06         1.02        16.08        16.08        41.98        28.08 
TCGA-AB-2970 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 TCGA-AB-2982 TCGA-AB-2983 
       10.03        22.98        22.06        22.98         4.90        11.01 
TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2999 TCGA-AB-3000 
       60.03        56.09        50.99        51.98        57.01        41.06 
TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3012 
       51.98        47.05        27.02        18.94        62.04 

$subtype2
TCGA-AB-2805 TCGA-AB-2811 TCGA-AB-2813 TCGA-AB-2815 TCGA-AB-2816 TCGA-AB-2818 
       18.94         7.99         1.02        26.99         8.05         9.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2828 TCGA-AB-2833 TCGA-AB-2834 
        0.99         6.94        24.03        75.09        14.99         8.05 
TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2844 TCGA-AB-2846 TCGA-AB-2851 TCGA-AB-2856 
       55.00        17.00         3.98        46.09         7.96         4.90 
TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2870 TCGA-AB-2873 TCGA-AB-2880 TCGA-AB-2881 
        5.00         6.05         5.00         8.98        13.94        12.92 
TCGA-AB-2884 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2900 TCGA-AB-2911 TCGA-AB-2912 
       24.03        10.98         9.99         6.02        38.99         9.01 
TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2933 TCGA-AB-2934 
       26.04        29.00         2.96         7.96         4.01         0.92 
TCGA-AB-2942 TCGA-AB-2948 TCGA-AB-2954 TCGA-AB-2956 TCGA-AB-2965 TCGA-AB-2967 
       21.07        19.07        49.05         6.02        11.01        34.03 
TCGA-AB-2969 TCGA-AB-2973 TCGA-AB-2981 TCGA-AB-2985 TCGA-AB-2987 TCGA-AB-3005 
       37.05        20.02        16.01         8.98         6.05        69.01 

$subtype3
TCGA-AB-2810 TCGA-AB-2812 TCGA-AB-2832 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 
        1.02        12.03        12.00        15.98         0.92        46.06 
TCGA-AB-2848 TCGA-AB-2853 TCGA-AB-2855 TCGA-AB-2859 TCGA-AB-2862 TCGA-AB-2869 
       14.96         2.89         6.94         9.96        47.01         7.99 
TCGA-AB-2871 TCGA-AB-2874 TCGA-AB-2877 TCGA-AB-2879 TCGA-AB-2895 TCGA-AB-2896 
        5.03        13.02        20.98         8.05         5.03         7.00 
TCGA-AB-2897 TCGA-AB-2913 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2928 TCGA-AB-2963 
        7.99        39.98         2.01        12.03         1.94        53.95 
TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2984 TCGA-AB-2986 
       26.04         0.99        30.08         0.99        38.01         6.97 
TCGA-AB-2988 TCGA-AB-2990 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2998 TCGA-AB-3006 
        0.99        15.02        25.02        59.11         1.02        15.91 
TCGA-AB-3007 TCGA-AB-3011 
       51.98        61.97 

subtype1 subtype2 subtype3 
    0.99     0.92     0.92 
subtype1 subtype2 subtype3 
   94.06    75.09    61.97 
subtype1 subtype2 subtype3 
  16.080   10.485   12.015 
[1] "1.0 - 94.1 (16.1)" "0.9 - 75.1 (10.5)" "0.9 - 62.0 (12.0)"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
  [7] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [13] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [31] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [37] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [49] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
 [73] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
 [85] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [91] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
 [97] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[103] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[121] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[133] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[139] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[151] "subtype1"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
  [7] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [13] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [31] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [37] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [49] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
 [73] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
 [85] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [91] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
 [97] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[103] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[121] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[133] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[139] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[151] "subtype1"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
  [7] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [13] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [31] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [37] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [49] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
 [73] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
 [85] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [91] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
 [97] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[103] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[121] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[133] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[139] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[151] "subtype1"
D3V2, continuous
D3V3, binary
          cls
clus        0  1
  subtype1 31 43
  subtype2 22 32
  subtype3 27 18
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   31   43
  subtype2   22   32
  subtype3   27   18
        clus
vv       subtype1 subtype2 subtype3
  FEMALE       31       22       27
  MALE         43       32       18

