
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.48.4103/CNV2ClinicalAnalysis_nozzle_onlysig_focal.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.48.4103/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/373266/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/SKCM-TM/2844285/1.GDAC_clinicalDataPicker.Finished/SKCM-TM.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=SKCM-TM", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=SKCM-TM"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=165, in cluster file=244, common to both=158
[1]  51 158
[1] "Amp Peak  1(1p12) mutation analysis"
[1] 3
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                         47                         111 
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                         47                         111 
[1] "Amp Peak  2(1q21.3) mutation analysis"
[1] 3
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           83                            75 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           83                            75 
[1] "Amp Peak  3(1q44) mutation analysis"
[1] 3
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                         85                          73 
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                         85                          73 
[1] "Amp Peak  4(3p13) mutation analysis"
[1] 3
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                         35                         123 
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                         35                         123 
[1] "Amp Peak  5(4q12) mutation analysis"
[1] 3
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         30                         128 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         30                         128 
[1] "Amp Peak  6(5p15.33) mutation analysis"
[1] 3
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                            43                            115 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                            43                            115 
[1] "Amp Peak  7(5q35.3) mutation analysis"
[1] 3
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                           20                           138 
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                           20                           138 
[1] "Amp Peak  8(6p25.1) mutation analysis"
[1] 3
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                           95                            63 
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                           95                            63 
[1] "Amp Peak  9(6q12) mutation analysis"
[1] 3
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                         34                         124 
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                         34                         124 
[1] "Amp Peak 10(7p22.3) mutation analysis"
[1] 3
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                           88                            70 
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                           88                            70 
[1] "Amp Peak 11(7q34) mutation analysis"
[1] 3
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                         90                          68 
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                         90                          68 
[1] "Amp Peak 12(8q11.21) mutation analysis"
[1] 3
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                            64                             94 
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                            64                             94 
[1] "Amp Peak 13(8q24.21) mutation analysis"
[1] 3
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                            75                             83 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                            75                             83 
[1] "Amp Peak 14(9p24.1) mutation analysis"
[1] 3
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                           12                           146 
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                           12                           146 
[1] "Amp Peak 15(11q13.3) mutation analysis"
[1] 3
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                            23                            135 
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                            23                            135 
[1] "Amp Peak 16(11q13.4) mutation analysis"
[1] 3
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                            23                            135 
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                            23                            135 
[1] "Amp Peak 17(12q14.1) mutation analysis"
[1] 3
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                            25                            133 
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                            25                            133 
[1] "Amp Peak 18(12q15) mutation analysis"
[1] 3
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                          20                          138 
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                          20                          138 
[1] "Amp Peak 19(15q24.3) mutation analysis"
[1] 3
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                            50                            108 
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                            50                            108 
[1] "Amp Peak 20(17q25.3) mutation analysis"
[1] 3
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                            61                             97 
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                            61                             97 
[1] "Amp Peak 21(19p13.2) mutation analysis"
[1] 3
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            31                            127 
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            31                            127 
[1] "Amp Peak 22(20q13.2) mutation analysis"
[1] 3
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                            82                             76 
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                            82                             76 
[1] "Amp Peak 23(22q13.2) mutation analysis"
[1] 3
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                            74                             84 
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                            74                             84 
[1] "Amp Peak 24(Xq28) mutation analysis"
[1] 3
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                         28                         130 
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                         28                         130 
[1] "Del Peak  1(1p36.31) mutation analysis"
[1] 3
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            42                            116 
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            42                            116 
[1] "Del Peak  2(1p22.1) mutation analysis"
[1] 3
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                           41                           117 
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                           41                           117 
[1] "Del Peak  3(2q37.3) mutation analysis"
[1] 3
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                           41                           117 
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                           41                           117 
[1] "Del Peak  4(3q23) mutation analysis"
[1] 3
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                         23                         135 
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                         23                         135 
[1] "Del Peak  5(4q22.1) mutation analysis"
[1] 3
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                           31                           127 
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                           31                           127 
[1] "Del Peak  6(4q34.3) mutation analysis"
[1] 3
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                           41                           117 
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                           41                           117 
[1] "Del Peak  7(5q11.2) mutation analysis"
[1] 3
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           48                           110 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           48                           110 
[1] "Del Peak  8(5q31.3) mutation analysis"
[1] 3
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                           62                            96 
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                           62                            96 
[1] "Del Peak  9(6q26) mutation analysis"
[1] 3
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                         96                          62 
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                         96                          62 
[1] "Del Peak 10(8p23.3) mutation analysis"
[1] 3
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                           38                           120 
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                           38                           120 
[1] "Del Peak 11(9p23) mutation analysis"
[1] 3
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                        111                          47 
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                        111                          47 
[1] "Del Peak 12(9p21.3) mutation analysis"
[1] 3
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                          126                            32 
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                          126                            32 
[1] "Del Peak 13(10p15.3) mutation analysis"
[1] 3
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                            82                             76 
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                            82                             76 
[1] "Del Peak 14(10q23.31) mutation analysis"
[1] 3
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                             96                              62 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                             96                              62 
[1] "Del Peak 15(10q26.3) mutation analysis"
[1] 3
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                            96                             62 
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                            96                             62 
[1] "Del Peak 16(11q23.3) mutation analysis"
[1] 3
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                            93                             65 
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                            93                             65 
[1] "Del Peak 17(12p13.31) mutation analysis"
[1] 3
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                             21                             137 
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                             21                             137 
[1] "Del Peak 18(12q23.3) mutation analysis"
[1] 3
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                            37                            121 
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                            37                            121 
[1] "Del Peak 19(12q24.33) mutation analysis"
[1] 3
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                             37                             121 
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                             37                             121 
[1] "Del Peak 20(13q34) mutation analysis"
[1] 3
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                          39                          119 
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                          39                          119 
[1] "Del Peak 21(14q32.2) mutation analysis"
[1] 3
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                            51                            107 
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                            51                            107 
[1] "Del Peak 22(15q13.3) mutation analysis"
[1] 3
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                            39                            119 
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                            39                            119 
[1] "Del Peak 23(15q15.3) mutation analysis"
[1] 3
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                            38                            120 
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                            38                            120 
[1] "Del Peak 24(16p13.3) mutation analysis"
[1] 3
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                            29                            129 
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                            29                            129 
[1] "Del Peak 25(16q12.1) mutation analysis"
[1] 3
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                            54                            104 
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                            54                            104 
[1] "Del Peak 26(16q24.3) mutation analysis"
[1] 3
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                            56                            102 
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                            56                            102 
[1] "Del Peak 27(19p13.3) mutation analysis"
[1] 3
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                            47                            111 
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                            47                            111 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "GENDER"                                
 [7] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [8] "RADIATIONTHERAPY"                      
 [9] "RADIATIONS.RADIATION.REGIMENINDICATION"
[10] "DISTANT.METASTASIS"                    
[11] "LYMPH.NODE.METASTASIS"                 
[12] "TUMOR.STAGECODE"                       
[13] "NEOPLASM.DISEASESTAGE"                 
[14] "BATCHNUMBER"                           

Input Data has 14 rows and 158 columns.

[1] "Batch" "14"   
[1] "Last Follow UP"
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
        3687           NA         2167           NA          653         4511 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV 
        1513           82          194          345           98         1487 
TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
          NA         3564           NA         5926           NA           NA 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC 
        3265         1861           NA           NA          713           NA 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
         870           NA         6553          477           NA           NA 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
          NA           NA           NA           NA         3335         2399 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H 
          NA           NA         1455           NA         1205          979 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
          NA         1349           NA         1716         1136          440 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
        1700        10523           NA           NA           NA         2401 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
         743           NA         1787         1446         1315         9567 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
        4134         5536          686         2717         1664         1673 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
        2296         2766         3101           NA          435         1691 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
         595         2042           NA         3931           NA           NA 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
          NA           NA           NA           NA           NA           NA 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
          NA         4403         6175           NA           NA         7562 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
          NA         3150         4150         1265         1620          129 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
        3733          786          112          813           NA          714 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M 
          NA           NA           NA           NA           NA           NA 
TCGA-ER-A19N TCGA-ER-A19O TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN 
        1340           NA         2433         2443         1010         2448 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
          NA           NA           NA           NA           NA           NA 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE 
          NA           NA           NA           NA           NA         1225 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
          NA           NA           NA           NA           NA         3080 
TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
          NA           NA           NA         4525         1617           NA 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 
        1505           NA           NA         2366           NA          378 
TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-FW-A3TV TCGA-GN-A261 
        1504            6          699         1446           NA           NA 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
        3664           NA         2577           NA           NA           NA 
TCGA-GN-A26A TCGA-GN-A26D 
          NA         1204 
Variable 1:'AGE':	nDistinctValues=61,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=73,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=81,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=26,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 8:'RADIATION.THERAPY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 9:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'DISTANT.METASTASIS':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'LYMPH.NODE.METASTASIS':	nDistinctValues=10,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'TUMOR.STAGECODE':	nDistinctValues=15,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 13:'NEOPLASM.DISEASESTAGE':	nDistinctValues=12,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 14:'BATCH.NUMBER':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                   "GENDER"                "DISTANT.METASTASIS"   
[4] "LYMPH.NODE.METASTASIS" "TUMOR.STAGECODE"       "NEOPLASM.DISEASESTAGE"
[1] "TUMOR.?STAGE" "5"           
[1] "stage2"
vv
 T0  T1 T1A T1B  T2 T2A T2B  T3 T3A T3B  T4 T4A T4B TIS  TX 
  4   4  13   2  17  15   6   4  21  12   4   7  22   1   9 
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 158 columns, 1 survival variables, and 6 non-survival variables.
AGE, nv=61, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE
DISTANT.METASTASIS, nv=5, binary=FALSE, numeric=FALSE
LYMPH.NODE.METASTASIS, nv=10, binary=FALSE, numeric=FALSE
TUMOR.STAGECODE, nv=0, binary=FALSE, numeric=TRUE
NEOPLASM.DISEASESTAGE, nv=12, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1p12) mutation analysis
D1V1, survival
                             sevent
clus2                          0  1
  AMP PEAK  1(1P12) MUTATED   20 26
  AMP PEAK  1(1P12) WILD-TYPE 61 47
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                         46                         108 
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                         26                          47 
$`AMP PEAK  1(1P12) MUTATED`
TCGA-D3-A3MO TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A3F3 TCGA-EE-A181 TCGA-EE-A183 
        9.30        11.34         3.22        10.49        33.73        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29L 
        4.93       109.64        47.84        13.97        39.62         2.56 
TCGA-EE-A29M TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2GB TCGA-EE-A2GI TCGA-EE-A2GJ 
       44.35        25.87        17.92        47.54        22.55        89.33 
TCGA-EE-A2GL TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2MD TCGA-EE-A2MI TCGA-EE-A2MJ 
       55.00        13.87        14.30        47.28       204.62        96.23 
TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AD 
      167.87        43.23       103.56        53.26       122.73         3.68 
TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19L TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN 
       23.47        12.59       131.08        80.32        33.21        80.48 
TCGA-FS-A1YX TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZU TCGA-FS-A4F2 TCGA-FW-A3I3 
       48.59        32.71        23.93        26.56        50.14         0.20 
TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
      117.93        10.09        64.41        32.48 

$`AMP PEAK  1(1P12) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F5 TCGA-DA-A3F8 
       65.92        23.44        68.09        28.60       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       29.82         8.65        14.70        78.87       168.26        63.32 
TCGA-EE-A29H TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       32.19        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
      345.96        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GK TCGA-EE-A2GM 
       43.23       314.53       135.91       182.01        54.71        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       90.94       101.95        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
      129.24        28.80        19.76        61.51       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MS 
       16.96       144.76       203.01        47.54       248.61       136.44 
TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH 
       41.59         4.24        25.84        26.73        13.81       138.77 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW 
       26.37         6.41        61.05        44.05        79.99       216.92 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZJ 
       48.85        53.52        40.27        15.45         9.70        47.38 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZW 
      101.26        74.73        11.41       148.77        53.16        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 
       27.06        27.02        77.79        12.43        49.45        22.98 
TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26D 
       47.54        76.41       120.46        84.72        62.76        39.58 

  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                        0.2                         2.7 
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                     204.62                      345.96 
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                      33.47                       51.45 
[1] "0.2 - 204.6 (33.5)" "2.7 - 346.0 (51.5)"
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
[1] "hr=" "1.9"
D1V2, continuous
D1V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  1(1P12) MUTATED     16   31
  AMP PEAK  1(1P12) WILD-TYPE   46   65
        clus
vv       AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE
  FEMALE                        16                          46
  MALE                          31                          65
                             vv
clus                          M0 M1 M1A M1B M1C
  AMP PEAK  1(1P12) MUTATED   37  1   1   0   1
  AMP PEAK  1(1P12) WILD-TYPE 97  1   1   1   1
D1V4, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  1(1P12) MUTATED   24  0   5   4  0   1   1   2  3  0
  AMP PEAK  1(1P12) WILD-TYPE 63  2   2   9  1   2   9   3  9  2
D1V5, multiclass
D1V6, continuous
                             vv
clus                          STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK  1(1P12) MUTATED         4        3        5        6         1
  AMP PEAK  1(1P12) WILD-TYPE      13        6        8       12         7
                             vv
clus                          STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK  1(1P12) MUTATED           1         2         1          5
  AMP PEAK  1(1P12) WILD-TYPE         8         6         6          1
                             vv
clus                          STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  1(1P12) MUTATED            4          5        3
  AMP PEAK  1(1P12) WILD-TYPE         13         13        2
D1V7, multiclass

Clustering(2) Variable = Amp Peak  2(1q21.3) mutation analysis
D2V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  2(1Q21.3) MUTATED   45 36
  AMP PEAK  2(1Q21.3) WILD-TYPE 36 37
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           81                            73 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           36                            37 
$`AMP PEAK  2(1Q21.3) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
      121.22         9.30        21.47         2.70         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
        3.22        20.38       194.83        35.93       107.34        61.18 
TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17Z TCGA-EE-A181 
       65.92        68.09        10.49       215.44         8.65        33.73 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29D 
       14.70        26.86         4.93       109.64       168.26        13.97 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       39.62         2.56        44.35        14.47        55.89       345.96 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       78.94        24.43        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        22.55        89.33        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M7 TCGA-EE-A2MJ TCGA-EE-A2MN 
      101.95        55.59        67.13        28.80        96.23        47.54 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
       43.23       103.56       136.44        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A3PL 
       25.84         3.68        23.47        12.59        26.37        33.21 
TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1ZA 
       80.48       216.92        48.59       202.62        20.91        27.68 
TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZT 
       53.52        15.45        32.71        23.93        74.73        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FW-A3I3 TCGA-GN-A266 
       26.56        27.06        27.02        77.79         0.20        10.09 
TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        32.48        39.58 

$`AMP PEAK  2(1Q21.3) WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D9-A148 TCGA-D9-A149 TCGA-DA-A1HV TCGA-DA-A1HW 
       58.03        71.24       148.31        49.74        48.89        36.03 
TCGA-DA-A1HY TCGA-DA-A1I2 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F8 
      117.17       176.55        53.92        23.44        28.60        15.68 
TCGA-EE-A17X TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29N 
       29.82        78.87        63.32        47.84        32.19        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A5 
       56.42        37.35        25.87        17.92        46.82        39.25 
TCGA-EE-A2GC TCGA-EE-A2GK TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2M5 
       43.23        54.71        13.87        14.30        19.56        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
      129.24        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MP 
       16.96       204.62       144.76       203.01       167.87       248.61 
TCGA-EE-A3AA TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19J TCGA-ER-A19L 
        4.24        26.73        13.81       138.77         6.41       131.08 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YY TCGA-FS-A1Z4 
       61.05        44.05        79.99        80.32       228.59        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZM 
        7.76        48.85        40.27         9.70        47.38       101.26 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZW TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       11.41       148.77        49.48        50.14        12.43        49.45 
TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       22.98        47.54        76.41       120.46       117.93        84.72 
TCGA-GN-A268 
       62.76 

  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                         0.20                          4.24 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                       345.96                        248.61 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                        43.23                         48.89 
[1] "0.2 - 346.0 (43.2)" "4.2 - 248.6 (48.9)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A183                    TCGA-EE-A185 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A183                    TCGA-EE-A185 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A183                    TCGA-EE-A185 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
[1] "hr=" "1.1"
D2V2, continuous
D2V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  2(1Q21.3) MUTATED     32   51
  AMP PEAK  2(1Q21.3) WILD-TYPE   30   45
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  FEMALE                          32                            30
  MALE                            51                            45
                               vv
clus                            M0 M1 M1A M1B M1C
  AMP PEAK  2(1Q21.3) MUTATED   69  1   2   0   2
  AMP PEAK  2(1Q21.3) WILD-TYPE 65  1   0   1   0
D2V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  2(1Q21.3) MUTATED   46  0   3   8  0   3   3   4  6  2
  AMP PEAK  2(1Q21.3) WILD-TYPE 41  2   4   5  1   0   7   1  6  0
D2V5, multiclass
D2V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK  2(1Q21.3) MUTATED         7        6        8        8         4
  AMP PEAK  2(1Q21.3) WILD-TYPE      10        3        5       10         4
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK  2(1Q21.3) MUTATED           5         4         2          4
  AMP PEAK  2(1Q21.3) WILD-TYPE         4         4         5          2
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  2(1Q21.3) MUTATED           10          9        4
  AMP PEAK  2(1Q21.3) WILD-TYPE          7          9        1
D2V7, multiclass

Clustering(3) Variable = Amp Peak  3(1q44) mutation analysis
D3V1, survival
                             sevent
clus2                          0  1
  AMP PEAK  3(1Q44) MUTATED   49 34
  AMP PEAK  3(1Q44) WILD-TYPE 32 39
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                         83                          71 
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                         34                          39 
$`AMP PEAK  3(1Q44) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
      121.22         9.30        21.47         2.70         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I5 
        3.22       117.17        20.38       194.83        35.93       107.34 
TCGA-DA-A1I7 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17Z 
       61.18        65.92        68.09        10.49       215.44         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29D 
       33.73        14.70         4.93       109.64       168.26        13.97 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29T 
       39.62         2.56        44.35        56.42        14.47       345.96 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       78.94        24.43        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
      182.01        22.55        89.33        75.48        90.94       101.95 
TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M7 TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MN 
       55.59        67.13        28.80        96.23       203.01        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
      122.73        25.84         3.68        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YX TCGA-FS-A1Z0 
       26.37        80.32        33.21        80.48        48.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP 
       20.91        15.45        32.71        47.38        23.93        74.73 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4FC 
       53.16        26.56        27.06        27.02        77.79        49.45 
TCGA-FW-A3I3 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
        0.20        10.09        64.41        32.48        39.58 

$`AMP PEAK  3(1Q44) WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D9-A148 TCGA-D9-A149 TCGA-DA-A1HV TCGA-DA-A1HW 
       58.03        71.24       148.31        49.74        48.89        36.03 
TCGA-DA-A1I2 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X 
      176.55        53.92        23.44        28.60        15.68        29.82 
TCGA-EE-A183 TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29N 
       26.86        78.87        63.32        47.84        32.19        18.58 
TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A5 
       37.35        55.89        25.87        17.92        46.82        39.25 
TCGA-EE-A2GC TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT 
       43.23        54.71        55.00        13.87        14.30        19.56 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       21.67       129.24        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A3AA 
      103.17        16.96       204.62       144.76       167.87         4.24 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
       26.73        13.81         6.41       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
       79.99       216.92       228.59        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZM TCGA-FS-A1ZR 
       48.85        53.52        40.27         9.70       101.26        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZW TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FW-A3R5 TCGA-FW-A3TU 
      148.77        49.48        50.14        12.43        22.98        47.54 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        62.76 

  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                       0.20                        4.24 
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                     345.96                      228.59 
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                      47.54                       47.84 
[1] "0.2 - 346.0 (47.5)" "4.2 - 228.6 (47.8)"
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
[1] "hr=" "1.4"
D3V2, continuous
D3V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  3(1Q44) MUTATED     35   50
  AMP PEAK  3(1Q44) WILD-TYPE   27   46
        clus
vv       AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE
  FEMALE                        35                          27
  MALE                          50                          46
                             vv
clus                          M0 M1 M1A M1B M1C
  AMP PEAK  3(1Q44) MUTATED   71  1   2   0   2
  AMP PEAK  3(1Q44) WILD-TYPE 63  1   0   1   0
D3V4, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  3(1Q44) MUTATED   47  0   4   8  0   3   3   3  7  2
  AMP PEAK  3(1Q44) WILD-TYPE 40  2   3   5  1   0   7   2  5  0
D3V5, multiclass
D3V6, continuous
                             vv
clus                          STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK  3(1Q44) MUTATED         8        6        7       10         2
  AMP PEAK  3(1Q44) WILD-TYPE       9        3        6        8         6
                             vv
clus                          STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK  3(1Q44) MUTATED           5         5         2          5
  AMP PEAK  3(1Q44) WILD-TYPE         4         3         5          1
                             vv
clus                          STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  3(1Q44) MUTATED            9         10        4
  AMP PEAK  3(1Q44) WILD-TYPE          8          8        1
D3V7, multiclass

Clustering(4) Variable = Amp Peak  4(3p13) mutation analysis
D4V1, survival
                             sevent
clus2                          0  1
  AMP PEAK  4(3P13) MUTATED   21 14
  AMP PEAK  4(3P13) WILD-TYPE 60 59
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                         35                         119 
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                         14                          59 
$`AMP PEAK  4(3P13) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MV TCGA-DA-A1HW TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1IA 
       71.24        21.47        36.03        35.93       107.34        65.92 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29H TCGA-EE-A29L 
      215.44        15.68       109.64        78.87        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GN 
       44.35        14.47       345.96       182.01        22.55        90.94 
TCGA-EE-A2GP TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2MP TCGA-EE-A2MU TCGA-EE-A3AE 
       13.87        21.67       129.24       248.61        53.26        26.73 
TCGA-ER-A19M TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FS-A1Z0 TCGA-FS-A1ZA TCGA-FS-A1ZK 
       61.05        80.32        33.21       202.62        27.68        23.93 
TCGA-FS-A4F2 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 
       50.14       117.93        84.72        10.09        62.76 

$`AMP PEAK  4(3P13) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW 
      121.22        58.03         9.30       148.31        49.74         2.70 
TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 
        6.38        11.34         3.22        48.89       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A1IC 
      194.83       176.55        61.18        53.92        23.44        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
       28.60        10.49        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
       26.86         4.93       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V 
       39.62        18.58        56.42        37.35        55.89        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GJ TCGA-EE-A2GK 
       47.54        43.23       314.53       135.91        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        75.48       101.95        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       67.13        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
      167.87        47.54        43.23       103.56       136.44        41.59 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24       122.73        25.84         3.68        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 
       79.99        80.48       216.92        48.59       228.59        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
       28.08         7.76        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
        9.70        32.71        47.38       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU 
       77.79        12.43        49.45         0.20        22.98        47.54 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       76.41       120.46        64.41        32.48        39.58 

  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                       2.56                        0.20 
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                     345.96                      314.53 
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                      53.26                       47.54 
[1] "2.6 - 346.0 (53.3)" "0.2 - 314.5 (47.5)"
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
[1] "hr=" "1.5"
D4V2, continuous
D4V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  4(3P13) MUTATED     17   18
  AMP PEAK  4(3P13) WILD-TYPE   45   78
        clus
vv       AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE
  FEMALE                        17                          45
  MALE                          18                          78
                             vv
clus                           M0  M1 M1A M1B M1C
  AMP PEAK  4(3P13) MUTATED    30   0   1   0   1
  AMP PEAK  4(3P13) WILD-TYPE 104   2   1   1   1
D4V4, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  4(3P13) MUTATED   20  0   2   3  0   1   2   1  2  1
  AMP PEAK  4(3P13) WILD-TYPE 67  2   5  10  1   2   8   4 10  1
D4V5, multiclass
D4V6, continuous
                             vv
clus                          STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK  4(3P13) MUTATED         4        5        2        3         1
  AMP PEAK  4(3P13) WILD-TYPE      13        4       11       15         7
                             vv
clus                          STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK  4(3P13) MUTATED           1         2         0          1
  AMP PEAK  4(3P13) WILD-TYPE         8         6         7          5
                             vv
clus                          STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  4(3P13) MUTATED            7          3        2
  AMP PEAK  4(3P13) WILD-TYPE         10         15        3
D4V7, multiclass

Clustering(5) Variable = Amp Peak  5(4q12) mutation analysis
D5V1, survival
                             sevent
clus2                          0  1
  AMP PEAK  5(4Q12) MUTATED   18 12
  AMP PEAK  5(4Q12) WILD-TYPE 63 61
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         30                         124 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         12                          61 
$`AMP PEAK  5(4Q12) MUTATED`
TCGA-D3-A3C6 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I1 TCGA-DA-A1IB 
       58.03         3.22        48.89        36.03       194.83        23.44 
TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A20F TCGA-EE-A29D TCGA-EE-A29P TCGA-EE-A2GB 
      215.44        33.73        78.87        13.97        56.42        47.54 
TCGA-EE-A2GI TCGA-EE-A2GP TCGA-EE-A2MJ TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A3AA 
       22.55        13.87        96.23       248.61       103.56         4.24 
TCGA-EE-A3AD TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YX TCGA-FS-A1ZJ 
        3.68        80.32        33.21        80.48        48.59        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZU TCGA-GN-A264 TCGA-GN-A268 TCGA-GN-A26D 
       23.93       101.26        26.56       117.93        62.76        39.58 

$`AMP PEAK  5(4Q12) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
      121.22        71.24         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 
        2.70         6.38        11.34       117.17        20.38       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC 
       35.93       107.34        61.18        53.92        65.92        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 
       28.60        10.49        15.68        29.82         8.65        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
       26.86         4.93       109.64       168.26        63.32        47.84 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q 
       39.62        32.19         2.56        44.35        18.58        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GD 
       78.94        24.43        39.25        58.75        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      135.91       182.01        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
       90.94       101.95        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML 
      103.27       103.17        16.96       204.62       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      167.87        47.54        43.23       136.44        41.59        53.26 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73        25.84        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
       12.59        26.37         6.41       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
       79.99       216.92       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
        9.70        32.71        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 
       49.48        27.06        27.02        77.79        50.14        12.43 
TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 
       49.45         0.20        22.98        47.54        76.41       120.46 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
       84.72        10.09        64.41        32.48 

  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                       3.22                        0.20 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                     248.61                      345.96 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                     48.065                      47.540 
[1] "3.2 - 248.6 (48.1)" "0.2 - 346.0 (47.5)"
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
[1] "hr=" "1.3"
D5V2, continuous
D5V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  5(4Q12) MUTATED     13   17
  AMP PEAK  5(4Q12) WILD-TYPE   49   79
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  FEMALE                        13                          49
  MALE                          17                          79
                             vv
clus                           M0  M1 M1A M1B M1C
  AMP PEAK  5(4Q12) MUTATED    25   0   1   0   0
  AMP PEAK  5(4Q12) WILD-TYPE 109   2   1   1   2
D5V4, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  5(4Q12) MUTATED   16  0   3   3  0   0   2   1  2  0
  AMP PEAK  5(4Q12) WILD-TYPE 71  2   4  10  1   3   8   4 10  2
D5V5, multiclass
D5V6, continuous
                             vv
clus                          STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK  5(4Q12) MUTATED         4        1        2        4         0
  AMP PEAK  5(4Q12) WILD-TYPE      13        8       11       14         8
                             vv
clus                          STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK  5(4Q12) MUTATED           1         3         1          2
  AMP PEAK  5(4Q12) WILD-TYPE         8         5         6          4
                             vv
clus                          STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  5(4Q12) MUTATED            4          4        1
  AMP PEAK  5(4Q12) WILD-TYPE         13         14        4
D5V7, multiclass

Clustering(6) Variable = Amp Peak  6(5p15.33) mutation analysis
D6V1, survival
                                sevent
clus2                             0  1
  AMP PEAK  6(5P15.33) MUTATED   26 15
  AMP PEAK  6(5P15.33) WILD-TYPE 55 58
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                            41                            113 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                            15                             58 
$`AMP PEAK  6(5P15.33) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D9-A148 TCGA-D9-A1JW TCGA-DA-A1HV TCGA-DA-A1I2 
       58.03        71.24       148.31         2.70        48.89       176.55 
TCGA-DA-A1I5 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A20B TCGA-EE-A20H 
      107.34        10.49       215.44        33.73       109.64       168.26 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29M TCGA-EE-A29T TCGA-EE-A2A0 TCGA-EE-A2GM 
       13.97        39.62        44.35       345.96        46.82        75.48 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A3AA TCGA-EE-A3AB 
      129.24        28.80       248.61       136.44         4.24       122.73 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19M TCGA-ER-A19N 
        3.68        26.73        23.47       138.77        61.05        44.05 
TCGA-ER-A3PL TCGA-FS-A1YX TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZK TCGA-FS-A1ZY 
       33.21        48.59        40.27         9.70        23.93        27.06 
TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A26D 
        0.20        47.54       117.93        84.72        39.58 

$`AMP PEAK  6(5P15.33) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z1 
      121.22         9.30        21.47        49.74         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I4 
        3.22        36.03       117.17        20.38       194.83        35.93 
TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
       61.18        53.92        65.92        23.44        68.09        28.60 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N 
       78.87        63.32        47.84        32.19         2.56        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X 
       56.42        37.35        14.47        55.89        25.87        17.92 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       78.94        24.43        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       19.56        67.13        21.67        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT 
      203.01       167.87        47.54        43.23       103.56        41.59 
TCGA-EE-A2MU TCGA-EE-A3AC TCGA-EE-A3AF TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       53.26        25.84        13.81        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY 
      131.08        79.99        80.32        80.48       216.92       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP 
       53.52        15.45        32.71        47.38       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZZ 
       11.41       148.77        53.16        26.56        49.48        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 
       77.79        50.14        12.43        49.45        22.98        76.41 
TCGA-GN-A262 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      120.46        10.09        64.41        62.76        32.48 

