
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/376728/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/OV-TP/2909440/1.GDAC_mergedClustering.Finished/OV-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=OV-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"       "-oT=OV-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=586, in cluster file=569, common to both=569
[1]  69 569
[1] "Amp Peak  1(1p34.3) mutation analysis"
[1] 3
  AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE 
                          282                           287 
  AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE 
                          282                           287 
[1] "Amp Peak  2(1q21.3) mutation analysis"
[1] 3
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                          356                           213 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                          356                           213 
[1] "Amp Peak  3(1q42.2) mutation analysis"
[1] 3
  AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE 
                          312                           257 
  AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE 
                          312                           257 
[1] "Amp Peak  4(2p23.2) mutation analysis"
[1] 3
  AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE 
                          239                           330 
  AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE 
                          239                           330 
[1] "Amp Peak  5(2q31.2) mutation analysis"
[1] 3
  AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE 
                          250                           319 
  AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE 
                          250                           319 
[1] "Amp Peak  6(3q26.2) mutation analysis"
[1] 3
  AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE 
                          473                            96 
  AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE 
                          473                            96 
[1] "Amp Peak  7(4p16.3) mutation analysis"
[1] 3
  AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE 
                          156                           413 
  AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE 
                          156                           413 
[1] "Amp Peak  8(4q13.3) mutation analysis"
[1] 3
  AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE 
                          106                           463 
  AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE 
                          106                           463 
[1] "Amp Peak  9(5p15.33) mutation analysis"
[1] 3
  AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE 
                           299                            270 
  AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE 
                           299                            270 
[1] "Amp Peak 10(6p22.3) mutation analysis"
[1] 3
  AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE 
                          291                           278 
  AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE 
                          291                           278 
[1] "Amp Peak 11(7q36.3) mutation analysis"
[1] 3
  AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE 
                          304                           265 
  AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE 
                          304                           265 
[1] "Amp Peak 12(8p11.21) mutation analysis"
[1] 3
  AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE 
                           202                            367 
  AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE 
                           202                            367 
[1] "Amp Peak 13(8q24.21) mutation analysis"
[1] 3
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                           447                            122 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                           447                            122 
[1] "Amp Peak 14(10p15.3) mutation analysis"
[1] 3
  AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE 
                           241                            328 
  AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE 
                           241                            328 
[1] "Amp Peak 15(10q22.3) mutation analysis"
[1] 3
  AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE 
                           176                            393 
  AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE 
                           176                            393 
[1] "Amp Peak 16(11q14.1) mutation analysis"
[1] 3
  AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE 
                           251                            318 
  AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE 
                           251                            318 
[1] "Amp Peak 17(12p13.33) mutation analysis"
[1] 3
  AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE 
                            318                             251 
  AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE 
                            318                             251 
[1] "Amp Peak 18(12p12.1) mutation analysis"
[1] 3
  AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE 
                           301                            268 
  AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE 
                           301                            268 
[1] "Amp Peak 19(14q11.2) mutation analysis"
[1] 3
  AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE 
                           144                            425 
  AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE 
                           144                            425 
[1] "Amp Peak 20(14q32.33) mutation analysis"
[1] 3
  AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE 
                            151                             418 
  AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE 
                            151                             418 
[1] "Amp Peak 21(15q26.3) mutation analysis"
[1] 3
  AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE 
                           157                            412 
  AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE 
                           157                            412 
[1] "Amp Peak 22(17q25.3) mutation analysis"
[1] 3
  AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE 
                           207                            362 
  AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE 
                           207                            362 
[1] "Amp Peak 23(18q11.2) mutation analysis"
[1] 3
  AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE 
                           139                            430 
  AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE 
                           139                            430 
[1] "Amp Peak 24(19p13.12) mutation analysis"
[1] 3
  AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE 
                            306                             263 
  AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE 
                            306                             263 
[1] "Amp Peak 25(19q12) mutation analysis"
[1] 3
  AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE 
                         314                          255 
  AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE 
                         314                          255 
[1] "Amp Peak 26(19q13.2) mutation analysis"
[1] 3
  AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE 
                           238                            331 
  AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE 
                           238                            331 
[1] "Amp Peak 27(20p13) mutation analysis"
[1] 3
  AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE 
                         310                          259 
  AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE 
                         310                          259 
[1] "Amp Peak 28(20q11.21) mutation analysis"
[1] 3
  AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE 
                            332                             237 
  AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE 
                            332                             237 
[1] "Amp Peak 29(20q13.33) mutation analysis"
[1] 3
  AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE 
                            392                             177 
  AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE 
                            392                             177 
[1] "Amp Peak 30(22q12.2) mutation analysis"
[1] 3
  AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE 
                            88                            481 
  AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE 
                            88                            481 
[1] "Amp Peak 31(Xp11.23) mutation analysis"
[1] 3
  AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE 
                           163                            406 
  AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE 
                           163                            406 
[1] "Amp Peak 32(Xq28) mutation analysis"
[1] 3
  AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE 
                        224                         345 
  AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE 
                        224                         345 
[1] "Del Peak  1(1p36.11) mutation analysis"
[1] 3
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                           265                            304 
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                           265                            304 
[1] "Del Peak  2(1q32.3) mutation analysis"
[1] 3
  DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE 
                           95                           474 
  DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE 
                           95                           474 
[1] "Del Peak  3(2p25.3) mutation analysis"
[1] 3
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                          118                           451 
  DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE 
                          118                           451 
[1] "Del Peak  4(2q22.1) mutation analysis"
[1] 3
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                          134                           435 
  DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE 
                          134                           435 
[1] "Del Peak  5(2q37.3) mutation analysis"
[1] 3
  DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE 
                          174                           395 
  DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE 
                          174                           395 
[1] "Del Peak  6(3p26.2) mutation analysis"
[1] 3
  DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE 
                          210                           359 
  DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE 
                          210                           359 
[1] "Del Peak  7(4q22.1) mutation analysis"
[1] 3
  DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE 
                          383                           186 
  DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE 
                          383                           186 
[1] "Del Peak  8(4q34.3) mutation analysis"
[1] 3
  DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE 
                          412                           157 
  DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE 
                          412                           157 
[1] "Del Peak  9(5q11.2) mutation analysis"
[1] 3
  DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE 
                          341                           228 
  DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE 
                          341                           228 
[1] "Del Peak 10(5q13.2) mutation analysis"
[1] 3
  DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE 
                          406                           163 
  DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE 
                          406                           163 
[1] "Del Peak 11(6q27) mutation analysis"
[1] 3
  DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE 
                        381                         188 
  DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE 
                        381                         188 
[1] "Del Peak 12(7p22.1) mutation analysis"
[1] 3
  DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE 
                          247                           322 
  DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE 
                          247                           322 
[1] "Del Peak 13(8p23.3) mutation analysis"
[1] 3
  DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE 
                          381                           188 
  DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE 
                          381                           188 
[1] "Del Peak 14(8p21.2) mutation analysis"
[1] 3
  DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE 
                          398                           171 
  DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE 
                          398                           171 
[1] "Del Peak 15(9p24.3) mutation analysis"
[1] 3
  DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE 
                          255                           314 
  DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE 
                          255                           314 
[1] "Del Peak 16(9q34.13) mutation analysis"
[1] 3
  DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE 
                           337                            232 
  DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE 
                           337                            232 
[1] "Del Peak 17(10p15.3) mutation analysis"
[1] 3
  DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE 
                           121                            448 
  DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE 
                           121                            448 
[1] "Del Peak 18(10q23.31) mutation analysis"
[1] 3
  DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE 
                            220                             349 
  DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE 
                            220                             349 
[1] "Del Peak 19(10q26.3) mutation analysis"
[1] 3
  DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE 
                           189                            380 
  DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE 
                           189                            380 
[1] "Del Peak 20(11p15.5) mutation analysis"
[1] 3
  DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE 
                           338                            231 
  DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE 
                           338                            231 
[1] "Del Peak 21(11q25) mutation analysis"
[1] 3
  DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE 
                         195                          374 
  DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE 
                         195                          374 
[1] "Del Peak 22(12q24.33) mutation analysis"
[1] 3
  DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE 
                            217                             352 
  DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE 
                            217                             352 
[1] "Del Peak 23(13q14.2) mutation analysis"
[1] 3
  DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE 
                           355                            214 
  DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE 
                           355                            214 
[1] "Del Peak 24(14q23.3) mutation analysis"
[1] 3
  DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE 
                           298                            271 
  DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE 
                           298                            271 
[1] "Del Peak 25(15q15.1) mutation analysis"
[1] 3
  DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE 
                           357                            212 
  DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE 
                           357                            212 
[1] "Del Peak 26(16p13.3) mutation analysis"
[1] 3
  DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE 
                           303                            266 
  DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE 
                           303                            266 
[1] "Del Peak 27(16q22.1) mutation analysis"
[1] 3
  DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE 
                           451                            118 
  DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE 
                           451                            118 
[1] "Del Peak 28(16q23.1) mutation analysis"
[1] 3
  DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE 
                           442                            127 
  DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE 
                           442                            127 
[1] "Del Peak 29(17p12) mutation analysis"
[1] 3
  DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE 
                         481                           88 
  DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE 
                         481                           88 
[1] "Del Peak 30(17q11.2) mutation analysis"
[1] 3
  DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE 
                           466                            103 
  DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE 
                           466                            103 
[1] "Del Peak 31(18q23) mutation analysis"
[1] 3
  DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE 
                         373                          196 
  DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE 
                         373                          196 
[1] "Del Peak 32(19p13.3) mutation analysis"
[1] 3
  DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE 
                           502                             67 
  DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE 
                           502                             67 
[1] "Del Peak 33(19q13.33) mutation analysis"
[1] 3
  DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE 
                            295                             274 
  DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE 
                            295                             274 
[1] "Del Peak 34(19q13.43) mutation analysis"
[1] 3
  DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE 
                            280                             289 
  DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE 
                            280                             289 
[1] "Del Peak 35(21q22.3) mutation analysis"
[1] 3
  DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE 
                           221                            348 
  DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE 
                           221                            348 
[1] "Del Peak 36(22q13.32) mutation analysis"
[1] 3
  DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE 
                            493                              76 
  DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE 
                            493                              76 
[1] "Del Peak 37(Xp21.1) mutation analysis"
[1] 3
  DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE 
                          364                           205 
  DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE 
                          364                           205 
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"             "MRNA_CHIERARCHICAL"    "MIR_CNMF"             
 [4] "MIR_CHIERARCHICAL"     "CN_CNMF"               "METHLYATION_CNMF"     
 [7] "RPPA_CNMF"             "RPPA_CHIERARCHICAL"    "MRNASEQ_CNMF"         
[10] "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 

Input Data has 12 rows and 569 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MIR_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MIR_CHIERARCHICAL':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'RPPA_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'RPPA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "MRNA_CNMF"             "MRNA_CHIERARCHICAL"    "MIR_CNMF"             
 [4] "MIR_CHIERARCHICAL"     "CN_CNMF"               "METHLYATION_CNMF"     
 [7] "RPPA_CNMF"             "RPPA_CHIERARCHICAL"    "MRNASEQ_CNMF"         
[10] "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 569 columns, 0 survival variables, and 12 non-survival variables.
MRNA_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIR_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIR_CHIERARCHICAL, nv=6, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1p34.3) mutation analysis
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          98                           117
  CLUS_2                         116                            97
  CLUS_3                          63                            66
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                         119                           114
  CLUS_2                          96                           103
  CLUS_3                          62                            63
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          77                            82
  CLUS_2                          73                            91
  CLUS_3                         126                           106
D1V4, multiclass
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          55                           111
  CLUS_2                         114                            90
  CLUS_3                         113                            86
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          94                            77
  CLUS_2                          78                            98
  CLUS_3                         110                           111
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          50                            70
  CLUS_2                         105                            91
  CLUS_3                          41                            41
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          31                            26
  CLUS_2                          43                            41
  CLUS_3                          51                            57
  CLUS_4                          71                            78
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          55                            45
  CLUS_2                          32                            35
  CLUS_3                          45                            46
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          48                            62
  CLUS_2                          61                            49
  CLUS_3                          23                            15
D1V11, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                          55                            66
  CLUS_2                         106                            76
  CLUS_3                          71                            73
D1V12, multiclass
        clus
vv       AMP PEAK  1(1P34.3) MUTATED AMP PEAK  1(1P34.3) WILD-TYPE
  CLUS_1                           5                             0
  CLUS_2                         147                           134
  CLUS_3                          80                            81

Clustering(2) Variable = Amp Peak  2(1q21.3) mutation analysis
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                         144                            71
  CLUS_2                         130                            83
  CLUS_3                          75                            54
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                         135                            98
  CLUS_2                         137                            62
  CLUS_3                          77                            48
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          97                            62
  CLUS_2                         100                            64
  CLUS_3                         150                            82
D2V4, multiclass
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          83                            83
  CLUS_2                         111                            93
  CLUS_3                         162                            37
D2V6, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                         125                            46
  CLUS_2                          91                            85
  CLUS_3                         140                            81
D2V7, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          69                            51
  CLUS_2                         133                            63
  CLUS_3                          45                            37
D2V8, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          39                            18
  CLUS_2                          45                            39
  CLUS_3                          79                            29
  CLUS_4                          84                            65
D2V9, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          63                            37
  CLUS_2                          41                            26
  CLUS_3                          62                            29
D2V10, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          73                            37
  CLUS_2                          73                            37
  CLUS_3                          20                            18
D2V11, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                          77                            44
  CLUS_2                         114                            68
  CLUS_3                          88                            56
D2V12, multiclass
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                         176                           105
  CLUS_3                         100                            61

