
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.2.4054/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/375849/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/PRAD-TP/2907382/1.GDAC_mergedClustering.Finished/PRAD-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=PRAD-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=PRAD-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=188, in cluster file=187, common to both=187
[1]  47 187
[1] "Amp Peak  1(1q21.3) mutation analysis"
[1] 3
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                           12                           175 
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                           12                           175 
[1] "Amp Peak  2(3q26.2) mutation analysis"
[1] 3
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                           27                           160 
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                           27                           160 
[1] "Amp Peak  3(7p15.3) mutation analysis"
[1] 3
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                           35                           152 
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                           35                           152 
[1] "Amp Peak  4(7q34) mutation analysis"
[1] 3
  AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE 
                         32                         155 
  AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE 
                         32                         155 
[1] "Amp Peak  5(8p11.22) mutation analysis"
[1] 3
  AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE 
                            17                            170 
  AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE 
                            17                            170 
[1] "Amp Peak  6(8q21.13) mutation analysis"
[1] 3
  AMP PEAK  6(8Q21.13) MUTATED AMP PEAK  6(8Q21.13) WILD-TYPE 
                            46                            141 
  AMP PEAK  6(8Q21.13) MUTATED AMP PEAK  6(8Q21.13) WILD-TYPE 
                            46                            141 
[1] "Amp Peak  7(11q13.2) mutation analysis"
[1] 3
  AMP PEAK  7(11Q13.2) MUTATED AMP PEAK  7(11Q13.2) WILD-TYPE 
                            11                            176 
  AMP PEAK  7(11Q13.2) MUTATED AMP PEAK  7(11Q13.2) WILD-TYPE 
                            11                            176 
[1] "Amp Peak  8(12q24.32) mutation analysis"
[1] 3
  AMP PEAK  8(12Q24.32) MUTATED AMP PEAK  8(12Q24.32) WILD-TYPE 
                              7                             180 
  AMP PEAK  8(12Q24.32) MUTATED AMP PEAK  8(12Q24.32) WILD-TYPE 
                              7                             180 
[1] "Amp Peak  9(14q21.1) mutation analysis"
[1] 3
  AMP PEAK  9(14Q21.1) MUTATED AMP PEAK  9(14Q21.1) WILD-TYPE 
                            10                            177 
  AMP PEAK  9(14Q21.1) MUTATED AMP PEAK  9(14Q21.1) WILD-TYPE 
                            10                            177 
[1] "Amp Peak 10(20q13.33) mutation analysis"
[1] 3
  AMP PEAK 10(20Q13.33) MUTATED AMP PEAK 10(20Q13.33) WILD-TYPE 
                             12                             175 
  AMP PEAK 10(20Q13.33) MUTATED AMP PEAK 10(20Q13.33) WILD-TYPE 
                             12                             175 
[1] "Amp Peak 11(21q21.3) mutation analysis"
[1] 3
  AMP PEAK 11(21Q21.3) MUTATED AMP PEAK 11(21Q21.3) WILD-TYPE 
                             7                            180 
  AMP PEAK 11(21Q21.3) MUTATED AMP PEAK 11(21Q21.3) WILD-TYPE 
                             7                            180 
[1] "Amp Peak 12(Xp22.11) mutation analysis"
[1] 3
  AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE 
                             5                            182 
  AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE 
                             5                            182 
[1] "Amp Peak 13(Xp22.11) mutation analysis"
[1] 3
  AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE 
                             5                            182 
  AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE 
                             5                            182 
[1] "Amp Peak 14(Xp21.1) mutation analysis"
[1] 3
  AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE 
                            4                           183 
  AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE 
                            4                           183 
[1] "Amp Peak 15(Xq12) mutation analysis"
[1] 3
  AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE 
                          4                         183 
  AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE 
                          4                         183 
[1] "Amp Peak 16(Xq21.1) mutation analysis"
[1] 3
  AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE 
                            7                           180 
  AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE 
                            7                           180 
[1] "Amp Peak 17(Xq21.1) mutation analysis"
[1] 3
  AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE 
                            5                           182 
  AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE 
                            5                           182 
[1] "Amp Peak 18(Xq21.31) mutation analysis"
[1] 3
  AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE 
                             5                            182 
  AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE 
                             5                            182 
[1] "Amp Peak 19(Xq25) mutation analysis"
[1] 3
  AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE 
                          4                         183 
  AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE 
                          4                         183 
[1] "Amp Peak 20(Xq25) mutation analysis"
[1] 3
  AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE 
                          6                         181 
  AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE 
                          6                         181 
[1] "Amp Peak 21(Xq27.1) mutation analysis"
[1] 3
  AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE 
                            9                           178 
  AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE 
                            9                           178 
[1] "Del Peak  1(1p31.3) mutation analysis"
[1] 3
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                           22                           165 
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                           22                           165 
[1] "Del Peak  2(1p21.3) mutation analysis"
[1] 3
  DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE 
                           16                           171 
  DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE 
                           16                           171 
[1] "Del Peak  3(1q23.1) mutation analysis"
[1] 3
  DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE 
                            8                           179 
  DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE 
                            8                           179 
[1] "Del Peak  4(1q42.13) mutation analysis"
[1] 3
  DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE 
                            18                            169 
  DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE 
                            18                            169 
[1] "Del Peak  5(2q22.1) mutation analysis"
[1] 3
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                           22                           165 
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                           22                           165 
[1] "Del Peak  6(3p13) mutation analysis"
[1] 3
  DEL PEAK  6(3P13) MUTATED DEL PEAK  6(3P13) WILD-TYPE 
                         28                         159 
  DEL PEAK  6(3P13) MUTATED DEL PEAK  6(3P13) WILD-TYPE 
                         28                         159 
[1] "Del Peak  7(3q29) mutation analysis"
[1] 3
  DEL PEAK  7(3Q29) MUTATED DEL PEAK  7(3Q29) WILD-TYPE 
                         12                         175 
  DEL PEAK  7(3Q29) MUTATED DEL PEAK  7(3Q29) WILD-TYPE 
                         12                         175 
[1] "Del Peak  8(4q28.2) mutation analysis"
[1] 3
  DEL PEAK  8(4Q28.2) MUTATED DEL PEAK  8(4Q28.2) WILD-TYPE 
                           17                           170 
  DEL PEAK  8(4Q28.2) MUTATED DEL PEAK  8(4Q28.2) WILD-TYPE 
                           17                           170 
[1] "Del Peak  9(5q11.2) mutation analysis"
[1] 3
  DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE 
                           30                           157 
  DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE 
                           30                           157 
[1] "Del Peak 10(5q21.1) mutation analysis"
[1] 3
  DEL PEAK 10(5Q21.1) MUTATED DEL PEAK 10(5Q21.1) WILD-TYPE 
                           33                           154 
  DEL PEAK 10(5Q21.1) MUTATED DEL PEAK 10(5Q21.1) WILD-TYPE 
                           33                           154 
[1] "Del Peak 11(6q15) mutation analysis"
[1] 3
  DEL PEAK 11(6Q15) MUTATED DEL PEAK 11(6Q15) WILD-TYPE 
                         59                         128 
  DEL PEAK 11(6Q15) MUTATED DEL PEAK 11(6Q15) WILD-TYPE 
                         59                         128 
[1] "Del Peak 12(7q36.1) mutation analysis"
[1] 3
  DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE 
                            9                           178 
  DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE 
                            9                           178 
[1] "Del Peak 13(8p21.3) mutation analysis"
[1] 3
  DEL PEAK 13(8P21.3) MUTATED DEL PEAK 13(8P21.3) WILD-TYPE 
                          108                            79 
  DEL PEAK 13(8P21.3) MUTATED DEL PEAK 13(8P21.3) WILD-TYPE 
                          108                            79 
[1] "Del Peak 14(8p11.21) mutation analysis"
[1] 3
  DEL PEAK 14(8P11.21) MUTATED DEL PEAK 14(8P11.21) WILD-TYPE 
                            59                            128 
  DEL PEAK 14(8P11.21) MUTATED DEL PEAK 14(8P11.21) WILD-TYPE 
                            59                            128 
[1] "Del Peak 15(9p22.3) mutation analysis"
[1] 3
  DEL PEAK 15(9P22.3) MUTATED DEL PEAK 15(9P22.3) WILD-TYPE 
                           15                           172 
  DEL PEAK 15(9P22.3) MUTATED DEL PEAK 15(9P22.3) WILD-TYPE 
                           15                           172 
[1] "Del Peak 16(10q23.31) mutation analysis"
[1] 3
  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                             65                             122 
  DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE 
                             65                             122 
[1] "Del Peak 17(11q23.2) mutation analysis"
[1] 3
  DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE 
                            23                            164 
  DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE 
                            23                            164 
[1] "Del Peak 18(12p13.2) mutation analysis"
[1] 3
  DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE 
                            39                            148 
  DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE 
                            39                            148 
[1] "Del Peak 19(13q14.13) mutation analysis"
[1] 3
  DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE 
                             83                             104 
  DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE 
                             83                             104 
[1] "Del Peak 20(16q24.1) mutation analysis"
[1] 3
  DEL PEAK 20(16Q24.1) MUTATED DEL PEAK 20(16Q24.1) WILD-TYPE 
                            74                            113 
  DEL PEAK 20(16Q24.1) MUTATED DEL PEAK 20(16Q24.1) WILD-TYPE 
                            74                            113 
[1] "Del Peak 21(17p13.1) mutation analysis"
[1] 3
  DEL PEAK 21(17P13.1) MUTATED DEL PEAK 21(17P13.1) WILD-TYPE 
                            46                            141 
  DEL PEAK 21(17P13.1) MUTATED DEL PEAK 21(17P13.1) WILD-TYPE 
                            46                            141 
[1] "Del Peak 22(17q21.31) mutation analysis"
[1] 3
  DEL PEAK 22(17Q21.31) MUTATED DEL PEAK 22(17Q21.31) WILD-TYPE 
                             36                             151 
  DEL PEAK 22(17Q21.31) MUTATED DEL PEAK 22(17Q21.31) WILD-TYPE 
                             36                             151 
[1] "Del Peak 23(18q22.1) mutation analysis"
[1] 3
  DEL PEAK 23(18Q22.1) MUTATED DEL PEAK 23(18Q22.1) WILD-TYPE 
                            46                            141 
  DEL PEAK 23(18Q22.1) MUTATED DEL PEAK 23(18Q22.1) WILD-TYPE 
                            46                            141 
[1] "Del Peak 24(18q23) mutation analysis"
[1] 3
  DEL PEAK 24(18Q23) MUTATED DEL PEAK 24(18Q23) WILD-TYPE 
                          52                          135 
  DEL PEAK 24(18Q23) MUTATED DEL PEAK 24(18Q23) WILD-TYPE 
                          52                          135 
[1] "Del Peak 25(21q22.2) mutation analysis"
[1] 3
  DEL PEAK 25(21Q22.2) MUTATED DEL PEAK 25(21Q22.2) WILD-TYPE 
                            61                            126 
  DEL PEAK 25(21Q22.2) MUTATED DEL PEAK 25(21Q22.2) WILD-TYPE 
                            61                            126 
[1] "Del Peak 26(21q22.3) mutation analysis"
[1] 3
  DEL PEAK 26(21Q22.3) MUTATED DEL PEAK 26(21Q22.3) WILD-TYPE 
                            60                            127 
  DEL PEAK 26(21Q22.3) MUTATED DEL PEAK 26(21Q22.3) WILD-TYPE 
                            60                            127 
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "MRNASEQ_CNMF"         
[4] "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 