  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                          0.20                           2.56 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                        345.96                         314.53 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                         47.54                          47.54 
[1] "0.2 - 346.0 (47.5)" "2.6 - 314.5 (47.5)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
[1] "hr=" "1.7"
D6V2, continuous
D6V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  6(5P15.33) MUTATED     17   26
  AMP PEAK  6(5P15.33) WILD-TYPE   45   70
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  FEMALE                           17                             45
  MALE                             26                             70
                                vv
clus                              M0  M1 M1A M1B M1C
  AMP PEAK  6(5P15.33) MUTATED    29   1   1   1   1
  AMP PEAK  6(5P15.33) WILD-TYPE 105   1   1   0   1
D6V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  6(5P15.33) MUTATED   23  0   0   3  0   1   4   0  2  1
  AMP PEAK  6(5P15.33) WILD-TYPE 64  2   7  10  1   2   6   5 10  1
D6V5, multiclass
D6V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK  6(5P15.33) MUTATED         4        1        3        6         1
  AMP PEAK  6(5P15.33) WILD-TYPE      13        8       10       12         7
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK  6(5P15.33) MUTATED           1         4         0          0
  AMP PEAK  6(5P15.33) WILD-TYPE         8         4         7          6
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  6(5P15.33) MUTATED            4          4        3
  AMP PEAK  6(5P15.33) WILD-TYPE         13         14        2
D6V7, multiclass

Clustering(7) Variable = Amp Peak  7(5q35.3) mutation analysis
D7V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  7(5Q35.3) MUTATED   12  8
  AMP PEAK  7(5Q35.3) WILD-TYPE 69 65
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                           20                           134 
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                            8                            65 
$`AMP PEAK  7(5Q35.3) MUTATED`
TCGA-D9-A148 TCGA-D9-A1JW TCGA-DA-A1IA TCGA-EE-A182 TCGA-EE-A20H TCGA-EE-A29H 
      148.31         2.70        65.92        14.70       168.26        32.19 
TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2GJ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-ER-A19F 
       14.47       345.96        89.33       136.44        41.59        26.37 
TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FS-A1YX TCGA-FS-A1ZD TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       80.32        33.21        48.59        53.52        47.38        23.93 
TCGA-FW-A3I3 TCGA-FW-A3TU 
        0.20        47.54 

$`AMP PEAK  7(5Q35.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 
      121.22        58.03        71.24         9.30        21.47        49.74 
TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
        6.38        11.34         3.22        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       53.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        33.73        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
      109.64        78.87        63.32        47.84        13.97        39.62 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S 
        2.56        44.35        18.58        56.42        37.35        55.89 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       22.55        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MU 
      167.87        47.54       248.61        43.23       103.56        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M 
       23.47       138.77        12.59         6.41       131.08        61.05 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 
       44.05        79.99        80.48       216.92       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE 
       20.91        28.08         7.76        27.68        48.85        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       15.45         9.70        32.71       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 
       77.79        50.14        12.43        49.45        22.98        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                         0.20                          2.56 
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                       345.96                        314.53 
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                        47.46                         47.69 
[1] "0.2 - 346.0 (47.5)" "2.6 - 314.5 (47.7)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK  7(5Q35.3) MUTATED"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "AMP PEAK  7(5Q35.3) MUTATED"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK  7(5Q35.3) MUTATED"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "AMP PEAK  7(5Q35.3) MUTATED"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK  7(5Q35.3) MUTATED"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "AMP PEAK  7(5Q35.3) MUTATED"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
[1] "hr=" "1.2"
D7V2, continuous
D7V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  7(5Q35.3) MUTATED     10   10
  AMP PEAK  7(5Q35.3) WILD-TYPE   52   86
        clus
vv       AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE
  FEMALE                          10                            52
  MALE                            10                            86
                               vv
clus                             M0  M1 M1A M1B M1C
  AMP PEAK  7(5Q35.3) MUTATED    16   1   1   1   0
  AMP PEAK  7(5Q35.3) WILD-TYPE 118   1   1   0   2
D7V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  7(5Q35.3) MUTATED   12  0   1   3  0   1   0   0  1  1
  AMP PEAK  7(5Q35.3) WILD-TYPE 75  2   6  10  1   2  10   5 11  1
D7V5, multiclass
D7V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK  7(5Q35.3) MUTATED         3        2        1        2         1
  AMP PEAK  7(5Q35.3) WILD-TYPE      14        7       12       16         7
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK  7(5Q35.3) MUTATED           0         0         0          1
  AMP PEAK  7(5Q35.3) WILD-TYPE         9         8         7          5
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  7(5Q35.3) MUTATED            1          2        2
  AMP PEAK  7(5Q35.3) WILD-TYPE         16         16        3
D7V7, multiclass

Clustering(8) Variable = Amp Peak  8(6p25.1) mutation analysis
D8V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  8(6P25.1) MUTATED   41 52
  AMP PEAK  8(6P25.1) WILD-TYPE 40 21
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                           93                            61 
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                           52                            21 
$`AMP PEAK  8(6P25.1) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-DA-A1HV TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
        2.70        48.89        20.38       194.83       176.55        35.93 
TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 
       65.92        68.09        10.49         8.65        33.73        26.86 
TCGA-EE-A185 TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29L TCGA-EE-A29P 
        4.93       168.26        63.32        13.97         2.56        56.42 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GD 
       14.47        55.89        25.87        39.25        47.54       314.53 
TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR 
      182.01        89.33        55.00        90.94        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2MD 
       55.59        19.56        67.13       129.24        28.80        47.28 
TCGA-EE-A2ME TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MN 
      103.27       204.62        96.23       144.76       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AD 
      248.61        43.23       136.44        53.26         4.24         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       26.73        13.81        23.47        12.59        26.37         6.41 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX 
       61.05        44.05        80.32        33.21       216.92        48.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZE TCGA-FS-A1ZG 
      202.62        20.91        28.08        27.68        40.27         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F2 
       53.16        26.56        49.48        27.06        27.02        50.14 
TCGA-FS-A4F9 TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 
       12.43         0.20        47.54       117.93        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

$`AMP PEAK  8(6P25.1) WILD-TYPE`
TCGA-D3-A3MO TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1HY 
        9.30         6.38        11.34         3.22        36.03       117.17 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F5 
      107.34        61.18        53.92        23.44        28.60       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29C 
       15.68        29.82        14.70       109.64        78.87        47.84 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29T 
       39.62        32.19        44.35        18.58        37.35       345.96 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GC 
       17.92        46.82        78.94        24.43        58.75        43.23 
TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2M5 
      135.91        22.55        54.71        75.48       101.95        21.67 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2ML TCGA-EE-A2MR 
       19.76        61.51       103.17        16.96       203.01       103.56 
TCGA-EE-A2MT TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AH TCGA-ER-A19L TCGA-ER-A1A1 
       41.59       122.73        25.84       138.77       131.08        79.99 
TCGA-FR-A3YN TCGA-FS-A1YY TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZF 
       80.48       228.59         7.76        48.85        53.52        15.45 
TCGA-FS-A1ZS TCGA-FS-A4F0 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 
      148.77        77.79        49.45        22.98        76.41       120.46 
TCGA-GN-A265 
       84.72 

  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                         0.20                          3.22 
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                       314.53                        345.96 
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                        47.38                         49.45 
[1] "0.2 - 314.5 (47.4)" "3.2 - 346.0 (49.5)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
[1] "hr=" "1.8"
D8V2, continuous
D8V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  8(6P25.1) MUTATED     38   57
  AMP PEAK  8(6P25.1) WILD-TYPE   24   39
        clus
vv       AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE
  FEMALE                          38                            24
  MALE                            57                            39
                               vv
clus                            M0 M1 M1A M1B M1C
  AMP PEAK  8(6P25.1) MUTATED   78  2   2   1   1
  AMP PEAK  8(6P25.1) WILD-TYPE 56  0   0   0   1
D8V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  8(6P25.1) MUTATED   52  0   7   7  0   3   5   4  7  0
  AMP PEAK  8(6P25.1) WILD-TYPE 35  2   0   6  1   0   5   1  5  2
D8V5, multiclass
D8V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK  8(6P25.1) MUTATED        11        5        7       10         4
  AMP PEAK  8(6P25.1) WILD-TYPE       6        4        6        8         4
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK  8(6P25.1) MUTATED           6         6         2          6
  AMP PEAK  8(6P25.1) WILD-TYPE         3         2         5          0
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  8(6P25.1) MUTATED           10         10        4
  AMP PEAK  8(6P25.1) WILD-TYPE          7          8        1
D8V7, multiclass

Clustering(9) Variable = Amp Peak  9(6q12) mutation analysis
D9V1, survival
                             sevent
clus2                          0  1
  AMP PEAK  9(6Q12) MUTATED   20 14
  AMP PEAK  9(6Q12) WILD-TYPE 61 59
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                         34                         120 
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                         14                          59 
$`AMP PEAK  9(6Q12) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D9-A149 TCGA-D9-A1JW TCGA-DA-A1HV TCGA-DA-A1I1 
      121.22        71.24        49.74         2.70        48.89       194.83 
TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A2GB TCGA-EE-A2GH TCGA-EE-A2GN 
       33.73        26.86       109.64        47.54       182.01        90.94 
TCGA-EE-A2GT TCGA-EE-A2M7 TCGA-EE-A2ME TCGA-EE-A2MI TCGA-EE-A2MN TCGA-EE-A2MT 
       19.56        28.80       103.27       204.62        47.54        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AE TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19M 
       53.26         4.24        26.73        23.47        12.59        61.05 
TCGA-ER-A19N TCGA-ER-A3ET TCGA-FS-A1Z0 TCGA-FS-A1ZA TCGA-FS-A1ZW TCGA-FW-A3TU 
       44.05        80.32       202.62        27.68        49.48        47.54 
TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      117.93        10.09        64.41        62.76 

$`AMP PEAK  9(6Q12) WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z1 
       58.03         9.30        21.47       148.31         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 
        3.22        36.03       117.17        20.38       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC 
      107.34        61.18        53.92        65.92        23.44        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       28.60        10.49       215.44        15.68        29.82         8.65 
TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
       14.70         4.93        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
       43.23       314.53       135.91        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        75.48       101.95        13.87        14.30        55.59 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       67.13        21.67       129.24        19.76        61.51        47.28 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.17        16.96        96.23       144.76       203.01       167.87 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A3AB TCGA-EE-A3AC 
      248.61        43.23       103.56       136.44       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
        3.68        13.81       138.77        26.37         6.41       131.08 
TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       79.99        33.21        80.48       216.92        48.59       228.59 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       20.91        28.08         7.76        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY 
       74.73        11.41       148.77        53.16        26.56        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 
       27.02        77.79        50.14        12.43        49.45         0.20 
TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A26A TCGA-GN-A26D 
       22.98        76.41       120.46        84.72        32.48        39.58 

  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                        2.7                         0.2 
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                     204.62                      345.96 
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                     49.185                      47.050 
[1] "2.7 - 204.6 (49.2)" "0.2 - 346.0 (47.0)"
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
[1] "hr=" "1.3"
D9V2, continuous
D9V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  9(6Q12) MUTATED     13   21
  AMP PEAK  9(6Q12) WILD-TYPE   49   75
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  FEMALE                        13                          49
  MALE                          21                          75
                             vv
clus                           M0  M1 M1A M1B M1C
  AMP PEAK  9(6Q12) MUTATED    28   0   0   0   0
  AMP PEAK  9(6Q12) WILD-TYPE 106   2   2   1   2
D9V4, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  9(6Q12) MUTATED   19  0   4   1  0   1   1   1  1  0
  AMP PEAK  9(6Q12) WILD-TYPE 68  2   3  12  1   2   9   4 11  2
D9V5, multiclass
D9V6, continuous
                             vv
clus                          STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK  9(6Q12) MUTATED         4        3        4        3         2
  AMP PEAK  9(6Q12) WILD-TYPE      13        6        9       15         6
                             vv
clus                          STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK  9(6Q12) MUTATED           2         1         0          3
  AMP PEAK  9(6Q12) WILD-TYPE         7         7         7          3
                             vv
clus                          STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  9(6Q12) MUTATED            3          1        0
  AMP PEAK  9(6Q12) WILD-TYPE         14         17        5
D9V7, multiclass

Clustering(10) Variable = Amp Peak 10(7p22.3) mutation analysis
D10V1, survival
                               sevent
clus2                            0  1
  AMP PEAK 10(7P22.3) MUTATED   42 43
  AMP PEAK 10(7P22.3) WILD-TYPE 39 30
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                           85                            69 
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                           43                            30 
$`AMP PEAK 10(7P22.3) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z3 
       71.24         9.30       148.31        49.74         6.38         3.22 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 
       48.89        36.03       117.17        20.38       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-EE-A17Z 
      107.34        61.18        53.92        65.92        68.09         8.65 
TCGA-EE-A181 TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       33.73       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29T 
       32.19         2.56        18.58        56.42        37.35       345.96 
TCGA-EE-A2A0 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       46.82        58.75        47.54       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       89.33        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM 
       21.67       129.24        28.80        96.23       144.76       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU 
       47.54       248.61        43.23       103.56       136.44        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24       122.73         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19J TCGA-ER-A19M TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW 
      138.77         6.41        61.05        33.21        80.48       216.92 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZH 
       20.91        28.08         7.76        53.52        40.27        32.71 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F2 
       23.93       101.26        11.41        27.06        27.02        50.14 
TCGA-FW-A3I3 TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
        0.20       117.93        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

$`AMP PEAK 10(7P22.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A3Z1 TCGA-DA-A1I1 
      121.22        58.03        21.47         2.70        11.34       194.83 
TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       23.44        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29M 
       14.70        26.86         4.93       109.64        78.87        44.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A1 TCGA-EE-A2A2 
       14.47        55.89        25.87        17.92        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GK TCGA-EE-A2GR TCGA-EE-A2GS 
       39.25        43.23       314.53        54.71        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       19.56        67.13        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2ML TCGA-EE-A2MT TCGA-EE-A3AC 
      103.17        16.96       204.62       203.01        41.59        25.84 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       12.59        26.37       131.08        44.05        79.99        80.32 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZF 
       48.59       228.59       202.62        27.68        48.85        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZP TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
        9.70        47.38        74.73       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU 
       49.48        77.79        12.43        49.45        22.98        47.54 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 
       76.41       120.46        84.72 

  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                          0.2                           2.7 
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                       345.96                        314.53 
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                        47.84                         47.38 
[1] "0.2 - 346.0 (47.8)" "2.7 - 314.5 (47.4)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
[1] "hr=" "1.2"
D10V2, continuous
D10V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 10(7P22.3) MUTATED     31   57
  AMP PEAK 10(7P22.3) WILD-TYPE   31   39
        clus
vv       AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE
  FEMALE                          31                            31
  MALE                            57                            39
                               vv
clus                            M0 M1 M1A M1B M1C
  AMP PEAK 10(7P22.3) MUTATED   70  2   2   1   2
  AMP PEAK 10(7P22.3) WILD-TYPE 64  0   0   0   0
D10V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 10(7P22.3) MUTATED   48  0   5   8  0   1   4   4  6  2
  AMP PEAK 10(7P22.3) WILD-TYPE 39  2   2   5  1   2   6   1  6  0
D10V5, multiclass
D10V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 10(7P22.3) MUTATED        10        6        4        9         4
  AMP PEAK 10(7P22.3) WILD-TYPE       7        3        9        9         4
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 10(7P22.3) MUTATED           5         6         2          5
  AMP PEAK 10(7P22.3) WILD-TYPE         4         2         5          1
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 10(7P22.3) MUTATED           10          7        5
  AMP PEAK 10(7P22.3) WILD-TYPE          7         11        0
D10V7, multiclass

Clustering(11) Variable = Amp Peak 11(7q34) mutation analysis
D11V1, survival
                             sevent
clus2                          0  1
  AMP PEAK 11(7Q34) MUTATED   46 41
  AMP PEAK 11(7Q34) WILD-TYPE 35 32
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                         87                          67 
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                         41                          32 
$`AMP PEAK 11(7Q34) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW 
       71.24         9.30        21.47       148.31        49.74         2.70 
TCGA-D9-A1JX TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        6.38         3.22        48.89        36.03       117.17        20.38 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IC TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       68.09       215.44        15.68        33.73        14.70        26.86 
TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H 
      109.64       168.26        63.32        47.84        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29T TCGA-EE-A2A0 
        2.56        44.35        18.58        56.42       345.96        46.82 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GL 
       58.75        47.54       135.91       182.01        22.55        55.00 
TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GT TCGA-EE-A2M6 TCGA-EE-A2M7 
       75.48       101.95        13.87        19.56       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MQ TCGA-EE-A2MR 
       19.76        16.96        96.23       144.76        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AE TCGA-EE-A3AF 
      136.44        53.26         4.24       122.73        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19J TCGA-ER-A19M TCGA-ER-A3ET TCGA-ER-A3PL 
       23.47       138.77         6.41        61.05        80.32        33.21 
TCGA-FR-A3YN TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z7 TCGA-FS-A1ZD TCGA-FS-A1ZF 
       80.48        48.59       202.62         7.76        53.52        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZZ 
        9.70        32.71       101.26        11.41       148.77        27.02 
TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       50.14         0.20       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

$`AMP PEAK 11(7Q34) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D9-A3Z1 TCGA-DA-A1I1 TCGA-DA-A1IB TCGA-DA-A3F2 
      121.22        58.03        11.34       194.83        23.44        28.60 
TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A29D 
       10.49        29.82         8.65         4.93        78.87        13.97 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A1 
       37.35        14.47        55.89        25.87        17.92        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GJ TCGA-EE-A2GK 
       24.43        39.25        43.23       314.53        89.33        54.71 
TCGA-EE-A2GN TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2MC 
       90.94        14.30        55.59        67.13        21.67        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2ML TCGA-EE-A2MM 
       47.28       103.27       103.17       204.62       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MT TCGA-EE-A3AC TCGA-EE-A3AD TCGA-ER-A19D 
       47.54       248.61        41.59        25.84         3.68        12.59 
TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YY 
       26.37       131.08        44.05        79.99       216.92       228.59 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZJ 
       20.91        28.08        27.68        48.85        40.27        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       23.93        74.73        53.16        26.56        49.48        27.06 
TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       77.79        12.43        49.45        22.98        47.54        76.41 
TCGA-GN-A262 
      120.46 

  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                       0.20                        3.68 
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                     345.96                      314.53 
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                      48.59                       47.38 
[1] "0.2 - 346.0 (48.6)" "3.7 - 314.5 (47.4)"
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
[1] "hr=" "1.1"
D11V2, continuous
D11V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 11(7Q34) MUTATED     37   53
  AMP PEAK 11(7Q34) WILD-TYPE   25   43
        clus
vv       AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE
  FEMALE                        37                          25
  MALE                          53                          43
                             vv
clus                          M0 M1 M1A M1B M1C
  AMP PEAK 11(7Q34) MUTATED   73  2   2   1   2
  AMP PEAK 11(7Q34) WILD-TYPE 61  0   0   0   0
D11V4, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 11(7Q34) MUTATED   44  1   6   8  0   3   6   4  7  2
  AMP PEAK 11(7Q34) WILD-TYPE 43  1   1   5  1   0   4   1  5  0
D11V5, multiclass
D11V6, continuous
                             vv
clus                          STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 11(7Q34) MUTATED         7        6        4       11         4
  AMP PEAK 11(7Q34) WILD-TYPE      10        3        9        7         4
                             vv
clus                          STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 11(7Q34) MUTATED           2         6         3          6
  AMP PEAK 11(7Q34) WILD-TYPE         7         2         4          0
                             vv
clus                          STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 11(7Q34) MUTATED           12          9        5
  AMP PEAK 11(7Q34) WILD-TYPE          5          9        0
D11V7, multiclass

Clustering(12) Variable = Amp Peak 12(8q11.21) mutation analysis
D12V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 12(8Q11.21) MUTATED   31 30
  AMP PEAK 12(8Q11.21) WILD-TYPE 50 43
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                            61                             93 
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                            30                             43 
$`AMP PEAK 12(8Q11.21) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 
       58.03        71.24        21.47        36.03       117.17       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A3F5 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A20B 
      176.55        35.93       215.44         8.65        33.73       109.64 
TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A5 
       47.84        39.62        14.47       345.96        25.87        39.25 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      314.53       135.91       182.01        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MH 
      101.95        13.87       129.24        28.80        19.76        16.96 
TCGA-EE-A2MN TCGA-EE-A2MR TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG 
       47.54       103.56       122.73         3.68        26.73        23.47 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET TCGA-FS-A1YX 
        6.41       131.08        61.05        44.05        80.32        48.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZD TCGA-FS-A1ZK TCGA-FS-A1ZM 
      202.62        28.08         7.76        53.52        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY 
       74.73        11.41       148.77        53.16        26.56        27.06 
TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26A 
       50.14         0.20       117.93        84.72        64.41        32.48 
TCGA-GN-A26D 
       39.58 

$`AMP PEAK 12(8Q11.21) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
      121.22         9.30       148.31        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1I0 TCGA-DA-A1I5 TCGA-DA-A1I7 
       11.34         3.22        48.89        20.38       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F 
       15.68        29.82        14.70        26.86         4.93        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
      168.26        63.32        13.97        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29X TCGA-EE-A2A0 
       18.58        56.42        37.35        55.89        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GI 
       78.94        24.43        58.75        47.54        43.23        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
       89.33        54.71        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MI 
       21.67        61.51        47.28       103.27       103.17       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A2MQ 
       96.23       144.76       203.01       167.87       248.61        43.23 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AF 
      136.44        41.59        53.26         4.24        25.84        13.81 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN 
      138.77        12.59        26.37        79.99        33.21        80.48 
TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE 
      216.92       228.59        20.91        27.68        48.85        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZW TCGA-FS-A1ZZ 
       15.45         9.70        32.71        47.38        49.48        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       77.79        12.43        49.45        22.98        47.54        76.41 
TCGA-GN-A262 TCGA-GN-A266 TCGA-GN-A268 
      120.46        10.09        62.76 

  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                          0.20                           2.56 
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                        345.96                         248.61 
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                         50.14                          47.28 
[1] "0.2 - 346.0 (50.1)" "2.6 - 248.6 (47.3)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
[1] "hr=" "1.1"
D12V2, continuous
D12V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 12(8Q11.21) MUTATED     23   41
  AMP PEAK 12(8Q11.21) WILD-TYPE   39   55
        clus
vv       AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE
  FEMALE                           23                             39
  MALE                             41                             55
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 12(8Q11.21) MUTATED   52  2   0   0   0
  AMP PEAK 12(8Q11.21) WILD-TYPE 82  0   2   1   2
D12V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 12(8Q11.21) MUTATED   34  1   4   6  0   1   3   1  4  1
  AMP PEAK 12(8Q11.21) WILD-TYPE 53  1   3   7  1   2   7   4  8  1
D12V5, multiclass
D12V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 12(8Q11.21) MUTATED         7        2        4        9         3
  AMP PEAK 12(8Q11.21) WILD-TYPE      10        7        9        9         5
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 12(8Q11.21) MUTATED           3         5         4          3
  AMP PEAK 12(8Q11.21) WILD-TYPE         6         3         3          3
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 12(8Q11.21) MUTATED            5          7        2
  AMP PEAK 12(8Q11.21) WILD-TYPE         12         11        3
D12V7, multiclass

Clustering(13) Variable = Amp Peak 13(8q24.21) mutation analysis
D13V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 13(8Q24.21) MUTATED   35 36
  AMP PEAK 13(8Q24.21) WILD-TYPE 46 37
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                            71                             83 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                            36                             37 
$`AMP PEAK 13(8Q24.21) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW TCGA-DA-A1HW 
       58.03        71.24         9.30        21.47         2.70        36.03 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A3F3 
      117.17        20.38       194.83       176.55        35.93        10.49 
TCGA-DA-A3F5 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A20B TCGA-EE-A29C TCGA-EE-A29E 
      215.44         8.65        33.73       109.64        47.84        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       32.19         2.56        14.47        55.89       345.96        25.87 
TCGA-EE-A2A5 TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GL TCGA-EE-A2GM 
       39.25       314.53       135.91       182.01        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2M6 TCGA-EE-A2M7 
       90.94       101.95        13.87        55.59       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR 
       19.76        16.96        96.23        47.54       248.61       103.56 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-ER-A19J TCGA-ER-A19L 
      122.73         3.68        26.73        23.47         6.41       131.08 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       61.05        44.05        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZD TCGA-FS-A1ZK TCGA-FS-A1ZM 
      202.62        28.08         7.76        53.52        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY 
       74.73        11.41       148.77        53.16        26.56        27.06 
TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       50.14         0.20        64.41        32.48        39.58 

$`AMP PEAK 13(8Q24.21) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 
      121.22       148.31        49.74         6.38        11.34         3.22 
TCGA-DA-A1HV TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       48.89       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 
       68.09        28.60        15.68        29.82        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29M 
        4.93        78.87       168.26        63.32        13.97        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       18.58        56.42        37.35        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GI TCGA-EE-A2GJ 
       24.43        58.75        47.54        43.23        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2MC 
       54.71        14.30        19.56        67.13        21.67        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML 
       47.28       103.27       103.17       204.62       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      167.87        43.23       136.44        41.59        53.26         4.24 
TCGA-EE-A3AC TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A1A1 
       25.84        13.81       138.77        12.59        26.37        79.99 
TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1Z3 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE 
       33.21        80.48        20.91        27.68        48.85        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZW TCGA-FS-A1ZZ 
       15.45         9.70        32.71        47.38        49.48        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       77.79        12.43        49.45        22.98        47.54        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        62.76 

  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                          0.20                           3.22 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                        345.96                         204.62 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                         48.59                          47.38 
[1] "0.2 - 346.0 (48.6)" "3.2 - 204.6 (47.4)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
[1] "hr=" "1.1"
D13V2, continuous
D13V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 13(8Q24.21) MUTATED     27   48
  AMP PEAK 13(8Q24.21) WILD-TYPE   35   48
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  FEMALE                           27                             35
  MALE                             48                             48
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 13(8Q24.21) MUTATED   64  2   1   0   0
  AMP PEAK 13(8Q24.21) WILD-TYPE 70  0   1   1   2
D13V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 13(8Q24.21) MUTATED   41  1   4   7  0   2   4   2  6  1
  AMP PEAK 13(8Q24.21) WILD-TYPE 46  1   3   6  1   1   6   3  6  1
D13V5, multiclass
D13V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 13(8Q24.21) MUTATED         8        3        6       10         5
  AMP PEAK 13(8Q24.21) WILD-TYPE       9        6        7        8         3
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 13(8Q24.21) MUTATED           3         5         5          3
  AMP PEAK 13(8Q24.21) WILD-TYPE         6         3         2          3
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 13(8Q24.21) MUTATED            7          9        2
  AMP PEAK 13(8Q24.21) WILD-TYPE         10          9        3
D13V7, multiclass

Clustering(14) Variable = Amp Peak 14(9p24.1) mutation analysis
D14V1, survival
                               sevent
clus2                            0  1
  AMP PEAK 14(9P24.1) MUTATED    5  7
  AMP PEAK 14(9P24.1) WILD-TYPE 76 66
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                           12                           142 
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                            7                            66 
$`AMP PEAK 14(9P24.1) MUTATED`
TCGA-DA-A1I5 TCGA-DA-A3F3 TCGA-EE-A29A TCGA-EE-A2M5 TCGA-EE-A2MU TCGA-ER-A19M 
      107.34        10.49        63.32        21.67        53.26        61.05 
TCGA-ER-A3ET TCGA-FS-A1Z0 TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FW-A3I3 TCGA-GN-A262 
       80.32       202.62        47.38        23.93         0.20       120.46 

$`AMP PEAK 14(9P24.1) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV 
       49.74         2.70         6.38        11.34         3.22        48.89 
TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
       36.03       117.17        20.38       194.83       176.55        35.93 
TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
       61.18        53.92        65.92        23.44        68.09        28.60 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29C 
       26.86         4.93       109.64        78.87       168.26        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
       13.87        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX 
       44.05        79.99        33.21        80.48       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      228.59        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZM 
       53.52        40.27        15.45         9.70        32.71       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       27.06        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
       22.98        47.54        76.41       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                         0.20                          2.56 
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                       202.62                        345.96 
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                       57.155                        47.540 
[1] "0.2 - 202.6 (57.2)" "2.6 - 346.0 (47.5)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
[1] "hr=" "1.2"
D14V2, continuous
D14V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 14(9P24.1) MUTATED      6    6
  AMP PEAK 14(9P24.1) WILD-TYPE   56   90
        clus
vv       AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE
  FEMALE                           6                            56
  MALE                             6                            90
                               vv
clus                             M0  M1 M1A M1B M1C
  AMP PEAK 14(9P24.1) MUTATED     9   1   0   0   1
  AMP PEAK 14(9P24.1) WILD-TYPE 125   1   2   1   1
D14V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 14(9P24.1) MUTATED    8  0   2   0  0   0   1   0  0  0
  AMP PEAK 14(9P24.1) WILD-TYPE 79  2   5  13  1   3   9   5 12  2
D14V5, multiclass
D14V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 14(9P24.1) MUTATED         2        2        1        1         0
  AMP PEAK 14(9P24.1) WILD-TYPE      15        7       12       17         8
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 14(9P24.1) MUTATED           0         0         0          2
  AMP PEAK 14(9P24.1) WILD-TYPE         9         8         7          4
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 14(9P24.1) MUTATED            1          0        2
  AMP PEAK 14(9P24.1) WILD-TYPE         16         18        3
D14V7, multiclass

Clustering(15) Variable = Amp Peak 15(11q13.3) mutation analysis
D15V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 15(11Q13.3) MUTATED   10 13
  AMP PEAK 15(11Q13.3) WILD-TYPE 71 60
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                            23                            131 
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                            13                             60 
$`AMP PEAK 15(11Q13.3) MUTATED`
TCGA-D9-A3Z3 TCGA-DA-A3F3 TCGA-EE-A20F TCGA-EE-A2GB TCGA-EE-A2GH TCGA-EE-A2GP 
        3.22        10.49        78.87        47.54       182.01        13.87 
TCGA-EE-A2GR TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2MM TCGA-ER-A19M TCGA-ER-A19N 
       14.30        21.67        61.51       167.87        61.05        44.05 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZK TCGA-FS-A1ZS 
       80.32       216.92        48.85        53.52        23.93       148.77 
TCGA-FS-A1ZT TCGA-FS-A4F2 TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26D 
       53.16        50.14        10.09        62.76        39.58 