Clustering(4) Variable = MRNASEQ_CHIERARCHICAL
D4V1, survival
          sevent
clus2       0  1
  subtype1 17 33
  subtype2 40 61
subtype1 subtype2 
      50      101 
subtype1 subtype2 
      33       61 
$subtype1
TCGA-AB-2805 TCGA-AB-2811 TCGA-AB-2813 TCGA-AB-2815 TCGA-AB-2816 TCGA-AB-2818 
       18.94         7.99         1.02        26.99         8.05         9.96 
TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2828 TCGA-AB-2832 TCGA-AB-2833 
        0.99         6.94        24.03        75.09        12.00        14.99 
TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2844 TCGA-AB-2846 TCGA-AB-2848 
        8.05        55.00        17.00         3.98        46.09        14.96 
TCGA-AB-2851 TCGA-AB-2856 TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2870 TCGA-AB-2873 
        7.96         4.90         2.01         5.00         5.00         8.98 
TCGA-AB-2881 TCGA-AB-2884 TCGA-AB-2888 TCGA-AB-2889 TCGA-AB-2900 TCGA-AB-2911 
       12.92        24.03        10.98         9.99         6.02        38.99 
TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2934 TCGA-AB-2942 
       26.04        29.00         2.96         7.96         0.92        21.07 
TCGA-AB-2948 TCGA-AB-2954 TCGA-AB-2956 TCGA-AB-2963 TCGA-AB-2965 TCGA-AB-2967 
       19.07        49.05         6.02        53.95        11.01        34.03 
TCGA-AB-2969 TCGA-AB-2971 TCGA-AB-2973 TCGA-AB-2977 TCGA-AB-2981 TCGA-AB-2985 
       37.05        26.04        20.02         0.99        16.01         8.98 
TCGA-AB-2987 TCGA-AB-3005 
        6.05        69.01 

$subtype2
TCGA-AB-2803 TCGA-AB-2806 TCGA-AB-2807 TCGA-AB-2808 TCGA-AB-2810 TCGA-AB-2812 
       26.04        31.04         5.92        94.06         1.02        12.03 
TCGA-AB-2814 TCGA-AB-2817 TCGA-AB-2819 TCGA-AB-2821 TCGA-AB-2822 TCGA-AB-2830 
       26.04         8.98        82.06        26.99        31.96         9.04 
TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 TCGA-AB-2845 
       12.00        15.98         0.92        46.06         7.07         9.96 
TCGA-AB-2847 TCGA-AB-2849 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2857 
       19.96        72.99         2.89        12.03         6.94        10.06 
TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2862 TCGA-AB-2863 TCGA-AB-2867 
       18.94         9.96        14.01        47.01         1.02         6.05 
TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2874 TCGA-AB-2875 
        4.96         7.99         5.03        20.98        13.02         6.97 
TCGA-AB-2877 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2882 TCGA-AB-2885 TCGA-AB-2886 
       20.98         8.05        13.94        12.00         7.04         5.95 
TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2901 
        5.03         7.00         7.99        12.92        22.06         1.91 
TCGA-AB-2904 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2917 
       16.96         1.02         0.99         9.01        39.98        39.98 
TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2933 
        2.01        12.03         2.93         1.94         4.04         4.01 
TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2939 TCGA-AB-2949 
        1.97         1.94         7.07         9.96        14.96        22.98 
TCGA-AB-2950 TCGA-AB-2952 TCGA-AB-2955 TCGA-AB-2959 TCGA-AB-2964 TCGA-AB-2966 
       10.06         1.02        16.08        16.08        41.98        28.08 
TCGA-AB-2970 TCGA-AB-2972 TCGA-AB-2976 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 
       10.03         0.99        30.08        22.98        22.06        22.98 
TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2986 TCGA-AB-2988 TCGA-AB-2990 
        4.90        11.01        38.01         6.97         0.99        15.02 
TCGA-AB-2991 TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 
       60.03        56.09        25.02        59.11        50.99        51.98 
TCGA-AB-2998 TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3006 
        1.02        57.01        41.06        51.98        47.05        15.91 
TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
       51.98        27.02        18.94        61.97        62.04 

subtype1 subtype2 
    0.92     0.92 
subtype1 subtype2 
   75.09    94.06 
subtype1 subtype2 
  11.505   12.920 
[1] "0.9 - 75.1 (11.5)" "0.9 - 94.1 (12.9)"
  [1] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [43] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [55] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [61] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
 [67] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
 [85] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[103] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[115] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[121] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[127] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype2"
  [1] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [43] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [55] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [61] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
 [67] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
 [85] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[103] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[115] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[121] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[127] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype2"
  [1] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [43] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [55] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [61] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
 [67] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
 [85] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[103] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[115] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[121] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[127] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype2"
[1] "hr=" "1.2"
D4V2, continuous
D4V3, binary
          cls
clus        0  1
  subtype1 27 32
  subtype2 53 61
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   27   32
  subtype2   53   61
        clus
vv       subtype1 subtype2
  FEMALE       27       53
  MALE         32       61

