
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.81.4078/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.81.4078/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/376905/SKCM-TM.mutsig.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/SKCM-TM/2844285/1.GDAC_clinicalDataPicker.Finished/SKCM-TM.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"  "-oT="
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=165, in cluster file=225, common to both=146
[1] "Reduce the number of clustering variables from 129 to 125."
[1] 125 146
[1] "TP53 MUTATION ANALYSIS"
[1] 3
  TP53 MUTATED TP53 WILD-TYPE 
            25            121 
  TP53 MUTATED TP53 WILD-TYPE 
            25            121 
[1] "BRAF MUTATION ANALYSIS"
[1] 3
  BRAF MUTATED BRAF WILD-TYPE 
            73             73 
  BRAF MUTATED BRAF WILD-TYPE 
            73             73 
[1] "C15ORF23 MUTATION ANALYSIS"
[1] 3
  C15ORF23 MUTATED C15ORF23 WILD-TYPE 
                10                136 
  C15ORF23 MUTATED C15ORF23 WILD-TYPE 
                10                136 
[1] "CDKN2A MUTATION ANALYSIS"
[1] 3
  CDKN2A MUTATED CDKN2A WILD-TYPE 
              22              124 
  CDKN2A MUTATED CDKN2A WILD-TYPE 
              22              124 
[1] "NRAS MUTATION ANALYSIS"
[1] 3
  NRAS MUTATED NRAS WILD-TYPE 
            45            101 
  NRAS MUTATED NRAS WILD-TYPE 
            45            101 
[1] "OXA1L MUTATION ANALYSIS"
[1] 3
  OXA1L MUTATED OXA1L WILD-TYPE 
              4             142 
  OXA1L MUTATED OXA1L WILD-TYPE 
              4             142 
[1] "STK19 MUTATION ANALYSIS"
[1] 3
  STK19 MUTATED STK19 WILD-TYPE 
              9             137 
  STK19 MUTATED STK19 WILD-TYPE 
              9             137 
[1] "PTEN MUTATION ANALYSIS"
[1] 3
  PTEN MUTATED PTEN WILD-TYPE 
            11            135 
  PTEN MUTATED PTEN WILD-TYPE 
            11            135 
[1] "RAC1 MUTATION ANALYSIS"
[1] 3
  RAC1 MUTATED RAC1 WILD-TYPE 
            11            135 
  RAC1 MUTATED RAC1 WILD-TYPE 
            11            135 
[1] "ACSM2B MUTATION ANALYSIS"
[1] 3
  ACSM2B MUTATED ACSM2B WILD-TYPE 
              28              118 
  ACSM2B MUTATED ACSM2B WILD-TYPE 
              28              118 
[1] "CADM2 MUTATION ANALYSIS"
[1] 3
  CADM2 MUTATED CADM2 WILD-TYPE 
             16             130 
  CADM2 MUTATED CADM2 WILD-TYPE 
             16             130 
[1] "OR51S1 MUTATION ANALYSIS"
[1] 3
  OR51S1 MUTATED OR51S1 WILD-TYPE 
              16              130 
  OR51S1 MUTATED OR51S1 WILD-TYPE 
              16              130 
[1] "LCE1B MUTATION ANALYSIS"
[1] 3
  LCE1B MUTATED LCE1B WILD-TYPE 
             10             136 
  LCE1B MUTATED LCE1B WILD-TYPE 
             10             136 
[1] "IDH1 MUTATION ANALYSIS"
[1] 3
  IDH1 MUTATED IDH1 WILD-TYPE 
             7            139 
  IDH1 MUTATED IDH1 WILD-TYPE 
             7            139 
[1] "TAF1A MUTATION ANALYSIS"