Input Data has 6 rows and 187 columns.

Variable 1:'CN_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "MRNASEQ_CNMF"         
[4] "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 187 columns, 0 survival variables, and 6 non-survival variables.
CN_CNMF, nv=4, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1q21.3) mutation analysis
D1V1, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                           1                            33
  CLUS_2                           2                            90
  CLUS_3                           9                            50
  CLUS_4                           0                             2
D1V2, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                           4                            51
  CLUS_2                           7                            70
  CLUS_3                           1                            54
D1V3, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                           3                            56
  CLUS_2                           1                            52
  CLUS_3                           7                            56
D1V4, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                           2                            47
  CLUS_2                           8                            67
  CLUS_3                           1                            50
D1V5, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                           6                            39
  CLUS_2                           0                            46
  CLUS_3                           2                            23
  CLUS_4                           3                            57
D1V6, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                           1                            29
  CLUS_2                           5                            64
  CLUS_3                           5                            72

Clustering(2) Variable = Amp Peak  2(3q26.2) mutation analysis
D2V1, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                           7                            27
  CLUS_2                           4                            88
  CLUS_3                          16                            43
  CLUS_4                           0                             2
D2V2, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                          13                            42
  CLUS_2                           9                            68
  CLUS_3                           5                            50
D2V3, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                          12                            47
  CLUS_2                           6                            47
  CLUS_3                           7                            56
D2V4, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                           9                            40
  CLUS_2                          11                            64
  CLUS_3                           5                            46
D2V5, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                           6                            39
  CLUS_2                           8                            38
  CLUS_3                           4                            21
  CLUS_4                           7                            53
D2V6, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                           6                            24
  CLUS_2                          11                            58
  CLUS_3                           8                            69

Clustering(3) Variable = Amp Peak  3(7p15.3) mutation analysis
D3V1, multiclass
        clus
vv       AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                           5                            29
  CLUS_2                           6                            86
  CLUS_3                          23                            36
  CLUS_4                           1                             1
D3V2, multiclass
        clus
vv       AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                          16                            39
  CLUS_2                          13                            64
  CLUS_3                           6                            49
D3V3, multiclass
        clus
vv       AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                          18                            41
  CLUS_2                           4                            49
  CLUS_3                          11                            52
D3V4, multiclass
        clus
vv       AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                          16                            33
  CLUS_2                          12                            63
  CLUS_3                           5                            46
D3V5, multiclass
        clus
vv       AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                           8                            37
  CLUS_2                           7                            39
  CLUS_3                           4                            21
  CLUS_4                          13                            47
D3V6, multiclass
        clus
vv       AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                           4                            26
  CLUS_2                          11                            58
  CLUS_3                          17                            60