Clustering(5) Variable = MIRSEQ_CNMF
D5V1, survival
          sevent
clus2       0  1
  subtype1 21 54
  subtype2 18 18
  subtype3 23 29
subtype1 subtype2 subtype3 
      75       36       52 
subtype1 subtype2 subtype3 
      54       18       29 
$subtype1
TCGA-AB-2802 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2814 TCGA-AB-2816 
       12.00         1.02         7.99        12.03        26.04         8.05 
TCGA-AB-2818 TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2830 
        9.96        31.96         0.99         6.94        24.03         9.04 
TCGA-AB-2832 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2839 TCGA-AB-2844 
       12.00         8.05        55.00        17.00        15.98         3.98 
TCGA-AB-2848 TCGA-AB-2849 TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2855 TCGA-AB-2856 
       14.96        72.99         7.96         2.89         6.94         4.90 
TCGA-AB-2859 TCGA-AB-2863 TCGA-AB-2866 TCGA-AB-2869 TCGA-AB-2871 TCGA-AB-2873 
        9.96         1.02         5.00         7.99         5.03         8.98 
TCGA-AB-2877 TCGA-AB-2879 TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2893 TCGA-AB-2894 
       20.98         8.05        24.00        24.03         6.97         5.92 
TCGA-AB-2895 TCGA-AB-2899 TCGA-AB-2900 TCGA-AB-2904 TCGA-AB-2911 TCGA-AB-2913 
        5.03        22.06         6.02        16.96        38.99        39.98 
TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2933 
        2.01        12.03         1.02         2.96         7.96         4.01 
TCGA-AB-2934 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2956 TCGA-AB-2963 TCGA-AB-2965 
        0.92         7.99         1.02         6.02        53.95        11.01 
TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2969 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 
       28.08        34.03        37.05        26.04         0.99        20.02 
TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2981 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 
       30.08         0.99        16.01        38.01         8.98         6.97 
TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2992 TCGA-AB-2993 
        6.05         0.99        12.00        15.02        56.09        25.02 
TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3011 
       69.01        15.91        61.97 

$subtype2
TCGA-AB-2803 TCGA-AB-2821 TCGA-AB-2838 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 
       26.04        26.99        12.00         0.92        46.06         7.07 
TCGA-AB-2847 TCGA-AB-2857 TCGA-AB-2860 TCGA-AB-2865 TCGA-AB-2867 TCGA-AB-2868 
       19.96        10.06        14.01         2.01         6.05         4.96 
TCGA-AB-2872 TCGA-AB-2874 TCGA-AB-2878 TCGA-AB-2885 TCGA-AB-2888 TCGA-AB-2897 
       20.98        13.02        12.00         7.04        10.98         7.99 
TCGA-AB-2898 TCGA-AB-2917 TCGA-AB-2929 TCGA-AB-2935 TCGA-AB-2939 TCGA-AB-2948 
       12.92        39.98         4.04         1.97        14.96        19.07 
TCGA-AB-2949 TCGA-AB-2952 TCGA-AB-2978 TCGA-AB-2980 TCGA-AB-2982 TCGA-AB-2991 
       22.98         1.02        22.98        22.98         4.90        60.03 
TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2999 TCGA-AB-3001 TCGA-AB-3007 TCGA-AB-3012 
       59.11        50.99        57.01        51.98        51.98        62.04 