[1] 3
  TAF1A MUTATED TAF1A WILD-TYPE 
              8             138 
  TAF1A MUTATED TAF1A WILD-TYPE 
              8             138 
[1] "NAP1L2 MUTATION ANALYSIS"
[1] 3
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
              14              132 
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
              14              132 
[1] "MUC7 MUTATION ANALYSIS"
[1] 3
  MUC7 MUTATED MUC7 WILD-TYPE 
            11            135 
  MUC7 MUTATED MUC7 WILD-TYPE 
            11            135 
[1] "PPP6C MUTATION ANALYSIS"
[1] 3
  PPP6C MUTATED PPP6C WILD-TYPE 
             14             132 
  PPP6C MUTATED PPP6C WILD-TYPE 
             14             132 
[1] "FRG2B MUTATION ANALYSIS"
[1] 3
  FRG2B MUTATED FRG2B WILD-TYPE 
             10             136 
  FRG2B MUTATED FRG2B WILD-TYPE 
             10             136 
[1] "USP29 MUTATION ANALYSIS"
[1] 3
  USP29 MUTATED USP29 WILD-TYPE 
             25             121 
  USP29 MUTATED USP29 WILD-TYPE 
             25             121 
[1] "PRB4 MUTATION ANALYSIS"
[1] 3
  PRB4 MUTATED PRB4 WILD-TYPE 
            16            130 
  PRB4 MUTATED PRB4 WILD-TYPE 
            16            130 
[1] "HIST1H2AA MUTATION ANALYSIS"
[1] 3
  HIST1H2AA MUTATED HIST1H2AA WILD-TYPE 
                  7                 139 
  HIST1H2AA MUTATED HIST1H2AA WILD-TYPE 
                  7                 139 
[1] "RPTN MUTATION ANALYSIS"
[1] 3
  RPTN MUTATED RPTN WILD-TYPE 
            23            123 
  RPTN MUTATED RPTN WILD-TYPE 
            23            123 
[1] "ZNF479 MUTATION ANALYSIS"
[1] 3
  ZNF479 MUTATED ZNF479 WILD-TYPE 
              13              133 
  ZNF479 MUTATED ZNF479 WILD-TYPE 
              13              133 
[1] "C8A MUTATION ANALYSIS"
[1] 3
  C8A MUTATED C8A WILD-TYPE 
           19           127 
  C8A MUTATED C8A WILD-TYPE 
           19           127 
[1] "FUT9 MUTATION ANALYSIS"
[1] 3
  FUT9 MUTATED FUT9 WILD-TYPE 
            16            130 
  FUT9 MUTATED FUT9 WILD-TYPE 
            16            130 
[1] "ZNF679 MUTATION ANALYSIS"
[1] 3
  ZNF679 MUTATED ZNF679 WILD-TYPE 
              15              131 
  ZNF679 MUTATED ZNF679 WILD-TYPE 
              15              131 
[1] "NRK MUTATION ANALYSIS"
[1] 3
  NRK MUTATED NRK WILD-TYPE 
           18           128 
  NRK MUTATED NRK WILD-TYPE 
           18           128 
[1] "CDH9 MUTATION ANALYSIS"
[1] 3
  CDH9 MUTATED CDH9 WILD-TYPE 
            26            120 
  CDH9 MUTATED CDH9 WILD-TYPE 
            26            120 
[1] "PRAMEF11 MUTATION ANALYSIS"
[1] 3
  PRAMEF11 MUTATED PRAMEF11 WILD-TYPE 
                13                133 
  PRAMEF11 MUTATED PRAMEF11 WILD-TYPE 
                13                133 
[1] "DDX3X MUTATION ANALYSIS"
[1] 3
  DDX3X MUTATED DDX3X WILD-TYPE 
             15             131 
  DDX3X MUTATED DDX3X WILD-TYPE 
             15             131 
[1] "GRXCR1 MUTATION ANALYSIS"
[1] 3