Clustering(4) Variable = Amp Peak  4(7q34) mutation analysis
D4V1, multiclass
        clus
vv       AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                         6                          28
  CLUS_2                         6                          86
  CLUS_3                        19                          40
  CLUS_4                         1                           1
D4V2, multiclass
        clus
vv       AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                        17                          38
  CLUS_2                        11                          66
  CLUS_3                         4                          51
D4V3, multiclass
        clus
vv       AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                        18                          41
  CLUS_2                         3                          50
  CLUS_3                         9                          54
D4V4, multiclass
        clus
vv       AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                        17                          32
  CLUS_2                         9                          66
  CLUS_3                         4                          47
D4V5, multiclass
        clus
vv       AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                         9                          36
  CLUS_2                         6                          40
  CLUS_3                         4                          21
  CLUS_4                        10                          50
D4V6, multiclass
        clus
vv       AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                         4                          26
  CLUS_2                        11                          58
  CLUS_3                        14                          63

Clustering(5) Variable = Amp Peak  5(8p11.22) mutation analysis
D5V1, multiclass
        clus
vv       AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                            2                             32
  CLUS_2                            1                             91
  CLUS_3                           13                             46
  CLUS_4                            1                              1
D5V2, multiclass
        clus
vv       AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                            8                             47
  CLUS_2                            6                             71
  CLUS_3                            3                             52
D5V3, multiclass
        clus
vv       AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                           10                             49
  CLUS_2                            3                             50
  CLUS_3                            3                             60
D5V4, multiclass
        clus
vv       AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                            6                             43
  CLUS_2                            8                             67
  CLUS_3                            2                             49
D5V5, multiclass
        clus
vv       AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                            6                             39
  CLUS_2                            3                             43
  CLUS_3                            1                             24
  CLUS_4                            5                             55
D5V6, multiclass
        clus
vv       AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                            2                             28
  CLUS_2                            4                             65
  CLUS_3                            9                             68

Clustering(6) Variable = Amp Peak  6(8q21.13) mutation analysis
D6V1, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) MUTATED AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                            6                             28
  CLUS_2                            7                             85
  CLUS_3                           32                             27
  CLUS_4                            1                              1
D6V2, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) MUTATED AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                           22                             33
  CLUS_2                           17                             60
  CLUS_3                            7                             48
D6V3, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) MUTATED AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                           24                             35
  CLUS_2                            6                             47
  CLUS_3                           14                             49
D6V4, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) MUTATED AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                           19                             30
  CLUS_2                           19                             56
  CLUS_3                            6                             45
D6V5, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) MUTATED AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                           15                             30
  CLUS_2                            8                             38
  CLUS_3                            6                             19
  CLUS_4                           14                             46
D6V6, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) MUTATED AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                            7                             23
  CLUS_2                           13                             56
  CLUS_3                           23                             54

Clustering(7) Variable = Amp Peak  7(11q13.2) mutation analysis
D7V1, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) MUTATED AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                            0                             34
  CLUS_2                            1                             91
  CLUS_3                           10                             49
  CLUS_4                            0                              2
D7V2, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) MUTATED AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                            5                             50
  CLUS_2                            5                             72
  CLUS_3                            1                             54
D7V3, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) MUTATED AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                            6                             53
  CLUS_2                            1                             52
  CLUS_3                            3                             60
D7V4, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) MUTATED AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                            4                             45
  CLUS_2                            5                             70
  CLUS_3                            1                             50
D7V5, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) MUTATED AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                            2                             43
  CLUS_2                            2                             44
  CLUS_3                            2                             23
  CLUS_4                            3                             57
D7V6, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) MUTATED AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                            2                             28
  CLUS_2                            2                             67
  CLUS_3                            5                             72

Clustering(8) Variable = Amp Peak  8(12q24.32) mutation analysis
D8V1, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) MUTATED AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                             0                              34
  CLUS_2                             0                              92
  CLUS_3                             7                              52
  CLUS_4                             0                               2
D8V2, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) MUTATED AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                             4                              51
  CLUS_2                             1                              76
  CLUS_3                             2                              53
D8V3, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) MUTATED AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                             3                              56
  CLUS_2                             2                              51
  CLUS_3                             2                              61
D8V4, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) MUTATED AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                             0                              49
  CLUS_2                             5                              70
  CLUS_3                             2                              49
D8V5, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) MUTATED AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                             3                              42
  CLUS_2                             2                              44
  CLUS_3                             0                              25
  CLUS_4                             1                              59
D8V6, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) MUTATED AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                             1                              29
  CLUS_2                             3                              66
  CLUS_3                             2                              75

Clustering(9) Variable = Amp Peak  9(14q21.1) mutation analysis
D9V1, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) MUTATED AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                            3                             31
  CLUS_2                            1                             91
  CLUS_3                            6                             53
  CLUS_4                            0                              2
D9V2, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) MUTATED AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                            6                             49
  CLUS_2                            2                             75
  CLUS_3                            2                             53
D9V3, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) MUTATED AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                            7                             52
  CLUS_2                            0                             53
  CLUS_3                            2                             61
D9V4, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) MUTATED AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                            3                             46
  CLUS_2                            5                             70
  CLUS_3                            1                             50
D9V5, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) MUTATED AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                            3                             42
  CLUS_2                            1                             45
  CLUS_3                            2                             23
  CLUS_4                            3                             57
D9V6, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) MUTATED AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                            4                             26
  CLUS_2                            3                             66
  CLUS_3                            2                             75

Clustering(10) Variable = Amp Peak 10(20q13.33) mutation analysis
D10V1, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) MUTATED AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                             2                              32
  CLUS_2                             1                              91
  CLUS_3                             9                              50
  CLUS_4                             0                               2
D10V2, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) MUTATED AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                             9                              46
  CLUS_2                             2                              75
  CLUS_3                             1                              54
D10V3, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) MUTATED AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                             9                              50
  CLUS_2                             1                              52
  CLUS_3                             2                              61
D10V4, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) MUTATED AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                             8                              41
  CLUS_2                             3                              72
  CLUS_3                             1                              50
D10V5, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) MUTATED AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                             2                              43
  CLUS_2                             3                              43
  CLUS_3                             4                              21
  CLUS_4                             3                              57
D10V6, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) MUTATED AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                             4                              26
  CLUS_2                             2                              67
  CLUS_3                             6                              71