$subtype3
TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 TCGA-AB-2808 TCGA-AB-2813 TCGA-AB-2815 
       18.94        31.04         5.92        94.06         1.02        26.99 
TCGA-AB-2817 TCGA-AB-2819 TCGA-AB-2828 TCGA-AB-2833 TCGA-AB-2845 TCGA-AB-2846 
        8.98        82.06        75.09        14.99         9.96        46.09 
TCGA-AB-2854 TCGA-AB-2858 TCGA-AB-2862 TCGA-AB-2870 TCGA-AB-2875 TCGA-AB-2876 
       12.03        18.94        47.01         5.00         6.97        40.08 
TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 TCGA-AB-2886 TCGA-AB-2889 TCGA-AB-2892 
       13.94        12.92        12.00         5.95         9.99        30.97 
TCGA-AB-2901 TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2912 TCGA-AB-2914 TCGA-AB-2916 
        1.91         1.02         0.99         9.01        26.04        29.00 
TCGA-AB-2926 TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 
       14.99         2.93         1.94         1.94         7.07         9.96 
TCGA-AB-2942 TCGA-AB-2950 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2957 TCGA-AB-2959 
       21.07        10.06        49.05        16.08        19.99        16.08 
TCGA-AB-2964 TCGA-AB-2970 TCGA-AB-2979 TCGA-AB-2983 TCGA-AB-2996 TCGA-AB-2998 
       41.98        10.03        22.06        11.01        51.98         1.02 
TCGA-AB-3000 TCGA-AB-3002 TCGA-AB-3008 TCGA-AB-3009 
       41.06        47.05        27.02        18.94 

subtype1 subtype2 subtype3 
    0.92     0.92     0.99 
subtype1 subtype2 subtype3 
   72.99    62.04    94.06 
subtype1 subtype2 subtype3 
   9.960   14.485   14.990 
[1] "0.9 - 73.0 (10.0)" "0.9 - 62.0 (14.5)" "1.0 - 94.1 (15.0)"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [13] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [25] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [37] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [49] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [55] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [73] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [85] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[115] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[121] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[151] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[163] "subtype2"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [13] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [25] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [37] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [49] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [55] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [73] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [85] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[115] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[121] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[151] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[163] "subtype2"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [13] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [25] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [37] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [49] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [55] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [73] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [85] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[115] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[121] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[151] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[163] "subtype2"
D5V2, continuous
D5V3, binary
          cls
clus        0  1
  subtype1 39 47
  subtype2 17 23
  subtype3 30 31
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   39   47
  subtype2   17   23
  subtype3   30   31
        clus
vv       subtype1 subtype2 subtype3
  FEMALE       39       17       30
  MALE         47       23       31

Clustering(6) Variable = MIRSEQ_CHIERARCHICAL
D6V1, survival
          sevent
clus2       0  1
  subtype1 18 16
  subtype2 21 50
  subtype3 23 35
subtype1 subtype2 subtype3 
      34       71       58 
subtype1 subtype2 subtype3 
      16       50       35 
$subtype1
TCGA-AB-2803 TCGA-AB-2821 TCGA-AB-2838 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2843 
       26.04        26.99        12.00         0.92        46.06         7.07 
TCGA-AB-2857 TCGA-AB-2860 TCGA-AB-2865 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2872 
       10.06        14.01         2.01         6.05         4.96        20.98 
TCGA-AB-2874 TCGA-AB-2878 TCGA-AB-2885 TCGA-AB-2888 TCGA-AB-2897 TCGA-AB-2898 
       13.02        12.00         7.04        10.98         7.99        12.92 
TCGA-AB-2917 TCGA-AB-2929 TCGA-AB-2935 TCGA-AB-2939 TCGA-AB-2949 TCGA-AB-2952 
       39.98         4.04         1.97        14.96        22.98         1.02 
TCGA-AB-2978 TCGA-AB-2980 TCGA-AB-2991 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 
       22.98        22.98        60.03        59.11        50.99        51.98 
TCGA-AB-2999 TCGA-AB-3001 TCGA-AB-3007 TCGA-AB-3012 
       57.01        51.98        51.98        62.04 