Clustering(3) Variable = Amp Peak  3(1q42.2) mutation analysis
D3V1, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                         132                            83
  CLUS_2                         103                           110
  CLUS_3                          68                            61
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                         118                           115
  CLUS_2                         123                            76
  CLUS_3                          62                            63
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                          85                            74
  CLUS_2                          89                            75
  CLUS_3                         128                           104
D3V4, multiclass
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                          85                            81
  CLUS_2                          85                           119
  CLUS_3                         142                            57
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                         118                            53
  CLUS_2                          86                            90
  CLUS_3                         108                           113
D3V7, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                          68                            52
  CLUS_2                         110                            86
  CLUS_3                          38                            44
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                          26                            31
  CLUS_2                          44                            40
  CLUS_3                          67                            41
  CLUS_4                          79                            70
D3V9, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                          55                            45
  CLUS_2                          37                            30
  CLUS_3                          56                            35
D3V10, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                          66                            44
  CLUS_2                          58                            52
  CLUS_3                          24                            14
D3V11, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                          69                            52
  CLUS_2                          89                            93
  CLUS_3                          84                            60
D3V12, multiclass
        clus
vv       AMP PEAK  3(1Q42.2) MUTATED AMP PEAK  3(1Q42.2) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                         144                           137
  CLUS_3                          95                            66

Clustering(4) Variable = Amp Peak  4(2p23.2) mutation analysis
D4V1, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                          99                           116
  CLUS_2                          84                           129
  CLUS_3                          52                            77
D4V2, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                          87                           146
  CLUS_2                          99                           100
  CLUS_3                          49                            76
D4V3, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                          62                            97
  CLUS_2                          73                            91
  CLUS_3                         100                           132
D4V4, multiclass
D4V5, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                          41                           125
  CLUS_2                          86                           118
  CLUS_3                         112                            87
D4V6, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                          88                            83
  CLUS_2                          60                           116
  CLUS_3                          90                           131
D4V7, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                          49                            71
  CLUS_2                          89                           107
  CLUS_3                          28                            54
D4V8, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                          20                            37
  CLUS_2                          35                            49
  CLUS_3                          49                            59
  CLUS_4                          62                            87
D4V9, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                          44                            56
  CLUS_2                          22                            45
  CLUS_3                          49                            42
D4V10, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                          51                            59
  CLUS_2                          46                            64
  CLUS_3                          18                            20
D4V11, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                          52                            69
  CLUS_2                          74                           108
  CLUS_3                          61                            83
D4V12, multiclass
        clus
vv       AMP PEAK  4(2P23.2) MUTATED AMP PEAK  4(2P23.2) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                         115                           166
  CLUS_3                          72                            89

Clustering(5) Variable = Amp Peak  5(2q31.2) mutation analysis
D5V1, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                         105                           110
  CLUS_2                          92                           121
  CLUS_3                          47                            82
D5V2, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                          97                           136
  CLUS_2                         105                            94
  CLUS_3                          42                            83
D5V3, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                          69                            90
  CLUS_2                          61                           103
  CLUS_3                         113                           119
D5V4, multiclass
D5V5, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                          37                           129
  CLUS_2                         100                           104
  CLUS_3                         113                            86
D5V6, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                          94                            77
  CLUS_2                          66                           110
  CLUS_3                          89                           132
D5V7, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                          53                            67
  CLUS_2                          95                           101
  CLUS_3                          27                            55
D5V8, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                          28                            29
  CLUS_2                          41                            43
  CLUS_3                          43                            65
  CLUS_4                          63                            86
D5V9, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                          42                            58
  CLUS_2                          26                            41
  CLUS_3                          47                            44
D5V10, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                          52                            58
  CLUS_2                          49                            61
  CLUS_3                          14                            24
D5V11, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                          57                            64
  CLUS_2                          84                            98
  CLUS_3                          58                            86
D5V12, multiclass
        clus
vv       AMP PEAK  5(2Q31.2) MUTATED AMP PEAK  5(2Q31.2) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                         130                           151
  CLUS_3                          67                            94

Clustering(6) Variable = Amp Peak  6(3q26.2) mutation analysis
D6V1, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                         166                            49
  CLUS_2                         187                            26
  CLUS_3                         110                            19
D6V2, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                         208                            25
  CLUS_2                         160                            39
  CLUS_3                          95                            30
D6V3, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                         134                            25
  CLUS_2                         135                            29
  CLUS_3                         193                            39
D6V4, multiclass
D6V5, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                         110                            56
  CLUS_2                         177                            27
  CLUS_3                         186                            13
D6V6, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                         150                            21
  CLUS_2                         136                            40
  CLUS_3                         186                            35
D6V7, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          95                            25
  CLUS_2                         160                            36
  CLUS_3                          70                            12
D6V8, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          47                            10
  CLUS_2                          64                            20
  CLUS_3                          90                            18
  CLUS_4                         124                            25
D6V9, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          91                             9
  CLUS_2                          57                            10
  CLUS_3                          69                            22
D6V10, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          85                            25
  CLUS_2                          98                            12
  CLUS_3                          34                             4
D6V11, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          99                            22
  CLUS_2                         159                            23
  CLUS_3                         114                            30
D6V12, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                         238                            43
  CLUS_3                         130                            31

Clustering(7) Variable = Amp Peak  7(4p16.3) mutation analysis
D7V1, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          60                           155
  CLUS_2                          58                           155
  CLUS_3                          34                            95
D7V2, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          68                           165
  CLUS_2                          61                           138
  CLUS_3                          23                           102
D7V3, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          42                           117
  CLUS_2                          35                           129
  CLUS_3                          75                           157
D7V4, multiclass
D7V5, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          30                           136
  CLUS_2                          78                           126
  CLUS_3                          48                           151
D7V6, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          57                           114
  CLUS_2                          53                           123
  CLUS_3                          45                           176
D7V7, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          28                            92
  CLUS_2                          62                           134
  CLUS_3                          26                            56
D7V8, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          15                            42
  CLUS_2                          24                            60
  CLUS_3                          29                            79
  CLUS_4                          48                           101
D7V9, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          29                            71
  CLUS_2                          20                            47
  CLUS_3                          31                            60
D7V10, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          38                            72
  CLUS_2                          33                            77
  CLUS_3                           9                            29
D7V11, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                          34                            87
  CLUS_2                          54                           128
  CLUS_3                          36                           108
D7V12, multiclass
        clus
vv       AMP PEAK  7(4P16.3) MUTATED AMP PEAK  7(4P16.3) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                          80                           201
  CLUS_3                          42                           119

Clustering(8) Variable = Amp Peak  8(4q13.3) mutation analysis
D8V1, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          40                           175
  CLUS_2                          42                           171
  CLUS_3                          23                           106
D8V2, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          49                           184
  CLUS_2                          40                           159
  CLUS_3                          16                           109
D8V3, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          33                           126
  CLUS_2                          25                           139
  CLUS_3                          47                           185
D8V4, multiclass
D8V5, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          13                           153
  CLUS_2                          54                           150
  CLUS_3                          39                           160
D8V6, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          40                           131
  CLUS_2                          30                           146
  CLUS_3                          36                           185
D8V7, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          18                           102
  CLUS_2                          43                           153
  CLUS_3                          15                            67
D8V8, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          11                            46
  CLUS_2                          22                            62
  CLUS_3                          22                            86
  CLUS_4                          21                           128
D8V9, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          21                            79
  CLUS_2                          19                            48
  CLUS_3                          14                            77
D8V10, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          23                            87
  CLUS_2                          24                            86
  CLUS_3                           7                            31
D8V11, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                          23                            98
  CLUS_2                          35                           147
  CLUS_3                          29                           115
D8V12, multiclass
        clus
vv       AMP PEAK  8(4Q13.3) MUTATED AMP PEAK  8(4Q13.3) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                          53                           228
  CLUS_3                          31                           130

Clustering(9) Variable = Amp Peak  9(5p15.33) mutation analysis
D9V1, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                          111                            104
  CLUS_2                          115                             98
  CLUS_3                           67                             62
D9V2, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                          127                            106
  CLUS_2                          106                             93
  CLUS_3                           60                             65
D9V3, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           89                             70
  CLUS_2                           83                             81
  CLUS_3                          122                            110
D9V4, multiclass
D9V5, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           57                            109
  CLUS_2                          120                             84
  CLUS_3                          122                             77
D9V6, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           97                             74
  CLUS_2                           83                             93
  CLUS_3                          119                            102
D9V7, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           62                             58
  CLUS_2                          104                             92
  CLUS_3                           43                             39
D9V8, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           32                             25
  CLUS_2                           38                             46
  CLUS_3                           60                             48
  CLUS_4                           79                             70
D9V9, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           57                             43
  CLUS_2                           40                             27
  CLUS_3                           42                             49
D9V10, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           58                             52
  CLUS_2                           61                             49
  CLUS_3                           20                             18
D9V11, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                           60                             61
  CLUS_2                          114                             68
  CLUS_3                           69                             75
D9V12, multiclass
        clus
vv       AMP PEAK  9(5P15.33) MUTATED AMP PEAK  9(5P15.33) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                          159                            122
  CLUS_3                           81                             80

Clustering(10) Variable = Amp Peak 10(6p22.3) mutation analysis
D10V1, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                         116                            99
  CLUS_2                         113                           100
  CLUS_3                          56                            73
D10V2, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                         124                           109
  CLUS_2                         111                            88
  CLUS_3                          50                            75
D10V3, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          73                            86
  CLUS_2                          86                            78
  CLUS_3                         126                           106
D10V4, multiclass
D10V5, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          53                           113
  CLUS_2                         125                            79
  CLUS_3                         113                            86
D10V6, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          99                            72
  CLUS_2                          78                            98
  CLUS_3                         114                           107
D10V7, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          65                            55
  CLUS_2                         103                            93
  CLUS_3                          32                            50
D10V8, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          21                            36
  CLUS_2                          41                            43
  CLUS_3                          52                            56
  CLUS_4                          86                            63
D10V9, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          50                            50
  CLUS_2                          33                            34
  CLUS_3                          49                            42
D10V10, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          53                            57
  CLUS_2                          53                            57
  CLUS_3                          26                            12
D10V11, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                          55                            66
  CLUS_2                          98                            84
  CLUS_3                          77                            67
D10V12, multiclass
        clus
vv       AMP PEAK 10(6P22.3) MUTATED AMP PEAK 10(6P22.3) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                         141                           140
  CLUS_3                          85                            76

Clustering(11) Variable = Amp Peak 11(7q36.3) mutation analysis
D11V1, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                         119                            96
  CLUS_2                         123                            90
  CLUS_3                          57                            72
D11V2, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                         125                           108
  CLUS_2                         112                            87
  CLUS_3                          62                            63
D11V3, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                          92                            67
  CLUS_2                          80                            84
  CLUS_3                         126                           106
D11V4, multiclass
D11V5, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                          63                           103
  CLUS_2                         121                            83
  CLUS_3                         120                            79
D11V6, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                         100                            71
  CLUS_2                          86                            90
  CLUS_3                         118                           103
D11V7, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                          55                            65
  CLUS_2                         112                            84
  CLUS_3                          37                            45
D11V8, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                          33                            24
  CLUS_2                          47                            37
  CLUS_3                          57                            51
  CLUS_4                          67                            82
D11V9, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                          51                            49
  CLUS_2                          33                            34
  CLUS_3                          47                            44
D11V10, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                          53                            57
  CLUS_2                          57                            53
  CLUS_3                          21                            17
D11V11, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                          59                            62
  CLUS_2                          94                            88
  CLUS_3                          86                            58
D11V12, multiclass
        clus
vv       AMP PEAK 11(7Q36.3) MUTATED AMP PEAK 11(7Q36.3) WILD-TYPE
  CLUS_1                           4                             1
  CLUS_2                         141                           140
  CLUS_3                          94                            67

Clustering(12) Variable = Amp Peak 12(8p11.21) mutation analysis
D12V1, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           83                            132
  CLUS_2                           63                            150
  CLUS_3                           49                             80
D12V2, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           80                            153
  CLUS_2                           85                            114
  CLUS_3                           30                             95
D12V3, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           50                            109
  CLUS_2                           51                            113
  CLUS_3                           93                            139
D12V4, multiclass
D12V5, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           36                            130
  CLUS_2                           69                            135
  CLUS_3                           97                            102
D12V6, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           78                             93
  CLUS_2                           56                            120
  CLUS_3                           68                            153
D12V7, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           31                             89
  CLUS_2                           78                            118
  CLUS_3                           30                             52
D12V8, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           21                             36
  CLUS_2                           24                             60
  CLUS_3                           45                             63
  CLUS_4                           49                            100
D12V9, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           32                             68
  CLUS_2                           21                             46
  CLUS_3                           37                             54
D12V10, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           45                             65
  CLUS_2                           33                             77
  CLUS_3                           12                             26
D12V11, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                           41                             80
  CLUS_2                           65                            117
  CLUS_3                           48                             96
D12V12, multiclass
        clus
vv       AMP PEAK 12(8P11.21) MUTATED AMP PEAK 12(8P11.21) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                           94                            187
  CLUS_3                           59                            102