$`AMP PEAK 15(11Q13.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HW 
       49.74         2.70         6.38        11.34        48.89        36.03 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 
      117.17        20.38       194.83       176.55        35.93       107.34 
TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
       61.18        53.92        65.92        23.44        68.09        28.60 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
       26.86         4.93       109.64       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
       43.23       314.53       135.91        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        75.48        90.94       101.95        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2ME 
       67.13       129.24        28.80        19.76        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YX TCGA-FS-A1YY 
      131.08        79.99        33.21        80.48        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZE 
      202.62        20.91        28.08         7.76        27.68        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        47.38       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 
       11.41        26.56        49.48        27.06        27.02        77.79 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       12.43        49.45         0.20        22.98        47.54        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26A 
      120.46       117.93        84.72        64.41        32.48 

  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                          3.22                           0.20 
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                        216.92                         345.96 
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                         50.14                          47.38 
[1] "3.2 - 216.9 (50.1)" "0.2 - 346.0 (47.4)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
[1] "hr=" "1.2"
D15V2, continuous
D15V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 15(11Q13.3) MUTATED      5   18
  AMP PEAK 15(11Q13.3) WILD-TYPE   57   78
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  FEMALE                            5                             57
  MALE                             18                             78
                                vv
clus                              M0  M1 M1A M1B M1C
  AMP PEAK 15(11Q13.3) MUTATED    20   0   0   0   0
  AMP PEAK 15(11Q13.3) WILD-TYPE 114   2   2   1   2
D15V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 15(11Q13.3) MUTATED   15  0   3   2  0   0   1   0  0  0
  AMP PEAK 15(11Q13.3) WILD-TYPE 72  2   4  11  1   3   9   5 12  2
D15V5, multiclass
D15V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 15(11Q13.3) MUTATED         4        0        2        5         1
  AMP PEAK 15(11Q13.3) WILD-TYPE      13        9       11       13         7
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 15(11Q13.3) MUTATED           1         2         1          2
  AMP PEAK 15(11Q13.3) WILD-TYPE         8         6         6          4
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 15(11Q13.3) MUTATED            3          0        0
  AMP PEAK 15(11Q13.3) WILD-TYPE         14         18        5
D15V7, multiclass

Clustering(16) Variable = Amp Peak 16(11q13.4) mutation analysis
D16V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 16(11Q13.4) MUTATED   10 13
  AMP PEAK 16(11Q13.4) WILD-TYPE 71 60
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                            23                            131 
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                            13                             60 
$`AMP PEAK 16(11Q13.4) MUTATED`
TCGA-D9-A3Z3 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GH TCGA-EE-A2GP TCGA-EE-A2M5 
        3.22        47.54        43.23       182.01        13.87        21.67 
TCGA-EE-A2MC TCGA-EE-A2MM TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET 
       61.51       167.87       131.08        61.05        44.05        80.32 
TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZK TCGA-FS-A1ZS 
       33.21       216.92        48.85        53.52        23.93       148.77 
TCGA-FS-A1ZT TCGA-FS-A4F2 TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26D 
       53.16        50.14        10.09        62.76        39.58 

$`AMP PEAK 16(11Q13.4) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HW 
       49.74         2.70         6.38        11.34        48.89        36.03 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 
      117.17        20.38       194.83       176.55        35.93       107.34 
TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
       61.18        53.92        65.92        23.44        68.09        28.60 
TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 
       10.49       215.44        15.68        29.82         8.65        33.73 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H 
       14.70        26.86         4.93       109.64        78.87       168.26 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
       63.32        47.84        13.97        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ 
       39.25        58.75       314.53       135.91        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR 
       54.71        55.00        75.48        90.94       101.95        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        19.56        67.13       129.24        28.80        19.76 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      144.76       203.01        47.54       248.61        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      136.44        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A1A1 TCGA-FR-A3YN TCGA-FS-A1YX TCGA-FS-A1YY 
       26.37         6.41        79.99        80.48        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZE 
      202.62        20.91        28.08         7.76        27.68        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        47.38       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 
       11.41        26.56        49.48        27.06        27.02        77.79 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       12.43        49.45         0.20        22.98        47.54        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26A 
      120.46       117.93        84.72        64.41        32.48 

  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                          3.22                           0.20 
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                        216.92                         345.96 
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                         50.14                          47.38 
[1] "3.2 - 216.9 (50.1)" "0.2 - 346.0 (47.4)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
[1] "hr=" "1.1"
D16V2, continuous
D16V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 16(11Q13.4) MUTATED      5   18
  AMP PEAK 16(11Q13.4) WILD-TYPE   57   78
        clus
vv       AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE
  FEMALE                            5                             57
  MALE                             18                             78
                                vv
clus                              M0  M1 M1A M1B M1C
  AMP PEAK 16(11Q13.4) MUTATED    18   0   1   0   0
  AMP PEAK 16(11Q13.4) WILD-TYPE 116   2   1   1   2
D16V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 16(11Q13.4) MUTATED   15  0   3   2  0   0   0   0  0  0
  AMP PEAK 16(11Q13.4) WILD-TYPE 72  2   4  11  1   3  10   5 12  2
D16V5, multiclass
D16V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 16(11Q13.4) MUTATED         4        0        2        3         1
  AMP PEAK 16(11Q13.4) WILD-TYPE      13        9       11       15         7
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 16(11Q13.4) MUTATED           2         2         1          2
  AMP PEAK 16(11Q13.4) WILD-TYPE         7         6         6          4
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 16(11Q13.4) MUTATED            2          0        1
  AMP PEAK 16(11Q13.4) WILD-TYPE         15         18        4
D16V7, multiclass

Clustering(17) Variable = Amp Peak 17(12q14.1) mutation analysis
D17V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 17(12Q14.1) MUTATED   13 12
  AMP PEAK 17(12Q14.1) WILD-TYPE 68 61
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                            25                            129 
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                            12                             61 
$`AMP PEAK 17(12Q14.1) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A3F5 
       58.03        71.24        21.47        48.89        36.03       215.44 
TCGA-EE-A17Z TCGA-EE-A29D TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GH TCGA-EE-A2M5 
        8.65        13.97        58.75        47.54       182.01        21.67 
TCGA-EE-A2MS TCGA-ER-A19M TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FS-A1ZE TCGA-FS-A1ZF 
      136.44        61.05        80.32        33.21        40.27        15.45 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-GN-A264 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       23.93       101.26       117.93        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

$`AMP PEAK 17(12Q14.1) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
      121.22         9.30       148.31        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 
       11.34         3.22       117.17        20.38       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A181 
       68.09        28.60        10.49        15.68        29.82        33.73 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H 
       14.70        26.86         4.93       109.64        78.87       168.26 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       63.32        47.84        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
       43.23       314.53       135.91        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       55.00        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        19.56        67.13       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
       43.23       103.56        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.48       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZG 
       28.08         7.76        27.68        48.85        53.52         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       32.71        47.38        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 
       26.56        49.48        27.06        27.02        77.79        50.14 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       12.43        49.45         0.20        22.98        47.54        76.41 
TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A266 
      120.46        84.72        10.09 

  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                          8.65                           0.20 
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                        215.44                         345.96 
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                         48.89                          47.54 
[1] "8.7 - 215.4 (48.9)" "0.2 - 346.0 (47.5)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
[1] "hr=" "1"  
D17V2, continuous
D17V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 17(12Q14.1) MUTATED     10   15
  AMP PEAK 17(12Q14.1) WILD-TYPE   52   81
        clus
vv       AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE
  FEMALE                           10                             52
  MALE                             15                             81
                                vv
clus                              M0  M1 M1A M1B M1C
  AMP PEAK 17(12Q14.1) MUTATED    22   0   1   0   0
  AMP PEAK 17(12Q14.1) WILD-TYPE 112   2   1   1   2
D17V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 17(12Q14.1) MUTATED   14  0   4   2  0   1   1   1  1  0
  AMP PEAK 17(12Q14.1) WILD-TYPE 73  2   3  11  1   2   9   4 11  2
D17V5, multiclass
D17V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 17(12Q14.1) MUTATED         2        1        2        2         0
  AMP PEAK 17(12Q14.1) WILD-TYPE      15        8       11       16         8
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 17(12Q14.1) MUTATED           2         4         1          4
  AMP PEAK 17(12Q14.1) WILD-TYPE         7         4         6          2
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 17(12Q14.1) MUTATED            3          2        1
  AMP PEAK 17(12Q14.1) WILD-TYPE         14         16        4
D17V7, multiclass

Clustering(18) Variable = Amp Peak 18(12q15) mutation analysis
D18V1, survival
                              sevent
clus2                           0  1
  AMP PEAK 18(12Q15) MUTATED   11  8
  AMP PEAK 18(12Q15) WILD-TYPE 70 65
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                          19                          135 
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                           8                           65 
$`AMP PEAK 18(12Q15) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A3F5 
       58.03        71.24        21.47        48.89        36.03       215.44 
TCGA-EE-A29D TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GH TCGA-EE-A2M5 TCGA-EE-A2MS 
       13.97        58.75        47.54       182.01        21.67       136.44 
TCGA-ER-A3ET TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       80.32        23.93       101.26        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

$`AMP PEAK 18(12Q15) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
      121.22         9.30       148.31        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 
       11.34         3.22       117.17        20.38       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       68.09        28.60        10.49        15.68        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
       33.73        14.70        26.86         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
      168.26        63.32        47.84        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ 
       39.25        43.23       314.53       135.91        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M 
      138.77        12.59        26.37         6.41       131.08        61.05 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX 
       44.05        79.99        33.21        80.48       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
       47.38        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 
       49.48        27.06        27.02        77.79        50.14        12.43 
TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 
       49.45         0.20        22.98        47.54        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
      117.93        84.72        10.09 

  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                       13.97                         0.20 
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                      215.44                       345.96 
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                       58.03                        47.38 
[1] "14.0 - 215.4 (58.0)" "0.2 - 346.0 (47.4)" 
                  TCGA-D3-A1Q7                   TCGA-D3-A3C6 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A3CC                   TCGA-D3-A3MO 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A3MV                   TCGA-D9-A148 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A149                   TCGA-D9-A1JW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A1JX                   TCGA-D9-A3Z1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A3Z3                   TCGA-DA-A1HV 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-DA-A1HW                   TCGA-DA-A1HY 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I0                   TCGA-DA-A1I1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I2                   TCGA-DA-A1I4 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I5                   TCGA-DA-A1I7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I8                   TCGA-DA-A1IA 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1IB                   TCGA-DA-A1IC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A3F2                   TCGA-DA-A3F3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A3F5                   TCGA-DA-A3F8 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A17X                   TCGA-EE-A17Z 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A181                   TCGA-EE-A182 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A183                   TCGA-EE-A185 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A20B                   TCGA-EE-A20F 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A20H                   TCGA-EE-A29A 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29C                   TCGA-EE-A29D 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A29E                   TCGA-EE-A29H 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29L                   TCGA-EE-A29M 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29N                   TCGA-EE-A29P 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29Q                   TCGA-EE-A29R 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29S                   TCGA-EE-A29T 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29V                   TCGA-EE-A29X 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A0                   TCGA-EE-A2A1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A2                   TCGA-EE-A2A5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A6                   TCGA-EE-A2GB 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2GC                   TCGA-EE-A2GD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GE                   TCGA-EE-A2GH 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2GI                   TCGA-EE-A2GJ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GK                   TCGA-EE-A2GL 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GM                   TCGA-EE-A2GN 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GO                   TCGA-EE-A2GP 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GR                   TCGA-EE-A2GS 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GT                   TCGA-EE-A2GU 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2M5                   TCGA-EE-A2M6 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2M7                   TCGA-EE-A2M8 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MC                   TCGA-EE-A2MD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2ME                   TCGA-EE-A2MG 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MH                   TCGA-EE-A2MI 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MJ                   TCGA-EE-A2MK 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2ML                   TCGA-EE-A2MM 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MN                   TCGA-EE-A2MP 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MQ                   TCGA-EE-A2MR 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MS                   TCGA-EE-A2MT 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MU                   TCGA-EE-A3AA 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AB                   TCGA-EE-A3AC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AD                   TCGA-EE-A3AE 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AF                   TCGA-EE-A3AG 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AH                   TCGA-ER-A19D 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19F                   TCGA-ER-A19J 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19L                   TCGA-ER-A19M 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19N                   TCGA-ER-A1A1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A3ET                   TCGA-ER-A3PL 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FR-A3YN                   TCGA-FS-A1YW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZD                   TCGA-FS-A1ZE 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZF                   TCGA-FS-A1ZG 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZH                   TCGA-FS-A1ZJ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZK                   TCGA-FS-A1ZM 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-FS-A1ZP                   TCGA-FS-A1ZR 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A267                   TCGA-GN-A268 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A1Q7                   TCGA-D3-A3C6 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A3CC                   TCGA-D3-A3MO 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A3MV                   TCGA-D9-A148 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A149                   TCGA-D9-A1JW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A1JX                   TCGA-D9-A3Z1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A3Z3                   TCGA-DA-A1HV 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-DA-A1HW                   TCGA-DA-A1HY 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I0                   TCGA-DA-A1I1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I2                   TCGA-DA-A1I4 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I5                   TCGA-DA-A1I7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I8                   TCGA-DA-A1IA 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1IB                   TCGA-DA-A1IC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A3F2                   TCGA-DA-A3F3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A3F5                   TCGA-DA-A3F8 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A17X                   TCGA-EE-A17Z 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A181                   TCGA-EE-A182 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A183                   TCGA-EE-A185 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A20B                   TCGA-EE-A20F 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A20H                   TCGA-EE-A29A 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29C                   TCGA-EE-A29D 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A29E                   TCGA-EE-A29H 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29L                   TCGA-EE-A29M 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29N                   TCGA-EE-A29P 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29Q                   TCGA-EE-A29R 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29S                   TCGA-EE-A29T 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29V                   TCGA-EE-A29X 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A0                   TCGA-EE-A2A1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A2                   TCGA-EE-A2A5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A6                   TCGA-EE-A2GB 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2GC                   TCGA-EE-A2GD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GE                   TCGA-EE-A2GH 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2GI                   TCGA-EE-A2GJ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GK                   TCGA-EE-A2GL 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GM                   TCGA-EE-A2GN 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GO                   TCGA-EE-A2GP 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GR                   TCGA-EE-A2GS 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GT                   TCGA-EE-A2GU 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2M5                   TCGA-EE-A2M6 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2M7                   TCGA-EE-A2M8 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MC                   TCGA-EE-A2MD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2ME                   TCGA-EE-A2MG 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MH                   TCGA-EE-A2MI 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MJ                   TCGA-EE-A2MK 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2ML                   TCGA-EE-A2MM 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MN                   TCGA-EE-A2MP 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MQ                   TCGA-EE-A2MR 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MS                   TCGA-EE-A2MT 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MU                   TCGA-EE-A3AA 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AB                   TCGA-EE-A3AC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AD                   TCGA-EE-A3AE 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AF                   TCGA-EE-A3AG 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AH                   TCGA-ER-A19D 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19F                   TCGA-ER-A19J 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19L                   TCGA-ER-A19M 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19N                   TCGA-ER-A1A1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A3ET                   TCGA-ER-A3PL 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FR-A3YN                   TCGA-FS-A1YW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZD                   TCGA-FS-A1ZE 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZF                   TCGA-FS-A1ZG 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZH                   TCGA-FS-A1ZJ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZK                   TCGA-FS-A1ZM 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-FS-A1ZP                   TCGA-FS-A1ZR 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A267                   TCGA-GN-A268 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A1Q7                   TCGA-D3-A3C6 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A3CC                   TCGA-D3-A3MO 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A3MV                   TCGA-D9-A148 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A149                   TCGA-D9-A1JW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A1JX                   TCGA-D9-A3Z1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A3Z3                   TCGA-DA-A1HV 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-DA-A1HW                   TCGA-DA-A1HY 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I0                   TCGA-DA-A1I1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I2                   TCGA-DA-A1I4 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I5                   TCGA-DA-A1I7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I8                   TCGA-DA-A1IA 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1IB                   TCGA-DA-A1IC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A3F2                   TCGA-DA-A3F3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A3F5                   TCGA-DA-A3F8 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A17X                   TCGA-EE-A17Z 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A181                   TCGA-EE-A182 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A183                   TCGA-EE-A185 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A20B                   TCGA-EE-A20F 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A20H                   TCGA-EE-A29A 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29C                   TCGA-EE-A29D 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A29E                   TCGA-EE-A29H 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29L                   TCGA-EE-A29M 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29N                   TCGA-EE-A29P 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29Q                   TCGA-EE-A29R 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29S                   TCGA-EE-A29T 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29V                   TCGA-EE-A29X 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A0                   TCGA-EE-A2A1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A2                   TCGA-EE-A2A5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A6                   TCGA-EE-A2GB 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2GC                   TCGA-EE-A2GD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GE                   TCGA-EE-A2GH 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2GI                   TCGA-EE-A2GJ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GK                   TCGA-EE-A2GL 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GM                   TCGA-EE-A2GN 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GO                   TCGA-EE-A2GP 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GR                   TCGA-EE-A2GS 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GT                   TCGA-EE-A2GU 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2M5                   TCGA-EE-A2M6 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2M7                   TCGA-EE-A2M8 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MC                   TCGA-EE-A2MD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2ME                   TCGA-EE-A2MG 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MH                   TCGA-EE-A2MI 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MJ                   TCGA-EE-A2MK 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2ML                   TCGA-EE-A2MM 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MN                   TCGA-EE-A2MP 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MQ                   TCGA-EE-A2MR 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MS                   TCGA-EE-A2MT 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MU                   TCGA-EE-A3AA 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AB                   TCGA-EE-A3AC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AD                   TCGA-EE-A3AE 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AF                   TCGA-EE-A3AG 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AH                   TCGA-ER-A19D 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19F                   TCGA-ER-A19J 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19L                   TCGA-ER-A19M 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19N                   TCGA-ER-A1A1 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A3ET                   TCGA-ER-A3PL 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FR-A3YN                   TCGA-FS-A1YW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZD                   TCGA-FS-A1ZE 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZF                   TCGA-FS-A1ZG 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZH                   TCGA-FS-A1ZJ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZK                   TCGA-FS-A1ZM 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-FS-A1ZP                   TCGA-FS-A1ZR 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A267                   TCGA-GN-A268 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
[1] "hr=" "1.3"
D18V2, continuous
D18V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 18(12Q15) MUTATED      9   11
  AMP PEAK 18(12Q15) WILD-TYPE   53   85
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  FEMALE                          9                           53
  MALE                           11                           85
                              vv
clus                            M0  M1 M1A M1B M1C
  AMP PEAK 18(12Q15) MUTATED    18   0   0   0   0
  AMP PEAK 18(12Q15) WILD-TYPE 116   2   2   1   2
D18V4, multiclass
                              vv
clus                           N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 18(12Q15) MUTATED    9  0   4   2  0   1   1   1  1  0
  AMP PEAK 18(12Q15) WILD-TYPE 78  2   3  11  1   2   9   4 11  2
D18V5, multiclass
D18V6, continuous
                              vv
clus                           STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 18(12Q15) MUTATED         2        1        1        2         0
  AMP PEAK 18(12Q15) WILD-TYPE      15        8       12       16         8
                              vv
clus                           STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 18(12Q15) MUTATED           1         2         1          4
  AMP PEAK 18(12Q15) WILD-TYPE         8         6         6          2
                              vv
clus                           STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 18(12Q15) MUTATED            3          2        0
  AMP PEAK 18(12Q15) WILD-TYPE         14         16        5
D18V7, multiclass

Clustering(19) Variable = Amp Peak 19(15q24.3) mutation analysis
D19V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 19(15Q24.3) MUTATED   24 24
  AMP PEAK 19(15Q24.3) WILD-TYPE 57 49
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                            48                            106 
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                            24                             49 
$`AMP PEAK 19(15Q24.3) MUTATED`
TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I7 
       21.47       148.31        49.74        48.89        36.03        61.18 
TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A20F TCGA-EE-A20H 
       10.49       215.44        33.73        26.86        78.87       168.26 
TCGA-EE-A29D TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A1 TCGA-EE-A2GH TCGA-EE-A2GI 
       13.97       345.96        17.92        78.94       182.01        22.55 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 
       75.48        90.94       101.95        67.13       129.24        28.80 
TCGA-EE-A2MD TCGA-EE-A2MJ TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS 
       47.28        96.23        47.54       248.61        43.23       136.44 
TCGA-EE-A3AB TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19M 
      122.73        26.73        13.81        23.47        12.59        61.05 
TCGA-ER-A3ET TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZD TCGA-FS-A1ZP TCGA-FS-A1ZY 
       80.32        20.91         7.76        53.52        74.73        27.06 
TCGA-FS-A4F2 TCGA-FW-A3R5 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26A 
       50.14        22.98       117.93        84.72        64.41        32.48 

$`AMP PEAK 19(15Q24.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A1JW TCGA-D9-A1JX 
      121.22        58.03        71.24         9.30         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 
       11.34         3.22       117.17        20.38       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC 
       35.93       107.34        53.92        65.92        23.44        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A185 
       28.60        15.68        29.82         8.65        14.70         4.93 
TCGA-EE-A20B TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
      109.64        63.32        47.84        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       25.87        46.82        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
       43.23       314.53       135.91        89.33        54.71        55.00 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2M8 
       13.87        14.30        55.59        19.56        21.67        19.76 
TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK 
       61.51       103.27       103.17        16.96       204.62       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      203.01       167.87       103.56        41.59        53.26         4.24 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       25.84         3.68       138.77        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX 
       44.05        79.99        33.21        80.48       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE 
      228.59       202.62        28.08        27.68        48.85        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZZ 
       11.41       148.77        53.16        26.56        49.48        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A261 
       77.79        12.43        49.45         0.20        47.54        76.41 
TCGA-GN-A262 TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26D 
      120.46        10.09        62.76        39.58 

  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                          7.76                           0.20 
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                        345.96                         314.53 
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                        51.830                         45.585 
[1] "7.8 - 346.0 (51.8)" "0.2 - 314.5 (45.6)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
[1] "hr=" "1.1"
D19V2, continuous
D19V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 19(15Q24.3) MUTATED     19   31
  AMP PEAK 19(15Q24.3) WILD-TYPE   43   65
        clus
vv       AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE
  FEMALE                           19                             43
  MALE                             31                             65
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 19(15Q24.3) MUTATED   41  0   0   1   0
  AMP PEAK 19(15Q24.3) WILD-TYPE 93  2   2   0   2
D19V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 19(15Q24.3) MUTATED   26  0   3   4  1   2   3   0  2  1
  AMP PEAK 19(15Q24.3) WILD-TYPE 61  2   4   9  0   1   7   5 10  1
D19V5, multiclass
D19V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 19(15Q24.3) MUTATED         6        3        4        8         2
  AMP PEAK 19(15Q24.3) WILD-TYPE      11        6        9       10         6
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 19(15Q24.3) MUTATED           1         2         1          4
  AMP PEAK 19(15Q24.3) WILD-TYPE         8         6         6          2
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 19(15Q24.3) MUTATED            5          3        0
  AMP PEAK 19(15Q24.3) WILD-TYPE         12         15        5
D19V7, multiclass

Clustering(20) Variable = Amp Peak 20(17q25.3) mutation analysis
D20V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 20(17Q25.3) MUTATED   35 25
  AMP PEAK 20(17Q25.3) WILD-TYPE 46 48
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                            60                             94 
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                            25                             48 
$`AMP PEAK 20(17Q25.3) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JW TCGA-DA-A1HV 
       71.24         9.30        21.47       148.31         2.70        48.89 
TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I7 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 
      117.17       194.83        61.18        65.92        68.09        10.49 
TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H 
      215.44        33.73        14.70         4.93        78.87       168.26 
TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29R 
       13.97        32.19         2.56        18.58        56.42        14.47 
TCGA-EE-A29V TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GH TCGA-EE-A2GI 
       25.87        58.75        47.54        43.23       182.01        22.55 
TCGA-EE-A2GM TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2M7 TCGA-EE-A2MD TCGA-EE-A2MH 
       75.48        13.87        14.30        28.80        47.28        16.96 
TCGA-EE-A2MI TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
      204.62        47.54       248.61       103.56       136.44        41.59 
TCGA-EE-A3AC TCGA-EE-A3AE TCGA-ER-A19F TCGA-ER-A19N TCGA-ER-A3ET TCGA-ER-A3PL 
       25.84        26.73        26.37        44.05        80.32        33.21 
TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1ZD TCGA-FS-A1ZK TCGA-FS-A1ZM 
       80.48       216.92        48.59        53.52        23.93       101.26 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FW-A3I3 TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26D 
       53.16        26.56         0.20        84.72        62.76        39.58 

$`AMP PEAK 20(17Q25.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 
      121.22        58.03        49.74         6.38        11.34         3.22 
TCGA-DA-A1HW TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 
       36.03        20.38       176.55        35.93       107.34        53.92 
TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A183 
       23.44        28.60        15.68        29.82         8.65        26.86 
TCGA-EE-A20B TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29M TCGA-EE-A29Q 
      109.64        63.32        47.84        39.62        44.35        37.35 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
       55.89       345.96        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
       39.25       314.53       135.91        89.33        54.71        55.00 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       90.94       101.95        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MJ 
      129.24        19.76        61.51       103.27       103.17        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MU TCGA-EE-A3AA 
      144.76       203.01       167.87        43.23        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
      122.73         3.68        13.81        23.47       138.77        12.59 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A1A1 TCGA-FS-A1YY TCGA-FS-A1Z0 
        6.41       131.08        61.05        79.99       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE 
       20.91        28.08         7.76        27.68        48.85        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZP TCGA-FS-A1ZR 
       15.45         9.70        32.71        47.38        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 
      148.77        49.48        27.06        27.02        77.79        50.14 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 
       12.43        49.45        22.98        47.54        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
      117.93        10.09        64.41        32.48 

  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                          0.20                           3.22 
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                        248.61                         345.96 
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                        47.410                         48.345 
[1] "0.2 - 248.6 (47.4)" "3.2 - 346.0 (48.3)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
[1] "hr=" "1.2"
D20V2, continuous
D20V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 20(17Q25.3) MUTATED     19   42
  AMP PEAK 20(17Q25.3) WILD-TYPE   43   54
        clus
vv       AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE
  FEMALE                           19                             43
  MALE                             42                             54
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 20(17Q25.3) MUTATED   53  1   1   1   0
  AMP PEAK 20(17Q25.3) WILD-TYPE 81  1   1   0   2
D20V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 20(17Q25.3) MUTATED   34  0   3   6  0   2   3   3  6  0
  AMP PEAK 20(17Q25.3) WILD-TYPE 53  2   4   7  1   1   7   2  6  2
D20V5, multiclass
D20V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 20(17Q25.3) MUTATED         6        4        3        8         1
  AMP PEAK 20(17Q25.3) WILD-TYPE      11        5       10       10         7
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 20(17Q25.3) MUTATED           3         5         3          2
  AMP PEAK 20(17Q25.3) WILD-TYPE         6         3         4          4
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 20(17Q25.3) MUTATED            7          9        2
  AMP PEAK 20(17Q25.3) WILD-TYPE         10          9        3
D20V7, multiclass

Clustering(21) Variable = Amp Peak 21(19p13.2) mutation analysis
D21V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 21(19P13.2) MUTATED   15 15
  AMP PEAK 21(19P13.2) WILD-TYPE 66 58
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            30                            124 
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            15                             58 
$`AMP PEAK 21(19P13.2) MUTATED`
TCGA-D3-A3MV TCGA-DA-A1I0 TCGA-DA-A1IC TCGA-DA-A3F5 TCGA-EE-A29E TCGA-EE-A29L 
       21.47        20.38        68.09       215.44        39.62         2.56 
TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A2GH TCGA-EE-A2GO TCGA-EE-A2M6 TCGA-EE-A2M7 
       56.42        14.47       182.01       101.95       129.24        28.80 
TCGA-EE-A2MG TCGA-EE-A2MM TCGA-EE-A2MR TCGA-ER-A19J TCGA-ER-A3ET TCGA-ER-A3PL 
      103.17       167.87       103.56         6.41        80.32        33.21 
TCGA-FR-A3YN TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZD TCGA-FS-A1ZJ 
       80.48       228.59        20.91         7.76        53.52        47.38 
TCGA-FS-A1ZM TCGA-FS-A1ZS TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A266 TCGA-GN-A267 
      101.26       148.77        50.14         0.20        10.09        64.41 

$`AMP PEAK 21(19P13.2) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW 
        2.70         6.38        11.34         3.22        48.89        36.03 
TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
      117.17       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 
       53.92        65.92        23.44        28.60        10.49        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T 
       32.19        44.35        18.58        37.35        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI 
       58.75        47.54        43.23       314.53       135.91        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP 
       89.33        54.71        55.00        75.48        90.94        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M8 
       14.30        55.59        19.56        67.13        21.67        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       61.51        47.28       103.27        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS 
      144.76       203.01        47.54       248.61        43.23       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
       26.73        13.81        23.47       138.77        12.59        26.37 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        61.05        44.05        79.99       216.92        48.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZF 
      202.62        28.08        27.68        48.85        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZT 
        9.70        32.71        23.93        74.73        11.41        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 
       26.56        49.48        27.06        27.02        77.79        12.43 
TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       49.45        22.98        47.54        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        62.76        32.48        39.58 