  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
              15              131 
  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
              15              131 
[1] "PRB2 MUTATION ANALYSIS"
[1] 3
  PRB2 MUTATED PRB2 WILD-TYPE 
            21            125 
  PRB2 MUTATED PRB2 WILD-TYPE 
            21            125 
[1] "ELF5 MUTATION ANALYSIS"
[1] 3
  ELF5 MUTATED ELF5 WILD-TYPE 
             4            142 
  ELF5 MUTATED ELF5 WILD-TYPE 
             4            142 
[1] "IL32 MUTATION ANALYSIS"
[1] 3
  IL32 MUTATED IL32 WILD-TYPE 
             6            140 
  IL32 MUTATED IL32 WILD-TYPE 
             6            140 
[1] "LUZP2 MUTATION ANALYSIS"
[1] 3
  LUZP2 MUTATED LUZP2 WILD-TYPE 
             13             133 
  LUZP2 MUTATED LUZP2 WILD-TYPE 
             13             133 
[1] "PDE1A MUTATION ANALYSIS"
[1] 3
  PDE1A MUTATED PDE1A WILD-TYPE 
             23             123 
  PDE1A MUTATED PDE1A WILD-TYPE 
             23             123 
[1] "RBM11 MUTATION ANALYSIS"
[1] 3
  RBM11 MUTATED RBM11 WILD-TYPE 
             10             136 
  RBM11 MUTATED RBM11 WILD-TYPE 
             10             136 
[1] "GLRB MUTATION ANALYSIS"
[1] 3
  GLRB MUTATED GLRB WILD-TYPE 
            16            130 
  GLRB MUTATED GLRB WILD-TYPE 
            16            130 
[1] "PRB1 MUTATION ANALYSIS"
[1] 3
  PRB1 MUTATED PRB1 WILD-TYPE 
            12            134 
  PRB1 MUTATED PRB1 WILD-TYPE 
            12            134 
[1] "KIAA1257 MUTATION ANALYSIS"
[1] 3
  KIAA1257 MUTATED KIAA1257 WILD-TYPE 
                 7                139 
  KIAA1257 MUTATED KIAA1257 WILD-TYPE 
                 7                139 
[1] "USP17L2 MUTATION ANALYSIS"
[1] 3
  USP17L2 MUTATED USP17L2 WILD-TYPE 
               13               133 
  USP17L2 MUTATED USP17L2 WILD-TYPE 
               13               133 
[1] "SPAG16 MUTATION ANALYSIS"
[1] 3
  SPAG16 MUTATED SPAG16 WILD-TYPE 
              13              133 
  SPAG16 MUTATED SPAG16 WILD-TYPE 
              13              133 
[1] "OR4M2 MUTATION ANALYSIS"
[1] 3
  OR4M2 MUTATED OR4M2 WILD-TYPE 
             17             129 
  OR4M2 MUTATED OR4M2 WILD-TYPE 
             17             129 
[1] "GFRAL MUTATION ANALYSIS"
[1] 3
  GFRAL MUTATED GFRAL WILD-TYPE 
             20             126 
  GFRAL MUTATED GFRAL WILD-TYPE 
             20             126 
[1] "UNC119B MUTATION ANALYSIS"
[1] 3
  UNC119B MUTATED UNC119B WILD-TYPE 
                3               143 
  UNC119B MUTATED UNC119B WILD-TYPE 
                3               143 
[1] "PHGDH MUTATION ANALYSIS"
[1] 3
  PHGDH MUTATED PHGDH WILD-TYPE 
              5             141 
  PHGDH MUTATED PHGDH WILD-TYPE 
              5             141 
[1] "STXBP5L MUTATION ANALYSIS"
[1] 3
  STXBP5L MUTATED STXBP5L WILD-TYPE 
               31               115 
  STXBP5L MUTATED STXBP5L WILD-TYPE 
               31               115 
[1] "TRAT1 MUTATION ANALYSIS"