Clustering(13) Variable = Amp Peak 13(8q24.21) mutation analysis
D13V1, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                          142                             73
  CLUS_2                          183                             30
  CLUS_3                          113                             16
D13V2, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                          205                             28
  CLUS_2                          140                             59
  CLUS_3                           93                             32
D13V3, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                          132                             27
  CLUS_2                          129                             35
  CLUS_3                          176                             56
D13V4, multiclass
D13V5, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                          108                             58
  CLUS_2                          197                              7
  CLUS_3                          142                             57
D13V6, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                          122                             49
  CLUS_2                          137                             39
  CLUS_3                          187                             34
D13V7, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           95                             25
  CLUS_2                          154                             42
  CLUS_3                           66                             16
D13V8, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           49                              8
  CLUS_2                           65                             19
  CLUS_3                           84                             24
  CLUS_4                          117                             32
D13V9, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           90                             10
  CLUS_2                           61                              6
  CLUS_3                           56                             35
D13V10, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                           74                             36
  CLUS_2                           97                             13
  CLUS_3                           36                              2
D13V11, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                          101                             20
  CLUS_2                          145                             37
  CLUS_3                          106                             38
D13V12, multiclass
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  CLUS_1                            5                              0
  CLUS_2                          230                             51
  CLUS_3                          117                             44

Clustering(14) Variable = Amp Peak 14(10p15.3) mutation analysis
D14V1, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                           96                            119
  CLUS_2                           89                            124
  CLUS_3                           53                             76
D14V2, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                          103                            130
  CLUS_2                           92                            107
  CLUS_3                           43                             82
D14V3, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                           71                             88
  CLUS_2                           58                            106
  CLUS_3                          108                            124
D14V4, multiclass
D14V5, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                           44                            122
  CLUS_2                           73                            131
  CLUS_3                          124                             75
D14V6, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                           95                             76
  CLUS_2                           60                            116
  CLUS_3                           85                            136
D14V7, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                           48                             72
  CLUS_2                           89                            107
  CLUS_3                           33                             49
D14V8, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                           22                             35
  CLUS_2                           31                             53
  CLUS_3                           52                             56
  CLUS_4                           65                             84
D14V9, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                           42                             58
  CLUS_2                           22                             45
  CLUS_3                           40                             51
D14V10, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                           46                             64
  CLUS_2                           47                             63
  CLUS_3                           11                             27
D14V11, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                           46                             75
  CLUS_2                           82                            100
  CLUS_3                           59                             85
D14V12, multiclass
        clus
vv       AMP PEAK 14(10P15.3) MUTATED AMP PEAK 14(10P15.3) WILD-TYPE
  CLUS_1                            2                              3
  CLUS_2                          119                            162
  CLUS_3                           66                             95

Clustering(15) Variable = Amp Peak 15(10q22.3) mutation analysis
D15V1, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                           67                            148
  CLUS_2                           62                            151
  CLUS_3                           46                             83
D15V2, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                           81                            152
  CLUS_2                           56                            143
  CLUS_3                           38                             87
D15V3, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                           46                            113
  CLUS_2                           56                            108
  CLUS_3                           73                            159
D15V4, multiclass
D15V5, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                           44                            122
  CLUS_2                           64                            140
  CLUS_3                           68                            131
D15V6, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                           51                            120
  CLUS_2                           54                            122
  CLUS_3                           71                            150
D15V7, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                           33                             87
  CLUS_2                           64                            132
  CLUS_3                           22                             60
D15V8, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                           18                             39
  CLUS_2                           25                             59
  CLUS_3                           33                             75
  CLUS_4                           43                            106
D15V9, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                           37                             63
  CLUS_2                           21                             46
  CLUS_3                           20                             71
D15V10, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                           28                             82
  CLUS_2                           38                             72
  CLUS_3                           12                             26
D15V11, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                           34                             87
  CLUS_2                           68                            114
  CLUS_3                           40                            104
D15V12, multiclass
        clus
vv       AMP PEAK 15(10Q22.3) MUTATED AMP PEAK 15(10Q22.3) WILD-TYPE
  CLUS_1                            0                              5
  CLUS_2                           96                            185
  CLUS_3                           46                            115

Clustering(16) Variable = Amp Peak 16(11q14.1) mutation analysis
D16V1, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                           80                            135
  CLUS_2                          111                            102
  CLUS_3                           54                             75
D16V2, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                          115                            118
  CLUS_2                           78                            121
  CLUS_3                           52                             73
D16V3, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                           71                             88
  CLUS_2                           69                             95
  CLUS_3                          104                            128
D16V4, multiclass
D16V5, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                           46                            120
  CLUS_2                          121                             83
  CLUS_3                           84                            115
D16V6, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                           78                             93
  CLUS_2                           62                            114
  CLUS_3                          110                            111
D16V7, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                           51                             69
  CLUS_2                           89                            107
  CLUS_3                           32                             50
D16V8, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                           27                             30
  CLUS_2                           43                             41
  CLUS_3                           40                             68
  CLUS_4                           62                             87
D16V9, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                           59                             41
  CLUS_2                           34                             33
  CLUS_3                           32                             59
D16V10, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                           42                             68
  CLUS_2                           57                             53
  CLUS_3                           26                             12
D16V11, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                           47                             74
  CLUS_2                           89                             93
  CLUS_3                           68                             76
D16V12, multiclass
        clus
vv       AMP PEAK 16(11Q14.1) MUTATED AMP PEAK 16(11Q14.1) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                          127                            154
  CLUS_3                           74                             87

Clustering(17) Variable = Amp Peak 17(12p13.33) mutation analysis
D17V1, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                           134                              81
  CLUS_2                           112                             101
  CLUS_3                            64                              65
D17V2, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                           122                             111
  CLUS_2                           129                              70
  CLUS_3                            59                              66
D17V3, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            81                              78
  CLUS_2                            91                              73
  CLUS_3                           137                              95
D17V4, multiclass
D17V5, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            63                             103
  CLUS_2                           110                              94
  CLUS_3                           145                              54
D17V6, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                           120                              51
  CLUS_2                            95                              81
  CLUS_3                           103                             118
D17V7, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            63                              57
  CLUS_2                           114                              82
  CLUS_3                            40                              42
D17V8, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            29                              28
  CLUS_2                            50                              34
  CLUS_3                            61                              47
  CLUS_4                            77                              72
D17V9, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            49                              51
  CLUS_2                            31                              36
  CLUS_3                            61                              30
D17V10, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            68                              42
  CLUS_2                            55                              55
  CLUS_3                            18                              20
D17V11, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                            70                              51
  CLUS_2                            92                              90
  CLUS_3                            83                              61
D17V12, multiclass
        clus
vv       AMP PEAK 17(12P13.33) MUTATED AMP PEAK 17(12P13.33) WILD-TYPE
  CLUS_1                             3                               2
  CLUS_2                           152                             129
  CLUS_3                            90                              71

Clustering(18) Variable = Amp Peak 18(12p12.1) mutation analysis
D18V1, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                          120                             95
  CLUS_2                          103                            110
  CLUS_3                           70                             59
D18V2, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                          120                            113
  CLUS_2                          119                             80
  CLUS_3                           54                             71
D18V3, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                           84                             75
  CLUS_2                           89                             75
  CLUS_3                          119                            113
D18V4, multiclass
D18V5, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                           58                            108
  CLUS_2                           97                            107
  CLUS_3                          146                             53
D18V6, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                          118                             53
  CLUS_2                           84                             92
  CLUS_3                           99                            122
D18V7, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                           64                             56
  CLUS_2                          101                             95
  CLUS_3                           40                             42
D18V8, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                           25                             32
  CLUS_2                           41                             43
  CLUS_3                           60                             48
  CLUS_4                           79                             70
D18V9, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                           48                             52
  CLUS_2                           29                             38
  CLUS_3                           58                             33
D18V10, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                           64                             46
  CLUS_2                           56                             54
  CLUS_3                           15                             23
D18V11, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                           68                             53
  CLUS_2                           86                             96
  CLUS_3                           80                             64
D18V12, multiclass
        clus
vv       AMP PEAK 18(12P12.1) MUTATED AMP PEAK 18(12P12.1) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                          143                            138
  CLUS_3                           88                             73

Clustering(19) Variable = Amp Peak 19(14q11.2) mutation analysis
D19V1, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                           71                            144
  CLUS_2                           47                            166
  CLUS_3                           24                            105
D19V2, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                           51                            182
  CLUS_2                           62                            137
  CLUS_3                           29                             96
D19V3, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                           45                            114
  CLUS_2                           35                            129
  CLUS_3                           61                            171
D19V4, multiclass
D19V5, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                           31                            135
  CLUS_2                           53                            151
  CLUS_3                           60                            139
D19V6, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                           51                            120
  CLUS_2                           37                            139
  CLUS_3                           56                            165
D19V7, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                           25                             95
  CLUS_2                           48                            148
  CLUS_3                           14                             68
D19V8, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                           10                             47
  CLUS_2                           22                             62
  CLUS_3                           28                             80
  CLUS_4                           27                            122
D19V9, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                           20                             80
  CLUS_2                           20                             47
  CLUS_3                           26                             65
D19V10, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                           32                             78
  CLUS_2                           23                             87
  CLUS_3                           11                             27
D19V11, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                           25                             96
  CLUS_2                           48                            134
  CLUS_3                           43                            101
D19V12, multiclass
        clus
vv       AMP PEAK 19(14Q11.2) MUTATED AMP PEAK 19(14Q11.2) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                           67                            214
  CLUS_3                           48                            113

Clustering(20) Variable = Amp Peak 20(14q32.33) mutation analysis
D20V1, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            51                             164
  CLUS_2                            64                             149
  CLUS_3                            33                              96
D20V2, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            72                             161
  CLUS_2                            45                             154
  CLUS_3                            31                              94
D20V3, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            50                             109
  CLUS_2                            37                             127
  CLUS_3                            61                             171
D20V4, multiclass
D20V5, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            44                             122
  CLUS_2                            72                             132
  CLUS_3                            35                             164
D20V6, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            38                             133
  CLUS_2                            48                             128
  CLUS_3                            64                             157
D20V7, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            30                              90
  CLUS_2                            49                             147
  CLUS_3                            20                              62
D20V8, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            16                              41
  CLUS_2                            24                              60
  CLUS_3                            24                              84
  CLUS_4                            35                             114
D20V9, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            31                              69
  CLUS_2                            23                              44
  CLUS_3                            20                              71
D20V10, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            28                              82
  CLUS_2                            35                              75
  CLUS_3                            11                              27
D20V11, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                            28                              93
  CLUS_2                            53                             129
  CLUS_3                            37                             107
D20V12, multiclass
        clus
vv       AMP PEAK 20(14Q32.33) MUTATED AMP PEAK 20(14Q32.33) WILD-TYPE
  CLUS_1                             1                               4
  CLUS_2                            78                             203
  CLUS_3                            39                             122

Clustering(21) Variable = Amp Peak 21(15q26.3) mutation analysis
D21V1, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           58                            157
  CLUS_2                           70                            143
  CLUS_3                           28                            101
D21V2, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           64                            169
  CLUS_2                           56                            143
  CLUS_3                           36                             89
D21V3, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           50                            109
  CLUS_2                           44                            120
  CLUS_3                           61                            171
D21V4, multiclass
D21V5, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           30                            136
  CLUS_2                           89                            115
  CLUS_3                           38                            161
D21V6, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           44                            127
  CLUS_2                           47                            129
  CLUS_3                           66                            155
D21V7, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           34                             86
  CLUS_2                           57                            139
  CLUS_3                           23                             59
D21V8, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           20                             37
  CLUS_2                           28                             56
  CLUS_3                           31                             77
  CLUS_4                           35                            114
D21V9, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           27                             73
  CLUS_2                           24                             43
  CLUS_3                           20                             71
D21V10, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           29                             81
  CLUS_2                           31                             79
  CLUS_3                           11                             27
D21V11, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                           23                             98
  CLUS_2                           52                            130
  CLUS_3                           41                            103
D21V12, multiclass
        clus
vv       AMP PEAK 21(15Q26.3) MUTATED AMP PEAK 21(15Q26.3) WILD-TYPE
  CLUS_1                            2                              3
  CLUS_2                           68                            213
  CLUS_3                           46                            115