$subtype2
TCGA-AB-2802 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2816 TCGA-AB-2818 
       12.00         1.02         7.99        12.03         8.05         9.96 
TCGA-AB-2822 TCGA-AB-2824 TCGA-AB-2825 TCGA-AB-2826 TCGA-AB-2830 TCGA-AB-2832 
       31.96         0.99         6.94        24.03         9.04        12.00 
TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2839 TCGA-AB-2844 TCGA-AB-2848 
        8.05        55.00        17.00        15.98         3.98        14.96 
TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2856 TCGA-AB-2859 TCGA-AB-2863 TCGA-AB-2866 
        7.96         2.89         4.90         9.96         1.02         5.00 
TCGA-AB-2869 TCGA-AB-2871 TCGA-AB-2873 TCGA-AB-2877 TCGA-AB-2879 TCGA-AB-2883 
        7.99         5.03         8.98        20.98         8.05        24.00 
TCGA-AB-2884 TCGA-AB-2893 TCGA-AB-2894 TCGA-AB-2895 TCGA-AB-2900 TCGA-AB-2904 
       24.03         6.97         5.92         5.03         6.02        16.96 
TCGA-AB-2911 TCGA-AB-2913 TCGA-AB-2919 TCGA-AB-2920 TCGA-AB-2923 TCGA-AB-2924 
       38.99        39.98         2.01        12.03         1.02         2.96 
TCGA-AB-2925 TCGA-AB-2928 TCGA-AB-2934 TCGA-AB-2945 TCGA-AB-2947 TCGA-AB-2956 
        7.96         1.94         0.92         7.99         1.02         6.02 
TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2969 
       53.95        41.98        11.01        28.08        34.03        37.05 
TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2976 TCGA-AB-2981 TCGA-AB-2984 
       26.04         0.99        20.02        30.08        16.01        38.01 
TCGA-AB-2985 TCGA-AB-2986 TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 
        8.98         6.97         6.05         0.99        12.00        15.02 
TCGA-AB-2992 TCGA-AB-2993 TCGA-AB-3005 TCGA-AB-3006 TCGA-AB-3011 
       56.09        25.02        69.01        15.91        61.97 

$subtype3
TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 TCGA-AB-2808 TCGA-AB-2813 TCGA-AB-2814 
       18.94        31.04         5.92        94.06         1.02        26.04 
TCGA-AB-2815 TCGA-AB-2817 TCGA-AB-2819 TCGA-AB-2828 TCGA-AB-2833 TCGA-AB-2845 
       26.99         8.98        82.06        75.09        14.99         9.96 
TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2849 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2858 
       46.09        19.96        72.99        12.03         6.94        18.94 
TCGA-AB-2862 TCGA-AB-2870 TCGA-AB-2875 TCGA-AB-2876 TCGA-AB-2880 TCGA-AB-2881 
       47.01         5.00         6.97        40.08        13.94        12.92 
TCGA-AB-2882 TCGA-AB-2886 TCGA-AB-2889 TCGA-AB-2892 TCGA-AB-2899 TCGA-AB-2901 
       12.00         5.95         9.99        30.97        22.06         1.91 
TCGA-AB-2908 TCGA-AB-2909 TCGA-AB-2912 TCGA-AB-2914 TCGA-AB-2916 TCGA-AB-2926 
        1.02         0.99         9.01        26.04        29.00        14.99 
TCGA-AB-2927 TCGA-AB-2933 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 TCGA-AB-2942 
        2.93         4.01         1.94         7.07         9.96        21.07 
TCGA-AB-2948 TCGA-AB-2950 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2957 TCGA-AB-2959 
       19.07        10.06        49.05        16.08        19.99        16.08 
TCGA-AB-2970 TCGA-AB-2977 TCGA-AB-2979 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2998 
       10.03         0.99        22.06         4.90        11.01         1.02 
TCGA-AB-3000 TCGA-AB-3002 TCGA-AB-3008 TCGA-AB-3009 
       41.06        47.05        27.02        18.94 

subtype1 subtype2 subtype3 
    0.92     0.92     0.99 
subtype1 subtype2 subtype3 
   62.04    69.01    94.06 
subtype1 subtype2 subtype3 
  14.485    9.960   14.990 
[1] "0.9 - 62.0 (14.5)" "0.9 - 69.0 (10.0)" "1.0 - 94.1 (15.0)"
  [1] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [13] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [37] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [43] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [55] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
 [67] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
 [73] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [91] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[103] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[109] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[115] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[151] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[157] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[163] "subtype1"
  [1] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [13] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [37] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [43] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [55] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
 [67] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
 [73] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [91] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[103] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[109] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[115] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[151] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[157] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[163] "subtype1"
  [1] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [13] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [37] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [43] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [55] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
 [67] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
 [73] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [91] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[103] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[109] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[115] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[151] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[157] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[163] "subtype1"
D6V2, continuous
D6V3, binary
          cls
clus        0  1
  subtype1 16 22
  subtype2 40 42
  subtype3 30 37
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   16   22
  subtype2   40   42
  subtype3   30   37
        clus
vv       subtype1 subtype2 subtype3
  FEMALE       16       40       30
  MALE         22       42       37
           V1.D              V2              V3 
"Time to Death"           "AGE"        "GENDER" 
> q(save="no")