  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                           0.2                            2.7 
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                        228.59                         345.96 
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                         54.97                          47.41 
[1] "0.2 - 228.6 (55.0)" "2.7 - 346.0 (47.4)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
[1] "hr=" "1.1"
D21V2, continuous
D21V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 21(19P13.2) MUTATED     11   20
  AMP PEAK 21(19P13.2) WILD-TYPE   51   76
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  FEMALE                           11                             51
  MALE                             20                             76
                                vv
clus                              M0  M1 M1A M1B M1C
  AMP PEAK 21(19P13.2) MUTATED    24   2   2   0   0
  AMP PEAK 21(19P13.2) WILD-TYPE 110   0   0   1   2
D21V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 21(19P13.2) MUTATED   16  0   2   3  0   1   0   2  4  0
  AMP PEAK 21(19P13.2) WILD-TYPE 71  2   5  10  1   2  10   3  8  2
D21V5, multiclass
D21V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 21(19P13.2) MUTATED         6        0        1        3         2
  AMP PEAK 21(19P13.2) WILD-TYPE      11        9       12       15         6
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 21(19P13.2) MUTATED           0         2         1          2
  AMP PEAK 21(19P13.2) WILD-TYPE         9         6         6          4
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 21(19P13.2) MUTATED            3          5        3
  AMP PEAK 21(19P13.2) WILD-TYPE         14         13        2
D21V7, multiclass

Clustering(22) Variable = Amp Peak 22(20q13.2) mutation analysis
D22V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 22(20Q13.2) MUTATED   43 37
  AMP PEAK 22(20Q13.2) WILD-TYPE 38 36
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                            80                             74 
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                            37                             36 
$`AMP PEAK 22(20Q13.2) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z3 
       58.03        71.24        21.47       148.31         6.38         3.22 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I7 
       48.89        36.03        20.38       194.83       176.55        61.18 
TCGA-DA-A1IA TCGA-DA-A3F5 TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A 
       65.92       215.44        26.86       109.64       168.26        63.32 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29T 
       13.97        39.62         2.56        56.42        14.47       345.96 
TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GH 
       78.94        39.25        58.75        47.54       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GU 
       22.55        75.48        90.94       101.95        13.87        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MG 
       21.67       129.24        28.80        19.76        61.51       103.17 
TCGA-EE-A2MH TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
       16.96       248.61       136.44        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-ER-A19J TCGA-ER-A19L 
       25.84         3.68        26.73        23.47         6.41       131.08 
TCGA-ER-A19M TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z4 
       61.05        33.21        80.48        48.59       202.62        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZJ 
        7.76        27.68        53.52        40.27         9.70        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY 
       23.93       101.26       148.77        53.16        26.56        27.06 
TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
       50.14         0.20       117.93        84.72        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

$`AMP PEAK 22(20Q13.2) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z1 TCGA-DA-A1HY 
      121.22         9.30        49.74         2.70        11.34       117.17 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
       35.93       107.34        53.92        23.44        68.09        28.60 
TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
       10.49        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N 
        4.93        78.87        47.84        32.19        44.35        18.58 
TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 
       37.35        55.89        25.87        17.92        46.82        24.43 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GR 
       43.23       314.53        89.33        54.71        55.00        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MI TCGA-EE-A2MJ 
       55.59        19.56        47.28       103.27       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR 
      144.76       203.01       167.87        47.54        43.23       103.56 
TCGA-EE-A3AA TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19N 
        4.24        13.81       138.77        12.59        26.37        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1ZB 
       79.99        80.32       216.92       228.59        20.91        48.85 
TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZW TCGA-FS-A1ZZ 
       15.45        32.71        74.73        11.41        49.48        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       77.79        12.43        49.45        22.98        47.54        76.41 
TCGA-GN-A262 TCGA-GN-A266 
      120.46        10.09 

  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                           0.2                            2.7 
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                        345.96                         314.53 
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                        51.650                         45.585 
[1] "0.2 - 346.0 (51.6)" "2.7 - 314.5 (45.6)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
[1] "hr=" "1.2"
D22V2, continuous
D22V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 22(20Q13.2) MUTATED     28   54
  AMP PEAK 22(20Q13.2) WILD-TYPE   34   42
        clus
vv       AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE
  FEMALE                           28                             34
  MALE                             54                             42
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 22(20Q13.2) MUTATED   67  2   2   1   0
  AMP PEAK 22(20Q13.2) WILD-TYPE 67  0   0   0   2
D22V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 22(20Q13.2) MUTATED   44  1   5   8  0   1   4   2  6  2
  AMP PEAK 22(20Q13.2) WILD-TYPE 43  1   2   5  1   2   6   3  6  0
D22V5, multiclass
D22V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 22(20Q13.2) MUTATED        12        6        6        7         2
  AMP PEAK 22(20Q13.2) WILD-TYPE       5        3        7       11         6
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 22(20Q13.2) MUTATED           2         7         3          4
  AMP PEAK 22(20Q13.2) WILD-TYPE         7         1         4          2
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 22(20Q13.2) MUTATED            9          9        3
  AMP PEAK 22(20Q13.2) WILD-TYPE          8          9        2
D22V7, multiclass

Clustering(23) Variable = Amp Peak 23(22q13.2) mutation analysis
D23V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 23(22Q13.2) MUTATED   41 32
  AMP PEAK 23(22Q13.2) WILD-TYPE 40 41
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                            73                             81 
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                            32                             41 
$`AMP PEAK 23(22Q13.2) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z1 
       71.24         9.30        21.47       148.31         6.38        11.34 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I7 
       48.89        36.03       117.17        20.38       194.83        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F5 TCGA-EE-A17Z TCGA-EE-A20H 
       53.92        65.92        23.44       215.44         8.65       168.26 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29X TCGA-EE-A2A2 
        2.56        44.35        18.58        14.47        17.92        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GM 
       39.25        58.75        47.54       182.01        22.55        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2ME TCGA-EE-A2MJ 
       90.94       101.95       129.24        28.80       103.27        96.23 
TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA 
       47.54        43.23       103.56       136.44        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-ER-A19L TCGA-ER-A19M 
      122.73         3.68        26.73        23.47       131.08        61.05 
TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FS-A1YY TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZD 
       80.32        80.48       228.59         7.76        27.68        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZS 
       40.27         9.70        32.71        23.93       101.26       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A4F2 TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        50.14         0.20 
TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       47.54       117.93        84.72        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

$`AMP PEAK 23(22Q13.2) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z3 TCGA-DA-A1I2 
      121.22        58.03        49.74         2.70         3.22       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 
       35.93       107.34        68.09        28.60        10.49        15.68 
TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82        33.73        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H 
       78.87        63.32        47.84        13.97        39.62        32.19 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A0 
       56.42        37.35        55.89       345.96        25.87        46.82 
TCGA-EE-A2A1 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GJ TCGA-EE-A2GK 
       78.94        43.23       314.53       135.91        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
       55.00        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2MG TCGA-EE-A2MH 
       21.67        19.76        61.51        47.28       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A2MT 
      204.62       144.76       203.01       167.87       248.61        41.59 
TCGA-EE-A3AC TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       25.84        13.81       138.77        12.59        26.37         6.41 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z0 
       44.05        79.99        33.21       216.92        48.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZB TCGA-FS-A1ZF TCGA-FS-A1ZJ TCGA-FS-A1ZP 
       20.91        28.08        48.85        15.45        47.38        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 
       11.41        27.02        77.79        12.43        49.45        22.98 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A266 
       76.41       120.46        10.09 

  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                           0.2                            2.7 
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                        228.59                         345.96 
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                         48.89                          47.28 
[1] "0.2 - 228.6 (48.9)" "2.7 - 346.0 (47.3)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
[1] "hr=" "1.1"
D23V2, continuous
D23V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 23(22Q13.2) MUTATED     27   47
  AMP PEAK 23(22Q13.2) WILD-TYPE   35   49
        clus
vv       AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE
  FEMALE                           27                             35
  MALE                             47                             49
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 23(22Q13.2) MUTATED   60  1   1   1   1
  AMP PEAK 23(22Q13.2) WILD-TYPE 74  1   1   0   1
D23V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 23(22Q13.2) MUTATED   35  0   5   6  0   2   4   4  8  1
  AMP PEAK 23(22Q13.2) WILD-TYPE 52  2   2   7  1   1   6   1  4  1
D23V5, multiclass
D23V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 23(22Q13.2) MUTATED         6        4        5        6         3
  AMP PEAK 23(22Q13.2) WILD-TYPE      11        5        8       12         5
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 23(22Q13.2) MUTATED           3         6         3          5
  AMP PEAK 23(22Q13.2) WILD-TYPE         6         2         4          1
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 23(22Q13.2) MUTATED            8         11        2
  AMP PEAK 23(22Q13.2) WILD-TYPE          9          7        3
D23V7, multiclass

Clustering(24) Variable = Amp Peak 24(Xq28) mutation analysis
D24V1, survival
                             sevent
clus2                          0  1
  AMP PEAK 24(XQ28) MUTATED   13 14
  AMP PEAK 24(XQ28) WILD-TYPE 68 59
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                         27                         127 
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                         14                          59 
$`AMP PEAK 24(XQ28) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MV TCGA-DA-A1I0 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A29A 
       71.24        21.47        20.38        10.49       215.44        63.32 
TCGA-EE-A29D TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2GH TCGA-EE-A2GN TCGA-EE-A3AE 
       13.97        14.47       345.96       182.01        90.94        26.73 
TCGA-ER-A19M TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FS-A1ZA TCGA-FS-A1ZD TCGA-FS-A1ZG 
       61.05        80.32        80.48        27.68        53.52         9.70 
TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZU TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-GN-A262 
       23.93        74.73        26.56        27.02        77.79       120.46 
TCGA-GN-A264 TCGA-GN-A268 TCGA-GN-A26D 
      117.93        62.76        39.58 

$`AMP PEAK 24(XQ28) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW 
      121.22        58.03         9.30       148.31        49.74         2.70 
TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
        6.38        11.34         3.22        48.89        36.03       117.17 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X 
       65.92        23.44        68.09        28.60        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
        8.65        33.73        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
       78.87       168.26        47.84        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V 
       44.35        18.58        56.42        37.35        55.89        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ 
       47.54        43.23       314.53       135.91        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       54.71        55.00        75.48       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24       122.73        25.84         3.68        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        33.21       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZF 
       20.91        28.08         7.76        48.85        40.27        15.45 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       32.71        47.38       101.26        11.41       148.77        53.16 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 
       49.48        27.06        50.14        12.43        49.45         0.20 
TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       22.98        47.54        76.41        84.72        10.09        64.41 
TCGA-GN-A26A 
       32.48 

  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                        9.7                         0.2 
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                     345.96                      314.53 
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                      61.05                       47.54 
[1] "9.7 - 346.0 (61.0)" "0.2 - 314.5 (47.5)"
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "AMP PEAK 24(XQ28) MUTATED"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "AMP PEAK 24(XQ28) MUTATED"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "AMP PEAK 24(XQ28) MUTATED"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
[1] "hr=" "1"  
D24V2, continuous
D24V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 24(XQ28) MUTATED     15   13
  AMP PEAK 24(XQ28) WILD-TYPE   47   83
        clus
vv       AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE
  FEMALE                        15                          47
  MALE                          13                          83
                             vv
clus                           M0  M1 M1A M1B M1C
  AMP PEAK 24(XQ28) MUTATED    24   0   1   0   0
  AMP PEAK 24(XQ28) WILD-TYPE 110   2   1   1   2
D24V4, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 24(XQ28) MUTATED   14  0   2   2  0   1   3   1  2  1
  AMP PEAK 24(XQ28) WILD-TYPE 73  2   5  11  1   2   7   4 10  1
D24V5, multiclass
D24V6, continuous
                             vv
clus                          STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  AMP PEAK 24(XQ28) MUTATED         1        1        2        2         2
  AMP PEAK 24(XQ28) WILD-TYPE      16        8       11       16         6
                             vv
clus                          STAGE IIB STAGE IIC STAGE III STAGE IIIA
  AMP PEAK 24(XQ28) MUTATED           3         3         1          2
  AMP PEAK 24(XQ28) WILD-TYPE         6         5         6          4
                             vv
clus                          STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 24(XQ28) MUTATED            3          5        0
  AMP PEAK 24(XQ28) WILD-TYPE         14         13        5
D24V7, multiclass

Clustering(25) Variable = Del Peak  1(1p36.31) mutation analysis
D25V1, survival
                                sevent
clus2                             0  1
  DEL PEAK  1(1P36.31) MUTATED   23 18
  DEL PEAK  1(1P36.31) WILD-TYPE 58 55
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            41                            113 
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            18                             55 
$`DEL PEAK  1(1P36.31) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3MV TCGA-D9-A1JX TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I7 
       58.03        21.47         6.38        20.38       176.55        61.18 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A182 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29D 
      215.44        15.68        14.70        78.87       168.26        13.97 
TCGA-EE-A29R TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2M5 
       14.47       135.91        22.55       101.95        14.30        21.67 
TCGA-EE-A2MD TCGA-EE-A2MH TCGA-EE-A2MK TCGA-EE-A2MS TCGA-EE-A3AB TCGA-EE-A3AD 
       47.28        16.96       144.76       136.44       122.73         3.68 
TCGA-EE-A3AF TCGA-ER-A19D TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       13.81        12.59        33.21       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z7 TCGA-FS-A1ZJ TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY 
      202.62         7.76        47.38        53.16        49.48        27.06 
TCGA-FS-A4F0 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A26D 
       77.79        49.45         0.20        47.54        39.58 

$`DEL PEAK  1(1P36.31) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW 
      121.22        71.24         9.30       148.31        49.74         2.70 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 
       11.34         3.22        48.89        36.03       117.17       194.83 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC 
       35.93       107.34        53.92        65.92        23.44        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 
       28.60        10.49        29.82         8.65        33.73        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H 
        4.93       109.64        63.32        47.84        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S 
        2.56        44.35        18.58        56.42        37.35        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GH 
       39.25        58.75        47.54        43.23       314.53       182.01 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP 
       89.33        54.71        55.00        75.48        90.94        13.87 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        19.56        67.13       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML 
       61.51       103.27       103.17       204.62        96.23       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT 
      167.87        47.54       248.61        43.23       103.56        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AG TCGA-EE-A3AH 
       53.26         4.24        25.84        26.73        23.47       138.77 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 
       26.37         6.41       131.08        61.05        44.05        79.99 
TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB 
       80.32        80.48        20.91        28.08        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK 
       53.52        40.27        15.45         9.70        32.71        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZZ 
      101.26        74.73        11.41       148.77        26.56        27.02 
TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       50.14        12.43        22.98        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       84.72        10.09        64.41        62.76        32.48 

  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                          0.20                           2.56 
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                        228.59                         345.96 
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                         47.38                          47.84 
[1] "0.2 - 228.6 (47.4)" "2.6 - 346.0 (47.8)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
[1] "hr=" "1.1"
D25V2, continuous
D25V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  1(1P36.31) MUTATED     19   23
  DEL PEAK  1(1P36.31) WILD-TYPE   43   73
        clus
vv       DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  FEMALE                           19                             43
  MALE                             23                             73
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK  1(1P36.31) MUTATED    34   1   2   0   0
  DEL PEAK  1(1P36.31) WILD-TYPE 100   1   0   1   2
D25V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  1(1P36.31) MUTATED   24  0   1   5  0   1   4   0  2  1
  DEL PEAK  1(1P36.31) WILD-TYPE 63  2   6   8  1   2   6   5 10  1
D25V5, multiclass
D25V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK  1(1P36.31) MUTATED         5        2        3        7         2
  DEL PEAK  1(1P36.31) WILD-TYPE      12        7       10       11         6
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK  1(1P36.31) MUTATED           2         1         2          0
  DEL PEAK  1(1P36.31) WILD-TYPE         7         7         5          6
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  1(1P36.31) MUTATED            4          7        2
  DEL PEAK  1(1P36.31) WILD-TYPE         13         11        3
D25V7, multiclass

Clustering(26) Variable = Del Peak  2(1p22.1) mutation analysis
D26V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  2(1P22.1) MUTATED   25 15
  DEL PEAK  2(1P22.1) WILD-TYPE 56 58
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                           40                           114 
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                           15                            58 
$`DEL PEAK  2(1P22.1) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A3Z3 TCGA-DA-A1I0 TCGA-DA-A1I2 
       71.24         9.30        21.47         3.22        20.38       176.55 
TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A20B 
       61.18        53.92        65.92       215.44        15.68       109.64 
TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2GC 
      168.26        47.84        13.97        14.47       345.96        43.23 
TCGA-EE-A2GE TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2MK TCGA-EE-A2MP TCGA-EE-A2MS 
      135.91       101.95        14.30       144.76       248.61       136.44 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19L TCGA-ER-A19M 
      122.73         3.68       138.77        12.59       131.08        61.05 
TCGA-ER-A3PL TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z7 TCGA-FS-A1ZJ TCGA-FS-A1ZS 
       33.21        48.59       202.62         7.76        47.38       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-GN-A262 TCGA-GN-A26D 
       53.16        49.48       120.46        39.58 

$`DEL PEAK  2(1P22.1) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
      121.22        58.03       148.31        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I4 
       11.34        48.89        36.03       117.17       194.83        35.93 
TCGA-DA-A1I5 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X 
      107.34        23.44        68.09        28.60        10.49        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F 
        8.65        33.73        14.70        26.86         4.93        78.87 
TCGA-EE-A29A TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       63.32        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       56.42        37.35        55.89        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD 
       78.94        24.43        39.25        58.75        47.54       314.53 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      182.01        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       90.94        13.87        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MM 
      103.17        16.96       204.62        96.23       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       47.54        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19F TCGA-ER-A19J 
       25.84        26.73        13.81        23.47        26.37         6.41 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY 
       44.05        79.99        80.32        80.48       216.92       228.59 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       20.91        28.08        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 
       11.41        26.56        27.06        27.02        77.79        50.14 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       12.43        49.45         0.20        22.98        47.54        76.41 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 

  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                         3.22                          0.20 
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                       345.96                        314.53 
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                       57.485                        44.200 
[1] "3.2 - 346.0 (57.5)" "0.2 - 314.5 (44.2)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
[1] "hr=" "1.9"
D26V2, continuous
D26V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  2(1P22.1) MUTATED     17   24
  DEL PEAK  2(1P22.1) WILD-TYPE   45   72
        clus
vv       DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE
  FEMALE                          17                            45
  MALE                            24                            72
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK  2(1P22.1) MUTATED    34   0   2   0   0
  DEL PEAK  2(1P22.1) WILD-TYPE 100   2   0   1   2
D26V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  2(1P22.1) MUTATED   20  0   1   6  0   1   4   1  3  1
  DEL PEAK  2(1P22.1) WILD-TYPE 67  2   6   7  1   2   6   4  9  1
D26V5, multiclass
D26V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK  2(1P22.1) MUTATED         5        1        3        7         0
  DEL PEAK  2(1P22.1) WILD-TYPE      12        8       10       11         8
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK  2(1P22.1) MUTATED           1         2         3          0
  DEL PEAK  2(1P22.1) WILD-TYPE         8         6         4          6
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  2(1P22.1) MUTATED            6          7        1
  DEL PEAK  2(1P22.1) WILD-TYPE         11         11        4
D26V7, multiclass

Clustering(27) Variable = Del Peak  3(2q37.3) mutation analysis
D27V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  3(2Q37.3) MUTATED   22 18
  DEL PEAK  3(2Q37.3) WILD-TYPE 59 55
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                           40                           114 
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                           18                            55 
$`DEL PEAK  3(2Q37.3) MUTATED`
TCGA-D3-A3C6 TCGA-D9-A148 TCGA-D9-A149 TCGA-DA-A1I0 TCGA-DA-A1IA TCGA-EE-A20B 
       58.03       148.31        49.74        20.38        65.92       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29P 
       78.87       168.26        47.84        13.97        39.62        56.42 
TCGA-EE-A29Q TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GR TCGA-EE-A2M7 TCGA-EE-A2MH 
       37.35        58.75        43.23        14.30        28.80        16.96 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MS TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A3ET 
       96.23       144.76       136.44        13.81        23.47        80.32 
TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1ZJ 
       33.21       216.92        48.59       228.59       202.62        47.38 
TCGA-FS-A1ZM TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A262 
      101.26        27.02        77.79         0.20        47.54       120.46 
TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26D 
      117.93        10.09        64.41        39.58 

$`DEL PEAK  3(2Q37.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A1JX 
      121.22        71.24         9.30        21.47         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 
       11.34         3.22        48.89        36.03       117.17       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IB 
      176.55        35.93       107.34        61.18        53.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       68.09        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A29A 
        8.65        33.73        14.70        26.86         4.93        63.32 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29S 
       32.19         2.56        44.35        18.58        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       39.25        47.54       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MI 
       19.76        61.51        47.28       103.27       103.17       204.62 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       26.73       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FR-A3YN TCGA-FS-A1Z3 TCGA-FS-A1Z4 
       61.05        44.05        79.99        80.48        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
        9.70        32.71        23.93        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A4F2 TCGA-FS-A4F9 
       53.16        26.56        49.48        27.06        50.14        12.43 
TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26A 
       49.45        22.98        76.41        84.72        62.76        32.48 

  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                         0.20                          2.56 
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                       228.59                        345.96 
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                       53.080                        45.585 
[1] "0.2 - 228.6 (53.1)" "2.6 - 346.0 (45.6)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
[1] "hr=" "1.3"
D27V2, continuous
D27V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(2Q37.3) MUTATED     19   22
  DEL PEAK  3(2Q37.3) WILD-TYPE   43   74
        clus
vv       DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE
  FEMALE                          19                            43
  MALE                            22                            74
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK  3(2Q37.3) MUTATED    29   1   2   1   0
  DEL PEAK  3(2Q37.3) WILD-TYPE 105   1   0   0   2
D27V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  3(2Q37.3) MUTATED   25  0   2   4  0   0   0   1  2  0
  DEL PEAK  3(2Q37.3) WILD-TYPE 62  2   5   9  1   3  10   4 10  2
D27V5, multiclass
D27V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK  3(2Q37.3) MUTATED         3        2        3        8         1
  DEL PEAK  3(2Q37.3) WILD-TYPE      14        7       10       10         7
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK  3(2Q37.3) MUTATED           4         2         1          2
  DEL PEAK  3(2Q37.3) WILD-TYPE         5         6         6          4
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  3(2Q37.3) MUTATED            2          2        2
  DEL PEAK  3(2Q37.3) WILD-TYPE         15         16        3
D27V7, multiclass

Clustering(28) Variable = Del Peak  4(3q23) mutation analysis
D28V1, survival
                             sevent
clus2                          0  1
  DEL PEAK  4(3Q23) MUTATED   13 10
  DEL PEAK  4(3Q23) WILD-TYPE 68 63
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                         23                         131 
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                         10                          63 
$`DEL PEAK  4(3Q23) MUTATED`
TCGA-D3-A1Q7 TCGA-DA-A1I2 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-EE-A29H TCGA-EE-A29P 
      121.22       176.55       107.34        61.18        32.19        56.42 
TCGA-EE-A29X TCGA-EE-A2GC TCGA-EE-A2GJ TCGA-EE-A2GN TCGA-EE-A2M8 TCGA-EE-A2MR 
       17.92        43.23        89.33        90.94        19.76       103.56 
TCGA-ER-A19F TCGA-ER-A19J TCGA-FS-A1YX TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FW-A3I3 
       26.37         6.41        48.59        47.38       101.26         0.20 
TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A267 TCGA-GN-A268 
       47.54       120.46       117.93        64.41        62.76 

$`DEL PEAK  4(3Q23) WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
       58.03        71.24         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW 
        2.70         6.38        11.34         3.22        48.89        36.03 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I8 TCGA-DA-A1IA 
      117.17        20.38       194.83        35.93        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29R 
       39.62         2.56        44.35        18.58        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
       55.89       345.96        25.87        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       39.25        58.75        47.54       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GP 
       22.55        54.71        55.00        75.48       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       14.30        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       28.80        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 
      138.77        12.59       131.08        61.05        44.05        79.99 
TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 
       80.32        33.21        80.48       216.92       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZP 
       40.27        15.45         9.70        32.71        23.93        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 
       27.02        77.79        50.14        12.43        49.45        22.98 
TCGA-GN-A261 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A26A TCGA-GN-A26D 
       76.41        84.72        10.09        32.48        39.58 

  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                       0.20                        2.56 
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                     176.55                      345.96 
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                      61.18                       46.82 
[1] "0.2 - 176.6 (61.2)" "2.6 - 346.0 (46.8)"
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
[1] "hr=" "1.2"
D28V2, continuous
D28V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  4(3Q23) MUTATED     12   11
  DEL PEAK  4(3Q23) WILD-TYPE   50   85
        clus
vv       DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE
  FEMALE                        12                          50
  MALE                          11                          85
                             vv
clus                           M0  M1 M1A M1B M1C
  DEL PEAK  4(3Q23) MUTATED    17   2   0   0   1
  DEL PEAK  4(3Q23) WILD-TYPE 117   0   2   1   1
D28V4, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  4(3Q23) MUTATED   14  1   1   0  0   0   2   1  1  0
  DEL PEAK  4(3Q23) WILD-TYPE 73  1   6  13  1   3   8   4 11  2
D28V5, multiclass
D28V6, continuous
                             vv
clus                          STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK  4(3Q23) MUTATED         3        2        2        0         1
  DEL PEAK  4(3Q23) WILD-TYPE      14        7       11       18         7
                             vv
clus                          STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK  4(3Q23) MUTATED           2         1         2          1
  DEL PEAK  4(3Q23) WILD-TYPE         7         7         5          5
                             vv
clus                          STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  4(3Q23) MUTATED            1          1        3
  DEL PEAK  4(3Q23) WILD-TYPE         16         17        2
D28V7, multiclass

Clustering(29) Variable = Del Peak  5(4q22.1) mutation analysis
D29V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  5(4Q22.1) MUTATED   19 12
  DEL PEAK  5(4Q22.1) WILD-TYPE 62 61
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                           31                           123 
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                           12                            61 
$`DEL PEAK  5(4Q22.1) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A3Z3 TCGA-DA-A1HW 
       71.24        21.47       148.31        49.74         3.22        36.03 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A20B TCGA-EE-A29C TCGA-EE-A29M TCGA-EE-A29T 
      215.44        15.68       109.64        47.84        44.35       345.96 
TCGA-EE-A2A5 TCGA-EE-A2GI TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2M5 TCGA-EE-A2M6 
       39.25        22.55        75.48       101.95        21.67       129.24 
TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19L 
      167.87        43.23       136.44        23.47        12.59       131.08 
TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A4F2 TCGA-FW-A3TU TCGA-GN-A262 
      202.62        28.08        27.68        50.14        47.54       120.46 
TCGA-GN-A266 
       10.09 

$`DEL PEAK  5(4Q22.1) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
      121.22        58.03         9.30         2.70         6.38        11.34 
TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
       48.89       117.17        20.38       194.83       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC 
      107.34        61.18        53.92        65.92        23.44        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
       28.60        10.49        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D 
       26.86         4.93        78.87       168.26        63.32        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       39.62        32.19         2.56        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       14.47        55.89        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       24.43        58.75        47.54        43.23       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GP 
      182.01        89.33        54.71        55.00        90.94        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M7 TCGA-EE-A2M8 
       14.30        55.59        19.56        67.13        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR 
       96.23       144.76       203.01        47.54       248.61       103.56 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19M 
       26.73        13.81       138.77        26.37         6.41        61.05 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW 
       44.05        79.99        80.32        33.21        80.48       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD 
       48.59       228.59        20.91         7.76        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC 
       49.48        27.06        27.02        77.79        12.43        49.45 
TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 
        0.20        22.98        76.41       117.93        84.72        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                         3.22                          0.20 
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                       345.96                        314.53 
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                        47.84                         47.54 
[1] "3.2 - 346.0 (47.8)" "0.2 - 314.5 (47.5)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
[1] "hr=" "1.5"
D29V2, continuous
D29V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  5(4Q22.1) MUTATED     17   14
  DEL PEAK  5(4Q22.1) WILD-TYPE   45   82
        clus
vv       DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE
  FEMALE                          17                            45
  MALE                            14                            82
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK  5(4Q22.1) MUTATED    25   0   0   1   0
  DEL PEAK  5(4Q22.1) WILD-TYPE 109   2   2   0   2
D29V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  5(4Q22.1) MUTATED   16  0   0   3  0   2   1   1  2  1
  DEL PEAK  5(4Q22.1) WILD-TYPE 71  2   7  10  1   1   9   4 10  1
D29V5, multiclass
D29V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK  5(4Q22.1) MUTATED         4        2        4        3         0
  DEL PEAK  5(4Q22.1) WILD-TYPE      13        7        9       15         8
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK  5(4Q22.1) MUTATED           0         3         0          1
  DEL PEAK  5(4Q22.1) WILD-TYPE         9         5         7          5
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  5(4Q22.1) MUTATED            5          1        0
  DEL PEAK  5(4Q22.1) WILD-TYPE         12         17        5
D29V7, multiclass

Clustering(30) Variable = Del Peak  6(4q34.3) mutation analysis
D30V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  6(4Q34.3) MUTATED   24 16
  DEL PEAK  6(4Q34.3) WILD-TYPE 57 57
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                           40                           114 
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                           16                            57 
$`DEL PEAK  6(4Q34.3) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-DA-A1HW TCGA-DA-A1HY 
       71.24        21.47       148.31        49.74        36.03       117.17 
TCGA-DA-A1I7 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A181 TCGA-EE-A20B TCGA-EE-A20H 
       61.18       215.44        15.68        33.73       109.64       168.26 
TCGA-EE-A29C TCGA-EE-A29M TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A5 TCGA-EE-A2A6 
       47.84        44.35       345.96        17.92        39.25        58.75 
TCGA-EE-A2GI TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       22.55        75.48       101.95        67.13        21.67       129.24 
TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A3ET 
      167.87        43.23        41.59        23.47        12.59        80.32 
TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
      202.62        28.08        27.68        40.27        15.45         9.70 
TCGA-FS-A1ZJ TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A266 
       47.38         0.20        47.54        10.09 