Clustering(11) Variable = Amp Peak 11(21q21.3) mutation analysis
D11V1, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) MUTATED AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                            0                             34
  CLUS_2                            1                             91
  CLUS_3                            6                             53
  CLUS_4                            0                              2
D11V2, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) MUTATED AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                            3                             52
  CLUS_2                            4                             73
  CLUS_3                            0                             55
D11V3, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) MUTATED AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                            2                             57
  CLUS_2                            0                             53
  CLUS_3                            4                             59
D11V4, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) MUTATED AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                            2                             47
  CLUS_2                            4                             71
  CLUS_3                            0                             51
D11V5, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) MUTATED AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                            1                             44
  CLUS_2                            1                             45
  CLUS_3                            1                             24
  CLUS_4                            3                             57
D11V6, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) MUTATED AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                            0                             30
  CLUS_2                            1                             68
  CLUS_3                            5                             72

Clustering(12) Variable = Amp Peak 12(Xp22.11) mutation analysis
D12V1, multiclass
        clus
vv       AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                            1                             33
  CLUS_2                            1                             91
  CLUS_3                            3                             56
  CLUS_4                            0                              2
D12V2, multiclass
        clus
vv       AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                            1                             54
  CLUS_2                            2                             75
  CLUS_3                            2                             53
D12V3, multiclass
        clus
vv       AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                            2                             57
  CLUS_2                            2                             51
  CLUS_3                            1                             62
D12V4, multiclass
        clus
vv       AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                            2                             47
  CLUS_2                            1                             74
  CLUS_3                            2                             49
D12V5, multiclass
        clus
vv       AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                            1                             44
  CLUS_2                            0                             46
  CLUS_3                            0                             25
  CLUS_4                            4                             56
D12V6, multiclass
        clus
vv       AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                            0                             30
  CLUS_2                            1                             68
  CLUS_3                            4                             73

Clustering(13) Variable = Amp Peak 13(Xp22.11) mutation analysis
D13V1, multiclass
        clus
vv       AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                            0                             34
  CLUS_2                            3                             89
  CLUS_3                            2                             57
  CLUS_4                            0                              2
D13V2, multiclass
        clus
vv       AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                            2                             53
  CLUS_2                            1                             76
  CLUS_3                            2                             53
D13V3, multiclass
        clus
vv       AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                            2                             57
  CLUS_2                            1                             52
  CLUS_3                            2                             61
D13V4, multiclass
        clus
vv       AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                            2                             47
  CLUS_2                            2                             73
  CLUS_3                            1                             50
D13V5, multiclass
        clus
vv       AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                            1                             44
  CLUS_2                            2                             44
  CLUS_3                            1                             24
  CLUS_4                            1                             59
D13V6, multiclass
        clus
vv       AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                            2                             28
  CLUS_2                            1                             68
  CLUS_3                            2                             75

Clustering(14) Variable = Amp Peak 14(Xp21.1) mutation analysis
D14V1, multiclass
        clus
vv       AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                           0                            34
  CLUS_2                           2                            90
  CLUS_3                           2                            57
  CLUS_4                           0                             2
D14V2, multiclass
        clus
vv       AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                           1                            54
  CLUS_2                           3                            74
  CLUS_3                           0                            55
D14V3, multiclass
        clus
vv       AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                           1                            58
  CLUS_2                           1                            52
  CLUS_3                           2                            61
D14V4, multiclass
        clus
vv       AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                           1                            48
  CLUS_2                           2                            73
  CLUS_3                           1                            50
D14V5, multiclass
        clus
vv       AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                           2                            43
  CLUS_2                           2                            44
  CLUS_3                           0                            25
  CLUS_4                           0                            60
D14V6, multiclass
        clus
vv       AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                           1                            29
  CLUS_2                           2                            67
  CLUS_3                           1                            76

Clustering(15) Variable = Amp Peak 15(Xq12) mutation analysis
D15V1, multiclass
        clus
vv       AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                         0                          34
  CLUS_2                         1                          91
  CLUS_3                         3                          56
  CLUS_4                         0                           2
D15V2, multiclass
        clus
vv       AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                         3                          52
  CLUS_2                         1                          76
  CLUS_3                         0                          55
D15V3, multiclass
        clus
vv       AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                         3                          56
  CLUS_2                         0                          53
  CLUS_3                         0                          63
D15V4, multiclass
        clus
vv       AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                         3                          46
  CLUS_2                         0                          75
  CLUS_3                         0                          51
D15V5, multiclass
        clus
vv       AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                         1                          44
  CLUS_2                         0                          46
  CLUS_3                         1                          24
  CLUS_4                         1                          59
D15V6, multiclass
        clus
vv       AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                         1                          29
  CLUS_2                         0                          69
  CLUS_3                         2                          75

Clustering(16) Variable = Amp Peak 16(Xq21.1) mutation analysis
D16V1, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                           1                            33
  CLUS_2                           2                            90
  CLUS_3                           4                            55
  CLUS_4                           0                             2
D16V2, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                           3                            52
  CLUS_2                           4                            73
  CLUS_3                           0                            55
D16V3, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                           3                            56
  CLUS_2                           0                            53
  CLUS_3                           4                            59
D16V4, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                           3                            46
  CLUS_2                           4                            71
  CLUS_3                           0                            51
D16V5, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                           3                            42
  CLUS_2                           3                            43
  CLUS_3                           0                            25
  CLUS_4                           1                            59
D16V6, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                           1                            29
  CLUS_2                           4                            65
  CLUS_3                           2                            75

Clustering(17) Variable = Amp Peak 17(Xq21.1) mutation analysis
D17V1, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                           1                            33
  CLUS_2                           1                            91
  CLUS_3                           3                            56
  CLUS_4                           0                             2
D17V2, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                           5                            50
  CLUS_2                           0                            77
  CLUS_3                           0                            55
D17V3, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                           3                            56
  CLUS_2                           1                            52
  CLUS_3                           1                            62
D17V4, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                           3                            46
  CLUS_2                           1                            74
  CLUS_3                           1                            50
D17V5, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                           2                            43
  CLUS_2                           1                            45
  CLUS_3                           0                            25
  CLUS_4                           2                            58
D17V6, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                           0                            30
  CLUS_2                           2                            67
  CLUS_3                           3                            74

Clustering(18) Variable = Amp Peak 18(Xq21.31) mutation analysis
D18V1, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                            0                             34
  CLUS_2                            1                             91
  CLUS_3                            4                             55
  CLUS_4                            0                              2
D18V2, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                            3                             52
  CLUS_2                            2                             75
  CLUS_3                            0                             55
D18V3, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                            3                             56
  CLUS_2                            0                             53
  CLUS_3                            2                             61
D18V4, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                            3                             46
  CLUS_2                            2                             73
  CLUS_3                            0                             51
D18V5, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                            2                             43
  CLUS_2                            1                             45
  CLUS_3                            1                             24
  CLUS_4                            1                             59
D18V6, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                            1                             29
  CLUS_2                            2                             67
  CLUS_3                            2                             75