[1] 3
  TRAT1 MUTATED TRAT1 WILD-TYPE 
             10             136 
  TRAT1 MUTATED TRAT1 WILD-TYPE 
             10             136 
[1] "ZNF844 MUTATION ANALYSIS"
[1] 3
  ZNF844 MUTATED ZNF844 WILD-TYPE 
               4              142 
  ZNF844 MUTATED ZNF844 WILD-TYPE 
               4              142 
[1] "TTN MUTATION ANALYSIS"
[1] 3
  TTN MUTATED TTN WILD-TYPE 
          114            32 
  TTN MUTATED TTN WILD-TYPE 
          114            32 
[1] "DSG3 MUTATION ANALYSIS"
[1] 3
  DSG3 MUTATED DSG3 WILD-TYPE 
            34            112 
  DSG3 MUTATED DSG3 WILD-TYPE 
            34            112 
[1] "GML MUTATION ANALYSIS"
[1] 3
  GML MUTATED GML WILD-TYPE 
            8           138 
  GML MUTATED GML WILD-TYPE 
            8           138 
[1] "HHLA2 MUTATION ANALYSIS"
[1] 3
  HHLA2 MUTATED HHLA2 WILD-TYPE 
              9             137 
  HHLA2 MUTATED HHLA2 WILD-TYPE 
              9             137 
[1] "LILRB4 MUTATION ANALYSIS"
[1] 3
  LILRB4 MUTATED LILRB4 WILD-TYPE 
              22              124 
  LILRB4 MUTATED LILRB4 WILD-TYPE 
              22              124 
[1] "SLC38A4 MUTATION ANALYSIS"
[1] 3
  SLC38A4 MUTATED SLC38A4 WILD-TYPE 
               16               130 
  SLC38A4 MUTATED SLC38A4 WILD-TYPE 
               16               130 
[1] "OR2L3 MUTATION ANALYSIS"
[1] 3
  OR2L3 MUTATED OR2L3 WILD-TYPE 
             12             134 
  OR2L3 MUTATED OR2L3 WILD-TYPE 
             12             134 
[1] "HBD MUTATION ANALYSIS"
[1] 3
  HBD MUTATED HBD WILD-TYPE 
            8           138 
  HBD MUTATED HBD WILD-TYPE 
            8           138 
[1] "TBC1D3B MUTATION ANALYSIS"
[1] 3
  TBC1D3B MUTATED TBC1D3B WILD-TYPE 
                3               143 
  TBC1D3B MUTATED TBC1D3B WILD-TYPE 
                3               143 
[1] "TCEB3C MUTATION ANALYSIS"
[1] 3
  TCEB3C MUTATED TCEB3C WILD-TYPE 
              22              124 
  TCEB3C MUTATED TCEB3C WILD-TYPE 
              22              124 
[1] "CYLC2 MUTATION ANALYSIS"
[1] 3
  CYLC2 MUTATED CYLC2 WILD-TYPE 
             16             130 
  CYLC2 MUTATED CYLC2 WILD-TYPE 
             16             130 
[1] "HBG2 MUTATION ANALYSIS"
[1] 3
  HBG2 MUTATED HBG2 WILD-TYPE 
             6            140 
  HBG2 MUTATED HBG2 WILD-TYPE 
             6            140 
[1] "LOC649330 MUTATION ANALYSIS"
[1] 3
  LOC649330 MUTATED LOC649330 WILD-TYPE 
                 16                 130 
  LOC649330 MUTATED LOC649330 WILD-TYPE 
                 16                 130 
[1] "PARM1 MUTATION ANALYSIS"
[1] 3
  PARM1 MUTATED PARM1 WILD-TYPE 
             11             135 
  PARM1 MUTATED PARM1 WILD-TYPE 
             11             135 
[1] "CCK MUTATION ANALYSIS"
[1] 3
  CCK MUTATED CCK WILD-TYPE 
            5           141 
  CCK MUTATED CCK WILD-TYPE 
            5           141 
[1] "ZFP106 MUTATION ANALYSIS"
[1] 3
  ZFP106 MUTATED ZFP106 WILD-TYPE 