Clustering(22) Variable = Amp Peak 22(17q25.3) mutation analysis
D22V1, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                           76                            139
  CLUS_2                           74                            139
  CLUS_3                           53                             76
D22V2, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                           94                            139
  CLUS_2                           68                            131
  CLUS_3                           41                             84
D22V3, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                           56                            103
  CLUS_2                           61                            103
  CLUS_3                           86                            146
D22V4, multiclass
D22V5, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                           53                            113
  CLUS_2                           92                            112
  CLUS_3                           62                            137
D22V6, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                           63                            108
  CLUS_2                           62                            114
  CLUS_3                           82                            139
D22V7, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                           50                             70
  CLUS_2                           63                            133
  CLUS_3                           36                             46
D22V8, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                           24                             33
  CLUS_2                           22                             62
  CLUS_3                           43                             65
  CLUS_4                           60                             89
D22V9, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                           46                             54
  CLUS_2                           27                             40
  CLUS_3                           24                             67
D22V10, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                           34                             76
  CLUS_2                           52                             58
  CLUS_3                           11                             27
D22V11, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                           50                             71
  CLUS_2                           69                            113
  CLUS_3                           48                             96
D22V12, multiclass
        clus
vv       AMP PEAK 22(17Q25.3) MUTATED AMP PEAK 22(17Q25.3) WILD-TYPE
  CLUS_1                            2                              3
  CLUS_2                          114                            167
  CLUS_3                           51                            110

Clustering(23) Variable = Amp Peak 23(18q11.2) mutation analysis
D23V1, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                           52                            163
  CLUS_2                           54                            159
  CLUS_3                           31                             98
D23V2, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                           57                            176
  CLUS_2                           56                            143
  CLUS_3                           24                            101
D23V3, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                           38                            121
  CLUS_2                           40                            124
  CLUS_3                           58                            174
D23V4, multiclass
D23V5, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                           22                            144
  CLUS_2                           43                            161
  CLUS_3                           74                            125
D23V6, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                           57                            114
  CLUS_2                           29                            147
  CLUS_3                           53                            168
D23V7, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                           28                             92
  CLUS_2                           53                            143
  CLUS_3                           14                             68
D23V8, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                           15                             42
  CLUS_2                           18                             66
  CLUS_3                           31                             77
  CLUS_4                           31                            118
D23V9, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                           32                             68
  CLUS_2                           10                             57
  CLUS_3                           23                             68
D23V10, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                           23                             87
  CLUS_2                           35                             75
  CLUS_3                            7                             31
D23V11, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                           34                             87
  CLUS_2                           45                            137
  CLUS_3                           29                            115
D23V12, multiclass
        clus
vv       AMP PEAK 23(18Q11.2) MUTATED AMP PEAK 23(18Q11.2) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                           71                            210
  CLUS_3                           36                            125

Clustering(24) Variable = Amp Peak 24(19p13.12) mutation analysis
D24V1, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                           134                              81
  CLUS_2                           113                             100
  CLUS_3                            53                              76
D24V2, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                           104                             129
  CLUS_2                           126                              73
  CLUS_3                            70                              55
D24V3, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                            84                              75
  CLUS_2                            77                              87
  CLUS_3                           138                              94
D24V4, multiclass
D24V5, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                            67                              99
  CLUS_2                            89                             115
  CLUS_3                           150                              49
D24V6, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                           116                              55
  CLUS_2                            73                             103
  CLUS_3                           116                             105
D24V7, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                            59                              61
  CLUS_2                           123                              73
  CLUS_3                            32                              50
D24V8, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                            33                              24
  CLUS_2                            49                              35
  CLUS_3                            69                              39
  CLUS_4                            63                              86
D24V9, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                            51                              49
  CLUS_2                            33                              34
  CLUS_3                            56                              35
D24V10, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                            66                              44
  CLUS_2                            54                              56
  CLUS_3                            20                              18
D24V11, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                            61                              60
  CLUS_2                           104                              78
  CLUS_3                            81                              63
D24V12, multiclass
        clus
vv       AMP PEAK 24(19P13.12) MUTATED AMP PEAK 24(19P13.12) WILD-TYPE
  CLUS_1                             4                               1
  CLUS_2                           153                             128
  CLUS_3                            89                              72

Clustering(25) Variable = Amp Peak 25(19q12) mutation analysis
D25V1, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                        124                           91
  CLUS_2                        124                           89
  CLUS_3                         60                           69
D25V2, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                        127                          106
  CLUS_2                        123                           76
  CLUS_3                         58                           67
D25V3, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         91                           68
  CLUS_2                         77                           87
  CLUS_3                        138                           94
D25V4, multiclass
D25V5, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         60                          106
  CLUS_2                         82                          122
  CLUS_3                        172                           27
D25V6, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                        127                           44
  CLUS_2                         68                          108
  CLUS_3                        119                          102
D25V7, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         57                           63
  CLUS_2                        116                           80
  CLUS_3                         40                           42
D25V8, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         29                           28
  CLUS_2                         44                           40
  CLUS_3                         62                           46
  CLUS_4                         78                           71
D25V9, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         58                           42
  CLUS_2                         34                           33
  CLUS_3                         54                           37
D25V10, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         60                           50
  CLUS_2                         64                           46
  CLUS_3                         22                           16
D25V11, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                         62                           59
  CLUS_2                        109                           73
  CLUS_3                         80                           64
D25V12, multiclass
        clus
vv       AMP PEAK 25(19Q12) MUTATED AMP PEAK 25(19Q12) WILD-TYPE
  CLUS_1                          4                            1
  CLUS_2                        156                          125
  CLUS_3                         91                           70

Clustering(26) Variable = Amp Peak 26(19q13.2) mutation analysis
D26V1, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           90                            125
  CLUS_2                           91                            122
  CLUS_3                           53                             76
D26V2, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                          100                            133
  CLUS_2                           93                            106
  CLUS_3                           41                             84
D26V3, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           63                             96
  CLUS_2                           73                             91
  CLUS_3                           96                            136
D26V4, multiclass
D26V5, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           46                            120
  CLUS_2                           69                            135
  CLUS_3                          123                             76
D26V6, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           94                             77
  CLUS_2                           56                            120
  CLUS_3                           88                            133
D26V7, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           47                             73
  CLUS_2                           89                            107
  CLUS_3                           32                             50
D26V8, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           24                             33
  CLUS_2                           32                             52
  CLUS_3                           53                             55
  CLUS_4                           59                             90
D26V9, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           42                             58
  CLUS_2                           23                             44
  CLUS_3                           40                             51
D26V10, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           45                             65
  CLUS_2                           44                             66
  CLUS_3                           16                             22
D26V11, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                           52                             69
  CLUS_2                           78                            104
  CLUS_3                           61                             83
D26V12, multiclass
        clus
vv       AMP PEAK 26(19Q13.2) MUTATED AMP PEAK 26(19Q13.2) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                          114                            167
  CLUS_3                           74                             87

Clustering(27) Variable = Amp Peak 27(20p13) mutation analysis
D27V1, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                        124                           91
  CLUS_2                        114                           99
  CLUS_3                         66                           63
D27V2, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                        123                          110
  CLUS_2                        126                           73
  CLUS_3                         55                           70
D27V3, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                         89                           70
  CLUS_2                         79                           85
  CLUS_3                        135                           97
D27V4, multiclass
D27V5, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                         66                          100
  CLUS_2                         97                          107
  CLUS_3                        147                           52
D27V6, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                        119                           52
  CLUS_2                         82                           94
  CLUS_3                        108                          113
D27V7, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                         61                           59
  CLUS_2                        116                           80
  CLUS_3                         44                           38
D27V8, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                         30                           27
  CLUS_2                         47                           37
  CLUS_3                         60                           48
  CLUS_4                         84                           65
D27V9, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                         52                           48
  CLUS_2                         31                           36
  CLUS_3                         58                           33
D27V10, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                         63                           47
  CLUS_2                         59                           51
  CLUS_3                         19                           19
D27V11, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                         73                           48
  CLUS_2                         98                           84
  CLUS_3                         72                           72
D27V12, multiclass
        clus
vv       AMP PEAK 27(20P13) MUTATED AMP PEAK 27(20P13) WILD-TYPE
  CLUS_1                          3                            2
  CLUS_2                        155                          126
  CLUS_3                         85                           76

Clustering(28) Variable = Amp Peak 28(20q11.21) mutation analysis
D28V1, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                           142                              73
  CLUS_2                           108                             105
  CLUS_3                            74                              55
D28V2, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                           132                             101
  CLUS_2                           143                              56
  CLUS_3                            49                              76
D28V3, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            96                              63
  CLUS_2                            86                              78
  CLUS_3                           142                              90
D28V4, multiclass
D28V5, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            69                              97
  CLUS_2                            91                             113
  CLUS_3                           172                              27
D28V6, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                           139                              32
  CLUS_2                            88                              88
  CLUS_3                           105                             116
D28V7, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            64                              56
  CLUS_2                           123                              73
  CLUS_3                            43                              39
D28V8, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            27                              30
  CLUS_2                            42                              42
  CLUS_3                            72                              36
  CLUS_4                            89                              60
D28V9, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            60                              40
  CLUS_2                            27                              40
  CLUS_3                            67                              24
D28V10, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            68                              42
  CLUS_2                            66                              44
  CLUS_3                            20                              18
D28V11, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                            76                              45
  CLUS_2                           110                              72
  CLUS_3                            81                              63
D28V12, multiclass
        clus
vv       AMP PEAK 28(20Q11.21) MUTATED AMP PEAK 28(20Q11.21) WILD-TYPE
  CLUS_1                             1                               4
  CLUS_2                           168                             113
  CLUS_3                            98                              63

Clustering(29) Variable = Amp Peak 29(20q13.33) mutation analysis
D29V1, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                           164                              51
  CLUS_2                           133                              80
  CLUS_3                            88                              41
D29V2, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                           157                              76
  CLUS_2                           158                              41
  CLUS_3                            70                              55
D29V3, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                           105                              54
  CLUS_2                           116                              48
  CLUS_3                           163                              69
D29V4, multiclass
D29V5, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                            82                              84
  CLUS_2                           131                              73
  CLUS_3                           179                              20
D29V6, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                           146                              25
  CLUS_2                           108                              68
  CLUS_3                           138                              83
D29V7, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                            83                              37
  CLUS_2                           137                              59
  CLUS_3                            55                              27
D29V8, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                            39                              18
  CLUS_2                            53                              31
  CLUS_3                            78                              30
  CLUS_4                           105                              44
D29V9, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                            67                              33
  CLUS_2                            40                              27
  CLUS_3                            74                              17
D29V10, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                            78                              32
  CLUS_2                            78                              32
  CLUS_3                            25                              13
D29V11, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                            89                              32
  CLUS_2                           132                              50
  CLUS_3                            97                              47
D29V12, multiclass
        clus
vv       AMP PEAK 29(20Q13.33) MUTATED AMP PEAK 29(20Q13.33) WILD-TYPE
  CLUS_1                             4                               1
  CLUS_2                           204                              77
  CLUS_3                           110                              51

Clustering(30) Variable = Amp Peak 30(22q12.2) mutation analysis
D30V1, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                           34                            181
  CLUS_2                           37                            176
  CLUS_3                           17                            112
D30V2, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                           39                            194
  CLUS_2                           32                            167
  CLUS_3                           17                            108
D30V3, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                           27                            132
  CLUS_2                           17                            147
  CLUS_3                           42                            190
D30V4, multiclass
D30V5, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                           13                            153
  CLUS_2                           42                            162
  CLUS_3                           33                            166
D30V6, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                           28                            143
  CLUS_2                           14                            162
  CLUS_3                           46                            175
D30V7, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                           20                            100
  CLUS_2                           33                            163
  CLUS_3                           13                             69
D30V8, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                           14                             43
  CLUS_2                            9                             75
  CLUS_3                           23                             85
  CLUS_4                           20                            129
D30V9, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                           19                             81
  CLUS_2                            5                             62
  CLUS_3                           11                             80
D30V10, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                           12                             98
  CLUS_2                           20                             90
  CLUS_3                            3                             35
D30V11, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                           18                            103
  CLUS_2                           36                            146
  CLUS_3                           16                            128
D30V12, multiclass
        clus
vv       AMP PEAK 30(22Q12.2) MUTATED AMP PEAK 30(22Q12.2) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                           54                            227
  CLUS_3                           15                            146

Clustering(31) Variable = Amp Peak 31(Xp11.23) mutation analysis
D31V1, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                           60                            155
  CLUS_2                           66                            147
  CLUS_3                           36                             93
D31V2, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                           71                            162
  CLUS_2                           62                            137
  CLUS_3                           29                             96
D31V3, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                           49                            110
  CLUS_2                           40                            124
  CLUS_3                           72                            160
D31V4, multiclass
D31V5, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                           29                            137
  CLUS_2                           54                            150
  CLUS_3                           80                            119
D31V6, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                           72                             99
  CLUS_2                           37                            139
  CLUS_3                           54                            167
D31V7, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                           31                             89
  CLUS_2                           58                            138
  CLUS_3                           21                             61
D31V8, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                           21                             36
  CLUS_2                           23                             61
  CLUS_3                           32                             76
  CLUS_4                           34                            115
D31V9, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                           33                             67
  CLUS_2                           16                             51
  CLUS_3                           32                             59
D31V10, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                           33                             77
  CLUS_2                           40                             70
  CLUS_3                            8                             30
D31V11, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                           42                             79
  CLUS_2                           52                            130
  CLUS_3                           39                            105
D31V12, multiclass
        clus
vv       AMP PEAK 31(XP11.23) MUTATED AMP PEAK 31(XP11.23) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                           86                            195
  CLUS_3                           46                            115