Clustering(19) Variable = Amp Peak 19(Xq25) mutation analysis
D19V1, multiclass
        clus
vv       AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                         0                          34
  CLUS_2                         0                          92
  CLUS_3                         4                          55
  CLUS_4                         0                           2
D19V2, multiclass
        clus
vv       AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                         2                          53
  CLUS_2                         0                          77
  CLUS_3                         2                          53
D19V3, multiclass
        clus
vv       AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                         2                          57
  CLUS_2                         2                          51
  CLUS_3                         0                          63
D19V4, multiclass
        clus
vv       AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                         2                          47
  CLUS_2                         0                          75
  CLUS_3                         2                          49
D19V5, multiclass
        clus
vv       AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                         1                          44
  CLUS_2                         0                          46
  CLUS_3                         0                          25
  CLUS_4                         3                          57
D19V6, multiclass
        clus
vv       AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                         0                          30
  CLUS_2                         0                          69
  CLUS_3                         4                          73

Clustering(20) Variable = Amp Peak 20(Xq25) mutation analysis
D20V1, multiclass
        clus
vv       AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                         1                          33
  CLUS_2                         3                          89
  CLUS_3                         2                          57
  CLUS_4                         0                           2
D20V2, multiclass
        clus
vv       AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                         3                          52
  CLUS_2                         3                          74
  CLUS_3                         0                          55
D20V3, multiclass
        clus
vv       AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                         3                          56
  CLUS_2                         3                          50
  CLUS_3                         0                          63
D20V4, multiclass
        clus
vv       AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                         3                          46
  CLUS_2                         2                          73
  CLUS_3                         1                          50
D20V5, multiclass
        clus
vv       AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                         1                          44
  CLUS_2                         4                          42
  CLUS_3                         0                          25
  CLUS_4                         1                          59
D20V6, multiclass
        clus
vv       AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                         0                          30
  CLUS_2                         4                          65
  CLUS_3                         2                          75

Clustering(21) Variable = Amp Peak 21(Xq27.1) mutation analysis
D21V1, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                           4                            30
  CLUS_2                           1                            91
  CLUS_3                           3                            56
  CLUS_4                           1                             1
D21V2, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                           4                            51
  CLUS_2                           4                            73
  CLUS_3                           1                            54
D21V3, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                           4                            55
  CLUS_2                           2                            51
  CLUS_3                           3                            60
D21V4, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                           3                            46
  CLUS_2                           3                            72
  CLUS_3                           3                            48
D21V5, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                           1                            44
  CLUS_2                           0                            46
  CLUS_3                           2                            23
  CLUS_4                           6                            54
D21V6, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                           2                            28
  CLUS_2                           0                            69
  CLUS_3                           7                            70

Clustering(22) Variable = Del Peak  1(1p31.3) mutation analysis
D22V1, multiclass
        clus
vv       DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                           2                            32
  CLUS_2                           7                            85
  CLUS_3                          13                            46
  CLUS_4                           0                             2
D22V2, multiclass
        clus
vv       DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                           4                            51
  CLUS_2                          17                            60
  CLUS_3                           1                            54
D22V3, multiclass
        clus
vv       DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                           5                            54
  CLUS_2                           1                            52
  CLUS_3                          14                            49
D22V4, multiclass
        clus
vv       DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                           4                            45
  CLUS_2                          15                            60
  CLUS_3                           1                            50
D22V5, multiclass
        clus
vv       DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                           7                            38
  CLUS_2                           2                            44
  CLUS_3                           2                            23
  CLUS_4                          10                            50
D22V6, multiclass
        clus
vv       DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                           1                            29
  CLUS_2                           7                            62
  CLUS_3                          13                            64

Clustering(23) Variable = Del Peak  2(1p21.3) mutation analysis
D23V1, multiclass
        clus
vv       DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                           5                            29
  CLUS_2                           2                            90
  CLUS_3                           9                            50
  CLUS_4                           0                             2
D23V2, multiclass
        clus
vv       DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                           5                            50
  CLUS_2                           8                            69
  CLUS_3                           3                            52
D23V3, multiclass
        clus
vv       DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                           5                            54
  CLUS_2                           4                            49
  CLUS_3                           6                            57
D23V4, multiclass
        clus
vv       DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                           4                            45
  CLUS_2                           7                            68
  CLUS_3                           4                            47
D23V5, multiclass
        clus
vv       DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                           5                            40
  CLUS_2                           1                            45
  CLUS_3                           1                            24
  CLUS_4                           9                            51
D23V6, multiclass
        clus
vv       DEL PEAK  2(1P21.3) MUTATED DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                           2                            28
  CLUS_2                           7                            62
  CLUS_3                           7                            70

Clustering(24) Variable = Del Peak  3(1q23.1) mutation analysis
D24V1, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                           2                            32
  CLUS_2                           3                            89
  CLUS_3                           2                            57
  CLUS_4                           1                             1
D24V2, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                           3                            52
  CLUS_2                           5                            72
  CLUS_3                           0                            55
D24V3, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                           4                            55
  CLUS_2                           0                            53
  CLUS_3                           4                            59
D24V4, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                           4                            45
  CLUS_2                           4                            71
  CLUS_3                           0                            51
D24V5, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                           2                            43
  CLUS_2                           0                            46
  CLUS_3                           0                            25
  CLUS_4                           6                            54
D24V6, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) MUTATED DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                           1                            29
  CLUS_2                           2                            67
  CLUS_3                           5                            72

Clustering(25) Variable = Del Peak  4(1q42.13) mutation analysis
D25V1, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                            4                             30
  CLUS_2                            6                             86
  CLUS_3                            8                             51
  CLUS_4                            0                              2
D25V2, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                           11                             44
  CLUS_2                            6                             71
  CLUS_3                            1                             54
D25V3, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                            7                             52
  CLUS_2                            4                             49
  CLUS_3                            6                             57
D25V4, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                            6                             43
  CLUS_2                            7                             68
  CLUS_3                            4                             47
D25V5, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                            5                             40
  CLUS_2                            4                             42
  CLUS_3                            0                             25
  CLUS_4                            8                             52
D25V6, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) MUTATED DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                            2                             28
  CLUS_2                            6                             63
  CLUS_3                            9                             68

Clustering(26) Variable = Del Peak  5(2q22.1) mutation analysis
D26V1, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                           8                            26
  CLUS_2                           2                            90
  CLUS_3                          11                            48
  CLUS_4                           1                             1
D26V2, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          13                            42
  CLUS_2                           8                            69
  CLUS_3                           1                            54
D26V3, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          11                            48
  CLUS_2                           3                            50
  CLUS_3                           7                            56
D26V4, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          11                            38
  CLUS_2                           7                            68
  CLUS_3                           3                            48
D26V5, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                           7                            38
  CLUS_2                           2                            44
  CLUS_3                           0                            25
  CLUS_4                          12                            48
D26V6, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                           1                            29
  CLUS_2                           4                            65
  CLUS_3                          16                            61