               5              141 
  ZFP106 MUTATED ZFP106 WILD-TYPE 
               5              141 
[1] "UGT2B15 MUTATION ANALYSIS"
[1] 3
  UGT2B15 MUTATED UGT2B15 WILD-TYPE 
               14               132 
  UGT2B15 MUTATED UGT2B15 WILD-TYPE 
               14               132 
[1] "DSG1 MUTATION ANALYSIS"
[1] 3
  DSG1 MUTATED DSG1 WILD-TYPE 
            22            124 
  DSG1 MUTATED DSG1 WILD-TYPE 
            22            124 
[1] "ARL16 MUTATION ANALYSIS"
[1] 3
  ARL16 MUTATED ARL16 WILD-TYPE 
              4             142 
  ARL16 MUTATED ARL16 WILD-TYPE 
              4             142 
[1] "VEGFC MUTATION ANALYSIS"
[1] 3
  VEGFC MUTATED VEGFC WILD-TYPE 
             14             132 
  VEGFC MUTATED VEGFC WILD-TYPE 
             14             132 
[1] "PSG4 MUTATION ANALYSIS"
[1] 3
  PSG4 MUTATED PSG4 WILD-TYPE 
            15            131 
  PSG4 MUTATED PSG4 WILD-TYPE 
            15            131 
[1] "DEFB119 MUTATION ANALYSIS"
[1] 3
  DEFB119 MUTATED DEFB119 WILD-TYPE 
                6               140 
  DEFB119 MUTATED DEFB119 WILD-TYPE 
                6               140 
[1] "KLHL4 MUTATION ANALYSIS"
[1] 3
  KLHL4 MUTATED KLHL4 WILD-TYPE 
             14             132 
  KLHL4 MUTATED KLHL4 WILD-TYPE 
             14             132 
[1] "EIF3D MUTATION ANALYSIS"
[1] 3
  EIF3D MUTATED EIF3D WILD-TYPE 
              3             143 
  EIF3D MUTATED EIF3D WILD-TYPE 
              3             143 
[1] "OR2W1 MUTATION ANALYSIS"
[1] 3
  OR2W1 MUTATED OR2W1 WILD-TYPE 
             12             134 
  OR2W1 MUTATED OR2W1 WILD-TYPE 
             12             134 
[1] "OR4N2 MUTATION ANALYSIS"
[1] 3
  OR4N2 MUTATED OR4N2 WILD-TYPE 
             17             129 
  OR4N2 MUTATED OR4N2 WILD-TYPE 
             17             129 
[1] "CCDC11 MUTATION ANALYSIS"
[1] 3
  CCDC11 MUTATED CCDC11 WILD-TYPE 
              13              133 
  CCDC11 MUTATED CCDC11 WILD-TYPE 
              13              133 
[1] "LIN7A MUTATION ANALYSIS"
[1] 3
  LIN7A MUTATED LIN7A WILD-TYPE 
              8             138 
  LIN7A MUTATED LIN7A WILD-TYPE 
              8             138 
[1] "RAPGEF5 MUTATION ANALYSIS"
[1] 3
  RAPGEF5 MUTATED RAPGEF5 WILD-TYPE 
                6               140 
  RAPGEF5 MUTATED RAPGEF5 WILD-TYPE 
                6               140 
[1] "CD2 MUTATION ANALYSIS"
[1] 3
  CD2 MUTATED CD2 WILD-TYPE 
           14           132 
  CD2 MUTATED CD2 WILD-TYPE 
           14           132 
[1] "C2ORF40 MUTATION ANALYSIS"
[1] 3
  C2ORF40 MUTATED C2ORF40 WILD-TYPE 
                4               142 
  C2ORF40 MUTATED C2ORF40 WILD-TYPE 
                4               142 
[1] "SGCZ MUTATION ANALYSIS"
[1] 3
  SGCZ MUTATED SGCZ WILD-TYPE 
            16            130 
  SGCZ MUTATED SGCZ WILD-TYPE 
            16            130 
[1] "SPANXN2 MUTATION ANALYSIS"
[1] 3
  SPANXN2 MUTATED SPANXN2 WILD-TYPE 
               13               133 