Clustering(32) Variable = Amp Peak 32(Xq28) mutation analysis
D32V1, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        80                         135
  CLUS_2                        94                         119
  CLUS_3                        47                          82
D32V2, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                       100                         133
  CLUS_2                        73                         126
  CLUS_3                        48                          77
D32V3, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        61                          98
  CLUS_2                        68                          96
  CLUS_3                        91                         141
D32V4, multiclass
D32V5, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        44                         122
  CLUS_2                       100                         104
  CLUS_3                        80                         119
D32V6, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        65                         106
  CLUS_2                        61                         115
  CLUS_3                        98                         123
D32V7, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        53                          67
  CLUS_2                        78                         118
  CLUS_3                        28                          54
D32V8, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        20                          37
  CLUS_2                        32                          52
  CLUS_3                        46                          62
  CLUS_4                        61                          88
D32V9, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        43                          57
  CLUS_2                        26                          41
  CLUS_3                        32                          59
D32V10, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        38                          72
  CLUS_2                        47                          63
  CLUS_3                        16                          22
D32V11, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                        49                          72
  CLUS_2                        72                         110
  CLUS_3                        55                          89
D32V12, multiclass
        clus
vv       AMP PEAK 32(XQ28) MUTATED AMP PEAK 32(XQ28) WILD-TYPE
  CLUS_1                         5                           0
  CLUS_2                       113                         168
  CLUS_3                        58                         103

Clustering(33) Variable = Del Peak  1(1p36.11) mutation analysis
D33V1, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                          103                            112
  CLUS_2                           99                            114
  CLUS_3                           62                             67
D33V2, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                          114                            119
  CLUS_2                           91                            108
  CLUS_3                           59                             66
D33V3, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           73                             86
  CLUS_2                           91                             73
  CLUS_3                           99                            133
D33V4, multiclass
D33V5, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           87                             79
  CLUS_2                          114                             90
  CLUS_3                           64                            135
D33V6, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           69                            102
  CLUS_2                           88                             88
  CLUS_3                          107                            114
D33V7, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           64                             56
  CLUS_2                           84                            112
  CLUS_3                           37                             45
D33V8, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           23                             34
  CLUS_2                           37                             47
  CLUS_3                           48                             60
  CLUS_4                           77                             72
D33V9, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           42                             58
  CLUS_2                           28                             39
  CLUS_3                           40                             51
D33V10, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           45                             65
  CLUS_2                           47                             63
  CLUS_3                           18                             20
D33V11, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           53                             68
  CLUS_2                           75                            107
  CLUS_3                           73                             71
D33V12, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                          119                            162
  CLUS_3                           78                             83

Clustering(34) Variable = Del Peak  2(1q32.3) mutation analysis
D34V1, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                          26                           189
  CLUS_2                          42                           171
  CLUS_3                          23                           106
D34V2, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                          40                           193
  CLUS_2                          28                           171
  CLUS_3                          23                           102
D34V3, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                          28                           131
  CLUS_2                          22                           142
  CLUS_3                          41                           191
D34V4, multiclass
D34V5, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                          16                           150
  CLUS_2                          58                           146
  CLUS_3                          21                           178
D34V6, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                          24                           147
  CLUS_2                          28                           148
  CLUS_3                          43                           178
D34V7, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                          16                           104
  CLUS_2                          32                           164
  CLUS_3                          12                            70
D34V8, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                          15                            42
  CLUS_2                          10                            74
  CLUS_3                          14                            94
  CLUS_4                          21                           128
D34V9, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                          19                            81
  CLUS_2                          11                            56
  CLUS_3                           8                            83
D34V10, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                          15                            95
  CLUS_2                          20                            90
  CLUS_3                           3                            35
D34V11, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                          21                           100
  CLUS_2                          31                           151
  CLUS_3                          22                           122
D34V12, multiclass
        clus
vv       DEL PEAK  2(1Q32.3) MUTATED DEL PEAK  2(1Q32.3) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                          50                           231
  CLUS_3                          24                           137

Clustering(35) Variable = Del Peak  3(2p25.3) mutation analysis
D35V1, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          46                           169
  CLUS_2                          45                           168
  CLUS_3                          26                           103
D35V2, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          49                           184
  CLUS_2                          41                           158
  CLUS_3                          27                            98
D35V3, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          34                           125
  CLUS_2                          29                           135
  CLUS_3                          53                           179
D35V4, multiclass
D35V5, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          30                           136
  CLUS_2                          49                           155
  CLUS_3                          39                           160
D35V6, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          32                           139
  CLUS_2                          35                           141
  CLUS_3                          51                           170
D35V7, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          19                           101
  CLUS_2                          49                           147
  CLUS_3                          16                            66
D35V8, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          17                            40
  CLUS_2                          22                            62
  CLUS_3                          20                            88
  CLUS_4                          25                           124
D35V9, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          20                            80
  CLUS_2                          21                            46
  CLUS_3                          14                            77
D35V10, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          21                            89
  CLUS_2                          26                            84
  CLUS_3                           8                            30
D35V11, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                          27                            94
  CLUS_2                          37                           145
  CLUS_3                          32                           112
D35V12, multiclass
        clus
vv       DEL PEAK  3(2P25.3) MUTATED DEL PEAK  3(2P25.3) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                          60                           221
  CLUS_3                          34                           127

Clustering(36) Variable = Del Peak  4(2q22.1) mutation analysis
D36V1, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          40                           175
  CLUS_2                          54                           159
  CLUS_3                          37                            92
D36V2, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          65                           168
  CLUS_2                          41                           158
  CLUS_3                          25                           100
D36V3, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          40                           119
  CLUS_2                          38                           126
  CLUS_3                          53                           179
D36V4, multiclass
D36V5, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          30                           136
  CLUS_2                          60                           144
  CLUS_3                          44                           155
D36V6, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          32                           139
  CLUS_2                          43                           133
  CLUS_3                          58                           163
D36V7, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          24                            96
  CLUS_2                          54                           142
  CLUS_3                          18                            64
D36V8, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          14                            43
  CLUS_2                          20                            64
  CLUS_3                          30                            78
  CLUS_4                          32                           117
D36V9, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          26                            74
  CLUS_2                          16                            51
  CLUS_3                          23                            68
D36V10, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          29                            81
  CLUS_2                          30                            80
  CLUS_3                           6                            32
D36V11, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                          32                            89
  CLUS_2                          42                           140
  CLUS_3                          30                           114
D36V12, multiclass
        clus
vv       DEL PEAK  4(2Q22.1) MUTATED DEL PEAK  4(2Q22.1) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                          70                           211
  CLUS_3                          33                           128

Clustering(37) Variable = Del Peak  5(2q37.3) mutation analysis
D37V1, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                          51                           164
  CLUS_2                          79                           134
  CLUS_3                          41                            88
D37V2, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                          92                           141
  CLUS_2                          49                           150
  CLUS_3                          30                            95
D37V3, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                          46                           113
  CLUS_2                          48                           116
  CLUS_3                          77                           155
D37V4, multiclass
D37V5, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                          34                           132
  CLUS_2                          85                           119
  CLUS_3                          55                           144
D37V6, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                          44                           127
  CLUS_2                          50                           126
  CLUS_3                          80                           141
D37V7, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                          33                            87
  CLUS_2                          62                           134
  CLUS_3                          26                            56
D37V8, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                          19                            38
  CLUS_2                          23                            61
  CLUS_3                          33                            75
  CLUS_4                          46                           103
D37V9, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                          46                            54
  CLUS_2                          21                            46
  CLUS_3                          25                            66
D37V10, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                          30                            80
  CLUS_2                          49                            61
  CLUS_3                          13                            25
D37V11, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                          42                            79
  CLUS_2                          67                           115
  CLUS_3                          33                           111
D37V12, multiclass
        clus
vv       DEL PEAK  5(2Q37.3) MUTATED DEL PEAK  5(2Q37.3) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                         102                           179
  CLUS_3                          40                           121

Clustering(38) Variable = Del Peak  6(3p26.2) mutation analysis
D38V1, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          90                           125
  CLUS_2                          67                           146
  CLUS_3                          48                            81
D38V2, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          88                           145
  CLUS_2                          90                           109
  CLUS_3                          27                            98
D38V3, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          54                           105
  CLUS_2                          47                           117
  CLUS_3                         103                           129
D38V4, multiclass
D38V5, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          44                           122
  CLUS_2                          70                           134
  CLUS_3                          96                           103
D38V6, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          85                            86
  CLUS_2                          50                           126
  CLUS_3                          74                           147
D38V7, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          40                            80
  CLUS_2                          68                           128
  CLUS_3                          27                            55
D38V8, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          21                            36
  CLUS_2                          19                            65
  CLUS_3                          41                            67
  CLUS_4                          54                            95
D38V9, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          40                            60
  CLUS_2                          15                            52
  CLUS_3                          44                            47
D38V10, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          43                            67
  CLUS_2                          44                            66
  CLUS_3                          12                            26
D38V11, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                          49                            72
  CLUS_2                          69                           113
  CLUS_3                          50                            94
D38V12, multiclass
        clus
vv       DEL PEAK  6(3P26.2) MUTATED DEL PEAK  6(3P26.2) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                         110                           171
  CLUS_3                          57                           104

Clustering(39) Variable = Del Peak  7(4q22.1) mutation analysis
D39V1, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                         157                            58
  CLUS_2                         138                            75
  CLUS_3                          77                            52
D39V2, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                         148                            85
  CLUS_2                         140                            59
  CLUS_3                          84                            41
D39V3, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                         106                            53
  CLUS_2                         108                            56
  CLUS_3                         157                            75
D39V4, multiclass
D39V5, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                         111                            55
  CLUS_2                         127                            77
  CLUS_3                         145                            54
D39V6, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                         121                            50
  CLUS_2                         115                            61
  CLUS_3                         146                            75
D39V7, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          79                            41
  CLUS_2                         139                            57
  CLUS_3                          46                            36
D39V8, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          34                            23
  CLUS_2                          58                            26
  CLUS_3                          84                            24
  CLUS_4                          88                            61
D39V9, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          65                            35
  CLUS_2                          41                            26
  CLUS_3                          69                            22
D39V10, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          79                            31
  CLUS_2                          70                            40
  CLUS_3                          26                            12
D39V11, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                          76                            45
  CLUS_2                         121                            61
  CLUS_3                         105                            39
D39V12, multiclass
        clus
vv       DEL PEAK  7(4Q22.1) MUTATED DEL PEAK  7(4Q22.1) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                         181                           100
  CLUS_3                         120                            41

Clustering(40) Variable = Del Peak  8(4q34.3) mutation analysis
D40V1, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                         166                            49
  CLUS_2                         155                            58
  CLUS_3                          81                            48
D40V2, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                         159                            74
  CLUS_2                         153                            46
  CLUS_3                          90                            35
D40V3, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                         121                            38
  CLUS_2                         105                            59
  CLUS_3                         175                            57
D40V4, multiclass
D40V5, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                         113                            53
  CLUS_2                         154                            50
  CLUS_3                         145                            54
D40V6, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                         128                            43
  CLUS_2                         122                            54
  CLUS_3                         161                            60
D40V7, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                          90                            30
  CLUS_2                         144                            52
  CLUS_3                          55                            27
D40V8, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                          42                            15
  CLUS_2                          67                            17
  CLUS_3                          80                            28
  CLUS_4                         100                            49
D40V9, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                          64                            36
  CLUS_2                          50                            17
  CLUS_3                          71                            20
D40V10, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                          83                            27
  CLUS_2                          70                            40
  CLUS_3                          32                             6
D40V11, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                          81                            40
  CLUS_2                         132                            50
  CLUS_3                         108                            36
D40V12, multiclass
        clus
vv       DEL PEAK  8(4Q34.3) MUTATED DEL PEAK  8(4Q34.3) WILD-TYPE
  CLUS_1                           5                             0
  CLUS_2                         195                            86
  CLUS_3                         121                            40

Clustering(41) Variable = Del Peak  9(5q11.2) mutation analysis
D41V1, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                         128                            87
  CLUS_2                         132                            81
  CLUS_3                          74                            55
D41V2, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                         148                            85
  CLUS_2                         120                            79
  CLUS_3                          66                            59
D41V3, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                         100                            59
  CLUS_2                          92                            72
  CLUS_3                         142                            90
D41V4, multiclass
D41V5, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                          69                            97
  CLUS_2                         143                            61
  CLUS_3                         129                            70
D41V6, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                         113                            58
  CLUS_2                          83                            93
  CLUS_3                         144                            77
D41V7, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                          75                            45
  CLUS_2                         114                            82
  CLUS_3                          50                            32
D41V8, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                          33                            24
  CLUS_2                          48                            36
  CLUS_3                          68                            40
  CLUS_4                          90                            59
D41V9, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                          62                            38
  CLUS_2                          32                            35
  CLUS_3                          54                            37
D41V10, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                          55                            55
  CLUS_2                          69                            41
  CLUS_3                          24                            14
D41V11, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                          78                            43
  CLUS_2                         119                            63
  CLUS_3                          75                            69
D41V12, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                           0                             5
  CLUS_2                         185                            96
  CLUS_3                          87                            74