$`DEL PEAK  6(4Q34.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
      121.22        58.03         9.30         2.70         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
        3.22        48.89        20.38       194.83       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
      107.34        53.92        65.92        23.44        68.09        28.60 
TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       10.49        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
       78.87        63.32        13.97        39.62        32.19         2.56 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V 
       18.58        56.42        37.35        14.47        55.89        25.87 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       46.82        78.94        24.43        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN 
      135.91       182.01        89.33        54.71        55.00        90.94 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M7 TCGA-EE-A2M8 
       13.87        14.30        55.59        19.56        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR 
       96.23       144.76       203.01        47.54       248.61       103.56 
TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
      136.44        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       26.73        13.81       138.77        26.37         6.41       131.08 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW 
       61.05        44.05        79.99        33.21        80.48       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD 
       48.59       228.59        20.91         7.76        48.85        53.52 
TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 
       53.16        26.56        49.48        27.06        27.02        77.79 
TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 
       50.14        12.43        49.45        22.98        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        84.72        64.41        62.76        32.48        39.58 

  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                         0.20                          2.56 
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                       345.96                        314.53 
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                       45.865                        48.720 
[1] "0.2 - 346.0 (45.9)" "2.6 - 314.5 (48.7)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
[1] "hr=" "1.3"
D30V2, continuous
D30V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  6(4Q34.3) MUTATED     23   18
  DEL PEAK  6(4Q34.3) WILD-TYPE   39   78
        clus
vv       DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE
  FEMALE                          23                            39
  MALE                            18                            78
                               vv
clus                            M0 M1 M1A M1B M1C
  DEL PEAK  6(4Q34.3) MUTATED   35  1   0   1   0
  DEL PEAK  6(4Q34.3) WILD-TYPE 99  1   2   0   2
D30V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  6(4Q34.3) MUTATED   24  0   1   2  0   2   3   1  3  1
  DEL PEAK  6(4Q34.3) WILD-TYPE 63  2   6  11  1   1   7   4  9  1
D30V5, multiclass
D30V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK  6(4Q34.3) MUTATED         6        4        6        3         0
  DEL PEAK  6(4Q34.3) WILD-TYPE      11        5        7       15         8
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK  6(4Q34.3) MUTATED           0         4         0          2
  DEL PEAK  6(4Q34.3) WILD-TYPE         9         4         7          4
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  6(4Q34.3) MUTATED            5          3        1
  DEL PEAK  6(4Q34.3) WILD-TYPE         12         15        4
D30V7, multiclass

Clustering(31) Variable = Del Peak  7(5q11.2) mutation analysis
D31V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  7(5Q11.2) MUTATED   29 18
  DEL PEAK  7(5Q11.2) WILD-TYPE 52 55
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           47                           107 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           18                            55 
$`DEL PEAK  7(5Q11.2) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z1 
       58.03        71.24        21.47       148.31         6.38        11.34 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I0 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A3F5 
       48.89        36.03        20.38       107.34        61.18       215.44 
TCGA-EE-A17X TCGA-EE-A185 TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       29.82         4.93       168.26        47.84        13.97        39.62 
TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29V TCGA-EE-A2A2 TCGA-EE-A2GB 
       44.35        56.42        37.35        25.87        24.43        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GM TCGA-EE-A2GR 
       43.23       314.53       135.91        22.55        75.48        14.30 
TCGA-EE-A2MJ TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE 
       96.23       167.87       248.61       122.73         3.68        26.73 
TCGA-EE-A3AH TCGA-FS-A1YX TCGA-FS-A1ZK TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY 
      138.77        48.59        23.93        53.16        49.48        27.06 
TCGA-FS-A4F2 TCGA-GN-A262 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
       50.14       120.46        10.09        64.41        62.76 

$`DEL PEAK  7(5Q11.2) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z3 TCGA-DA-A1HY 
      121.22         9.30        49.74         2.70         3.22       117.17 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
      194.83       176.55        35.93        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 
       68.09        28.60        10.49        15.68         8.65        33.73 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29H 
       14.70        26.86       109.64        78.87        63.32        32.19 
TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X 
        2.56        18.58        14.47        55.89       345.96        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GH TCGA-EE-A2GJ 
       46.82        78.94        39.25        58.75       182.01        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS 
       54.71        55.00        90.94       101.95        13.87        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS 
      144.76       203.01        47.54        43.23       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AF TCGA-EE-A3AG 
       41.59        53.26         4.24        25.84        13.81        23.47 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
       12.59        26.37         6.41       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY 
       79.99        80.32        33.21        80.48       216.92       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZZ 
      101.26        74.73        11.41       148.77        26.56        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU 
       77.79        12.43        49.45         0.20        22.98        47.54 
TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A26A TCGA-GN-A26D 
       76.41       117.93        84.72        32.48        39.58 

  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                         3.68                          0.20 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                       314.53                        345.96 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                        48.59                         47.38 
[1] "3.7 - 314.5 (48.6)" "0.2 - 346.0 (47.4)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
[1] "hr=" "1.4"
D31V2, continuous
D31V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  7(5Q11.2) MUTATED     20   28
  DEL PEAK  7(5Q11.2) WILD-TYPE   42   68
        clus
vv       DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE
  FEMALE                          20                            42
  MALE                            28                            68
                               vv
clus                            M0 M1 M1A M1B M1C
  DEL PEAK  7(5Q11.2) MUTATED   40  0   1   1   1
  DEL PEAK  7(5Q11.2) WILD-TYPE 94  2   1   0   1
D31V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  7(5Q11.2) MUTATED   25  0   3   6  0   1   2   0  5  1
  DEL PEAK  7(5Q11.2) WILD-TYPE 62  2   4   7  1   2   8   5  7  1
D31V5, multiclass
D31V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK  7(5Q11.2) MUTATED         5        3        3        4         0
  DEL PEAK  7(5Q11.2) WILD-TYPE      12        6       10       14         8
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK  7(5Q11.2) MUTATED           5         4         1          2
  DEL PEAK  7(5Q11.2) WILD-TYPE         4         4         6          4
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  7(5Q11.2) MUTATED            7          6        1
  DEL PEAK  7(5Q11.2) WILD-TYPE         10         12        4
D31V7, multiclass

Clustering(32) Variable = Del Peak  8(5q31.3) mutation analysis
D32V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  8(5Q31.3) MUTATED   37 23
  DEL PEAK  8(5Q31.3) WILD-TYPE 44 50
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                           60                            94 
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                           23                            50 
$`DEL PEAK  8(5Q31.3) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z1 
       58.03        71.24        21.47       148.31         6.38        11.34 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I5 TCGA-DA-A1I7 
       48.89        36.03       117.17        20.38       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A185 TCGA-EE-A20H 
       53.92       215.44        29.82         8.65         4.93       168.26 
TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S 
       47.84        39.62        44.35        56.42        37.35        55.89 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2GB TCGA-EE-A2GC 
       25.87        17.92        46.82        24.43        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2GR 
      314.53       135.91        22.55        89.33        75.48        14.30 
TCGA-EE-A2GT TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2MM 
       19.56       129.24        28.80       103.17        96.23       167.87 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE 
      248.61        43.23       103.56       122.73         3.68        26.73 
TCGA-EE-A3AH TCGA-FS-A1YX TCGA-FS-A1ZB TCGA-FS-A1ZF TCGA-FS-A1ZM TCGA-FS-A1ZT 
      138.77        48.59        48.85        15.45       101.26        53.16 
TCGA-FS-A1ZW TCGA-FS-A4F0 TCGA-GN-A262 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
       49.48        77.79       120.46        10.09        64.41        62.76 

$`DEL PEAK  8(5Q31.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z3 TCGA-DA-A1I1 
      121.22         9.30        49.74         2.70         3.22       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
      176.55        35.93        65.92        23.44        68.09        28.60 
TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20B 
       10.49        15.68        33.73        14.70        26.86       109.64 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N 
       78.87        63.32        13.97        32.19         2.56        18.58 
TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GH 
       14.47       345.96        78.94        39.25        58.75       182.01 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS 
       54.71        55.00        90.94       101.95        13.87        55.59 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       67.13        21.67        19.76        61.51        47.28       103.27 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MS 
       16.96       204.62       144.76       203.01        47.54       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AF TCGA-EE-A3AG 
       41.59        53.26         4.24        25.84        13.81        23.47 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
       12.59        26.37         6.41       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY 
       79.99        80.32        33.21        80.48       216.92       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZD 
      202.62        20.91        28.08         7.76        27.68        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP 
       40.27         9.70        32.71        47.38        23.93        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F2 
       11.41       148.77        26.56        27.06        27.02        50.14 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       12.43        49.45         0.20        22.98        47.54        76.41 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        84.72        32.48        39.58 

  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                         3.68                          0.20 
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                       314.53                        345.96 
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                       49.185                        42.820 
[1] "3.7 - 314.5 (49.2)" "0.2 - 346.0 (42.8)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
[1] "hr=" "1.5"
D32V2, continuous
D32V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  8(5Q31.3) MUTATED     25   37
  DEL PEAK  8(5Q31.3) WILD-TYPE   37   59
        clus
vv       DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE
  FEMALE                          25                            37
  MALE                            37                            59
                               vv
clus                            M0 M1 M1A M1B M1C
  DEL PEAK  8(5Q31.3) MUTATED   53  0   1   1   1
  DEL PEAK  8(5Q31.3) WILD-TYPE 81  2   1   0   1
D32V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  8(5Q31.3) MUTATED   35  0   3   5  0   2   2   1  7  1
  DEL PEAK  8(5Q31.3) WILD-TYPE 52  2   4   8  1   1   8   4  5  1
D32V5, multiclass
D32V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK  8(5Q31.3) MUTATED         8        4        4        5         3
  DEL PEAK  8(5Q31.3) WILD-TYPE       9        5        9       13         5
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK  8(5Q31.3) MUTATED           6         4         2          3
  DEL PEAK  8(5Q31.3) WILD-TYPE         3         4         5          3
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  8(5Q31.3) MUTATED            7          7        1
  DEL PEAK  8(5Q31.3) WILD-TYPE         10         11        4
D32V7, multiclass

Clustering(33) Variable = Del Peak  9(6q26) mutation analysis
D33V1, survival
                             sevent
clus2                          0  1
  DEL PEAK  9(6Q26) MUTATED   48 45
  DEL PEAK  9(6Q26) WILD-TYPE 33 28
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                         93                          61 
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                         45                          28 
$`DEL PEAK  9(6Q26) MUTATED`
TCGA-D3-A3C6 TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z3 
       58.03       148.31        49.74         2.70         6.38         3.22 
TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1I8 
       48.89       117.17       194.83        35.93        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A182 
       65.92        68.09        10.49       215.44        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
       26.86         4.93       109.64       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29Q TCGA-EE-A29R 
       13.97        32.19         2.56        44.35        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A1 TCGA-EE-A2A2 
       55.89       345.96        25.87        17.92        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GL 
       39.25        58.75        47.54       314.53       135.91        55.00 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 
       90.94       101.95        13.87        55.59        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2MC TCGA-EE-A2MH TCGA-EE-A2MK TCGA-EE-A2MP 
      129.24        28.80        61.51        16.96       144.76       248.61 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
      136.44        41.59        53.26       122.73        25.84         3.68 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19N 
       13.81        23.47        12.59        26.37         6.41        44.05 
TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1ZA TCGA-FS-A1ZB 
       33.21       216.92        48.59       202.62        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM 
       53.52        15.45         9.70        32.71        47.38       101.26 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A264 
       27.02        50.14         0.20        22.98        47.54       117.93 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       64.41        62.76        32.48 

$`DEL PEAK  9(6Q26) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A3Z1 TCGA-DA-A1HW 
      121.22        71.24         9.30        21.47        11.34        36.03 
TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I5 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F8 
       20.38       176.55       107.34        23.44        28.60        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A20F TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A29P 
       29.82         8.65        78.87        39.62        18.58        56.42 
TCGA-EE-A2A0 TCGA-EE-A2GC TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
       46.82        43.23       182.01        22.55        89.33        54.71 
TCGA-EE-A2GM TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2ME 
       75.48        14.30        19.56        19.76        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      103.17       204.62        96.23       203.01       167.87        47.54 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A3AA TCGA-EE-A3AE TCGA-EE-A3AH TCGA-ER-A19L 
       43.23       103.56         4.24        26.73       138.77       131.08 
TCGA-ER-A19M TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FS-A1YY TCGA-FS-A1Z3 
       61.05        79.99        80.32        80.48       228.59        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZE TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A4F0 
       28.08         7.76        40.27        23.93        74.73        77.79 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A266 
       12.43        49.45        76.41       120.46        84.72        10.09 
TCGA-GN-A26D 
       39.58 

  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                       0.20                        4.24 
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                     345.96                      228.59 
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                      47.54                       47.54 
[1] "0.2 - 346.0 (47.5)" "4.2 - 228.6 (47.5)"
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
[1] "hr=" "1.1"
D33V2, continuous
D33V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  9(6Q26) MUTATED     39   57
  DEL PEAK  9(6Q26) WILD-TYPE   23   39
        clus
vv       DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE
  FEMALE                        39                          23
  MALE                          57                          39
                             vv
clus                          M0 M1 M1A M1B M1C
  DEL PEAK  9(6Q26) MUTATED   81  2   1   1   1
  DEL PEAK  9(6Q26) WILD-TYPE 53  0   1   0   1
D33V4, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  9(6Q26) MUTATED   49  0   6  10  1   1   5   4  8  2
  DEL PEAK  9(6Q26) WILD-TYPE 38  2   1   3  0   2   5   1  4  0
D33V5, multiclass
D33V6, continuous
                             vv
clus                          STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK  9(6Q26) MUTATED         9        5       10       10         4
  DEL PEAK  9(6Q26) WILD-TYPE       8        4        3        8         4
                             vv
clus                          STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK  9(6Q26) MUTATED           5         3         3          4
  DEL PEAK  9(6Q26) WILD-TYPE         4         5         4          2
                             vv
clus                          STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  9(6Q26) MUTATED           12         11        4
  DEL PEAK  9(6Q26) WILD-TYPE          5          7        1
D33V7, multiclass

Clustering(34) Variable = Del Peak 10(8p23.3) mutation analysis
D34V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 10(8P23.3) MUTATED   18 19
  DEL PEAK 10(8P23.3) WILD-TYPE 63 54
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                           37                           117 
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                           19                            54 
$`DEL PEAK 10(8P23.3) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A1JW TCGA-DA-A1IA TCGA-DA-A3F3 
       58.03         9.30       148.31         2.70        65.92        10.49 
TCGA-EE-A183 TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29V 
       26.86        47.84        32.19         2.56        44.35        25.87 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GI TCGA-EE-A2GS TCGA-EE-A2MG TCGA-EE-A2MH 
       24.43        39.25        22.55        55.59       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A2MU 
      204.62       167.87        47.54       248.61       136.44        53.26 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AG TCGA-ER-A19J TCGA-ER-A3PL TCGA-FS-A1YY 
      122.73        25.84        23.47         6.41        33.21       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1ZA TCGA-FS-A1ZJ TCGA-FS-A1ZT TCGA-FW-A3R5 TCGA-GN-A264 
      202.62        27.68        47.38        53.16        22.98       117.93 
TCGA-GN-A265 
       84.72 

$`DEL PEAK 10(8P23.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z1 
      121.22        71.24        21.47        49.74         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
        3.22        48.89        36.03       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IB 
      176.55        35.93       107.34        61.18        53.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       68.09        28.60       215.44        15.68        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H 
       33.73        14.70         4.93       109.64        78.87       168.26 
TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       63.32        13.97        39.62        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       14.47        55.89       345.96        17.92        46.82        78.94 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        14.30        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MJ 
       28.80        19.76        61.51        47.28       103.27        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AA 
      144.76       203.01        43.23       103.56        41.59         4.24 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
        3.68        26.73        13.81       138.77        12.59        26.37 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN 
      131.08        61.05        44.05        79.99        80.32        80.48 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB 
      216.92        48.59        20.91        28.08         7.76        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK 
       53.52        40.27        15.45         9.70        32.71        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZW 
      101.26        74.73        11.41       148.77        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       27.06        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A266 TCGA-GN-A267 
        0.20        47.54        76.41       120.46        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                         2.56                          0.20 
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                       248.61                        345.96 
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                        47.38                         48.59 
[1] "2.6 - 248.6 (47.4)" "0.2 - 346.0 (48.6)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A183                    TCGA-EE-A185 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
[1] "hr=" "1"  
D34V2, continuous
D34V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(8P23.3) MUTATED     11   27
  DEL PEAK 10(8P23.3) WILD-TYPE   51   69
        clus
vv       DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE
  FEMALE                          11                            51
  MALE                            27                            69
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK 10(8P23.3) MUTATED    29   1   1   1   0
  DEL PEAK 10(8P23.3) WILD-TYPE 105   1   1   0   2
D34V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 10(8P23.3) MUTATED   20  0   0   4  1   1   1   2  3  0
  DEL PEAK 10(8P23.3) WILD-TYPE 67  2   7   9  0   2   9   3  9  2
D34V5, multiclass
D34V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 10(8P23.3) MUTATED         6        4        5        2         1
  DEL PEAK 10(8P23.3) WILD-TYPE      11        5        8       16         7
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 10(8P23.3) MUTATED           1         0         3          0
  DEL PEAK 10(8P23.3) WILD-TYPE         8         8         4          6
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 10(8P23.3) MUTATED            4          2        2
  DEL PEAK 10(8P23.3) WILD-TYPE         13         16        3
D34V7, multiclass

Clustering(35) Variable = Del Peak 11(9p23) mutation analysis
D35V1, survival
                             sevent
clus2                          0  1
  DEL PEAK 11(9P23) MUTATED   55 52
  DEL PEAK 11(9P23) WILD-TYPE 26 21
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                        107                          47 
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                         52                          21 
$`DEL PEAK 11(9P23) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 TCGA-D9-A1JX 
       58.03        71.24         9.30        21.47        49.74         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 
       11.34         3.22        48.89        36.03       117.17       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC 
      176.55        35.93       107.34        53.92        65.92        68.09 
TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20B 
       10.49        29.82        33.73        14.70         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29L 
       78.87       168.26        47.84        13.97        39.62         2.56 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       18.58        56.42        37.35        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       17.92        46.82        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      314.53       135.91        22.55        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 
      101.95        13.87        14.30        55.59        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK 
      129.24        19.76        47.28        16.96       204.62       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MS 
      203.01       167.87        47.54       248.61       103.56       136.44 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24       122.73         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
      138.77        12.59        26.37       131.08        61.05        44.05 
TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 
       33.21        80.48       216.92        48.59       228.59        20.91 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZH 
        7.76        27.68        48.85        53.52        15.45        32.71 
TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY 
      101.26        11.41       148.77        53.16        49.48        27.06 
TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU 
       77.79        50.14        12.43        49.45        22.98        47.54 
TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        10.09        62.76        32.48        39.58 

$`DEL PEAK 11(9P23) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D9-A148 TCGA-D9-A1JW TCGA-DA-A1I0 TCGA-DA-A1I7 TCGA-DA-A1IB 
      121.22       148.31         2.70        20.38        61.18        23.44 
TCGA-DA-A3F2 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A29A 
       28.60       215.44        15.68         8.65        26.86        63.32 
TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29R TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2GH 
       32.19        44.35        14.47        78.94        24.43       182.01 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GT TCGA-EE-A2M7 TCGA-EE-A2MC TCGA-EE-A2ME 
       89.33        54.71        19.56        28.80        61.51       103.27 
TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AC 
      103.17        96.23        43.23        41.59        53.26        25.84 
TCGA-ER-A19J TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZE 
        6.41        79.99        80.32       202.62        28.08        40.27 
TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZU TCGA-FS-A1ZZ 
        9.70        47.38        23.93        74.73        26.56        27.02 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A267 
        0.20        76.41       120.46        84.72        64.41 

  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                       2.56                        0.20 
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                     345.96                      215.44 
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                      47.84                       44.35 
[1] "2.6 - 346.0 (47.8)" "0.2 - 215.4 (44.4)"
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A1Q7                  TCGA-D3-A3C6 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3CC                  TCGA-D3-A3MO 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3MV                  TCGA-D9-A148 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D9-A149                  TCGA-D9-A1JW 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D9-A1JX                  TCGA-D9-A3Z1 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A3Z3                  TCGA-DA-A1HV 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1HW                  TCGA-DA-A1HY 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I0                  TCGA-DA-A1I1 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I2                  TCGA-DA-A1I4 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I5                  TCGA-DA-A1I7 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A1I8                  TCGA-DA-A1IA 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1IB                  TCGA-DA-A1IC 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A3F2                  TCGA-DA-A3F3 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A3F5                  TCGA-DA-A3F8 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A17X                  TCGA-EE-A17Z 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A181                  TCGA-EE-A182 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A183                  TCGA-EE-A185 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A20B                  TCGA-EE-A20F 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A20H                  TCGA-EE-A29A 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29C                  TCGA-EE-A29D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29E                  TCGA-EE-A29H 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29L                  TCGA-EE-A29M 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29N                  TCGA-EE-A29P 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29Q                  TCGA-EE-A29R 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A29S                  TCGA-EE-A29T 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29V                  TCGA-EE-A29X 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2A0                  TCGA-EE-A2A1 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2A2                  TCGA-EE-A2A5 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2A6                  TCGA-EE-A2GB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GC                  TCGA-EE-A2GD 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GE                  TCGA-EE-A2GH 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GI                  TCGA-EE-A2GJ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GK                  TCGA-EE-A2GL 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GM                  TCGA-EE-A2GN 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GO                  TCGA-EE-A2GP 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GR                  TCGA-EE-A2GS 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GT                  TCGA-EE-A2GU 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2M5                  TCGA-EE-A2M6 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2M7                  TCGA-EE-A2M8 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MC                  TCGA-EE-A2MD 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2ME                  TCGA-EE-A2MG 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MH                  TCGA-EE-A2MI 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MJ                  TCGA-EE-A2MK 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2ML                  TCGA-EE-A2MM 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MN                  TCGA-EE-A2MP 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MQ                  TCGA-EE-A2MR 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MS                  TCGA-EE-A2MT 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MU                  TCGA-EE-A3AA 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AB                  TCGA-EE-A3AC 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A3AD                  TCGA-EE-A3AE 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AF                  TCGA-EE-A3AG 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AH                  TCGA-ER-A19D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19F                  TCGA-ER-A19J 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-ER-A19L                  TCGA-ER-A19M 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19N                  TCGA-ER-A1A1 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-ER-A3ET                  TCGA-ER-A3PL 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FR-A3YN                  TCGA-FS-A1YW 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZD                  TCGA-FS-A1ZE 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZF                  TCGA-FS-A1ZG 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZH                  TCGA-FS-A1ZJ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZK                  TCGA-FS-A1ZM 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZP                  TCGA-FS-A1ZR 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
[1] "hr=" "1"  
D35V2, continuous
D35V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 11(9P23) MUTATED     46   65
  DEL PEAK 11(9P23) WILD-TYPE   16   31
        clus
vv       DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE
  FEMALE                        46                          16
  MALE                          65                          31
                             vv
clus                          M0 M1 M1A M1B M1C
  DEL PEAK 11(9P23) MUTATED   94  0   1   0   2
  DEL PEAK 11(9P23) WILD-TYPE 40  2   1   1   0
D35V4, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 11(9P23) MUTATED   61  1   4  11  1   1   5   5  7  2
  DEL PEAK 11(9P23) WILD-TYPE 26  1   3   2  0   2   5   0  5  0
D35V5, multiclass
D35V6, continuous
                             vv
clus                          STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 11(9P23) MUTATED         9        5        9       14         7
  DEL PEAK 11(9P23) WILD-TYPE       8        4        4        4         1
                             vv
clus                          STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 11(9P23) MUTATED           7         6         6          2
  DEL PEAK 11(9P23) WILD-TYPE         2         2         1          4
                             vv
clus                          STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 11(9P23) MUTATED           13         12        3
  DEL PEAK 11(9P23) WILD-TYPE          4          6        2
D35V7, multiclass

Clustering(36) Variable = Del Peak 12(9p21.3) mutation analysis
D36V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 12(9P21.3) MUTATED   65 57
  DEL PEAK 12(9P21.3) WILD-TYPE 16 16
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                          122                            32 
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                           57                            16 
$`DEL PEAK 12(9P21.3) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
       58.03        71.24         9.30        21.47       148.31        49.74 
TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
        6.38        11.34         3.22        48.89        36.03       117.17 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A181 
       65.92        68.09        10.49       215.44        29.82        33.73 
TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       14.70         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N 
       47.84        13.97        39.62        32.19         2.56        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       17.92        46.82        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GL TCGA-EE-A2GM 
      314.53       135.91       182.01        22.55        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU 
       90.94       101.95        13.87        14.30        55.59        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2MH TCGA-EE-A2MI 
       21.67       129.24        19.76        47.28        16.96       204.62 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR 
      144.76       203.01       167.87        47.54       248.61       103.56 
TCGA-EE-A2MS TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
      136.44         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW 
      131.08        61.05        44.05        33.21        80.48       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
       48.59       228.59       202.62        20.91         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZW 
       47.38       101.26        11.41       148.77        53.16        49.48 
TCGA-FS-A1ZY TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 
       27.06        77.79        50.14        12.43        49.45         0.20 
TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 
       22.98        47.54       117.93        84.72        10.09        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

$`DEL PEAK 12(9P21.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D9-A1JW TCGA-DA-A1I0 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F8 
      121.22         2.70        20.38        23.44        28.60        15.68 
TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A29M TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2GJ 
        8.65        26.86        44.35        78.94        24.43        89.33 
TCGA-EE-A2GK TCGA-EE-A2GT TCGA-EE-A2M7 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
       54.71        19.56        28.80        61.51       103.27       103.17 
TCGA-EE-A2MJ TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A2MU TCGA-ER-A1A1 TCGA-ER-A3ET 
       96.23        43.23        41.59        53.26        79.99        80.32 
TCGA-FS-A1Z4 TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZU TCGA-FS-A1ZZ TCGA-GN-A261 
       28.08        23.93        74.73        26.56        27.02        76.41 
TCGA-GN-A262 TCGA-GN-A267 
      120.46        64.41 

  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                          0.2                           2.7 
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                       345.96                        121.22 
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                        47.69                         43.79 
[1] "0.2 - 346.0 (47.7)" "2.7 - 121.2 (43.8)"
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A1Q7                    TCGA-D3-A3C6 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3CC                    TCGA-D3-A3MO 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3MV                    TCGA-D9-A148 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A149                    TCGA-D9-A1JW 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D9-A1JX                    TCGA-D9-A3Z1 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A3Z3                    TCGA-DA-A1HV 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1HW                    TCGA-DA-A1HY 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I0                    TCGA-DA-A1I1 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I2                    TCGA-DA-A1I4 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I5                    TCGA-DA-A1I7 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I8                    TCGA-DA-A1IA 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1IB                    TCGA-DA-A1IC 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A3F2                    TCGA-DA-A3F3 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A3F5                    TCGA-DA-A3F8 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A17X                    TCGA-EE-A17Z 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A181                    TCGA-EE-A182 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A183                    TCGA-EE-A185 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A20B                    TCGA-EE-A20F 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A20H                    TCGA-EE-A29A 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29C                    TCGA-EE-A29D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29E                    TCGA-EE-A29H 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29L                    TCGA-EE-A29M 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A29N                    TCGA-EE-A29P 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29Q                    TCGA-EE-A29R 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29S                    TCGA-EE-A29T 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29V                    TCGA-EE-A29X 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2A0                    TCGA-EE-A2A1 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2A2                    TCGA-EE-A2A5 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2A6                    TCGA-EE-A2GB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GC                    TCGA-EE-A2GD 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GE                    TCGA-EE-A2GH 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GI                    TCGA-EE-A2GJ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2GK                    TCGA-EE-A2GL 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GM                    TCGA-EE-A2GN 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GO                    TCGA-EE-A2GP 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GR                    TCGA-EE-A2GS 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GT                    TCGA-EE-A2GU 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2M5                    TCGA-EE-A2M6 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2M7                    TCGA-EE-A2M8 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MC                    TCGA-EE-A2MD 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2ME                    TCGA-EE-A2MG 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MH                    TCGA-EE-A2MI 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MJ                    TCGA-EE-A2MK 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2ML                    TCGA-EE-A2MM 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MN                    TCGA-EE-A2MP 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MQ                    TCGA-EE-A2MR 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MS                    TCGA-EE-A2MT 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MU                    TCGA-EE-A3AA 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AB                    TCGA-EE-A3AC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AD                    TCGA-EE-A3AE 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AF                    TCGA-EE-A3AG 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AH                    TCGA-ER-A19D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19F                    TCGA-ER-A19J 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19L                    TCGA-ER-A19M 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19N                    TCGA-ER-A1A1 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-ER-A3ET                    TCGA-ER-A3PL 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FR-A3YN                    TCGA-FS-A1YW 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZD                    TCGA-FS-A1ZE 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZF                    TCGA-FS-A1ZG 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZH                    TCGA-FS-A1ZJ 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZK                    TCGA-FS-A1ZM 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZP                    TCGA-FS-A1ZR 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
[1] "hr=" "1.3"
D36V2, continuous
D36V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 12(9P21.3) MUTATED     52   74
  DEL PEAK 12(9P21.3) WILD-TYPE   10   22
        clus
vv       DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE
  FEMALE                          52                            10
  MALE                            74                            22
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK 12(9P21.3) MUTATED   104   2   1   1   2
  DEL PEAK 12(9P21.3) WILD-TYPE  30   0   1   0   0
D36V4, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 12(9P21.3) MUTATED   67  1   5  12  1   1   7   5 10  2
  DEL PEAK 12(9P21.3) WILD-TYPE 20  1   2   1  0   2   3   0  2  0
D36V5, multiclass
D36V6, continuous
                               vv
clus                            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 12(9P21.3) MUTATED        11        7        9       14         7
  DEL PEAK 12(9P21.3) WILD-TYPE       6        2        4        4         1
                               vv
clus                            STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 12(9P21.3) MUTATED           7         7         6          3
  DEL PEAK 12(9P21.3) WILD-TYPE         2         1         1          3
                               vv
clus                            STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 12(9P21.3) MUTATED           14         15        5
  DEL PEAK 12(9P21.3) WILD-TYPE          3          3        0
D36V7, multiclass