Clustering(27) Variable = Del Peak  6(3p13) mutation analysis
D27V1, multiclass
        clus
vv       DEL PEAK  6(3P13) MUTATED DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                         3                          31
  CLUS_2                        16                          76
  CLUS_3                         9                          50
  CLUS_4                         0                           2
D27V2, multiclass
        clus
vv       DEL PEAK  6(3P13) MUTATED DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                         4                          51
  CLUS_2                        18                          59
  CLUS_3                         6                          49
D27V3, multiclass
        clus
vv       DEL PEAK  6(3P13) MUTATED DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                         6                          53
  CLUS_2                         8                          45
  CLUS_3                        13                          50
D27V4, multiclass
        clus
vv       DEL PEAK  6(3P13) MUTATED DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                         4                          45
  CLUS_2                        18                          57
  CLUS_3                         5                          46
D27V5, multiclass
        clus
vv       DEL PEAK  6(3P13) MUTATED DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                        10                          35
  CLUS_2                         8                          38
  CLUS_3                         5                          20
  CLUS_4                         5                          55
D27V6, multiclass
        clus
vv       DEL PEAK  6(3P13) MUTATED DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                         4                          26
  CLUS_2                        16                          53
  CLUS_3                         8                          69

Clustering(28) Variable = Del Peak  7(3q29) mutation analysis
D28V1, multiclass
        clus
vv       DEL PEAK  7(3Q29) MUTATED DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                         1                          33
  CLUS_2                         7                          85
  CLUS_3                         4                          55
  CLUS_4                         0                           2
D28V2, multiclass
        clus
vv       DEL PEAK  7(3Q29) MUTATED DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                         2                          53
  CLUS_2                         9                          68
  CLUS_3                         1                          54
D28V3, multiclass
        clus
vv       DEL PEAK  7(3Q29) MUTATED DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                         3                          56
  CLUS_2                         1                          52
  CLUS_3                         8                          55
D28V4, multiclass
        clus
vv       DEL PEAK  7(3Q29) MUTATED DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                         3                          46
  CLUS_2                         9                          66
  CLUS_3                         0                          51
D28V5, multiclass
        clus
vv       DEL PEAK  7(3Q29) MUTATED DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                         2                          43
  CLUS_2                         2                          44
  CLUS_3                         3                          22
  CLUS_4                         5                          55
D28V6, multiclass
        clus
vv       DEL PEAK  7(3Q29) MUTATED DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                         2                          28
  CLUS_2                         5                          64
  CLUS_3                         5                          72

Clustering(29) Variable = Del Peak  8(4q28.2) mutation analysis
D29V1, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) MUTATED DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                           4                            30
  CLUS_2                           1                            91
  CLUS_3                          12                            47
  CLUS_4                           0                             2
D29V2, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) MUTATED DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                          12                            43
  CLUS_2                           5                            72
  CLUS_3                           0                            55
D29V3, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) MUTATED DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                          10                            49
  CLUS_2                           1                            52
  CLUS_3                           4                            59
D29V4, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) MUTATED DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                           8                            41
  CLUS_2                           4                            71
  CLUS_3                           3                            48
D29V5, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) MUTATED DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                           3                            42
  CLUS_2                           2                            44
  CLUS_3                           1                            24
  CLUS_4                           8                            52
D29V6, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) MUTATED DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                           2                            28
  CLUS_2                           2                            67
  CLUS_3                          10                            67

Clustering(30) Variable = Del Peak  9(5q11.2) mutation analysis
D30V1, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                           9                            25
  CLUS_2                           2                            90
  CLUS_3                          19                            40
  CLUS_4                           0                             2
D30V2, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                          16                            39
  CLUS_2                          12                            65
  CLUS_3                           2                            53
D30V3, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                          13                            46
  CLUS_2                           4                            49
  CLUS_3                          11                            52
D30V4, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                          11                            38
  CLUS_2                          14                            61
  CLUS_3                           3                            48
D30V5, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                          11                            34
  CLUS_2                           5                            41
  CLUS_3                           4                            21
  CLUS_4                           7                            53
D30V6, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) MUTATED DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                           3                            27
  CLUS_2                          12                            57
  CLUS_3                          12                            65

Clustering(31) Variable = Del Peak 10(5q21.1) mutation analysis
D31V1, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) MUTATED DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                          14                            20
  CLUS_2                           0                            92
  CLUS_3                          19                            40
  CLUS_4                           0                             2
D31V2, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) MUTATED DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                          22                            33
  CLUS_2                           8                            69
  CLUS_3                           3                            52
D31V3, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) MUTATED DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                          19                            40
  CLUS_2                           6                            47
  CLUS_3                           6                            57
D31V4, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) MUTATED DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                          16                            33
  CLUS_2                           8                            67
  CLUS_3                           7                            44
D31V5, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) MUTATED DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                          12                            33
  CLUS_2                           6                            40
  CLUS_3                           3                            22
  CLUS_4                           9                            51
D31V6, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) MUTATED DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                           3                            27
  CLUS_2                          12                            57
  CLUS_3                          15                            62

Clustering(32) Variable = Del Peak 11(6q15) mutation analysis
D32V1, multiclass
        clus
vv       DEL PEAK 11(6Q15) MUTATED DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                        27                           7
  CLUS_2                         4                          88
  CLUS_3                        27                          32
  CLUS_4                         1                           1
D32V2, multiclass
        clus
vv       DEL PEAK 11(6Q15) MUTATED DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                        35                          20
  CLUS_2                        22                          55
  CLUS_3                         2                          53
D32V3, multiclass
        clus
vv       DEL PEAK 11(6Q15) MUTATED DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                        32                          27
  CLUS_2                         5                          48
  CLUS_3                        18                          45
D32V4, multiclass
        clus
vv       DEL PEAK 11(6Q15) MUTATED DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                        26                          23
  CLUS_2                        23                          52
  CLUS_3                         6                          45
D32V5, multiclass
        clus
vv       DEL PEAK 11(6Q15) MUTATED DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                        23                          22
  CLUS_2                         5                          41
  CLUS_3                         6                          19
  CLUS_4                        21                          39
D32V6, multiclass
        clus
vv       DEL PEAK 11(6Q15) MUTATED DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                         9                          21
  CLUS_2                        20                          49
  CLUS_3                        26                          51

Clustering(33) Variable = Del Peak 12(7q36.1) mutation analysis
D33V1, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           1                            33
  CLUS_2                           3                            89
  CLUS_3                           5                            54
  CLUS_4                           0                             2
D33V2, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           2                            53
  CLUS_2                           5                            72
  CLUS_3                           2                            53
D33V3, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           3                            56
  CLUS_2                           1                            52
  CLUS_3                           4                            59
D33V4, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           2                            47
  CLUS_2                           5                            70
  CLUS_3                           1                            50
D33V5, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           2                            43
  CLUS_2                           2                            44
  CLUS_3                           0                            25
  CLUS_4                           4                            56
D33V6, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) MUTATED DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                           0                            30
  CLUS_2                           4                            65
  CLUS_3                           4                            73