Clustering(42) Variable = Del Peak 10(5q13.2) mutation analysis
D42V1, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                         150                            65
  CLUS_2                         156                            57
  CLUS_3                          91                            38
D42V2, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                         170                            63
  CLUS_2                         140                            59
  CLUS_3                          87                            38
D42V3, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                         116                            43
  CLUS_2                         117                            47
  CLUS_3                         164                            68
D42V4, multiclass
D42V5, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                          87                            79
  CLUS_2                         177                            27
  CLUS_3                         142                            57
D42V6, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                         126                            45
  CLUS_2                         113                            63
  CLUS_3                         166                            55
D42V7, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                          82                            38
  CLUS_2                         138                            58
  CLUS_3                          60                            22
D42V8, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                          42                            15
  CLUS_2                          59                            25
  CLUS_3                          78                            30
  CLUS_4                         101                            48
D42V9, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                          76                            24
  CLUS_2                          45                            22
  CLUS_3                          62                            29
D42V10, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                          66                            44
  CLUS_2                          85                            25
  CLUS_3                          32                             6
D42V11, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                          93                            28
  CLUS_2                         134                            48
  CLUS_3                          95                            49
D42V12, multiclass
        clus
vv       DEL PEAK 10(5Q13.2) MUTATED DEL PEAK 10(5Q13.2) WILD-TYPE
  CLUS_1                           1                             4
  CLUS_2                         212                            69
  CLUS_3                         109                            52

Clustering(43) Variable = Del Peak 11(6q27) mutation analysis
D43V1, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                       133                          82
  CLUS_2                       145                          68
  CLUS_3                        93                          36
D43V2, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                       164                          69
  CLUS_2                       114                          85
  CLUS_3                        93                          32
D43V3, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                       110                          49
  CLUS_2                       114                          50
  CLUS_3                       147                          85
D43V4, multiclass
D43V5, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                       122                          44
  CLUS_2                       159                          45
  CLUS_3                       100                          99
D43V6, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                        91                          80
  CLUS_2                       134                          42
  CLUS_3                       155                          66
D43V7, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                        78                          42
  CLUS_2                       125                          71
  CLUS_3                        59                          23
D43V8, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                        39                          18
  CLUS_2                        54                          30
  CLUS_3                        73                          35
  CLUS_4                        96                          53
D43V9, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                        68                          32
  CLUS_2                        51                          16
  CLUS_3                        39                          52
D43V10, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                        61                          49
  CLUS_2                        71                          39
  CLUS_3                        26                          12
D43V11, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                        74                          47
  CLUS_2                       124                          58
  CLUS_3                        95                          49
D43V12, multiclass
        clus
vv       DEL PEAK 11(6Q27) MUTATED DEL PEAK 11(6Q27) WILD-TYPE
  CLUS_1                         3                           2
  CLUS_2                       183                          98
  CLUS_3                       107                          54

Clustering(44) Variable = Del Peak 12(7p22.1) mutation analysis
D44V1, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                          88                           127
  CLUS_2                          98                           115
  CLUS_3                          56                            73
D44V2, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                         110                           123
  CLUS_2                          91                           108
  CLUS_3                          41                            84
D44V3, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                          74                            85
  CLUS_2                          70                            94
  CLUS_3                          98                           134
D44V4, multiclass
D44V5, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                          47                           119
  CLUS_2                         131                            73
  CLUS_3                          69                           130
D44V6, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                          71                           100
  CLUS_2                          79                            97
  CLUS_3                          96                           125
D44V7, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                          51                            69
  CLUS_2                          89                           107
  CLUS_3                          34                            48
D44V8, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                          27                            30
  CLUS_2                          37                            47
  CLUS_3                          43                            65
  CLUS_4                          67                            82
D44V9, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                          54                            46
  CLUS_2                          31                            36
  CLUS_3                          39                            52
D44V10, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                          48                            62
  CLUS_2                          61                            49
  CLUS_3                          15                            23
D44V11, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                          62                            59
  CLUS_2                          79                           103
  CLUS_3                          62                            82
D44V12, multiclass
        clus
vv       DEL PEAK 12(7P22.1) MUTATED DEL PEAK 12(7P22.1) WILD-TYPE
  CLUS_1                           2                             3
  CLUS_2                         133                           148
  CLUS_3                          68                            93

Clustering(45) Variable = Del Peak 13(8p23.3) mutation analysis
D45V1, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                         132                            83
  CLUS_2                         154                            59
  CLUS_3                          87                            42
D45V2, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                         171                            62
  CLUS_2                         130                            69
  CLUS_3                          72                            53
D45V3, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                         110                            49
  CLUS_2                         113                            51
  CLUS_3                         151                            81
D45V4, multiclass
D45V5, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                          75                            91
  CLUS_2                         161                            43
  CLUS_3                         145                            54
D45V6, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                         114                            57
  CLUS_2                         106                            70
  CLUS_3                         160                            61
D45V7, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                          81                            39
  CLUS_2                         135                            61
  CLUS_3                          54                            28
D45V8, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                          40                            17
  CLUS_2                          55                            29
  CLUS_3                          78                            30
  CLUS_4                          97                            52
D45V9, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                          73                            27
  CLUS_2                          47                            20
  CLUS_3                          64                            27
D45V10, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                          75                            35
  CLUS_2                          80                            30
  CLUS_3                          29                             9
D45V11, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                          89                            32
  CLUS_2                         122                            60
  CLUS_3                          92                            52
D45V12, multiclass
        clus
vv       DEL PEAK 13(8P23.3) MUTATED DEL PEAK 13(8P23.3) WILD-TYPE
  CLUS_1                           5                             0
  CLUS_2                         195                            86
  CLUS_3                         103                            58

Clustering(46) Variable = Del Peak 14(8p21.2) mutation analysis
D46V1, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                         137                            78
  CLUS_2                         158                            55
  CLUS_3                          95                            34
D46V2, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                         177                            56
  CLUS_2                         136                            63
  CLUS_3                          77                            48
D46V3, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                         119                            40
  CLUS_2                         116                            48
  CLUS_3                         155                            77
D46V4, multiclass
D46V5, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                          86                            80
  CLUS_2                         163                            41
  CLUS_3                         149                            50
D46V6, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                         117                            54
  CLUS_2                         118                            58
  CLUS_3                         163                            58
D46V7, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                          83                            37
  CLUS_2                         142                            54
  CLUS_3                          57                            25
D46V8, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                          42                            15
  CLUS_2                          58                            26
  CLUS_3                          79                            29
  CLUS_4                         103                            46
D46V9, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                          79                            21
  CLUS_2                          52                            15
  CLUS_3                          64                            27
D46V10, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                          78                            32
  CLUS_2                          85                            25
  CLUS_3                          32                             6
D46V11, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                          90                            31
  CLUS_2                         126                            56
  CLUS_3                          99                            45
D46V12, multiclass
        clus
vv       DEL PEAK 14(8P21.2) MUTATED DEL PEAK 14(8P21.2) WILD-TYPE
  CLUS_1                           5                             0
  CLUS_2                         197                            84
  CLUS_3                         113                            48

Clustering(47) Variable = Del Peak 15(9p24.3) mutation analysis
D47V1, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                         110                           105
  CLUS_2                          70                           143
  CLUS_3                          66                            63
D47V2, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                          98                           135
  CLUS_2                         100                            99
  CLUS_3                          48                            77
D47V3, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                          68                            91
  CLUS_2                          76                            88
  CLUS_3                         100                           132
D47V4, multiclass
D47V5, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                          72                            94
  CLUS_2                          79                           125
  CLUS_3                         104                            95
D47V6, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                          91                            80
  CLUS_2                          88                            88
  CLUS_3                          76                           145
D47V7, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                          54                            66
  CLUS_2                          76                           120
  CLUS_3                          37                            45
D47V8, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                          22                            35
  CLUS_2                          34                            50
  CLUS_3                          42                            66
  CLUS_4                          69                            80
D47V9, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                          39                            61
  CLUS_2                          26                            41
  CLUS_3                          49                            42
D47V10, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                          51                            59
  CLUS_2                          41                            69
  CLUS_3                          22                            16
D47V11, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                          52                            69
  CLUS_2                          70                           112
  CLUS_3                          73                            71
D47V12, multiclass
        clus
vv       DEL PEAK 15(9P24.3) MUTATED DEL PEAK 15(9P24.3) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                         113                           168
  CLUS_3                          79                            82

Clustering(48) Variable = Del Peak 16(9q34.13) mutation analysis
D48V1, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                          141                             74
  CLUS_2                          123                             90
  CLUS_3                           65                             64
D48V2, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                          121                            112
  CLUS_2                          129                             70
  CLUS_3                           79                             46
D48V3, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                           94                             65
  CLUS_2                           97                             67
  CLUS_3                          137                             95
D48V4, multiclass
D48V5, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                           87                             79
  CLUS_2                          102                            102
  CLUS_3                          148                             51
D48V6, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                          113                             58
  CLUS_2                           92                             84
  CLUS_3                          132                             89
D48V7, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                           66                             54
  CLUS_2                          118                             78
  CLUS_3                           42                             40
D48V8, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                           27                             30
  CLUS_2                           51                             33
  CLUS_3                           65                             43
  CLUS_4                           83                             66
D48V9, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                           58                             42
  CLUS_2                           36                             31
  CLUS_3                           60                             31
D48V10, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                           66                             44
  CLUS_2                           65                             45
  CLUS_3                           23                             15
D48V11, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                           64                             57
  CLUS_2                          107                             75
  CLUS_3                           98                             46
D48V12, multiclass
        clus
vv       DEL PEAK 16(9Q34.13) MUTATED DEL PEAK 16(9Q34.13) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                          159                            122
  CLUS_3                          106                             55

Clustering(49) Variable = Del Peak 17(10p15.3) mutation analysis
D49V1, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                           55                            160
  CLUS_2                           39                            174
  CLUS_3                           24                            105
D49V2, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                           38                            195
  CLUS_2                           52                            147
  CLUS_3                           28                             97
D49V3, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                           28                            131
  CLUS_2                           44                            120
  CLUS_3                           45                            187
D49V4, multiclass
D49V5, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                           38                            128
  CLUS_2                           51                            153
  CLUS_3                           32                            167
D49V6, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                           36                            135
  CLUS_2                           43                            133
  CLUS_3                           42                            179
D49V7, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                           21                             99
  CLUS_2                           42                            154
  CLUS_3                           22                             60
D49V8, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                           18                             39
  CLUS_2                           21                             63
  CLUS_3                           16                             92
  CLUS_4                           30                            119
D49V9, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                           12                             88
  CLUS_2                           20                             47
  CLUS_3                           20                             71
D49V10, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                           29                             81
  CLUS_2                           15                             95
  CLUS_3                            8                             30
D49V11, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                           21                            100
  CLUS_2                           32                            150
  CLUS_3                           35                            109
D49V12, multiclass
        clus
vv       DEL PEAK 17(10P15.3) MUTATED DEL PEAK 17(10P15.3) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                           50                            231
  CLUS_3                           37                            124

Clustering(50) Variable = Del Peak 18(10q23.31) mutation analysis
D50V1, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                            83                             132
  CLUS_2                            89                             124
  CLUS_3                            42                              87
D50V2, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                            89                             144
  CLUS_2                            76                             123
  CLUS_3                            49                              76
D50V3, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                            57                             102
  CLUS_2                            47                             117
  CLUS_3                           110                             122
D50V4, multiclass
D50V5, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                            43                             123
  CLUS_2                            91                             113
  CLUS_3                            86                             113
D50V6, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                            71                             100
  CLUS_2                            49                             127
  CLUS_3                           100                             121
D50V7, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                            35                              85
  CLUS_2                            84                             112
  CLUS_3                            35                              47
D50V8, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                            31                              26
  CLUS_2                            38                              46
  CLUS_3                            34                              74
  CLUS_4                            51                              98
D50V9, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                            42                              58
  CLUS_2                            28                              39
  CLUS_3                            40                              51
D50V10, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                            50                              60
  CLUS_2                            47                              63
  CLUS_3                            13                              25
D50V11, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                            43                              78
  CLUS_2                            85                              97
  CLUS_3                            52                              92
D50V12, multiclass
        clus
vv       DEL PEAK 18(10Q23.31) MUTATED DEL PEAK 18(10Q23.31) WILD-TYPE
  CLUS_1                             1                               4
  CLUS_2                           119                             162
  CLUS_3                            60                             101