  SPANXN2 MUTATED SPANXN2 WILD-TYPE 
               13               133 
[1] "TLL1 MUTATION ANALYSIS"
[1] 3
  TLL1 MUTATED TLL1 WILD-TYPE 
            31            115 
  TLL1 MUTATED TLL1 WILD-TYPE 
            31            115 
[1] "C9ORF119 MUTATION ANALYSIS"
[1] 3
  C9ORF119 MUTATED C9ORF119 WILD-TYPE 
                 5                141 
  C9ORF119 MUTATED C9ORF119 WILD-TYPE 
                 5                141 
[1] "CCDC54 MUTATION ANALYSIS"
[1] 3
  CCDC54 MUTATED CCDC54 WILD-TYPE 
              10              136 
  CCDC54 MUTATED CCDC54 WILD-TYPE 
              10              136 
[1] "DEFB118 MUTATION ANALYSIS"
[1] 3
  DEFB118 MUTATED DEFB118 WILD-TYPE 
                6               140 
  DEFB118 MUTATED DEFB118 WILD-TYPE 
                6               140 
[1] "HTR3B MUTATION ANALYSIS"
[1] 3
  HTR3B MUTATED HTR3B WILD-TYPE 
             10             136 
  HTR3B MUTATED HTR3B WILD-TYPE 
             10             136 
[1] "MARCH11 MUTATION ANALYSIS"
[1] 3
  MARCH11 MUTATED MARCH11 WILD-TYPE 
                7               139 
  MARCH11 MUTATED MARCH11 WILD-TYPE 
                7               139 
[1] "MKX MUTATION ANALYSIS"
[1] 3
  MKX MUTATED MKX WILD-TYPE 
           10           136 
  MKX MUTATED MKX WILD-TYPE 
           10           136 
[1] "OR5H2 MUTATION ANALYSIS"
[1] 3
  OR5H2 MUTATED OR5H2 WILD-TYPE 
             11             135 
  OR5H2 MUTATED OR5H2 WILD-TYPE 
             11             135 
[1] "SIGLEC14 MUTATION ANALYSIS"
[1] 3
  SIGLEC14 MUTATED SIGLEC14 WILD-TYPE 
                 6                140 
  SIGLEC14 MUTATED SIGLEC14 WILD-TYPE 
                 6                140 
[1] "TUBB8 MUTATION ANALYSIS"
[1] 3
  TUBB8 MUTATED TUBB8 WILD-TYPE 
              7             139 
  TUBB8 MUTATED TUBB8 WILD-TYPE 
              7             139 
[1] "ZIM3 MUTATION ANALYSIS"
[1] 3
  ZIM3 MUTATED ZIM3 WILD-TYPE 
            12            134 
  ZIM3 MUTATED ZIM3 WILD-TYPE 
            12            134 
[1] "PRC1 MUTATION ANALYSIS"
[1] 3
  PRC1 MUTATED PRC1 WILD-TYPE 
             7            139 
  PRC1 MUTATED PRC1 WILD-TYPE 
             7            139 
[1] "MUM1L1 MUTATION ANALYSIS"
[1] 3
  MUM1L1 MUTATED MUM1L1 WILD-TYPE 
              15              131 
  MUM1L1 MUTATED MUM1L1 WILD-TYPE 
              15              131 
[1] "TRIM58 MUTATION ANALYSIS"
[1] 3
  TRIM58 MUTATED TRIM58 WILD-TYPE 
              12              134 
  TRIM58 MUTATED TRIM58 WILD-TYPE 
              12              134 
[1] "ANKRD20A4 MUTATION ANALYSIS"
[1] 3
  ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE 
                  3                 143 
  ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE 
                  3                 143 
[1] "OR5J2 MUTATION ANALYSIS"
[1] 3
  OR5J2 MUTATED OR5J2 WILD-TYPE 
             10             136 
  OR5J2 MUTATED OR5J2 WILD-TYPE 
             10             136 
[1] "CLEC14A MUTATION ANALYSIS"