Clustering(34) Variable = Del Peak 13(8p21.3) mutation analysis
D34V1, multiclass
        clus
vv       DEL PEAK 13(8P21.3) MUTATED DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                          17                            17
  CLUS_2                          38                            54
  CLUS_3                          52                             7
  CLUS_4                           1                             1
D34V2, multiclass
        clus
vv       DEL PEAK 13(8P21.3) MUTATED DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                          31                            24
  CLUS_2                          59                            18
  CLUS_3                          18                            37
D34V3, multiclass
        clus
vv       DEL PEAK 13(8P21.3) MUTATED DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                          30                            29
  CLUS_2                          24                            29
  CLUS_3                          51                            12
D34V4, multiclass
        clus
vv       DEL PEAK 13(8P21.3) MUTATED DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                          25                            24
  CLUS_2                          58                            17
  CLUS_3                          22                            29
D34V5, multiclass
        clus
vv       DEL PEAK 13(8P21.3) MUTATED DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                          36                             9
  CLUS_2                          24                            22
  CLUS_3                           9                            16
  CLUS_4                          36                            24
D34V6, multiclass
        clus
vv       DEL PEAK 13(8P21.3) MUTATED DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                          12                            18
  CLUS_2                          45                            24
  CLUS_3                          48                            29

Clustering(35) Variable = Del Peak 14(8p11.21) mutation analysis
D35V1, multiclass
        clus
vv       DEL PEAK 14(8P11.21) MUTATED DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            8                             26
  CLUS_2                           23                             69
  CLUS_3                           28                             31
  CLUS_4                            0                              2
D35V2, multiclass
        clus
vv       DEL PEAK 14(8P11.21) MUTATED DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           17                             38
  CLUS_2                           35                             42
  CLUS_3                            7                             48
D35V3, multiclass
        clus
vv       DEL PEAK 14(8P11.21) MUTATED DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           17                             42
  CLUS_2                           10                             43
  CLUS_3                           32                             31
D35V4, multiclass
        clus
vv       DEL PEAK 14(8P11.21) MUTATED DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           16                             33
  CLUS_2                           33                             42
  CLUS_3                           10                             41
D35V5, multiclass
        clus
vv       DEL PEAK 14(8P11.21) MUTATED DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                           20                             25
  CLUS_2                           13                             33
  CLUS_3                            6                             19
  CLUS_4                           20                             40
D35V6, multiclass
        clus
vv       DEL PEAK 14(8P11.21) MUTATED DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                            6                             24
  CLUS_2                           24                             45
  CLUS_3                           29                             48

Clustering(36) Variable = Del Peak 15(9p22.3) mutation analysis
D36V1, multiclass
        clus
vv       DEL PEAK 15(9P22.3) MUTATED DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                           0                            34
  CLUS_2                           3                            89
  CLUS_3                          12                            47
  CLUS_4                           0                             2
D36V2, multiclass
        clus
vv       DEL PEAK 15(9P22.3) MUTATED DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                           6                            49
  CLUS_2                           7                            70
  CLUS_3                           2                            53
D36V3, multiclass
        clus
vv       DEL PEAK 15(9P22.3) MUTATED DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                           4                            55
  CLUS_2                           2                            51
  CLUS_3                           8                            55
D36V4, multiclass
        clus
vv       DEL PEAK 15(9P22.3) MUTATED DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                           3                            46
  CLUS_2                           9                            66
  CLUS_3                           2                            49
D36V5, multiclass
        clus
vv       DEL PEAK 15(9P22.3) MUTATED DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                           3                            42
  CLUS_2                           2                            44
  CLUS_3                           3                            22
  CLUS_4                           5                            55
D36V6, multiclass
        clus
vv       DEL PEAK 15(9P22.3) MUTATED DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                           2                            28
  CLUS_2                           5                            64
  CLUS_3                           6                            71

Clustering(37) Variable = Del Peak 16(10q23.31) mutation analysis
D37V1, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                             4                              30
  CLUS_2                            24                              68
  CLUS_3                            36                              23
  CLUS_4                             1                               1
D37V2, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            12                              43
  CLUS_2                            43                              34
  CLUS_3                            10                              45
D37V3, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            13                              46
  CLUS_2                             9                              44
  CLUS_3                            40                              23
D37V4, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            10                              39
  CLUS_2                            43                              32
  CLUS_3                             9                              42
D37V5, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                            22                              23
  CLUS_2                            14                              32
  CLUS_3                             4                              21
  CLUS_4                            22                              38
D37V6, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) MUTATED DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                             5                              25
  CLUS_2                            25                              44
  CLUS_3                            32                              45

Clustering(38) Variable = Del Peak 17(11q23.2) mutation analysis
D38V1, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                            2                             32
  CLUS_2                            8                             84
  CLUS_3                           13                             46
  CLUS_4                            0                              2
D38V2, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                           10                             45
  CLUS_2                            9                             68
  CLUS_3                            4                             51
D38V3, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                            6                             53
  CLUS_2                            7                             46
  CLUS_3                            8                             55
D38V4, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                            5                             44
  CLUS_2                            9                             66
  CLUS_3                            7                             44
D38V5, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                            8                             37
  CLUS_2                            3                             43
  CLUS_3                            2                             23
  CLUS_4                            9                             51
D38V6, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) MUTATED DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                            3                             27
  CLUS_2                            6                             63
  CLUS_3                           13                             64

Clustering(39) Variable = Del Peak 18(12p13.2) mutation analysis
D39V1, multiclass
        clus
vv       DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                            6                             28
  CLUS_2                            9                             83
  CLUS_3                           24                             35
  CLUS_4                            0                              2
D39V2, multiclass
        clus
vv       DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                           16                             39
  CLUS_2                           19                             58
  CLUS_3                            4                             51
D39V3, multiclass
        clus
vv       DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                           13                             46
  CLUS_2                            9                             44
  CLUS_3                           16                             47
D39V4, multiclass
        clus
vv       DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                            9                             40
  CLUS_2                           22                             53
  CLUS_3                            7                             44
D39V5, multiclass
        clus
vv       DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                           16                             29
  CLUS_2                            6                             40
  CLUS_3                            5                             20
  CLUS_4                           10                             50
D39V6, multiclass
        clus
vv       DEL PEAK 18(12P13.2) MUTATED DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                            5                             25
  CLUS_2                           15                             54
  CLUS_3                           17                             60

Clustering(40) Variable = Del Peak 19(13q14.13) mutation analysis
D40V1, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                            21                              13
  CLUS_2                            27                              65
  CLUS_3                            34                              25
  CLUS_4                             1                               1
D40V2, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                            29                              26
  CLUS_2                            40                              37
  CLUS_3                            14                              41
D40V3, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                            30                              29
  CLUS_2                            14                              39
  CLUS_3                            37                              26
D40V4, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                            28                              21
  CLUS_2                            39                              36
  CLUS_3                            14                              37
D40V5, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                            25                              20
  CLUS_2                            17                              29
  CLUS_3                            10                              15
  CLUS_4                            29                              31
D40V6, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) MUTATED DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                            13                              17
  CLUS_2                            28                              41
  CLUS_3                            40                              37