Clustering(51) Variable = Del Peak 19(10q26.3) mutation analysis
D51V1, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                           61                            154
  CLUS_2                           88                            125
  CLUS_3                           37                             92
D51V2, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                           88                            145
  CLUS_2                           54                            145
  CLUS_3                           44                             81
D51V3, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                           59                            100
  CLUS_2                           47                            117
  CLUS_3                           80                            152
D51V4, multiclass
D51V5, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                           32                            134
  CLUS_2                           85                            119
  CLUS_3                           72                            127
D51V6, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                           58                            113
  CLUS_2                           48                            128
  CLUS_3                           83                            138
D51V7, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                           31                             89
  CLUS_2                           73                            123
  CLUS_3                           30                             52
D51V8, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                           28                             29
  CLUS_2                           33                             51
  CLUS_3                           33                             75
  CLUS_4                           40                            109
D51V9, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                           43                             57
  CLUS_2                           20                             47
  CLUS_3                           25                             66
D51V10, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                           30                             80
  CLUS_2                           44                             66
  CLUS_3                           14                             24
D51V11, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                           35                             86
  CLUS_2                           77                            105
  CLUS_3                           42                            102
D51V12, multiclass
        clus
vv       DEL PEAK 19(10Q26.3) MUTATED DEL PEAK 19(10Q26.3) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                          105                            176
  CLUS_3                           48                            113

Clustering(52) Variable = Del Peak 20(11p15.5) mutation analysis
D52V1, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                          121                             94
  CLUS_2                          141                             72
  CLUS_3                           71                             58
D52V2, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                          148                             85
  CLUS_2                          114                             85
  CLUS_3                           71                             54
D52V3, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                           96                             63
  CLUS_2                          102                             62
  CLUS_3                          135                             97
D52V4, multiclass
D52V5, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                           75                             91
  CLUS_2                          160                             44
  CLUS_3                          103                             96
D52V6, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                           90                             81
  CLUS_2                           99                             77
  CLUS_3                          148                             73
D52V7, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                           71                             49
  CLUS_2                          113                             83
  CLUS_3                           47                             35
D52V8, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                           37                             20
  CLUS_2                           45                             39
  CLUS_3                           64                             44
  CLUS_4                           85                             64
D52V9, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                           60                             40
  CLUS_2                           36                             31
  CLUS_3                           52                             39
D52V10, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                           60                             50
  CLUS_2                           69                             41
  CLUS_3                           19                             19
D52V11, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                           66                             55
  CLUS_2                          117                             65
  CLUS_3                           79                             65
D52V12, multiclass
        clus
vv       DEL PEAK 20(11P15.5) MUTATED DEL PEAK 20(11P15.5) WILD-TYPE
  CLUS_1                            5                              0
  CLUS_2                          173                            108
  CLUS_3                           84                             77

Clustering(53) Variable = Del Peak 21(11q25) mutation analysis
D53V1, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                         77                          138
  CLUS_2                         70                          143
  CLUS_3                         45                           84
D53V2, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                         86                          147
  CLUS_2                         71                          128
  CLUS_3                         35                           90
D53V3, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                         64                           95
  CLUS_2                         52                          112
  CLUS_3                         74                          158
D53V4, multiclass
D53V5, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                         51                          115
  CLUS_2                         64                          140
  CLUS_3                         80                          119
D53V6, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                         63                          108
  CLUS_2                         54                          122
  CLUS_3                         77                          144
D53V7, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                         39                           81
  CLUS_2                         71                          125
  CLUS_3                         22                           60
D53V8, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                         22                           35
  CLUS_2                         20                           64
  CLUS_3                         40                           68
  CLUS_4                         50                           99
D53V9, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                         36                           64
  CLUS_2                         22                           45
  CLUS_3                         32                           59
D53V10, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                         38                           72
  CLUS_2                         40                           70
  CLUS_3                         12                           26
D53V11, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                         46                           75
  CLUS_2                         63                          119
  CLUS_3                         46                           98
D53V12, multiclass
        clus
vv       DEL PEAK 21(11Q25) MUTATED DEL PEAK 21(11Q25) WILD-TYPE
  CLUS_1                          1                            4
  CLUS_2                        107                          174
  CLUS_3                         47                          114

Clustering(54) Variable = Del Peak 22(12q24.33) mutation analysis
D54V1, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            63                             152
  CLUS_2                            97                             116
  CLUS_3                            52                              77
D54V2, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                           101                             132
  CLUS_2                            49                             150
  CLUS_3                            62                              63
D54V3, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            67                              92
  CLUS_2                            66                              98
  CLUS_3                            79                             153
D54V4, multiclass
D54V5, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            55                             111
  CLUS_2                           113                              91
  CLUS_3                            49                             150
D54V6, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            52                             119
  CLUS_2                            73                             103
  CLUS_3                            92                             129
D54V7, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            47                              73
  CLUS_2                            69                             127
  CLUS_3                            36                              46
D54V8, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            27                              30
  CLUS_2                            31                              53
  CLUS_3                            40                              68
  CLUS_4                            54                              95
D54V9, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            42                              58
  CLUS_2                            25                              42
  CLUS_3                            24                              67
D54V10, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            26                              84
  CLUS_2                            48                              62
  CLUS_3                            17                              21
D54V11, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                            43                              78
  CLUS_2                            82                             100
  CLUS_3                            43                             101
D54V12, multiclass
        clus
vv       DEL PEAK 22(12Q24.33) MUTATED DEL PEAK 22(12Q24.33) WILD-TYPE
  CLUS_1                             3                               2
  CLUS_2                           119                             162
  CLUS_3                            46                             115

Clustering(55) Variable = Del Peak 23(13q14.2) mutation analysis
D55V1, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                          133                             82
  CLUS_2                          145                             68
  CLUS_3                           69                             60
D55V2, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                          140                             93
  CLUS_2                          130                             69
  CLUS_3                           77                             48
D55V3, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                          103                             56
  CLUS_2                          103                             61
  CLUS_3                          141                             91
D55V4, multiclass
D55V5, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           83                             83
  CLUS_2                          154                             50
  CLUS_3                          118                             81
D55V6, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                          109                             62
  CLUS_2                           86                             90
  CLUS_3                          160                             61
D55V7, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           63                             57
  CLUS_2                          139                             57
  CLUS_3                           45                             37
D55V8, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           33                             24
  CLUS_2                           63                             21
  CLUS_3                           75                             33
  CLUS_4                           76                             73
D55V9, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           57                             43
  CLUS_2                           47                             20
  CLUS_3                           64                             27
D55V10, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           77                             33
  CLUS_2                           70                             40
  CLUS_3                           21                             17
D55V11, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                           69                             52
  CLUS_2                          117                             65
  CLUS_3                           93                             51
D55V12, multiclass
        clus
vv       DEL PEAK 23(13Q14.2) MUTATED DEL PEAK 23(13Q14.2) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                          173                            108
  CLUS_3                          103                             58

Clustering(56) Variable = Del Peak 24(14q23.3) mutation analysis
D56V1, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                          111                            104
  CLUS_2                          123                             90
  CLUS_3                           58                             71
D56V2, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                          122                            111
  CLUS_2                          100                             99
  CLUS_3                           70                             55
D56V3, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                           87                             72
  CLUS_2                           85                             79
  CLUS_3                          120                            112
D56V4, multiclass
D56V5, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                           69                             97
  CLUS_2                          103                            101
  CLUS_3                          126                             73
D56V6, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                           91                             80
  CLUS_2                           85                             91
  CLUS_3                          122                             99
D56V7, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                           56                             64
  CLUS_2                          111                             85
  CLUS_3                           40                             42
D56V8, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                           32                             25
  CLUS_2                           45                             39
  CLUS_3                           62                             46
  CLUS_4                           68                             81
D56V9, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                           52                             48
  CLUS_2                           35                             32
  CLUS_3                           44                             47
D56V10, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                           51                             59
  CLUS_2                           63                             47
  CLUS_3                           17                             21
D56V11, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                           65                             56
  CLUS_2                           97                             85
  CLUS_3                           72                             72
D56V12, multiclass
        clus
vv       DEL PEAK 24(14Q23.3) MUTATED DEL PEAK 24(14Q23.3) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                          151                            130
  CLUS_3                           80                             81

Clustering(57) Variable = Del Peak 25(15q15.1) mutation analysis
D57V1, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                          148                             67
  CLUS_2                          122                             91
  CLUS_3                           79                             50
D57V2, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                          143                             90
  CLUS_2                          143                             56
  CLUS_3                           63                             62
D57V3, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           94                             65
  CLUS_2                           92                             72
  CLUS_3                          162                             70
D57V4, multiclass
D57V5, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           79                             87
  CLUS_2                          117                             87
  CLUS_3                          161                             38
D57V6, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                          130                             41
  CLUS_2                           97                             79
  CLUS_3                          130                             91
D57V7, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           67                             53
  CLUS_2                          132                             64
  CLUS_3                           51                             31
D57V8, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           43                             14
  CLUS_2                           50                             34
  CLUS_3                           73                             35
  CLUS_4                           84                             65
D57V9, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           61                             39
  CLUS_2                           39                             28
  CLUS_3                           70                             21
D57V10, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           75                             35
  CLUS_2                           70                             40
  CLUS_3                           25                             13
D57V11, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                           77                             44
  CLUS_2                          124                             58
  CLUS_3                           89                             55
D57V12, multiclass
        clus
vv       DEL PEAK 25(15Q15.1) MUTATED DEL PEAK 25(15Q15.1) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                          186                             95
  CLUS_3                          101                             60

Clustering(58) Variable = Del Peak 26(16p13.3) mutation analysis
D58V1, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                          108                            107
  CLUS_2                          118                             95
  CLUS_3                           70                             59
D58V2, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                          133                            100
  CLUS_2                           93                            106
  CLUS_3                           70                             55
D58V3, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           89                             70
  CLUS_2                           77                             87
  CLUS_3                          129                            103
D58V4, multiclass
D58V5, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           80                             86
  CLUS_2                          104                            100
  CLUS_3                          119                             80
D58V6, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           95                             76
  CLUS_2                           96                             80
  CLUS_3                          112                            109
D58V7, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           65                             55
  CLUS_2                          103                             93
  CLUS_3                           42                             40
D58V8, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           33                             24
  CLUS_2                           47                             37
  CLUS_3                           48                             60
  CLUS_4                           82                             67
D58V9, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           57                             43
  CLUS_2                           32                             35
  CLUS_3                           49                             42
D58V10, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           56                             54
  CLUS_2                           61                             49
  CLUS_3                           21                             17
D58V11, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                           59                             62
  CLUS_2                          106                             76
  CLUS_3                           73                             71
D58V12, multiclass
        clus
vv       DEL PEAK 26(16P13.3) MUTATED DEL PEAK 26(16P13.3) WILD-TYPE
  CLUS_1                            3                              2
  CLUS_2                          152                            129
  CLUS_3                           83                             78

Clustering(59) Variable = Del Peak 27(16q22.1) mutation analysis
D59V1, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                          163                             52
  CLUS_2                          173                             40
  CLUS_3                          104                             25
D59V2, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                          191                             42
  CLUS_2                          154                             45
  CLUS_3                           95                             30
D59V3, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                          125                             34
  CLUS_2                          120                             44
  CLUS_3                          195                             37
D59V4, multiclass
D59V5, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                          114                             52
  CLUS_2                          167                             37
  CLUS_3                          170                             29
D59V6, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                          141                             30
  CLUS_2                          139                             37
  CLUS_3                          170                             51
D59V7, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                           90                             30
  CLUS_2                          157                             39
  CLUS_3                           63                             19
D59V8, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                           48                              9
  CLUS_2                           61                             23
  CLUS_3                           87                             21
  CLUS_4                          114                             35
D59V9, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                           82                             18
  CLUS_2                           49                             18
  CLUS_3                           75                             16
D59V10, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                           88                             22
  CLUS_2                           91                             19
  CLUS_3                           27                             11
D59V11, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                          101                             20
  CLUS_2                          148                             34
  CLUS_3                          111                             33
D59V12, multiclass
        clus
vv       DEL PEAK 27(16Q22.1) MUTATED DEL PEAK 27(16Q22.1) WILD-TYPE
  CLUS_1                            5                              0
  CLUS_2                          233                             48
  CLUS_3                          122                             39

Clustering(60) Variable = Del Peak 28(16q23.1) mutation analysis
D60V1, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                          159                             56
  CLUS_2                          165                             48
  CLUS_3                          108                             21
D60V2, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                          189                             44
  CLUS_2                          154                             45
  CLUS_3                           89                             36
D60V3, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                          128                             31
  CLUS_2                          119                             45
  CLUS_3                          186                             46
D60V4, multiclass
D60V5, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                          109                             57
  CLUS_2                          164                             40
  CLUS_3                          169                             30
D60V6, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                          139                             32
  CLUS_2                          135                             41
  CLUS_3                          167                             54
D60V7, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                           88                             32
  CLUS_2                          153                             43
  CLUS_3                           64                             18
D60V8, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                           44                             13
  CLUS_2                           62                             22
  CLUS_3                           84                             24
  CLUS_4                          115                             34
D60V9, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                           79                             21
  CLUS_2                           49                             18
  CLUS_3                           75                             16
D60V10, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                           87                             23
  CLUS_2                           89                             21
  CLUS_3                           27                             11
D60V11, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                          102                             19
  CLUS_2                          147                             35
  CLUS_3                          106                             38
D60V12, multiclass
        clus
vv       DEL PEAK 28(16Q23.1) MUTATED DEL PEAK 28(16Q23.1) WILD-TYPE
  CLUS_1                            5                              0
  CLUS_2                          232                             49
  CLUS_3                          118                             43