Clustering(37) Variable = Del Peak 13(10p15.3) mutation analysis
D37V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 13(10P15.3) MUTATED   38 42
  DEL PEAK 13(10P15.3) WILD-TYPE 43 31
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                            80                             74 
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                            42                             31 
$`DEL PEAK 13(10P15.3) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1HY 
      121.22         9.30        21.47         3.22        36.03       117.17 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A3F5 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A185 TCGA-EE-A20B 
       65.92       215.44         8.65        33.73         4.93       109.64 
TCGA-EE-A20H TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
      168.26        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A2 TCGA-EE-A2A5 
       37.35        55.89       345.96        17.92        24.43        39.25 
TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2GN 
       47.54       135.91        22.55        89.33        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2M6 TCGA-EE-A2M7 
      101.95        13.87        14.30        55.59       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM 
       19.76       103.17        16.96       204.62       144.76       167.87 
TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE 
      136.44        53.26         4.24       122.73         3.68        26.73 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19L TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN 
      138.77        12.59       131.08        80.32        33.21        80.48 
TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZD 
       48.59       202.62        20.91         7.76        27.68        53.52 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZR 
       15.45         9.70        32.71        47.38       101.26        11.41 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 
       26.56        49.48        27.06       117.93        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A 
       62.76        32.48 

$`DEL PEAK 13(10P15.3) WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
       58.03        71.24       148.31        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1I0 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
       11.34        48.89        20.38        23.44        68.09        28.60 
TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20F 
       10.49        15.68        29.82        14.70        26.86        78.87 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29R TCGA-EE-A29V 
       63.32        47.84        13.97        39.62        14.47        25.87 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GH 
       46.82        78.94        58.75        43.23       314.53       182.01 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2MC 
       54.71        55.00        19.56        67.13        21.67        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP 
       47.28       103.27        96.23       203.01        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AC TCGA-EE-A3AF TCGA-EE-A3AG 
       43.23       103.56        41.59        25.84        13.81        23.47 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW 
       26.37         6.41        61.05        44.05        79.99       216.92 
TCGA-FS-A1YY TCGA-FS-A1Z4 TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZK TCGA-FS-A1ZP 
      228.59        28.08        48.85        40.27        23.93        74.73 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 
      148.77        53.16        27.02        77.79        50.14        12.43 
TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 
       49.45         0.20        22.98        47.54        76.41       120.46 
TCGA-GN-A265 TCGA-GN-A26D 
       84.72        39.58 

  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                          2.56                           0.20 
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                        345.96                         314.53 
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                        48.065                         47.540 
[1] "2.6 - 346.0 (48.1)" "0.2 - 314.5 (47.5)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
[1] "hr=" "1.2"
D37V2, continuous
D37V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 13(10P15.3) MUTATED     35   47
  DEL PEAK 13(10P15.3) WILD-TYPE   27   49
        clus
vv       DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE
  FEMALE                           35                             27
  MALE                             47                             49
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 13(10P15.3) MUTATED   70  0   1   0   2
  DEL PEAK 13(10P15.3) WILD-TYPE 64  2   1   1   0
D37V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 13(10P15.3) MUTATED   45  1   6   5  0   1   4   4  6  1
  DEL PEAK 13(10P15.3) WILD-TYPE 42  1   1   8  1   2   6   1  6  1
D37V5, multiclass
D37V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 13(10P15.3) MUTATED         7        6        7       10         3
  DEL PEAK 13(10P15.3) WILD-TYPE      10        3        6        8         5
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 13(10P15.3) MUTATED           5         4         3          4
  DEL PEAK 13(10P15.3) WILD-TYPE         4         4         4          2
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 13(10P15.3) MUTATED           10          9        3
  DEL PEAK 13(10P15.3) WILD-TYPE          7          9        2
D37V7, multiclass

Clustering(38) Variable = Del Peak 14(10q23.31) mutation analysis
D38V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 14(10Q23.31) MUTATED   49 44
  DEL PEAK 14(10Q23.31) WILD-TYPE 32 29
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                             93                              61 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                             44                              29 
$`DEL PEAK 14(10Q23.31) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1I1 TCGA-DA-A1I2 
       49.74         6.38         3.22        36.03       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A3F5 
       35.93       107.34        61.18        53.92        65.92       215.44 
TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
       15.68         8.65        33.73         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P 
      168.26        13.97        32.19         2.56        44.35        56.42 
TCGA-EE-A29Q TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2A5 
       37.35       345.96        17.92        46.82        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI 
       58.75        47.54        43.23       314.53       135.91        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       89.33        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MD 
       55.59        67.13       129.24        28.80        19.76        47.28 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MP 
      103.17        16.96       204.62       144.76       167.87       248.61 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
       53.26         4.24       122.73         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19L TCGA-ER-A3PL TCGA-FR-A3YN 
       23.47       138.77        12.59       131.08        33.21        80.48 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZD 
      228.59       202.62        20.91         7.76        27.68        53.52 
TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZU 
       15.45        32.71        47.38       101.26        11.41        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A264 
       49.48        27.06         0.20        47.54       120.46       117.93 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
       10.09        64.41        32.48 

$`DEL PEAK 14(10Q23.31) WILD-TYPE`
TCGA-D9-A1JW TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1IB 
        2.70        11.34        48.89       117.17        20.38        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 
       68.09        28.60        10.49        29.82        14.70        26.86 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29S 
       63.32        47.84        39.62        18.58        14.47        55.89 
TCGA-EE-A29V TCGA-EE-A2A1 TCGA-EE-A2GH TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GT 
       25.87        78.94       182.01        54.71        55.00        19.56 
TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MN 
       21.67        61.51       103.27        96.23       203.01        47.54 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AC TCGA-ER-A19F 
       43.23       103.56       136.44        41.59        25.84        26.37 
TCGA-ER-A19J TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41        61.05        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1Z4 TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZK 
       48.59        28.08        48.85        40.27         9.70        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 
       74.73       148.77        53.16        27.02        77.79        50.14 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A265 TCGA-GN-A268 
       12.43        49.45        22.98        76.41        84.72        62.76 
TCGA-GN-A26D 
       39.58 

  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                            0.2                             2.7 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                         345.96                          216.92 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                          47.54                           47.84 
[1] "0.2 - 346.0 (47.5)" "2.7 - 216.9 (47.8)"
                     TCGA-D3-A1Q7                      TCGA-D3-A3C6 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3CC                      TCGA-D3-A3MO 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3MV                      TCGA-D9-A148 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A149                      TCGA-D9-A1JW 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D9-A1JX                      TCGA-D9-A3Z1 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D9-A3Z3                      TCGA-DA-A1HV 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1HW                      TCGA-DA-A1HY 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1I0                      TCGA-DA-A1I1 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I2                      TCGA-DA-A1I4 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I5                      TCGA-DA-A1I7 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I8                      TCGA-DA-A1IA 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1IB                      TCGA-DA-A1IC 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A3F2                      TCGA-DA-A3F3 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A3F5                      TCGA-DA-A3F8 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A17X                      TCGA-EE-A17Z 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A181                      TCGA-EE-A182 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A183                      TCGA-EE-A185 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A20B                      TCGA-EE-A20F 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A20H                      TCGA-EE-A29A 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29C                      TCGA-EE-A29D 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29E                      TCGA-EE-A29H 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29L                      TCGA-EE-A29M 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29N                      TCGA-EE-A29P 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29Q                      TCGA-EE-A29R 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29S                      TCGA-EE-A29T 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29V                      TCGA-EE-A29X 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A0                      TCGA-EE-A2A1 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2A2                      TCGA-EE-A2A5 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A6                      TCGA-EE-A2GB 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GC                      TCGA-EE-A2GD 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GE                      TCGA-EE-A2GH 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GI                      TCGA-EE-A2GJ 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GK                      TCGA-EE-A2GL 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GM                      TCGA-EE-A2GN 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GO                      TCGA-EE-A2GP 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GR                      TCGA-EE-A2GS 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GT                      TCGA-EE-A2GU 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2M5                      TCGA-EE-A2M6 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2M7                      TCGA-EE-A2M8 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MC                      TCGA-EE-A2MD 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2ME                      TCGA-EE-A2MG 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MH                      TCGA-EE-A2MI 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MJ                      TCGA-EE-A2MK 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2ML                      TCGA-EE-A2MM 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MN                      TCGA-EE-A2MP 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MQ                      TCGA-EE-A2MR 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MS                      TCGA-EE-A2MT 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MU                      TCGA-EE-A3AA 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AB                      TCGA-EE-A3AC 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A3AD                      TCGA-EE-A3AE 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AF                      TCGA-EE-A3AG 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AH                      TCGA-ER-A19D 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-ER-A19F                      TCGA-ER-A19J 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A19L                      TCGA-ER-A19M 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A19N                      TCGA-ER-A1A1 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A3ET                      TCGA-ER-A3PL 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FR-A3YN                      TCGA-FS-A1YW 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZD                      TCGA-FS-A1ZE 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZF                      TCGA-FS-A1ZG 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZH                      TCGA-FS-A1ZJ 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZK                      TCGA-FS-A1ZM 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZP                      TCGA-FS-A1ZR 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D3-A1Q7                      TCGA-D3-A3C6 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3CC                      TCGA-D3-A3MO 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3MV                      TCGA-D9-A148 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A149                      TCGA-D9-A1JW 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D9-A1JX                      TCGA-D9-A3Z1 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D9-A3Z3                      TCGA-DA-A1HV 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1HW                      TCGA-DA-A1HY 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1I0                      TCGA-DA-A1I1 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I2                      TCGA-DA-A1I4 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I5                      TCGA-DA-A1I7 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I8                      TCGA-DA-A1IA 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1IB                      TCGA-DA-A1IC 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A3F2                      TCGA-DA-A3F3 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A3F5                      TCGA-DA-A3F8 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A17X                      TCGA-EE-A17Z 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A181                      TCGA-EE-A182 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A183                      TCGA-EE-A185 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A20B                      TCGA-EE-A20F 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A20H                      TCGA-EE-A29A 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29C                      TCGA-EE-A29D 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29E                      TCGA-EE-A29H 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29L                      TCGA-EE-A29M 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29N                      TCGA-EE-A29P 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29Q                      TCGA-EE-A29R 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29S                      TCGA-EE-A29T 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29V                      TCGA-EE-A29X 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A0                      TCGA-EE-A2A1 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2A2                      TCGA-EE-A2A5 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A6                      TCGA-EE-A2GB 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GC                      TCGA-EE-A2GD 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GE                      TCGA-EE-A2GH 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GI                      TCGA-EE-A2GJ 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GK                      TCGA-EE-A2GL 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GM                      TCGA-EE-A2GN 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GO                      TCGA-EE-A2GP 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GR                      TCGA-EE-A2GS 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GT                      TCGA-EE-A2GU 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2M5                      TCGA-EE-A2M6 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2M7                      TCGA-EE-A2M8 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MC                      TCGA-EE-A2MD 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2ME                      TCGA-EE-A2MG 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MH                      TCGA-EE-A2MI 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MJ                      TCGA-EE-A2MK 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2ML                      TCGA-EE-A2MM 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MN                      TCGA-EE-A2MP 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MQ                      TCGA-EE-A2MR 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MS                      TCGA-EE-A2MT 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MU                      TCGA-EE-A3AA 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AB                      TCGA-EE-A3AC 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A3AD                      TCGA-EE-A3AE 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AF                      TCGA-EE-A3AG 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AH                      TCGA-ER-A19D 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-ER-A19F                      TCGA-ER-A19J 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A19L                      TCGA-ER-A19M 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A19N                      TCGA-ER-A1A1 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A3ET                      TCGA-ER-A3PL 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FR-A3YN                      TCGA-FS-A1YW 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZD                      TCGA-FS-A1ZE 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZF                      TCGA-FS-A1ZG 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZH                      TCGA-FS-A1ZJ 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZK                      TCGA-FS-A1ZM 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZP                      TCGA-FS-A1ZR 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D3-A1Q7                      TCGA-D3-A3C6 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3CC                      TCGA-D3-A3MO 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3MV                      TCGA-D9-A148 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A149                      TCGA-D9-A1JW 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D9-A1JX                      TCGA-D9-A3Z1 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D9-A3Z3                      TCGA-DA-A1HV 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1HW                      TCGA-DA-A1HY 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1I0                      TCGA-DA-A1I1 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I2                      TCGA-DA-A1I4 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I5                      TCGA-DA-A1I7 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I8                      TCGA-DA-A1IA 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1IB                      TCGA-DA-A1IC 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A3F2                      TCGA-DA-A3F3 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A3F5                      TCGA-DA-A3F8 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A17X                      TCGA-EE-A17Z 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A181                      TCGA-EE-A182 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A183                      TCGA-EE-A185 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A20B                      TCGA-EE-A20F 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A20H                      TCGA-EE-A29A 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29C                      TCGA-EE-A29D 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29E                      TCGA-EE-A29H 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29L                      TCGA-EE-A29M 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29N                      TCGA-EE-A29P 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29Q                      TCGA-EE-A29R 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29S                      TCGA-EE-A29T 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29V                      TCGA-EE-A29X 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A0                      TCGA-EE-A2A1 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2A2                      TCGA-EE-A2A5 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A6                      TCGA-EE-A2GB 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GC                      TCGA-EE-A2GD 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GE                      TCGA-EE-A2GH 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GI                      TCGA-EE-A2GJ 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GK                      TCGA-EE-A2GL 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GM                      TCGA-EE-A2GN 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GO                      TCGA-EE-A2GP 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GR                      TCGA-EE-A2GS 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GT                      TCGA-EE-A2GU 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2M5                      TCGA-EE-A2M6 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2M7                      TCGA-EE-A2M8 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MC                      TCGA-EE-A2MD 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2ME                      TCGA-EE-A2MG 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MH                      TCGA-EE-A2MI 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MJ                      TCGA-EE-A2MK 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2ML                      TCGA-EE-A2MM 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MN                      TCGA-EE-A2MP 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MQ                      TCGA-EE-A2MR 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MS                      TCGA-EE-A2MT 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MU                      TCGA-EE-A3AA 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AB                      TCGA-EE-A3AC 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A3AD                      TCGA-EE-A3AE 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AF                      TCGA-EE-A3AG 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AH                      TCGA-ER-A19D 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-ER-A19F                      TCGA-ER-A19J 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A19L                      TCGA-ER-A19M 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A19N                      TCGA-ER-A1A1 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A3ET                      TCGA-ER-A3PL 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FR-A3YN                      TCGA-FS-A1YW 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZD                      TCGA-FS-A1ZE 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZF                      TCGA-FS-A1ZG 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZH                      TCGA-FS-A1ZJ 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZK                      TCGA-FS-A1ZM 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZP                      TCGA-FS-A1ZR 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
[1] "hr=" "1.2"
D38V2, continuous
D38V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 14(10Q23.31) MUTATED     45   51
  DEL PEAK 14(10Q23.31) WILD-TYPE   17   45
        clus
vv       DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE
  FEMALE                            45                              17
  MALE                              51                              45
                                 vv
clus                              M0 M1 M1A M1B M1C
  DEL PEAK 14(10Q23.31) MUTATED   78  1   1   1   2
  DEL PEAK 14(10Q23.31) WILD-TYPE 56  1   1   0   0
D38V4, multiclass
                                 vv
clus                              N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 14(10Q23.31) MUTATED   52  1   5   7  0   1   5   4  6  2
  DEL PEAK 14(10Q23.31) WILD-TYPE 35  1   2   6  1   2   5   1  6  0
D38V5, multiclass
D38V6, continuous
                                 vv
clus                              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 14(10Q23.31) MUTATED         7        8        8       11         4
  DEL PEAK 14(10Q23.31) WILD-TYPE      10        1        5        7         4
                                 vv
clus                              STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 14(10Q23.31) MUTATED           6         5         4          3
  DEL PEAK 14(10Q23.31) WILD-TYPE         3         3         3          3
                                 vv
clus                              STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 14(10Q23.31) MUTATED           11          8        4
  DEL PEAK 14(10Q23.31) WILD-TYPE          6         10        1
D38V7, multiclass

Clustering(39) Variable = Del Peak 15(10q26.3) mutation analysis
D39V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 15(10Q26.3) MUTATED   49 44
  DEL PEAK 15(10Q26.3) WILD-TYPE 32 29
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                            93                             61 
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                            44                             29 
$`DEL PEAK 15(10Q26.3) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 
       49.74         3.22        36.03       117.17       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A3F5 
       35.93       107.34        61.18        53.92        65.92       215.44 
TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
       15.68         8.65        33.73         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29Q 
      168.26        13.97        32.19        44.35        56.42        37.35 
TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
      345.96        17.92        46.82        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ 
       47.54        43.23       314.53       135.91        22.55        89.33 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MD 
       67.13        21.67       129.24        28.80        19.76        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM 
      103.27       103.17        16.96       204.62       144.76       167.87 
TCGA-EE-A2MP TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE 
      248.61        53.26         4.24       122.73         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19L TCGA-ER-A3ET 
       13.81        23.47       138.77        12.59       131.08        80.32 
TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       33.21        80.48        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM 
        7.76        27.68        15.45        32.71        47.38       101.26 
TCGA-FS-A1ZR TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3TU TCGA-GN-A262 
       11.41        26.56        49.48        27.06        47.54       120.46 
TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A26A 
      117.93        10.09        32.48 

$`DEL PEAK 15(10Q26.3) WILD-TYPE`
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1I0 TCGA-DA-A1IB 
        2.70         6.38        11.34        48.89        20.38        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 
       68.09        28.60        10.49        29.82        14.70        26.86 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29R 
       63.32        47.84        39.62         2.56        18.58        14.47 
TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A2A1 TCGA-EE-A2GH TCGA-EE-A2GK TCGA-EE-A2GL 
       55.89        25.87        78.94       182.01        54.71        55.00 
TCGA-EE-A2GT TCGA-EE-A2MC TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MQ 
       19.56        61.51        96.23       203.01        47.54        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AC TCGA-ER-A19F TCGA-ER-A19J 
      103.56       136.44        41.59        25.84        26.37         6.41 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1Z4 TCGA-FS-A1ZB 
       61.05        44.05        79.99       216.92        28.08        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZS 
       53.52        40.27         9.70        23.93        74.73       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       53.16        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
        0.20        22.98        76.41        84.72        64.41        62.76 
TCGA-GN-A26D 
       39.58 

  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                          3.22                           0.20 
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                        345.96                         216.92 
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                         48.59                          44.05 
[1] "3.2 - 346.0 (48.6)" "0.2 - 216.9 (44.0)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
[1] "hr=" "1.3"
D39V2, continuous
D39V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 15(10Q26.3) MUTATED     45   51
  DEL PEAK 15(10Q26.3) WILD-TYPE   17   45
        clus
vv       DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE
  FEMALE                           45                             17
  MALE                             51                             45
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 15(10Q26.3) MUTATED   79  0   1   1   2
  DEL PEAK 15(10Q26.3) WILD-TYPE 55  2   1   0   0
D39V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 15(10Q26.3) MUTATED   53  1   5   7  0   1   5   4  6  1
  DEL PEAK 15(10Q26.3) WILD-TYPE 34  1   2   6  1   2   5   1  6  1
D39V5, multiclass
D39V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 15(10Q26.3) MUTATED        10        8        8       11         3
  DEL PEAK 15(10Q26.3) WILD-TYPE       7        1        5        7         5
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 15(10Q26.3) MUTATED           6         5         4          3
  DEL PEAK 15(10Q26.3) WILD-TYPE         3         3         3          3
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 15(10Q26.3) MUTATED           11          8        3
  DEL PEAK 15(10Q26.3) WILD-TYPE          6         10        2
D39V7, multiclass

Clustering(40) Variable = Del Peak 16(11q23.3) mutation analysis
D40V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 16(11Q23.3) MUTATED   52 39
  DEL PEAK 16(11Q23.3) WILD-TYPE 29 34
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                            91                             63 
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                            39                             34 
$`DEL PEAK 16(11Q23.3) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW 
       49.74         2.70         6.38         3.22        48.89        36.03 
TCGA-DA-A1I1 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A3F3 TCGA-DA-A3F5 
      194.83       107.34        53.92        65.92        10.49       215.44 
TCGA-EE-A182 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
       14.70       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q 
       13.97        32.19         2.56        44.35        18.58        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A2 TCGA-EE-A2A5 
       14.47        55.89       345.96        25.87        24.43        39.25 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GM 
       47.54        43.23       135.91        22.55        89.33        75.48 
TCGA-EE-A2GR TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2MJ 
       14.30        67.13       129.24        61.51        47.28        96.23 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A2MT 
      203.01       167.87        47.54       248.61       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-ER-A19D 
       53.26       122.73         3.68        26.73        23.47        12.59 
TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET TCGA-ER-A3PL 
       26.37       131.08        61.05        44.05        80.32        33.21 
TCGA-FR-A3YN TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
       80.48       202.62        20.91         7.76        27.68        48.85 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZT 
       40.27        15.45        32.71        47.38       101.26        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-FW-A3TU 
       26.56        49.48        27.06        27.02         0.20        47.54 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      120.46       117.93        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

$`DEL PEAK 16(11Q23.3) WILD-TYPE`
TCGA-D9-A3Z1 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 
       11.34       117.17        20.38       176.55        35.93        61.18 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       23.44        68.09        28.60        15.68        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A29E TCGA-EE-A29P TCGA-EE-A29X 
       33.73        26.86         4.93        39.62        56.42        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A6 TCGA-EE-A2GD TCGA-EE-A2GH TCGA-EE-A2GK 
       46.82        78.94        58.75       314.53       182.01        54.71 
TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        90.94       101.95        13.87        55.59        19.56 
TCGA-EE-A2M5 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       21.67        28.80        19.76       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A3AA TCGA-EE-A3AC 
      204.62       144.76        43.23       103.56         4.24        25.84 
TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19J TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YX 
       13.81       138.77         6.41        79.99       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z4 TCGA-FS-A1ZD TCGA-FS-A1ZG TCGA-FS-A1ZK TCGA-FS-A1ZP 
      228.59        28.08        53.52         9.70        23.93        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       11.41       148.77        77.79        50.14        12.43        49.45 
TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A265 
       22.98        76.41        84.72 

  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                          0.20                           4.24 
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                        345.96                         314.53 
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                         47.54                          48.59 
[1] "0.2 - 346.0 (47.5)" "4.2 - 314.5 (48.6)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
[1] "hr=" "1.2"
D40V2, continuous
D40V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 16(11Q23.3) MUTATED     39   54
  DEL PEAK 16(11Q23.3) WILD-TYPE   23   42
        clus
vv       DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE
  FEMALE                           39                             23
  MALE                             54                             42
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 16(11Q23.3) MUTATED   76  1   1   1   2
  DEL PEAK 16(11Q23.3) WILD-TYPE 58  1   1   0   0
D40V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 16(11Q23.3) MUTATED   49  0   6  12  0   2   2   4  5  2
  DEL PEAK 16(11Q23.3) WILD-TYPE 38  2   1   1  1   1   8   1  7  0
D40V5, multiclass
D40V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 16(11Q23.3) MUTATED         8        7        9        8         1
  DEL PEAK 16(11Q23.3) WILD-TYPE       9        2        4       10         7
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 16(11Q23.3) MUTATED           5         6         3          5
  DEL PEAK 16(11Q23.3) WILD-TYPE         4         2         4          1
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 16(11Q23.3) MUTATED           10          9        4
  DEL PEAK 16(11Q23.3) WILD-TYPE          7          9        1
D40V7, multiclass

Clustering(41) Variable = Del Peak 17(12p13.31) mutation analysis
D41V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 17(12P13.31) MUTATED   13  8
  DEL PEAK 17(12P13.31) WILD-TYPE 68 65
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                             21                             133 
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                              8                              65 
$`DEL PEAK 17(12P13.31) MUTATED`
TCGA-DA-A1HV TCGA-DA-A1I1 TCGA-EE-A20B TCGA-EE-A29Q TCGA-EE-A29V TCGA-EE-A2A2 
       48.89       194.83       109.64        37.35        25.87        24.43 
TCGA-EE-A2GP TCGA-EE-A2MG TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A2MS 
       13.87       103.17       144.76       167.87       248.61       136.44 
TCGA-EE-A2MU TCGA-EE-A3AE TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZH TCGA-FS-A1ZT 
       53.26        26.73        28.08        27.68        32.71        53.16 
TCGA-FW-A3R5 TCGA-GN-A266 TCGA-GN-A26D 
       22.98        10.09        39.58 

$`DEL PEAK 17(12P13.31) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HW 
       49.74         2.70         6.38        11.34         3.22        36.03 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
      117.17        20.38       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
       26.86         4.93        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 
       56.42        14.47        55.89       345.96        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       78.94        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       75.48        90.94       101.95        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       67.13        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML 
       47.28       103.27        16.96       204.62        96.23       203.01 
TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AB 
       47.54        43.23       103.56        41.59         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
       25.84         3.68        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 
       26.37         6.41       131.08        61.05        44.05        79.99 
TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       80.32        33.21        80.48       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
      202.62        20.91         7.76        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
       11.41       148.77        26.56        49.48        27.06        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3TU 
       77.79        50.14        12.43        49.45         0.20        47.54 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        64.41        62.76 
TCGA-GN-A26A 
       32.48 