Clustering(41) Variable = Del Peak 20(16q24.1) mutation analysis
D41V1, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) MUTATED DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                            7                             27
  CLUS_2                           23                             69
  CLUS_3                           44                             15
  CLUS_4                            0                              2
D41V2, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) MUTATED DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                           19                             36
  CLUS_2                           41                             36
  CLUS_3                           14                             41
D41V3, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) MUTATED DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                           18                             41
  CLUS_2                           19                             34
  CLUS_3                           34                             29
D41V4, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) MUTATED DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                           13                             36
  CLUS_2                           39                             36
  CLUS_3                           19                             32
D41V5, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) MUTATED DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                           21                             24
  CLUS_2                           18                             28
  CLUS_3                            3                             22
  CLUS_4                           28                             32
D41V6, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) MUTATED DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                            5                             25
  CLUS_2                           29                             40
  CLUS_3                           36                             41

Clustering(42) Variable = Del Peak 21(17p13.1) mutation analysis
D42V1, multiclass
        clus
vv       DEL PEAK 21(17P13.1) MUTATED DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                            3                             31
  CLUS_2                           10                             82
  CLUS_3                           32                             27
  CLUS_4                            1                              1
D42V2, multiclass
        clus
vv       DEL PEAK 21(17P13.1) MUTATED DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                           11                             44
  CLUS_2                           25                             52
  CLUS_3                           10                             45
D42V3, multiclass
        clus
vv       DEL PEAK 21(17P13.1) MUTATED DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                           10                             49
  CLUS_2                           10                             43
  CLUS_3                           23                             40
D42V4, multiclass
        clus
vv       DEL PEAK 21(17P13.1) MUTATED DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                            7                             42
  CLUS_2                           28                             47
  CLUS_3                            8                             43
D42V5, multiclass
        clus
vv       DEL PEAK 21(17P13.1) MUTATED DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                           14                             31
  CLUS_2                           10                             36
  CLUS_3                            3                             22
  CLUS_4                           15                             45
D42V6, multiclass
        clus
vv       DEL PEAK 21(17P13.1) MUTATED DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                            3                             27
  CLUS_2                           22                             47
  CLUS_3                           17                             60

Clustering(43) Variable = Del Peak 22(17q21.31) mutation analysis
D43V1, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) MUTATED DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                             3                              31
  CLUS_2                            13                              79
  CLUS_3                            19                              40
  CLUS_4                             1                               1
D43V2, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) MUTATED DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                             4                              51
  CLUS_2                            27                              50
  CLUS_3                             5                              50
D43V3, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) MUTATED DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                             6                              53
  CLUS_2                             4                              49
  CLUS_3                            24                              39
D43V4, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) MUTATED DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                             3                              46
  CLUS_2                            26                              49
  CLUS_3                             5                              46
D43V5, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) MUTATED DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                             8                              37
  CLUS_2                            10                              36
  CLUS_3                             2                              23
  CLUS_4                            13                              47
D43V6, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) MUTATED DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                             3                              27
  CLUS_2                            12                              57
  CLUS_3                            18                              59

Clustering(44) Variable = Del Peak 23(18q22.1) mutation analysis
D44V1, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) MUTATED DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                            3                             31
  CLUS_2                           10                             82
  CLUS_3                           33                             26
  CLUS_4                            0                              2
D44V2, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) MUTATED DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                           14                             41
  CLUS_2                           21                             56
  CLUS_3                           11                             44
D44V3, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) MUTATED DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                           14                             45
  CLUS_2                            9                             44
  CLUS_3                           20                             43
D44V4, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) MUTATED DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                           11                             38
  CLUS_2                           22                             53
  CLUS_3                           10                             41
D44V5, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) MUTATED DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                           15                             30
  CLUS_2                            5                             41
  CLUS_3                            7                             18
  CLUS_4                           17                             43
D44V6, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) MUTATED DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                            8                             22
  CLUS_2                           12                             57
  CLUS_3                           24                             53

Clustering(45) Variable = Del Peak 24(18q23) mutation analysis
D45V1, multiclass
        clus
vv       DEL PEAK 24(18Q23) MUTATED DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                          4                           30
  CLUS_2                          9                           83
  CLUS_3                         39                           20
  CLUS_4                          0                            2
D45V2, multiclass
        clus
vv       DEL PEAK 24(18Q23) MUTATED DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                         15                           40
  CLUS_2                         25                           52
  CLUS_3                         12                           43
D45V3, multiclass
        clus
vv       DEL PEAK 24(18Q23) MUTATED DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                         15                           44
  CLUS_2                         10                           43
  CLUS_3                         24                           39
D45V4, multiclass
        clus
vv       DEL PEAK 24(18Q23) MUTATED DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                         11                           38
  CLUS_2                         27                           48
  CLUS_3                         11                           40
D45V5, multiclass
        clus
vv       DEL PEAK 24(18Q23) MUTATED DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                         17                           28
  CLUS_2                          7                           39
  CLUS_3                          7                           18
  CLUS_4                         18                           42
D45V6, multiclass
        clus
vv       DEL PEAK 24(18Q23) MUTATED DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                          8                           22
  CLUS_2                         16                           53
  CLUS_3                         25                           52

Clustering(46) Variable = Del Peak 25(21q22.2) mutation analysis
D46V1, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) MUTATED DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                            0                             34
  CLUS_2                           37                             55
  CLUS_3                           23                             36
  CLUS_4                            1                              1
D46V2, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) MUTATED DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                            4                             51
  CLUS_2                           49                             28
  CLUS_3                            8                             47
D46V3, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) MUTATED DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                            5                             54
  CLUS_2                           14                             39
  CLUS_3                           39                             24
D46V4, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) MUTATED DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                            2                             47
  CLUS_2                           46                             29
  CLUS_3                           10                             41
D46V5, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) MUTATED DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                           17                             28
  CLUS_2                           19                             27
  CLUS_3                            4                             21
  CLUS_4                           18                             42
D46V6, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) MUTATED DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                            4                             26
  CLUS_2                           32                             37
  CLUS_3                           22                             55

Clustering(47) Variable = Del Peak 26(21q22.3) mutation analysis
D47V1, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) MUTATED DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                            0                             34
  CLUS_2                           38                             54
  CLUS_3                           22                             37
  CLUS_4                            0                              2
D47V2, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) MUTATED DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                            5                             50
  CLUS_2                           48                             29
  CLUS_3                            7                             48
D47V3, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) MUTATED DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                            5                             54
  CLUS_2                           12                             41
  CLUS_3                           40                             23
D47V4, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) MUTATED DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                            2                             47
  CLUS_2                           46                             29
  CLUS_3                            9                             42
D47V5, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) MUTATED DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                           17                             28
  CLUS_2                           19                             27
  CLUS_3                            3                             22
  CLUS_4                           18                             42
D47V6, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) MUTATED DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                            3                             27
  CLUS_2                           34                             35
  CLUS_3                           20                             57
                     V1                      V2                      V3 
              "CN_CNMF"      "METHLYATION_CNMF"          "MRNASEQ_CNMF" 
                     V4                      V5                      V6 
"MRNASEQ_CHIERARCHICAL"           "MIRSEQ_CNMF"  "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