Clustering(61) Variable = Del Peak 29(17p12) mutation analysis
D61V1, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                        175                           40
  CLUS_2                        184                           29
  CLUS_3                        111                           18
D61V2, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                        197                           36
  CLUS_2                        165                           34
  CLUS_3                        108                           17
D61V3, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                        138                           21
  CLUS_2                        136                           28
  CLUS_3                        196                           36
D61V4, multiclass
D61V5, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                        140                           26
  CLUS_2                        174                           30
  CLUS_3                        167                           32
D61V6, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                        139                           32
  CLUS_2                        151                           25
  CLUS_3                        190                           31
D61V7, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                        100                           20
  CLUS_2                        161                           35
  CLUS_3                         69                           13
D61V8, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                         51                            6
  CLUS_2                         70                           14
  CLUS_3                         91                           17
  CLUS_4                        118                           31
D61V9, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                         88                           12
  CLUS_2                         60                            7
  CLUS_3                         73                           18
D61V10, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                         91                           19
  CLUS_2                         97                           13
  CLUS_3                         33                            5
D61V11, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                        105                           16
  CLUS_2                        160                           22
  CLUS_3                        121                           23
D61V12, multiclass
        clus
vv       DEL PEAK 29(17P12) MUTATED DEL PEAK 29(17P12) WILD-TYPE
  CLUS_1                          5                            0
  CLUS_2                        245                           36
  CLUS_3                        136                           25

Clustering(62) Variable = Del Peak 30(17q11.2) mutation analysis
D62V1, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                          174                             41
  CLUS_2                          175                             38
  CLUS_3                          106                             23
D62V2, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                          197                             36
  CLUS_2                          152                             47
  CLUS_3                          106                             19
D62V3, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                          127                             32
  CLUS_2                          136                             28
  CLUS_3                          192                             40
D62V4, multiclass
D62V5, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                          132                             34
  CLUS_2                          183                             21
  CLUS_3                          151                             48
D62V6, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                          125                             46
  CLUS_2                          146                             30
  CLUS_3                          194                             27
D62V7, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                           98                             22
  CLUS_2                          160                             36
  CLUS_3                           64                             18
D62V8, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                           50                              7
  CLUS_2                           74                             10
  CLUS_3                           82                             26
  CLUS_4                          116                             33
D62V9, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                           86                             14
  CLUS_2                           52                             15
  CLUS_3                           74                             17
D62V10, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                           87                             23
  CLUS_2                           93                             17
  CLUS_3                           32                              6
D62V11, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                           98                             23
  CLUS_2                          159                             23
  CLUS_3                          117                             27
D62V12, multiclass
        clus
vv       DEL PEAK 30(17Q11.2) MUTATED DEL PEAK 30(17Q11.2) WILD-TYPE
  CLUS_1                            4                              1
  CLUS_2                          238                             43
  CLUS_3                          132                             29

Clustering(63) Variable = Del Peak 31(18q23) mutation analysis
D63V1, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                        140                           75
  CLUS_2                        141                           72
  CLUS_3                         83                           46
D63V2, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                        154                           79
  CLUS_2                        131                           68
  CLUS_3                         79                           46
D63V3, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                        113                           46
  CLUS_2                        101                           63
  CLUS_3                        150                           82
D63V4, multiclass
D63V5, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                        101                           65
  CLUS_2                        151                           53
  CLUS_3                        121                           78
D63V6, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                        108                           63
  CLUS_2                        122                           54
  CLUS_3                        143                           78
D63V7, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                         69                           51
  CLUS_2                        131                           65
  CLUS_3                         54                           28
D63V8, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                         36                           21
  CLUS_2                         52                           32
  CLUS_3                         77                           31
  CLUS_4                         89                           60
D63V9, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                         65                           35
  CLUS_2                         40                           27
  CLUS_3                         66                           25
D63V10, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                         77                           33
  CLUS_2                         72                           38
  CLUS_3                         22                           16
D63V11, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                         83                           38
  CLUS_2                        123                           59
  CLUS_3                         92                           52
D63V12, multiclass
        clus
vv       DEL PEAK 31(18Q23) MUTATED DEL PEAK 31(18Q23) WILD-TYPE
  CLUS_1                          4                            1
  CLUS_2                        190                           91
  CLUS_3                        104                           57

Clustering(64) Variable = Del Peak 32(19p13.3) mutation analysis
D64V1, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                          195                             20
  CLUS_2                          182                             31
  CLUS_3                          114                             15
D64V2, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                          199                             34
  CLUS_2                          187                             12
  CLUS_3                          105                             20
D64V3, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                          140                             19
  CLUS_2                          144                             20
  CLUS_3                          206                             26
D64V4, multiclass
D64V5, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                          138                             28
  CLUS_2                          176                             28
  CLUS_3                          188                             11
D64V6, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                          160                             11
  CLUS_2                          154                             22
  CLUS_3                          187                             34
D64V7, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                          104                             16
  CLUS_2                          175                             21
  CLUS_3                           70                             12
D64V8, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                           51                              6
  CLUS_2                           72                             12
  CLUS_3                          100                              8
  CLUS_4                          126                             23
D64V9, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                           86                             14
  CLUS_2                           58                              9
  CLUS_3                           84                              7
D64V10, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                          103                              7
  CLUS_2                           96                             14
  CLUS_3                           29                              9
D64V11, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                          107                             14
  CLUS_2                          162                             20
  CLUS_3                          133                             11
D64V12, multiclass
        clus
vv       DEL PEAK 32(19P13.3) MUTATED DEL PEAK 32(19P13.3) WILD-TYPE
  CLUS_1                            5                              0
  CLUS_2                          251                             30
  CLUS_3                          146                             15

Clustering(65) Variable = Del Peak 33(19q13.33) mutation analysis
D65V1, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                           127                              88
  CLUS_2                           114                              99
  CLUS_3                            49                              80
D65V2, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                           104                             129
  CLUS_2                           117                              82
  CLUS_3                            69                              56
D65V3, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            79                              80
  CLUS_2                            76                              88
  CLUS_3                           134                              98
D65V4, multiclass
D65V5, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            82                              84
  CLUS_2                            95                             109
  CLUS_3                           118                              81
D65V6, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                           102                              69
  CLUS_2                            73                             103
  CLUS_3                           119                             102
D65V7, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            47                              73
  CLUS_2                           103                              93
  CLUS_3                            45                              37
D65V8, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            31                              26
  CLUS_2                            43                              41
  CLUS_3                            58                              50
  CLUS_4                            63                              86
D65V9, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            37                              63
  CLUS_2                            34                              33
  CLUS_3                            54                              37
D65V10, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            62                              48
  CLUS_2                            48                              62
  CLUS_3                            15                              23
D65V11, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                            55                              66
  CLUS_2                            94                              88
  CLUS_3                            80                              64
D65V12, multiclass
        clus
vv       DEL PEAK 33(19Q13.33) MUTATED DEL PEAK 33(19Q13.33) WILD-TYPE
  CLUS_1                             1                               4
  CLUS_2                           138                             143
  CLUS_3                            90                              71

Clustering(66) Variable = Del Peak 34(19q13.43) mutation analysis
D66V1, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                           122                              93
  CLUS_2                           101                             112
  CLUS_3                            53                              76
D66V2, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                           104                             129
  CLUS_2                           112                              87
  CLUS_3                            60                              65
D66V3, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                            71                              88
  CLUS_2                            76                              88
  CLUS_3                           128                             104
D66V4, multiclass
D66V5, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                            79                              87
  CLUS_2                            83                             121
  CLUS_3                           118                              81
D66V6, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                           103                              68
  CLUS_2                            65                             111
  CLUS_3                           112                             109
D66V7, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                            47                              73
  CLUS_2                            96                             100
  CLUS_3                            41                              41
D66V8, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                            31                              26
  CLUS_2                            38                              46
  CLUS_3                            54                              54
  CLUS_4                            61                              88
D66V9, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                            42                              58
  CLUS_2                            32                              35
  CLUS_3                            45                              46
D66V10, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                            54                              56
  CLUS_2                            53                              57
  CLUS_3                            12                              26
D66V11, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                            57                              64
  CLUS_2                            82                             100
  CLUS_3                            74                              70
D66V12, multiclass
        clus
vv       DEL PEAK 34(19Q13.43) MUTATED DEL PEAK 34(19Q13.43) WILD-TYPE
  CLUS_1                             2                               3
  CLUS_2                           128                             153
  CLUS_3                            83                              78

Clustering(67) Variable = Del Peak 35(21q22.3) mutation analysis
D67V1, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                           93                            122
  CLUS_2                           75                            138
  CLUS_3                           50                             79
D67V2, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                           83                            150
  CLUS_2                           83                            116
  CLUS_3                           52                             73
D67V3, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                           58                            101
  CLUS_2                           66                             98
  CLUS_3                           94                            138
D67V4, multiclass
D67V5, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                           62                            104
  CLUS_2                           78                            126
  CLUS_3                           81                            118
D67V6, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                           74                             97
  CLUS_2                           64                            112
  CLUS_3                           82                            139
D67V7, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                           49                             71
  CLUS_2                           69                            127
  CLUS_3                           29                             53
D67V8, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                           19                             38
  CLUS_2                           27                             57
  CLUS_3                           43                             65
  CLUS_4                           58                             91
D67V9, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                           40                             60
  CLUS_2                           18                             49
  CLUS_3                           35                             56
D67V10, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                           35                             75
  CLUS_2                           46                             64
  CLUS_3                           12                             26
D67V11, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                           45                             76
  CLUS_2                           74                            108
  CLUS_3                           53                             91
D67V12, multiclass
        clus
vv       DEL PEAK 35(21Q22.3) MUTATED DEL PEAK 35(21Q22.3) WILD-TYPE
  CLUS_1                            1                              4
  CLUS_2                          112                            169
  CLUS_3                           59                            102

Clustering(68) Variable = Del Peak 36(22q13.32) mutation analysis
D68V1, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                           193                              22
  CLUS_2                           183                              30
  CLUS_3                           106                              23
D68V2, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                           197                              36
  CLUS_2                           181                              18
  CLUS_3                           104                              21
D68V3, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                           136                              23
  CLUS_2                           134                              30
  CLUS_3                           211                              21
D68V4, multiclass
D68V5, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                           132                              34
  CLUS_2                           182                              22
  CLUS_3                           179                              20
D68V6, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                           156                              15
  CLUS_2                           150                              26
  CLUS_3                           186                              35
D68V7, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                           106                              14
  CLUS_2                           173                              23
  CLUS_3                            64                              18
D68V8, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            49                               8
  CLUS_2                            77                               7
  CLUS_3                            93                              15
  CLUS_4                           124                              25
D68V9, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            81                              19
  CLUS_2                            59                               8
  CLUS_3                            84                               7
D68V10, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                           100                              10
  CLUS_2                            91                              19
  CLUS_3                            33                               5
D68V11, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                            96                              25
  CLUS_2                           163                              19
  CLUS_3                           129                              15
D68V12, multiclass
        clus
vv       DEL PEAK 36(22Q13.32) MUTATED DEL PEAK 36(22Q13.32) WILD-TYPE
  CLUS_1                             4                               1
  CLUS_2                           240                              41
  CLUS_3                           144                              17

Clustering(69) Variable = Del Peak 37(Xp21.1) mutation analysis
D69V1, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                         135                            80
  CLUS_2                         143                            70
  CLUS_3                          76                            53
D69V2, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                         147                            86
  CLUS_2                         127                            72
  CLUS_3                          80                            45
D69V3, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          91                            68
  CLUS_2                         107                            57
  CLUS_3                         156                            76
D69V4, multiclass
D69V5, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          99                            67
  CLUS_2                         142                            62
  CLUS_3                         123                            76
D69V6, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          98                            73
  CLUS_2                         110                            66
  CLUS_3                         156                            65
D69V7, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          72                            48
  CLUS_2                         133                            63
  CLUS_3                          51                            31
D69V8, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          40                            17
  CLUS_2                          63                            21
  CLUS_3                          67                            41
  CLUS_4                          86                            63
D69V9, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          64                            36
  CLUS_2                          41                            26
  CLUS_3                          56                            35
D69V10, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          70                            40
  CLUS_2                          71                            39
  CLUS_3                          20                            18
D69V11, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                          79                            42
  CLUS_2                         120                            62
  CLUS_3                          92                            52
D69V12, multiclass
        clus
vv       DEL PEAK 37(XP21.1) MUTATED DEL PEAK 37(XP21.1) WILD-TYPE
  CLUS_1                           3                             2
  CLUS_2                         189                            92
  CLUS_3                          99                            62
                     V1                      V2                      V3 
            "MRNA_CNMF"    "MRNA_CHIERARCHICAL"              "MIR_CNMF" 
                     V4                      V5                      V6 
    "MIR_CHIERARCHICAL"               "CN_CNMF"      "METHLYATION_CNMF" 
                     V7                      V8                      V9 
            "RPPA_CNMF"    "RPPA_CHIERARCHICAL"          "MRNASEQ_CNMF" 
                    V10                     V11                     V12 
"MRNASEQ_CHIERARCHICAL"           "MIRSEQ_CNMF"  "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