  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                          10.09                            0.20 
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                         248.61                          345.96 
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                          39.58                           47.54 
[1] "10.1 - 248.6 (39.6)" "0.2 - 346.0 (47.5)" 
                     TCGA-D3-A1Q7                      TCGA-D3-A3C6 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3CC                      TCGA-D3-A3MO 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3MV                      TCGA-D9-A148 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A149                      TCGA-D9-A1JW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A1JX                      TCGA-D9-A3Z1 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A3Z3                      TCGA-DA-A1HV 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-DA-A1HW                      TCGA-DA-A1HY 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I0                      TCGA-DA-A1I1 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-DA-A1I2                      TCGA-DA-A1I4 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I5                      TCGA-DA-A1I7 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I8                      TCGA-DA-A1IA 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1IB                      TCGA-DA-A1IC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F2                      TCGA-DA-A3F3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F5                      TCGA-DA-A3F8 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A17X                      TCGA-EE-A17Z 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A181                      TCGA-EE-A182 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A183                      TCGA-EE-A185 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A20B                      TCGA-EE-A20F 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A20H                      TCGA-EE-A29A 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29C                      TCGA-EE-A29D 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29E                      TCGA-EE-A29H 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29L                      TCGA-EE-A29M 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29N                      TCGA-EE-A29P 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29Q                      TCGA-EE-A29R 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29S                      TCGA-EE-A29T 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29V                      TCGA-EE-A29X 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A0                      TCGA-EE-A2A1 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A2                      TCGA-EE-A2A5 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A6                      TCGA-EE-A2GB 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GC                      TCGA-EE-A2GD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GE                      TCGA-EE-A2GH 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GI                      TCGA-EE-A2GJ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GK                      TCGA-EE-A2GL 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GM                      TCGA-EE-A2GN 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GO                      TCGA-EE-A2GP 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2GR                      TCGA-EE-A2GS 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GT                      TCGA-EE-A2GU 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M5                      TCGA-EE-A2M6 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M7                      TCGA-EE-A2M8 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MC                      TCGA-EE-A2MD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2ME                      TCGA-EE-A2MG 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MH                      TCGA-EE-A2MI 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MJ                      TCGA-EE-A2MK 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2ML                      TCGA-EE-A2MM 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MN                      TCGA-EE-A2MP 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MQ                      TCGA-EE-A2MR 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MS                      TCGA-EE-A2MT 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MU                      TCGA-EE-A3AA 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AB                      TCGA-EE-A3AC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AD                      TCGA-EE-A3AE 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A3AF                      TCGA-EE-A3AG 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AH                      TCGA-ER-A19D 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19F                      TCGA-ER-A19J 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19L                      TCGA-ER-A19M 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19N                      TCGA-ER-A1A1 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A3ET                      TCGA-ER-A3PL 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FR-A3YN                      TCGA-FS-A1YW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZD                      TCGA-FS-A1ZE 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZF                      TCGA-FS-A1ZG 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZH                      TCGA-FS-A1ZJ 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZK                      TCGA-FS-A1ZM 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZP                      TCGA-FS-A1ZR 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-D3-A1Q7                      TCGA-D3-A3C6 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3CC                      TCGA-D3-A3MO 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3MV                      TCGA-D9-A148 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A149                      TCGA-D9-A1JW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A1JX                      TCGA-D9-A3Z1 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A3Z3                      TCGA-DA-A1HV 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-DA-A1HW                      TCGA-DA-A1HY 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I0                      TCGA-DA-A1I1 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-DA-A1I2                      TCGA-DA-A1I4 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I5                      TCGA-DA-A1I7 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I8                      TCGA-DA-A1IA 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1IB                      TCGA-DA-A1IC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F2                      TCGA-DA-A3F3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F5                      TCGA-DA-A3F8 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A17X                      TCGA-EE-A17Z 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A181                      TCGA-EE-A182 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A183                      TCGA-EE-A185 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A20B                      TCGA-EE-A20F 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A20H                      TCGA-EE-A29A 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29C                      TCGA-EE-A29D 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29E                      TCGA-EE-A29H 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29L                      TCGA-EE-A29M 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29N                      TCGA-EE-A29P 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29Q                      TCGA-EE-A29R 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29S                      TCGA-EE-A29T 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29V                      TCGA-EE-A29X 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A0                      TCGA-EE-A2A1 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A2                      TCGA-EE-A2A5 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A6                      TCGA-EE-A2GB 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GC                      TCGA-EE-A2GD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GE                      TCGA-EE-A2GH 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GI                      TCGA-EE-A2GJ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GK                      TCGA-EE-A2GL 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GM                      TCGA-EE-A2GN 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GO                      TCGA-EE-A2GP 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2GR                      TCGA-EE-A2GS 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GT                      TCGA-EE-A2GU 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M5                      TCGA-EE-A2M6 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M7                      TCGA-EE-A2M8 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MC                      TCGA-EE-A2MD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2ME                      TCGA-EE-A2MG 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MH                      TCGA-EE-A2MI 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MJ                      TCGA-EE-A2MK 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2ML                      TCGA-EE-A2MM 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MN                      TCGA-EE-A2MP 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MQ                      TCGA-EE-A2MR 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MS                      TCGA-EE-A2MT 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MU                      TCGA-EE-A3AA 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AB                      TCGA-EE-A3AC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AD                      TCGA-EE-A3AE 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A3AF                      TCGA-EE-A3AG 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AH                      TCGA-ER-A19D 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19F                      TCGA-ER-A19J 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19L                      TCGA-ER-A19M 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19N                      TCGA-ER-A1A1 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A3ET                      TCGA-ER-A3PL 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FR-A3YN                      TCGA-FS-A1YW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZD                      TCGA-FS-A1ZE 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZF                      TCGA-FS-A1ZG 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZH                      TCGA-FS-A1ZJ 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZK                      TCGA-FS-A1ZM 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZP                      TCGA-FS-A1ZR 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-D3-A1Q7                      TCGA-D3-A3C6 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3CC                      TCGA-D3-A3MO 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3MV                      TCGA-D9-A148 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A149                      TCGA-D9-A1JW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A1JX                      TCGA-D9-A3Z1 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A3Z3                      TCGA-DA-A1HV 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-DA-A1HW                      TCGA-DA-A1HY 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I0                      TCGA-DA-A1I1 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-DA-A1I2                      TCGA-DA-A1I4 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I5                      TCGA-DA-A1I7 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I8                      TCGA-DA-A1IA 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1IB                      TCGA-DA-A1IC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F2                      TCGA-DA-A3F3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F5                      TCGA-DA-A3F8 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A17X                      TCGA-EE-A17Z 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A181                      TCGA-EE-A182 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A183                      TCGA-EE-A185 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A20B                      TCGA-EE-A20F 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A20H                      TCGA-EE-A29A 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29C                      TCGA-EE-A29D 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29E                      TCGA-EE-A29H 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29L                      TCGA-EE-A29M 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29N                      TCGA-EE-A29P 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29Q                      TCGA-EE-A29R 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29S                      TCGA-EE-A29T 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29V                      TCGA-EE-A29X 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A0                      TCGA-EE-A2A1 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A2                      TCGA-EE-A2A5 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A6                      TCGA-EE-A2GB 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GC                      TCGA-EE-A2GD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GE                      TCGA-EE-A2GH 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GI                      TCGA-EE-A2GJ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GK                      TCGA-EE-A2GL 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GM                      TCGA-EE-A2GN 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GO                      TCGA-EE-A2GP 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2GR                      TCGA-EE-A2GS 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GT                      TCGA-EE-A2GU 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M5                      TCGA-EE-A2M6 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M7                      TCGA-EE-A2M8 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MC                      TCGA-EE-A2MD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2ME                      TCGA-EE-A2MG 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MH                      TCGA-EE-A2MI 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MJ                      TCGA-EE-A2MK 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2ML                      TCGA-EE-A2MM 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MN                      TCGA-EE-A2MP 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MQ                      TCGA-EE-A2MR 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MS                      TCGA-EE-A2MT 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MU                      TCGA-EE-A3AA 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AB                      TCGA-EE-A3AC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AD                      TCGA-EE-A3AE 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A3AF                      TCGA-EE-A3AG 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AH                      TCGA-ER-A19D 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19F                      TCGA-ER-A19J 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19L                      TCGA-ER-A19M 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19N                      TCGA-ER-A1A1 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A3ET                      TCGA-ER-A3PL 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FR-A3YN                      TCGA-FS-A1YW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZD                      TCGA-FS-A1ZE 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZF                      TCGA-FS-A1ZG 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZH                      TCGA-FS-A1ZJ 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZK                      TCGA-FS-A1ZM 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZP                      TCGA-FS-A1ZR 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
[1] "hr=" "1.4"
D41V2, continuous
D41V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 17(12P13.31) MUTATED     10   11
  DEL PEAK 17(12P13.31) WILD-TYPE   52   85
        clus
vv       DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE
  FEMALE                            10                              52
  MALE                              11                              85
                                 vv
clus                               M0  M1 M1A M1B M1C
  DEL PEAK 17(12P13.31) MUTATED    18   0   0   0   1
  DEL PEAK 17(12P13.31) WILD-TYPE 116   2   2   1   1
D41V4, multiclass
                                 vv
clus                              N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 17(12P13.31) MUTATED   11  0   1   3  1   0   1   2  1  0
  DEL PEAK 17(12P13.31) WILD-TYPE 76  2   6  10  0   3   9   3 11  2
D41V5, multiclass
D41V6, continuous
                                 vv
clus                              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 17(12P13.31) MUTATED         4        2        0        3         0
  DEL PEAK 17(12P13.31) WILD-TYPE      13        7       13       15         8
                                 vv
clus                              STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 17(12P13.31) MUTATED           1         1         2          0
  DEL PEAK 17(12P13.31) WILD-TYPE         8         7         5          6
                                 vv
clus                              STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 17(12P13.31) MUTATED            4          2        1
  DEL PEAK 17(12P13.31) WILD-TYPE         13         16        4
D41V7, multiclass

Clustering(42) Variable = Del Peak 18(12q23.3) mutation analysis
D42V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 18(12Q23.3) MUTATED   23 13
  DEL PEAK 18(12Q23.3) WILD-TYPE 58 60
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                            36                            118 
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                            13                             60 
$`DEL PEAK 18(12Q23.3) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A148 TCGA-DA-A1I1 TCGA-EE-A20B 
       58.03        71.24        21.47       148.31       194.83       109.64 
TCGA-EE-A29D TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29X TCGA-EE-A2A2 TCGA-EE-A2GP 
       13.97        37.35        55.89        17.92        24.43        13.87 
TCGA-EE-A2GR TCGA-EE-A2GU TCGA-EE-A2MG TCGA-EE-A2MK TCGA-EE-A2MP TCGA-EE-A2MS 
       14.30        67.13       103.17       144.76       248.61       136.44 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AD TCGA-EE-A3AE TCGA-ER-A3PL TCGA-FS-A1YX 
       53.26         4.24         3.68        26.73        33.21        48.59 
TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZH TCGA-FS-A1ZM TCGA-FS-A1ZT TCGA-FS-A4F2 
       28.08        27.68        32.71       101.26        53.16        50.14 
TCGA-FS-A4F9 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
       12.43        22.98        47.54        10.09        64.41        62.76 

$`DEL PEAK 18(12Q23.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
      121.22         9.30        49.74         2.70         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 
        3.22        48.89        36.03       117.17        20.38       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       68.09        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F 
        8.65        33.73        14.70        26.86         4.93        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
      168.26        63.32        47.84        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V 
       44.35        18.58        56.42        14.47       345.96        25.87 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       46.82        78.94        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        75.48        90.94       101.95        55.59        19.56 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MM 
      103.27        16.96       204.62        96.23       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AB TCGA-EE-A3AC 
       47.54        43.23       103.56        41.59       122.73        25.84 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN 
      131.08        61.05        44.05        79.99        80.32        80.48 
TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZB 
      216.92       228.59       202.62        20.91         7.76        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       53.52        40.27        15.45         9.70        47.38        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       74.73        11.41       148.77        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       27.02        77.79        49.45         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        84.72        32.48        39.58 

  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                          3.68                           0.20 
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                        248.61                         345.96 
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                        48.065                         47.540 
[1] "3.7 - 248.6 (48.1)" "0.2 - 346.0 (47.5)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
[1] "hr=" "1.3"
D42V2, continuous
D42V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 18(12Q23.3) MUTATED     16   21
  DEL PEAK 18(12Q23.3) WILD-TYPE   46   75
        clus
vv       DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE
  FEMALE                           16                             46
  MALE                             21                             75
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK 18(12Q23.3) MUTATED    29   0   1   1   1
  DEL PEAK 18(12Q23.3) WILD-TYPE 105   2   1   0   1
D42V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 18(12Q23.3) MUTATED   19  0   2   3  1   1   0   3  3  0
  DEL PEAK 18(12Q23.3) WILD-TYPE 68  2   5  10  0   2  10   2  9  2
D42V5, multiclass
D42V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 18(12Q23.3) MUTATED         4        3        2        4         1
  DEL PEAK 18(12Q23.3) WILD-TYPE      13        6       11       14         7
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 18(12Q23.3) MUTATED           2         2         3          1
  DEL PEAK 18(12Q23.3) WILD-TYPE         7         6         4          5
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 18(12Q23.3) MUTATED            4          3        2
  DEL PEAK 18(12Q23.3) WILD-TYPE         13         15        3
D42V7, multiclass

Clustering(43) Variable = Del Peak 19(12q24.33) mutation analysis
D43V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 19(12Q24.33) MUTATED   22 15
  DEL PEAK 19(12Q24.33) WILD-TYPE 59 58
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                             37                             117 
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                             15                              58 
$`DEL PEAK 19(12Q24.33) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MV TCGA-DA-A1I1 TCGA-DA-A1IA TCGA-EE-A20B TCGA-EE-A20H 
       71.24        21.47       194.83        65.92       109.64       168.26 
TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29X TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GP 
       37.35        55.89        17.92        24.43        39.25        13.87 
TCGA-EE-A2GU TCGA-EE-A2MG TCGA-EE-A2MK TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A2MU 
       67.13       103.17       144.76       248.61       136.44        53.26 
TCGA-EE-A3AA TCGA-EE-A3AD TCGA-EE-A3AE TCGA-ER-A3PL TCGA-FS-A1YX TCGA-FS-A1Z4 
        4.24         3.68        26.73        33.21        48.59        28.08 
TCGA-FS-A1ZA TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZT TCGA-FS-A4F2 
       27.68        32.71        47.38       101.26        53.16        50.14 
TCGA-FS-A4F9 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       12.43        22.98        47.54        84.72        10.09        64.41 
TCGA-GN-A268 
       62.76 

$`DEL PEAK 19(12Q24.33) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW 
      121.22        58.03         9.30       148.31        49.74         2.70 
TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
        6.38        11.34         3.22        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H 
       78.87        63.32        47.84        13.97        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29T 
        2.56        44.35        18.58        56.42        14.47       345.96 
TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       25.87        46.82        78.94        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        75.48        90.94       101.95        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       19.56        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML 
       47.28       103.27        16.96       204.62        96.23       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AB 
      167.87        47.54        43.23       103.56        41.59       122.73 
TCGA-EE-A3AC TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
       25.84        13.81        23.47       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
        6.41       131.08        61.05        44.05        79.99        80.32 
TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 
       80.48       216.92       228.59       202.62        20.91         7.76 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZK 
       48.85        53.52        40.27        15.45         9.70        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       74.73        11.41       148.77        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       27.02        77.79        49.45         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        32.48        39.58 

  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                           3.68                            0.20 
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                         248.61                          345.96 
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                          48.59                           47.54 
[1] "3.7 - 248.6 (48.6)" "0.2 - 346.0 (47.5)"
                     TCGA-D3-A1Q7                      TCGA-D3-A3C6 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3CC                      TCGA-D3-A3MO 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3MV                      TCGA-D9-A148 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A149                      TCGA-D9-A1JW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A1JX                      TCGA-D9-A3Z1 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A3Z3                      TCGA-DA-A1HV 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1HW                      TCGA-DA-A1HY 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I0                      TCGA-DA-A1I1 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-DA-A1I2                      TCGA-DA-A1I4 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I5                      TCGA-DA-A1I7 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I8                      TCGA-DA-A1IA 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-DA-A1IB                      TCGA-DA-A1IC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F2                      TCGA-DA-A3F3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F5                      TCGA-DA-A3F8 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A17X                      TCGA-EE-A17Z 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A181                      TCGA-EE-A182 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A183                      TCGA-EE-A185 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A20B                      TCGA-EE-A20F 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A20H                      TCGA-EE-A29A 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29C                      TCGA-EE-A29D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29E                      TCGA-EE-A29H 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29L                      TCGA-EE-A29M 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29N                      TCGA-EE-A29P 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29Q                      TCGA-EE-A29R 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29S                      TCGA-EE-A29T 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29V                      TCGA-EE-A29X 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2A0                      TCGA-EE-A2A1 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2A2                      TCGA-EE-A2A5 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2A6                      TCGA-EE-A2GB 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GC                      TCGA-EE-A2GD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GE                      TCGA-EE-A2GH 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GI                      TCGA-EE-A2GJ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GK                      TCGA-EE-A2GL 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GM                      TCGA-EE-A2GN 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GO                      TCGA-EE-A2GP 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2GR                      TCGA-EE-A2GS 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GT                      TCGA-EE-A2GU 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2M5                      TCGA-EE-A2M6 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2M7                      TCGA-EE-A2M8 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MC                      TCGA-EE-A2MD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2ME                      TCGA-EE-A2MG 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2MH                      TCGA-EE-A2MI 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MJ                      TCGA-EE-A2MK 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2ML                      TCGA-EE-A2MM 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MN                      TCGA-EE-A2MP 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2MQ                      TCGA-EE-A2MR 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MS                      TCGA-EE-A2MT 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MU                      TCGA-EE-A3AA 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AB                      TCGA-EE-A3AC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AD                      TCGA-EE-A3AE 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AF                      TCGA-EE-A3AG 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AH                      TCGA-ER-A19D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19F                      TCGA-ER-A19J 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19L                      TCGA-ER-A19M 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19N                      TCGA-ER-A1A1 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A3ET                      TCGA-ER-A3PL 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FR-A3YN                      TCGA-FS-A1YW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZD                      TCGA-FS-A1ZE 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZF                      TCGA-FS-A1ZG 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZH                      TCGA-FS-A1ZJ 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZK                      TCGA-FS-A1ZM 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZP                      TCGA-FS-A1ZR 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A1Q7                      TCGA-D3-A3C6 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3CC                      TCGA-D3-A3MO 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3MV                      TCGA-D9-A148 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A149                      TCGA-D9-A1JW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A1JX                      TCGA-D9-A3Z1 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A3Z3                      TCGA-DA-A1HV 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1HW                      TCGA-DA-A1HY 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I0                      TCGA-DA-A1I1 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-DA-A1I2                      TCGA-DA-A1I4 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I5                      TCGA-DA-A1I7 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I8                      TCGA-DA-A1IA 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-DA-A1IB                      TCGA-DA-A1IC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F2                      TCGA-DA-A3F3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F5                      TCGA-DA-A3F8 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A17X                      TCGA-EE-A17Z 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A181                      TCGA-EE-A182 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A183                      TCGA-EE-A185 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A20B                      TCGA-EE-A20F 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A20H                      TCGA-EE-A29A 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29C                      TCGA-EE-A29D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29E                      TCGA-EE-A29H 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29L                      TCGA-EE-A29M 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29N                      TCGA-EE-A29P 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29Q                      TCGA-EE-A29R 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29S                      TCGA-EE-A29T 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29V                      TCGA-EE-A29X 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2A0                      TCGA-EE-A2A1 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2A2                      TCGA-EE-A2A5 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2A6                      TCGA-EE-A2GB 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GC                      TCGA-EE-A2GD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GE                      TCGA-EE-A2GH 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GI                      TCGA-EE-A2GJ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GK                      TCGA-EE-A2GL 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GM                      TCGA-EE-A2GN 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GO                      TCGA-EE-A2GP 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2GR                      TCGA-EE-A2GS 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GT                      TCGA-EE-A2GU 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2M5                      TCGA-EE-A2M6 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2M7                      TCGA-EE-A2M8 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MC                      TCGA-EE-A2MD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2ME                      TCGA-EE-A2MG 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2MH                      TCGA-EE-A2MI 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MJ                      TCGA-EE-A2MK 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2ML                      TCGA-EE-A2MM 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MN                      TCGA-EE-A2MP 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2MQ                      TCGA-EE-A2MR 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MS                      TCGA-EE-A2MT 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MU                      TCGA-EE-A3AA 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AB                      TCGA-EE-A3AC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AD                      TCGA-EE-A3AE 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AF                      TCGA-EE-A3AG 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AH                      TCGA-ER-A19D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19F                      TCGA-ER-A19J 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19L                      TCGA-ER-A19M 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19N                      TCGA-ER-A1A1 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A3ET                      TCGA-ER-A3PL 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FR-A3YN                      TCGA-FS-A1YW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZD                      TCGA-FS-A1ZE 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZF                      TCGA-FS-A1ZG 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZH                      TCGA-FS-A1ZJ 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZK                      TCGA-FS-A1ZM 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZP                      TCGA-FS-A1ZR 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A1Q7                      TCGA-D3-A3C6 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3CC                      TCGA-D3-A3MO 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3MV                      TCGA-D9-A148 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A149                      TCGA-D9-A1JW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A1JX                      TCGA-D9-A3Z1 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A3Z3                      TCGA-DA-A1HV 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1HW                      TCGA-DA-A1HY 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I0                      TCGA-DA-A1I1 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-DA-A1I2                      TCGA-DA-A1I4 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I5                      TCGA-DA-A1I7 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I8                      TCGA-DA-A1IA 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-DA-A1IB                      TCGA-DA-A1IC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F2                      TCGA-DA-A3F3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F5                      TCGA-DA-A3F8 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A17X                      TCGA-EE-A17Z 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A181                      TCGA-EE-A182 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A183                      TCGA-EE-A185 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A20B                      TCGA-EE-A20F 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A20H                      TCGA-EE-A29A 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29C                      TCGA-EE-A29D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29E                      TCGA-EE-A29H 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29L                      TCGA-EE-A29M 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29N                      TCGA-EE-A29P 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29Q                      TCGA-EE-A29R 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29S                      TCGA-EE-A29T 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29V                      TCGA-EE-A29X 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2A0                      TCGA-EE-A2A1 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2A2                      TCGA-EE-A2A5 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2A6                      TCGA-EE-A2GB 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GC                      TCGA-EE-A2GD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GE                      TCGA-EE-A2GH 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GI                      TCGA-EE-A2GJ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GK                      TCGA-EE-A2GL 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GM                      TCGA-EE-A2GN 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GO                      TCGA-EE-A2GP 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2GR                      TCGA-EE-A2GS 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GT                      TCGA-EE-A2GU 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2M5                      TCGA-EE-A2M6 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2M7                      TCGA-EE-A2M8 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MC                      TCGA-EE-A2MD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2ME                      TCGA-EE-A2MG 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2MH                      TCGA-EE-A2MI 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MJ                      TCGA-EE-A2MK 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2ML                      TCGA-EE-A2MM 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MN                      TCGA-EE-A2MP 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2MQ                      TCGA-EE-A2MR 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MS                      TCGA-EE-A2MT 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MU                      TCGA-EE-A3AA 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AB                      TCGA-EE-A3AC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AD                      TCGA-EE-A3AE 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AF                      TCGA-EE-A3AG 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AH                      TCGA-ER-A19D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19F                      TCGA-ER-A19J 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19L                      TCGA-ER-A19M 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19N                      TCGA-ER-A1A1 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A3ET                      TCGA-ER-A3PL 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FR-A3YN                      TCGA-FS-A1YW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZD                      TCGA-FS-A1ZE 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZF                      TCGA-FS-A1ZG 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZH                      TCGA-FS-A1ZJ 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZK                      TCGA-FS-A1ZM 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZP                      TCGA-FS-A1ZR 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
[1] "hr=" "1.2"
D43V2, continuous
D43V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 19(12Q24.33) MUTATED     17   20
  DEL PEAK 19(12Q24.33) WILD-TYPE   45   76
        clus
vv       DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE
  FEMALE                            17                              45
  MALE                              20                              76
                                 vv
clus                               M0  M1 M1A M1B M1C
  DEL PEAK 19(12Q24.33) MUTATED    30   0   1   0   1
  DEL PEAK 19(12Q24.33) WILD-TYPE 104   2   1   1   1
D43V4, multiclass
                                 vv
clus                              N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 19(12Q24.33) MUTATED   20  0   2   3  1   1   0   3  2  0
  DEL PEAK 19(12Q24.33) WILD-TYPE 67  2   5  10  0   2  10   2 10  2
D43V5, multiclass
D43V6, continuous
                                 vv
clus                              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 19(12Q24.33) MUTATED         6        3        2        3         1
  DEL PEAK 19(12Q24.33) WILD-TYPE      11        6       11       15         7
                                 vv
clus                              STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 19(12Q24.33) MUTATED           2         2         3          1
  DEL PEAK 19(12Q24.33) WILD-TYPE         7         6         4          5
                                 vv
clus                              STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 19(12Q24.33) MUTATED            5          2        2
  DEL PEAK 19(12Q24.33) WILD-TYPE         12         16        3
D43V7, multiclass

Clustering(44) Variable = Del Peak 20(13q34) mutation analysis
D44V1, survival
                              sevent
clus2                           0  1
  DEL PEAK 20(13Q34) MUTATED   23 16
  DEL PEAK 20(13Q34) WILD-TYPE 58 57
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                          39                          115 
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                          16                           57 
$`DEL PEAK 20(13Q34) MUTATED`
TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I2 
      148.31        49.74         3.22        48.89        36.03       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IC TCGA-DA-A3F5 TCGA-EE-A181 
       35.93       107.34        53.92        68.09       215.44        33.73 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29T TCGA-EE-A2A6 
       13.97        39.62        18.58        37.35       345.96        58.75 
TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2M5 TCGA-EE-A2MG 
      135.91        22.55        89.33        75.48        21.67       103.17 
TCGA-EE-A2MH TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AE 
       16.96       103.56       136.44        53.26       122.73        26.73 
TCGA-EE-A3AH TCGA-FR-A3YN TCGA-FS-A1ZA TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM 
      138.77        80.48        27.68        32.71        47.38       101.26 
TCGA-FS-A4F9 TCGA-GN-A266 TCGA-GN-A26D 
       12.43        10.09        39.58 

$`DEL PEAK 20(13Q34) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW 
      121.22        58.03        71.24         9.30        21.47         2.70 
TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I7 
        6.38        11.34       117.17        20.38       194.83        61.18 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X 
       65.92        23.44        28.60        10.49        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
        8.65        14.70        26.86         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
      168.26        63.32        47.84        32.19         2.56        44.35 
TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       56.42        14.47        55.89        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       78.94        24.43        39.25        47.54        43.23       314.53 
TCGA-EE-A2GH TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
      182.01        54.71        55.00        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MI TCGA-EE-A2MJ 
       19.76        61.51        47.28       103.27       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG 
       41.59         4.24        25.84         3.68        13.81        23.47 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
       12.59        26.37         6.41       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       79.99        80.32        33.21       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD 
      202.62        20.91        28.08         7.76        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZR 
       40.27        15.45         9.70        23.93        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU 
       77.79        50.14        49.45         0.20        22.98        47.54 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        64.41        62.76 
TCGA-GN-A26A 
       32.48 

  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                        3.22                         0.20 
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                      345.96                       314.53 
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                       49.74                        47.54 
[1] "3.2 - 346.0 (49.7)" "0.2 - 314.5 (47.5)"
                  TCGA-D3-A1Q7                   TCGA-D3-A3C6 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3CC                   TCGA-D3-A3MO 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3MV                   TCGA-D9-A148 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D9-A149                   TCGA-D9-A1JW 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A1JX                   TCGA-D9-A3Z1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A3Z3                   TCGA-DA-A1HV 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1HW                   TCGA-DA-A1HY 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I0                   TCGA-DA-A1I1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I2                   TCGA-DA-A1I4 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1I5                   TCGA-DA-A1I7 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I8                   TCGA-DA-A1IA 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1IB                   TCGA-DA-A1IC 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A3F2                   TCGA-DA-A3F3 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A3F5                   TCGA-DA-A3F8 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A17X                   TCGA-EE-A17Z 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A181                   TCGA-EE-A182 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A183                   TCGA-EE-A185 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A20B                   TCGA-EE-A20F 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A20H                   TCGA-EE-A29A 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29C                   TCGA-EE-A29D 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29E                   TCGA-EE-A29H 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29L                   TCGA-EE-A29M 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29N                   TCGA-EE-A29P 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29Q                   TCGA-EE-A29R 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29S                   TCGA-EE-A29T 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29V                   TCGA-EE-A29X 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A0                   TCGA-EE-A2A1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A2                   TCGA-EE-A2A5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A6                   TCGA-EE-A2GB 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GC                   TCGA-EE-A2GD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GE                   TCGA-EE-A2GH 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GI                   TCGA-EE-A2GJ 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GK                   TCGA-EE-A2GL 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GM                   TCGA-EE-A2GN 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GO                   TCGA-EE-A2GP 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GR                   TCGA-EE-A2GS 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GT                   TCGA-EE-A2GU 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2M5                   TCGA-EE-A2M6 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2M7                   TCGA-EE-A2M8 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MC                   TCGA-EE-A2MD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2ME                   TCGA-EE-A2MG 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MH                   TCGA-EE-A2MI 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MJ                   TCGA-EE-A2MK 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2ML                   TCGA-EE-A2MM 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MN                   TCGA-EE-A2MP 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MQ                   TCGA-EE-A2MR 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MS                   TCGA-EE-A2MT 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MU                   TCGA-EE-A3AA 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AB                   TCGA-EE-A3AC 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AD                   TCGA-EE-A3AE 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A3AF                   TCGA-EE-A3AG 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AH                   TCGA-ER-A19D 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19F                   TCGA-ER-A19J 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19L                   TCGA-ER-A19M 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19N                   TCGA-ER-A1A1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A3ET                   TCGA-ER-A3PL 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FR-A3YN                   TCGA-FS-A1YW 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZD                   TCGA-FS-A1ZE 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZF                   TCGA-FS-A1ZG 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZH                   TCGA-FS-A1ZJ 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FS-A1ZK                   TCGA-FS-A1ZM 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FS-A1ZP                   TCGA-FS-A1ZR 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-GN-A267                   TCGA-GN-A268 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D3-A1Q7                   TCGA-D3-A3C6 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3CC                   TCGA-D3-A3MO 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3MV                   TCGA-D9-A148 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D9-A149                   TCGA-D9-A1JW 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A1JX                   TCGA-D9-A3Z1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A3Z3                   TCGA-DA-A1HV 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1HW                   TCGA-DA-A1HY 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I0                   TCGA-DA-A1I1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I2                   TCGA-DA-A1I4 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1I5                   TCGA-DA-A1I7 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I8                   TCGA-DA-A1IA 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1IB                   TCGA-DA-A1IC 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A3F2                   TCGA-DA-A3F3 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A3F5                   TCGA-DA-A3F8 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A17X                   TCGA-EE-A17Z 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A181                   TCGA-EE-A182 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A183                   TCGA-EE-A185 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A20B                   TCGA-EE-A20F 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A20H                   TCGA-EE-A29A 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29C                   TCGA-EE-A29D 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29E                   TCGA-EE-A29H 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29L                   TCGA-EE-A29M 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29N                   TCGA-EE-A29P 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29Q                   TCGA-EE-A29R 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29S                   TCGA-EE-A29T 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29V                   TCGA-EE-A29X 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A0                   TCGA-EE-A2A1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A2                   TCGA-EE-A2A5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A6                   TCGA-EE-A2GB 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GC                   TCGA-EE-A2GD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GE                   TCGA-EE-A2GH 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GI                   TCGA-EE-A2GJ 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GK                   TCGA-EE-A2GL 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GM                   TCGA-EE-A2GN 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GO                   TCGA-EE-A2GP 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GR                   TCGA-EE-A2GS 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GT                   TCGA-EE-A2GU 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2M5                   TCGA-EE-A2M6 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2M7                   TCGA-EE-A2M8 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MC                   TCGA-EE-A2MD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2ME                   TCGA-EE-A2MG 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MH                   TCGA-EE-A2MI 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MJ                   TCGA-EE-A2MK 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2ML                   TCGA-EE-A2MM 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MN                   TCGA-EE-A2MP 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MQ                   TCGA-EE-A2MR 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MS                   TCGA-EE-A2MT 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MU                   TCGA-EE-A3AA 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AB                   TCGA-EE-A3AC 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AD                   TCGA-EE-A3AE 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A3AF                   TCGA-EE-A3AG 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AH                   TCGA-ER-A19D 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19F                   TCGA-ER-A19J 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19L                   TCGA-ER-A19M 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19N                   TCGA-ER-A1A1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A3ET                   TCGA-ER-A3PL 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FR-A3YN                   TCGA-FS-A1YW 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZD                   TCGA-FS-A1ZE 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZF                   TCGA-FS-A1ZG 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZH                   TCGA-FS-A1ZJ 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FS-A1ZK                   TCGA-FS-A1ZM 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FS-A1ZP                   TCGA-FS-A1ZR 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-GN-A267                   TCGA-GN-A268 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D3-A1Q7                   TCGA-D3-A3C6 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3CC                   TCGA-D3-A3MO 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3MV                   TCGA-D9-A148 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D9-A149                   TCGA-D9-A1JW 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A1JX                   TCGA-D9-A3Z1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A3Z3                   TCGA-DA-A1HV 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1HW                   TCGA-DA-A1HY 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I0                   TCGA-DA-A1I1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I2                   TCGA-DA-A1I4 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1I5                   TCGA-DA-A1I7 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I8                   TCGA-DA-A1IA 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1IB                   TCGA-DA-A1IC 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A3F2                   TCGA-DA-A3F3 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A3F5                   TCGA-DA-A3F8 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A17X                   TCGA-EE-A17Z 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A181                   TCGA-EE-A182 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A183                   TCGA-EE-A185 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A20B                   TCGA-EE-A20F 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A20H                   TCGA-EE-A29A 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29C                   TCGA-EE-A29D 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29E                   TCGA-EE-A29H 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29L                   TCGA-EE-A29M 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29N                   TCGA-EE-A29P 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29Q                   TCGA-EE-A29R 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29S                   TCGA-EE-A29T 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29V                   TCGA-EE-A29X 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A0                   TCGA-EE-A2A1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A2                   TCGA-EE-A2A5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A6                   TCGA-EE-A2GB 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GC                   TCGA-EE-A2GD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GE                   TCGA-EE-A2GH 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GI                   TCGA-EE-A2GJ 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GK                   TCGA-EE-A2GL 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GM                   TCGA-EE-A2GN 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GO                   TCGA-EE-A2GP 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GR                   TCGA-EE-A2GS 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GT                   TCGA-EE-A2GU 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2M5                   TCGA-EE-A2M6 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2M7                   TCGA-EE-A2M8 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MC                   TCGA-EE-A2MD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2ME                   TCGA-EE-A2MG 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MH                   TCGA-EE-A2MI 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MJ                   TCGA-EE-A2MK 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2ML                   TCGA-EE-A2MM 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MN                   TCGA-EE-A2MP 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MQ                   TCGA-EE-A2MR 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MS                   TCGA-EE-A2MT 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MU                   TCGA-EE-A3AA 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AB                   TCGA-EE-A3AC 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AD                   TCGA-EE-A3AE 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A3AF                   TCGA-EE-A3AG 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AH                   TCGA-ER-A19D 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19F                   TCGA-ER-A19J 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19L                   TCGA-ER-A19M 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19N                   TCGA-ER-A1A1 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A3ET                   TCGA-ER-A3PL 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FR-A3YN                   TCGA-FS-A1YW 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZD                   TCGA-FS-A1ZE 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZF                   TCGA-FS-A1ZG 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZH                   TCGA-FS-A1ZJ 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FS-A1ZK                   TCGA-FS-A1ZM 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FS-A1ZP                   TCGA-FS-A1ZR 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-GN-A267                   TCGA-GN-A268 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
[1] "hr=" "1.4"
D44V2, continuous
D44V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 20(13Q34) MUTATED     14   25
  DEL PEAK 20(13Q34) WILD-TYPE   48   71
        clus
vv       DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE
  FEMALE                         14                           48
  MALE                           25                           71
                              vv
clus                            M0  M1 M1A M1B M1C
  DEL PEAK 20(13Q34) MUTATED    33   0   0   1   2
  DEL PEAK 20(13Q34) WILD-TYPE 101   2   2   0   0
D44V4, multiclass
                              vv
clus                           N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 20(13Q34) MUTATED   20  0   0   5  0   0   3   4  4  1
  DEL PEAK 20(13Q34) WILD-TYPE 67  2   7   8  1   3   7   1  8  1
D44V5, multiclass
D44V6, continuous
                              vv
clus                           STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 20(13Q34) MUTATED         5        5        1        4         0
  DEL PEAK 20(13Q34) WILD-TYPE      12        4       12       14         8
                              vv
clus                           STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 20(13Q34) MUTATED           1         2         1          0
  DEL PEAK 20(13Q34) WILD-TYPE         8         6         6          6
                              vv
clus                           STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 20(13Q34) MUTATED            7          5        2
  DEL PEAK 20(13Q34) WILD-TYPE         10         13        3
D44V7, multiclass

