| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/SKCM-TM/2861297/3.GDAC_CNMFselectcluster.Finished/SKCM-TM.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/SKCM-TM/2902970/3.GDAC_CNMFselectcluster.Finished/SKCM-TM.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | SKCM-TM |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/SKCM-TM/2901130/3.GDAC_CNMFselectcluster.Finished/SKCM-TM.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/SKCM-TM/2859930/3.GDAC_selectBestcluster.Finished/SKCM-TM.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/SKCM-TM/2901133/3.GDAC_CNMFselectcluster.Finished/SKCM-TM.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/SKCM-TM/2859942/3.GDAC_selectBestcluster.Finished/SKCM-TM.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/SKCM-TM/2860192/3.GDAC_CNMFselectcluster.Finished/SKCM-TM.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/SKCM-TM/2860191/3.GDAC_selectBestcluster.Finished/SKCM-TM.bestclus.txt |
| Execution Times: | |
| Submitted: | 05:54:38 09-04-13 |
| Completed: | |
| Elapsed: | 03 hrs 55 mins 15 secs |
step 1. GDAC_mergedClustering [id: 374900] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | |
| mrnahc | |
| mirnacnmf | |
| mirnahc | |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/SKCM-TM/2861297/3.GDAC_CNMFselectcluster.Finished/SKCM-TM.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/SKCM-TM/2902970/3.GDAC_CNMFselectcluster.Finished/SKCM-TM.bestclus.txt |
| mergedfile | SKCM-TM |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/SKCM-TM/2901130/3.GDAC_CNMFselectcluster.Finished/SKCM-TM.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/SKCM-TM/2859930/3.GDAC_selectBestcluster.Finished/SKCM-TM.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/SKCM-TM/2901133/3.GDAC_CNMFselectcluster.Finished/SKCM-TM.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/SKCM-TM/2859942/3.GDAC_selectBestcluster.Finished/SKCM-TM.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/SKCM-TM/2860192/3.GDAC_CNMFselectcluster.Finished/SKCM-TM.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/SKCM-TM/2860191/3.GDAC_selectBestcluster.Finished/SKCM-TM.bestclus.txt |
| Output Files: | |
| SKCM-TM.transferedmergedcluster.txt | |
| SKCM-TM.mergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 05:54:38 09-04-13 |
| Completed: | 05:55:20 09-04-13 |
| Elapsed: | 00 hrs 00 mins 42 secs |
step 2. GDAC_mergedReport [id: 374901]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | SKCM-TM.transferedmergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 05:54:38 09-04-13 |
| Completed: | 09:49:52 09-04-13 |
| Elapsed: | 03 hrs 55 mins 13 secs |