Clustering(45) Variable = Del Peak 21(14q32.2) mutation analysis
D45V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 21(14Q32.2) MUTATED   25 24
  DEL PEAK 21(14Q32.2) WILD-TYPE 56 49
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                            49                            105 
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                            24                             49 
$`DEL PEAK 21(14Q32.2) MUTATED`
TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A149 TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I1 
       71.24        21.47        49.74        48.89       117.17       194.83 
TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A29C TCGA-EE-A29V 
      107.34        53.92       215.44        33.73        47.84        25.87 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GJ 
       24.43        39.25        58.75        47.54       135.91        89.33 
TCGA-EE-A2GP TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       13.87        67.13       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MK TCGA-EE-A2MN TCGA-EE-A2MS 
       47.28       103.17        16.96       144.76        47.54       136.44 
TCGA-EE-A3AA TCGA-EE-A3AH TCGA-ER-A3PL TCGA-FS-A1YX TCGA-FS-A1Z4 TCGA-FS-A1Z7 
        4.24       138.77        33.21        48.59        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZE TCGA-FS-A1ZH TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZT 
       27.68        40.27        32.71       101.26        11.41        53.16 
TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A267 TCGA-GN-A268 
       50.14        12.43        47.54       117.93        64.41        62.76 
TCGA-GN-A26A 
       32.48 

$`DEL PEAK 21(14Q32.2) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A1JW TCGA-D9-A1JX 
      121.22        58.03         9.30       148.31         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 
       11.34         3.22        36.03        20.38       176.55        35.93 
TCGA-DA-A1I7 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       61.18        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29E 
      109.64        78.87       168.26        63.32        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       14.47        55.89       345.96        17.92        46.82        78.94 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL 
       43.23       314.53       182.01        22.55        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       75.48        90.94       101.95        14.30        55.59        19.56 
TCGA-EE-A2M5 TCGA-EE-A2ME TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MM 
       21.67       103.27       204.62        96.23       203.01       167.87 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
      248.61        43.23       103.56        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D 
       25.84         3.68        26.73        13.81        23.47        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 
       26.37         6.41       131.08        61.05        44.05        79.99 
TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32        80.48       216.92       228.59       202.62        20.91 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       48.85        53.52        15.45         9.70        47.38        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
       74.73       148.77        26.56        49.48        27.06        27.02 
TCGA-FS-A4F0 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 
       77.79        49.45         0.20        22.98        76.41       120.46 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A26D 
       84.72        10.09        39.58 

  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                          4.24                           0.20 
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                        215.44                         345.96 
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                         48.59                          44.35 
[1] "4.2 - 215.4 (48.6)" "0.2 - 346.0 (44.4)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
[1] "hr=" "1.1"
D45V2, continuous
D45V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 21(14Q32.2) MUTATED     17   34
  DEL PEAK 21(14Q32.2) WILD-TYPE   45   62
        clus
vv       DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE
  FEMALE                           17                             45
  MALE                             34                             62
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 21(14Q32.2) MUTATED   43  0   1   0   2
  DEL PEAK 21(14Q32.2) WILD-TYPE 91  2   1   1   0
D45V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 21(14Q32.2) MUTATED   26  1   4   5  0   1   1   3  5  0
  DEL PEAK 21(14Q32.2) WILD-TYPE 61  1   3   8  1   2   9   2  7  2
D45V5, multiclass
D45V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 21(14Q32.2) MUTATED         7        3        2        8         0
  DEL PEAK 21(14Q32.2) WILD-TYPE      10        6       11       10         8
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 21(14Q32.2) MUTATED           1         3         3          3
  DEL PEAK 21(14Q32.2) WILD-TYPE         8         5         4          3
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 21(14Q32.2) MUTATED            5          7        3
  DEL PEAK 21(14Q32.2) WILD-TYPE         12         11        2
D45V7, multiclass

Clustering(46) Variable = Del Peak 22(15q13.3) mutation analysis
D46V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 22(15Q13.3) MUTATED   17 21
  DEL PEAK 22(15Q13.3) WILD-TYPE 64 52
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                            38                            116 
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                            21                             52 
$`DEL PEAK 22(15Q13.3) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D9-A148 TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW 
       58.03        71.24       148.31         6.38        48.89        36.03 
TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I8 TCGA-EE-A17Z TCGA-EE-A29L TCGA-EE-A29P 
      117.17       194.83        53.92         8.65         2.56        56.42 
TCGA-EE-A29Q TCGA-EE-A2A5 TCGA-EE-A2GP TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2MD 
       37.35        39.25        13.87        21.67        61.51        47.28 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MT TCGA-EE-A2MU 
       16.96       204.62       144.76       167.87        41.59        53.26 
TCGA-EE-A3AB TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZE TCGA-FS-A1ZG 
      122.73        48.59       202.62        28.08        40.27         9.70 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A266 
       23.93       101.26         0.20        47.54       117.93        10.09 
TCGA-GN-A267 TCGA-GN-A26D 
       64.41        39.58 

$`DEL PEAK 22(15Q13.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z1 
      121.22         9.30        21.47        49.74         2.70        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
        3.22        20.38       176.55        35.93       107.34        61.18 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29S 
       39.62        32.19        44.35        18.58        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
      101.95        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2ML 
       28.80        19.76       103.27       103.17        96.23       203.01 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A3AA 
       47.54       248.61        43.23       103.56       136.44         4.24 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
       12.59        26.37         6.41       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY 
       79.99        80.32        33.21        80.48       216.92       228.59 
TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZF 
       20.91         7.76        27.68        48.85        53.52        15.45 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       32.71        47.38        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 
       26.56        49.48        27.06        27.02        77.79        50.14 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 
       12.43        49.45        22.98        76.41       120.46        84.72 
TCGA-GN-A268 TCGA-GN-A26A 
       62.76        32.48 

  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                           0.2                            2.7 
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                        204.62                         345.96 
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                        48.065                         47.540 
[1] "0.2 - 204.6 (48.1)" "2.7 - 346.0 (47.5)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
[1] "hr=" "1.3"
D46V2, continuous
D46V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 22(15Q13.3) MUTATED     17   22
  DEL PEAK 22(15Q13.3) WILD-TYPE   45   74
        clus
vv       DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE
  FEMALE                           17                             45
  MALE                             22                             74
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK 22(15Q13.3) MUTATED    32   1   0   1   0
  DEL PEAK 22(15Q13.3) WILD-TYPE 102   1   2   0   2
D46V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 22(15Q13.3) MUTATED   22  0   2   1  0   0   3   1  5  1
  DEL PEAK 22(15Q13.3) WILD-TYPE 65  2   5  12  1   3   7   4  7  1
D46V5, multiclass
D46V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 22(15Q13.3) MUTATED         5        2        3        4         0
  DEL PEAK 22(15Q13.3) WILD-TYPE      12        7       10       14         8
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 22(15Q13.3) MUTATED           3         4         2          1
  DEL PEAK 22(15Q13.3) WILD-TYPE         6         4         5          5
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 22(15Q13.3) MUTATED            3          5        1
  DEL PEAK 22(15Q13.3) WILD-TYPE         14         13        4
D46V7, multiclass

Clustering(47) Variable = Del Peak 23(15q15.3) mutation analysis
D47V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 23(15Q15.3) MUTATED   14 23
  DEL PEAK 23(15Q15.3) WILD-TYPE 67 50
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                            37                            117 
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                            23                             50 
$`DEL PEAK 23(15Q15.3) MUTATED`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D9-A148 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I1 
       58.03        71.24       148.31        48.89        36.03       194.83 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A29L 
       53.92        65.92         8.65        33.73        26.86         2.56 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A2A5 TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2MD 
       56.42        37.35        39.25        21.67        61.51        47.28 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MU TCGA-EE-A3AB 
       16.96       204.62       144.76       167.87        53.26       122.73 
TCGA-ER-A19J TCGA-ER-A3ET TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZG 
        6.41        80.32        48.59       202.62        28.08         9.70 
TCGA-FS-A1ZM TCGA-FS-A1ZT TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 
      101.26        53.16        47.54       117.93        10.09        64.41 
TCGA-GN-A26D 
       39.58 

$`DEL PEAK 23(15Q15.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
      121.22         9.30        21.47        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 
       11.34         3.22       117.17        20.38       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
      107.34        61.18        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20B 
      215.44        15.68        29.82        14.70         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       78.87       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       32.19        44.35        18.58        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 
       25.87        17.92        46.82        78.94        24.43        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
       13.87        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2ML 
       28.80        19.76       103.27       103.17        96.23       203.01 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
      138.77        12.59        26.37       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z3 
       79.99        33.21        80.48       216.92       228.59        20.91 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        47.38        23.93        74.73        11.41       148.77 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 
       26.56        49.48        27.06        27.02        77.79        50.14 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 
       12.43        49.45         0.20        22.98        76.41       120.46 
TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26A 
       84.72        62.76        32.48 

  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                          2.56                           0.20 
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                        204.62                         345.96 
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                         53.16                          46.82 
[1] "2.6 - 204.6 (53.2)" "0.2 - 346.0 (46.8)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
[1] "hr=" "1.4"
D47V2, continuous
D47V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 23(15Q15.3) MUTATED     18   20
  DEL PEAK 23(15Q15.3) WILD-TYPE   44   76
        clus
vv       DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE
  FEMALE                           18                             44
  MALE                             20                             76
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK 23(15Q15.3) MUTATED    31   1   0   1   0
  DEL PEAK 23(15Q15.3) WILD-TYPE 103   1   2   0   2
D47V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 23(15Q15.3) MUTATED   20  0   2   3  0   0   3   1  5  0
  DEL PEAK 23(15Q15.3) WILD-TYPE 67  2   5  10  1   3   7   4  7  2
D47V5, multiclass
D47V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 23(15Q15.3) MUTATED         6        2        2        4         0
  DEL PEAK 23(15Q15.3) WILD-TYPE      11        7       11       14         8
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 23(15Q15.3) MUTATED           3         3         3          2
  DEL PEAK 23(15Q15.3) WILD-TYPE         6         5         4          4
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 23(15Q15.3) MUTATED            3          4        1
  DEL PEAK 23(15Q15.3) WILD-TYPE         14         14        4
D47V7, multiclass

Clustering(48) Variable = Del Peak 24(16p13.3) mutation analysis
D48V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 24(16P13.3) MUTATED   15 14
  DEL PEAK 24(16P13.3) WILD-TYPE 66 59
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                            29                            125 
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                            14                             59 
$`DEL PEAK 24(16P13.3) MUTATED`
TCGA-D3-A3CC TCGA-DA-A1HW TCGA-DA-A1I2 TCGA-EE-A181 TCGA-EE-A29D TCGA-EE-A29L 
       71.24        36.03       176.55        33.73        13.97         2.56 
TCGA-EE-A29M TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2GC TCGA-EE-A2GO TCGA-EE-A2GU 
       44.35        17.92        46.82        43.23       101.95        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MU 
       21.67       129.24       144.76       167.87        43.23        53.26 
TCGA-EE-A3AB TCGA-FS-A1Z0 TCGA-FS-A1ZD TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
      122.73       202.62        53.52        53.16        26.56        49.48 
TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A267 TCGA-GN-A26D 
       22.98        47.54       120.46        64.41        39.58 

$`DEL PEAK 24(16P13.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HY 
        2.70         6.38        11.34         3.22        48.89       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       194.83        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E 
      109.64        78.87       168.26        63.32        47.84        39.62 
TCGA-EE-A29H TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       32.19        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
      345.96        25.87        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       47.54       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR 
       54.71        55.00        75.48        90.94        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       55.59        19.56        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML 
      103.27       103.17        16.96       204.62        96.23       203.01 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AA 
       47.54       248.61       103.56       136.44        41.59         4.24 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
       12.59        26.37         6.41       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX 
       79.99        80.32        33.21        80.48       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      228.59        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      101.26        74.73        11.41       148.77        27.06        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-GN-A261 
       77.79        50.14        12.43        49.45         0.20        76.41 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        62.76        32.48 

  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                          2.56                           0.20 
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                        202.62                         345.96 
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                         49.48                          47.54 
[1] "2.6 - 202.6 (49.5)" "0.2 - 346.0 (47.5)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
[1] "hr=" "1"  
D48V2, continuous
D48V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 24(16P13.3) MUTATED     16   13
  DEL PEAK 24(16P13.3) WILD-TYPE   46   83
        clus
vv       DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE
  FEMALE                           16                             46
  MALE                             13                             83
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK 24(16P13.3) MUTATED    25   0   0   0   0
  DEL PEAK 24(16P13.3) WILD-TYPE 109   2   2   1   2
D48V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 24(16P13.3) MUTATED   17  0   2   3  1   1   1   0  1  0
  DEL PEAK 24(16P13.3) WILD-TYPE 70  2   5  10  0   2   9   5 11  2
D48V5, multiclass
D48V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 24(16P13.3) MUTATED         3        3        2        3         2
  DEL PEAK 24(16P13.3) WILD-TYPE      14        6       11       15         6
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 24(16P13.3) MUTATED           1         3         2          2
  DEL PEAK 24(16P13.3) WILD-TYPE         8         5         5          4
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 24(16P13.3) MUTATED            2          3        0
  DEL PEAK 24(16P13.3) WILD-TYPE         15         15        5
D48V7, multiclass

Clustering(49) Variable = Del Peak 25(16q12.1) mutation analysis
D49V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 25(16Q12.1) MUTATED   25 29
  DEL PEAK 25(16Q12.1) WILD-TYPE 56 44
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                            54                            100 
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                            29                             44 
$`DEL PEAK 25(16Q12.1) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A3Z3 TCGA-DA-A1HW 
      121.22        71.24       148.31        49.74         3.22        36.03 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 
      176.55        35.93       215.44        15.68         8.65        33.73 
TCGA-EE-A185 TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
        4.93        47.84        13.97         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GO 
       56.42        17.92        46.82        39.25        43.23       101.95 
TCGA-EE-A2GP TCGA-EE-A2M5 TCGA-EE-A2MD TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM 
       13.87        21.67        47.28        96.23       144.76       167.87 
TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AE 
       47.54        43.23       136.44        53.26       122.73        26.73 
TCGA-EE-A3AF TCGA-ER-A19N TCGA-FS-A1Z0 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZF 
       13.81        44.05       202.62        27.68        48.85        15.45 
TCGA-FS-A1ZP TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A4F2 TCGA-FW-A3I3 
       74.73        53.16        26.56        49.48        50.14         0.20 
TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A267 TCGA-GN-A26D 
       22.98        47.54       120.46       117.93        64.41        39.58 

$`DEL PEAK 25(16Q12.1) WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
       58.03         9.30        21.47         2.70         6.38        11.34 
TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I5 TCGA-DA-A1I7 
       48.89       117.17        20.38       194.83       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H 
       29.82        14.70        26.86       109.64        78.87       168.26 
TCGA-EE-A29A TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       63.32        39.62        32.19        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB 
      345.96        25.87        78.94        24.43        58.75        47.54 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        75.48        90.94        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME 
       67.13       129.24        28.80        19.76        61.51       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2ML TCGA-EE-A2MP TCGA-EE-A2MR 
      103.17        16.96       204.62       203.01       248.61       103.56 
TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AG TCGA-EE-A3AH 
       41.59         4.24        25.84         3.68        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        61.05        79.99 
TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       80.32        33.21        80.48       216.92        48.59       228.59 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG 
       20.91        28.08         7.76        53.52        40.27         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        47.38        23.93       101.26        11.41       148.77 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-GN-A261 
       27.06        27.02        77.79        12.43        49.45        76.41 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26A 
       84.72        10.09        62.76        32.48 

  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                           0.2                            2.7 
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                        215.44                         345.96 
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                         47.05                          49.17 
[1] "0.2 - 215.4 (47.0)" "2.7 - 346.0 (49.2)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
[1] "hr=" "1.4"
D49V2, continuous
D49V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 25(16Q12.1) MUTATED     25   29
  DEL PEAK 25(16Q12.1) WILD-TYPE   37   67
        clus
vv       DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE
  FEMALE                           25                             37
  MALE                             29                             67
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 25(16Q12.1) MUTATED   45  1   0   1   0
  DEL PEAK 25(16Q12.1) WILD-TYPE 89  1   2   0   2
D49V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 25(16Q12.1) MUTATED   30  0   3   5  1   1   3   1  4  0
  DEL PEAK 25(16Q12.1) WILD-TYPE 57  2   4   8  0   2   7   4  8  2
D49V5, multiclass
D49V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 25(16Q12.1) MUTATED         3        3        5        8         1
  DEL PEAK 25(16Q12.1) WILD-TYPE      14        6        8       10         7
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 25(16Q12.1) MUTATED           2         6         2          2
  DEL PEAK 25(16Q12.1) WILD-TYPE         7         2         5          4
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 25(16Q12.1) MUTATED            7          5        1
  DEL PEAK 25(16Q12.1) WILD-TYPE         10         13        4
D49V7, multiclass

Clustering(50) Variable = Del Peak 26(16q24.3) mutation analysis
D50V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 26(16Q24.3) MUTATED   24 31
  DEL PEAK 26(16Q24.3) WILD-TYPE 57 42
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                            55                             99 
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                            31                             42 
$`DEL PEAK 26(16Q24.3) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z3 
      121.22        71.24       148.31        49.74         2.70         3.22 
TCGA-DA-A1HW TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 
       36.03       176.55        35.93        15.68         8.65        33.73 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29P 
       26.86         4.93        13.97        32.19        44.35        56.42 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GO TCGA-EE-A2GP 
       17.92        46.82        39.25        43.23       101.95        13.87 
TCGA-EE-A2M5 TCGA-EE-A2MD TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
       21.67        47.28       103.17       204.62        96.23       144.76 
TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AE TCGA-EE-A3AF 
      167.87        43.23        53.26       122.73        26.73        13.81 
TCGA-ER-A19F TCGA-ER-A19N TCGA-ER-A3PL TCGA-FS-A1Z0 TCGA-FS-A1ZB TCGA-FS-A1ZF 
       26.37        44.05        33.21       202.62        48.85        15.45 
TCGA-FS-A1ZJ TCGA-FS-A1ZP TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       47.38        74.73        53.16        26.56        49.48        27.06 
TCGA-FS-A4F2 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A267 TCGA-GN-A268 
       50.14        22.98        47.54       120.46        64.41        62.76 
TCGA-GN-A26D 
       39.58 

$`DEL PEAK 26(16Q24.3) WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV 
       58.03         9.30        21.47         6.38        11.34        48.89 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      117.17        20.38       194.83       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       29.82        14.70       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29R 
       47.84        39.62         2.56        18.58        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 
       55.89       345.96        25.87        78.94        24.43        58.75 
TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       47.54       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GR TCGA-EE-A2GS 
       54.71        55.00        75.48        90.94        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       19.56        67.13       129.24        28.80        19.76        61.51 
TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR 
      103.27        16.96       203.01        47.54       248.61       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AG 
      136.44        41.59         4.24        25.84         3.68        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A1A1 
      138.77        12.59         6.41       131.08        61.05        79.99 
TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 
       80.32        80.48       216.92        48.59       228.59        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG 
       28.08         7.76        27.68        53.52        40.27         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZZ 
       32.71        23.93       101.26        11.41       148.77        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A264 
       77.79        12.43        49.45         0.20        76.41       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A26A 
       84.72        10.09        32.48 

  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                           2.7                            0.2 
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                        204.62                         345.96 
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                         44.35                          49.45 
[1] "2.7 - 204.6 (44.4)" "0.2 - 346.0 (49.5)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A181                     TCGA-EE-A182 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
[1] "hr=" "1.6"
D50V2, continuous
D50V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 26(16Q24.3) MUTATED     26   30
  DEL PEAK 26(16Q24.3) WILD-TYPE   36   66
        clus
vv       DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE
  FEMALE                           26                             36
  MALE                             30                             66
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 26(16Q24.3) MUTATED   48  0   1   1   0
  DEL PEAK 26(16Q24.3) WILD-TYPE 86  2   1   0   2
D50V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 26(16Q24.3) MUTATED   34  0   3   6  1   2   3   0  2  0
  DEL PEAK 26(16Q24.3) WILD-TYPE 53  2   4   7  0   1   7   5 10  2
D50V5, multiclass
D50V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 26(16Q24.3) MUTATED         5        4        4        7         1
  DEL PEAK 26(16Q24.3) WILD-TYPE      12        5        9       11         7
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 26(16Q24.3) MUTATED           5         6         2          2
  DEL PEAK 26(16Q24.3) WILD-TYPE         4         2         5          4
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 26(16Q24.3) MUTATED            7          3        1
  DEL PEAK 26(16Q24.3) WILD-TYPE         10         15        4
D50V7, multiclass

Clustering(51) Variable = Del Peak 27(19p13.3) mutation analysis
D51V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 27(19P13.3) MUTATED   25 20
  DEL PEAK 27(19P13.3) WILD-TYPE 56 53
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                            45                            109 
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                            20                             53 
$`DEL PEAK 27(19P13.3) MUTATED`
TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I0 
      148.31         6.38         3.22        48.89        36.03        20.38 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F5 
      107.34        61.18        53.92        65.92        68.09       215.44 
TCGA-EE-A17X TCGA-EE-A185 TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H 
       29.82         4.93       168.26        47.84        13.97        32.19 
TCGA-EE-A29N TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A6 TCGA-EE-A2GB 
       18.58        25.87        17.92        46.82        58.75        47.54 
TCGA-EE-A2GM TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2MG TCGA-EE-A2MP TCGA-EE-A2MQ 
       75.48        55.59        67.13       103.17       248.61        43.23 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-ER-A19M 
      136.44        41.59       122.73        25.84         3.68        61.05 
TCGA-FR-A3YN TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZT TCGA-FS-A1ZW 
       80.48        53.52        15.45        32.71        53.16        49.48 
TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A268 
       47.54       120.46        62.76 

$`DEL PEAK 27(19P13.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 
      121.22        58.03        71.24         9.30        21.47        49.74 
TCGA-D9-A1JW TCGA-D9-A3Z1 TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
        2.70        11.34       117.17       194.83       176.55        35.93 
TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 
       23.44        28.60        10.49        15.68         8.65        33.73 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29E 
       14.70        26.86       109.64        78.87        63.32        39.62 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
        2.56        44.35        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GD 
      345.96        78.94        24.43        39.25        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2M5 
       90.94       101.95        13.87        14.30        19.56        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MR TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AE TCGA-EE-A3AF 
       47.54       103.56        53.26         4.24        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX 
       44.05        79.99        80.32        33.21       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       48.85        40.27         9.70        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ 
       74.73        11.41       148.77        26.56        27.06        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 
       77.79        50.14        12.43        49.45         0.20        22.98 
TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
       76.41       117.93        84.72        10.09        64.41        32.48 
TCGA-GN-A26D 
       39.58 

  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                          3.22                           0.20 
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                        248.61                         345.96 
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                         49.48                          44.35 
[1] "3.2 - 248.6 (49.5)" "0.2 - 346.0 (44.4)"
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q7                     TCGA-D3-A3C6 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3CC                     TCGA-D3-A3MO 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3MV                     TCGA-D9-A148 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D9-A149                     TCGA-D9-A1JW 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A1JX                     TCGA-D9-A3Z1 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A3Z3                     TCGA-DA-A1HV 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1HW                     TCGA-DA-A1HY 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I0                     TCGA-DA-A1I1 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I2                     TCGA-DA-A1I4 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I5                     TCGA-DA-A1I7 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1I8                     TCGA-DA-A1IA 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1IB                     TCGA-DA-A1IC 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A3F2                     TCGA-DA-A3F3 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A3F5                     TCGA-DA-A3F8 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A17X                     TCGA-EE-A17Z 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A181                     TCGA-EE-A182 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A183                     TCGA-EE-A185 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A20B                     TCGA-EE-A20F 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A20H                     TCGA-EE-A29A 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29C                     TCGA-EE-A29D 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29E                     TCGA-EE-A29H 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29L                     TCGA-EE-A29M 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29N                     TCGA-EE-A29P 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29Q                     TCGA-EE-A29R 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29S                     TCGA-EE-A29T 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29V                     TCGA-EE-A29X 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2A0                     TCGA-EE-A2A1 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2A2                     TCGA-EE-A2A5 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2A6                     TCGA-EE-A2GB 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GC                     TCGA-EE-A2GD 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GE                     TCGA-EE-A2GH 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GI                     TCGA-EE-A2GJ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GK                     TCGA-EE-A2GL 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GM                     TCGA-EE-A2GN 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GO                     TCGA-EE-A2GP 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GR                     TCGA-EE-A2GS 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GT                     TCGA-EE-A2GU 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2M5                     TCGA-EE-A2M6 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2M7                     TCGA-EE-A2M8 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MC                     TCGA-EE-A2MD 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2ME                     TCGA-EE-A2MG 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MH                     TCGA-EE-A2MI 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MJ                     TCGA-EE-A2MK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2ML                     TCGA-EE-A2MM 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MN                     TCGA-EE-A2MP 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MQ                     TCGA-EE-A2MR 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MS                     TCGA-EE-A2MT 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MU                     TCGA-EE-A3AA 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AB                     TCGA-EE-A3AC 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A3AD                     TCGA-EE-A3AE 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AF                     TCGA-EE-A3AG 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AH                     TCGA-ER-A19D 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19F                     TCGA-ER-A19J 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19L                     TCGA-ER-A19M 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-ER-A19N                     TCGA-ER-A1A1 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A3ET                     TCGA-ER-A3PL 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FR-A3YN                     TCGA-FS-A1YW 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZD                     TCGA-FS-A1ZE 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZF                     TCGA-FS-A1ZG 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZH                     TCGA-FS-A1ZJ 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZK                     TCGA-FS-A1ZM 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZP                     TCGA-FS-A1ZR 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
[1] "hr=" "1.1"
D51V2, continuous
D51V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 27(19P13.3) MUTATED     21   26
  DEL PEAK 27(19P13.3) WILD-TYPE   41   70
        clus
vv       DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE
  FEMALE                           21                             41
  MALE                             26                             70
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 27(19P13.3) MUTATED   37  0   1   1   2
  DEL PEAK 27(19P13.3) WILD-TYPE 97  2   1   0   0
D51V4, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 27(19P13.3) MUTATED   21  0   2   6  0   1   3   2  5  1
  DEL PEAK 27(19P13.3) WILD-TYPE 66  2   5   7  1   2   7   3  7  1
D51V5, multiclass
D51V6, continuous
                                vv
clus                             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA
  DEL PEAK 27(19P13.3) MUTATED         3        4        6        1         2
  DEL PEAK 27(19P13.3) WILD-TYPE      14        5        7       17         6
                                vv
clus                             STAGE IIB STAGE IIC STAGE III STAGE IIIA
  DEL PEAK 27(19P13.3) MUTATED           1         2         2          2
  DEL PEAK 27(19P13.3) WILD-TYPE         8         6         5          4
                                vv
clus                             STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 27(19P13.3) MUTATED            7          6        2
  DEL PEAK 27(19P13.3) WILD-TYPE         10         12        3
D51V7, multiclass
                   V1.D                      V2                      V3 
        "Time to Death"                   "AGE"                "GENDER" 
                     V4                      V5                      V6 
   "DISTANT.METASTASIS" "LYMPH.NODE.METASTASIS"       "TUMOR.STAGECODE" 
                     V7 
"NEOPLASM.DISEASESTAGE" 
> q(save="no")