[1] 3
  CLEC14A MUTATED CLEC14A WILD-TYPE 
               14               132 
  CLEC14A MUTATED CLEC14A WILD-TYPE 
               14               132 
[1] "FAM19A1 MUTATION ANALYSIS"
[1] 3
  FAM19A1 MUTATED FAM19A1 WILD-TYPE 
                7               139 
  FAM19A1 MUTATED FAM19A1 WILD-TYPE 
                7               139 
[1] "GK2 MUTATION ANALYSIS"
[1] 3
  GK2 MUTATED GK2 WILD-TYPE 
           19           127 
  GK2 MUTATED GK2 WILD-TYPE 
           19           127 
[1] "LONRF2 MUTATION ANALYSIS"
[1] 3
  LONRF2 MUTATED LONRF2 WILD-TYPE 
              11              135 
  LONRF2 MUTATED LONRF2 WILD-TYPE 
              11              135 
[1] "HAPLN1 MUTATION ANALYSIS"
[1] 3
  HAPLN1 MUTATED HAPLN1 WILD-TYPE 
               7              139 
  HAPLN1 MUTATED HAPLN1 WILD-TYPE 
               7              139 
[1] "NAP1L4 MUTATION ANALYSIS"
[1] 3
  NAP1L4 MUTATED NAP1L4 WILD-TYPE 
               5              141 
  NAP1L4 MUTATED NAP1L4 WILD-TYPE 
               5              141 
[1] "CLCC1 MUTATION ANALYSIS"
[1] 3
  CLCC1 MUTATED CLCC1 WILD-TYPE 
              7             139 
  CLCC1 MUTATED CLCC1 WILD-TYPE 
              7             139 
[1] "OR52J3 MUTATION ANALYSIS"
[1] 3
  OR52J3 MUTATED OR52J3 WILD-TYPE 
               9              137 
  OR52J3 MUTATED OR52J3 WILD-TYPE 
               9              137 
[1] "TMCO5A MUTATION ANALYSIS"
[1] 3
  TMCO5A MUTATED TMCO5A WILD-TYPE 
               6              140 
  TMCO5A MUTATED TMCO5A WILD-TYPE 
               6              140 
[1] "C4ORF22 MUTATION ANALYSIS"
[1] 3
  C4ORF22 MUTATED C4ORF22 WILD-TYPE 
                8               138 
  C4ORF22 MUTATED C4ORF22 WILD-TYPE 
                8               138 
[1] "MAP2K1 MUTATION ANALYSIS"
[1] 3
  MAP2K1 MUTATED MAP2K1 WILD-TYPE 
               6              140 
  MAP2K1 MUTATED MAP2K1 WILD-TYPE 
               6              140 
[1] "OR7D2 MUTATION ANALYSIS"
[1] 3
  OR7D2 MUTATED OR7D2 WILD-TYPE 
             13             133 
  OR7D2 MUTATED OR7D2 WILD-TYPE 
             13             133 
[1] "CXCR2 MUTATION ANALYSIS"
[1] 3
  CXCR2 MUTATED CXCR2 WILD-TYPE 
              9             137 
  CXCR2 MUTATED CXCR2 WILD-TYPE 
              9             137 
[1] "RBM22 MUTATION ANALYSIS"
[1] 3
  RBM22 MUTATED RBM22 WILD-TYPE 
              4             142 
  RBM22 MUTATED RBM22 WILD-TYPE 
              4             142 
[1] "CX3CL1 MUTATION ANALYSIS"
[1] 3
  CX3CL1 MUTATED CX3CL1 WILD-TYPE 
               3              143 
  CX3CL1 MUTATED CX3CL1 WILD-TYPE 
               3              143 
[1] "IGF2BP3 MUTATION ANALYSIS"
[1] 3
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
                3               143 
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
                3               143 
[1] "KLRC3 MUTATION ANALYSIS"
[1] 3
  KLRC3 MUTATED KLRC3 WILD-TYPE 
              4             142 
  KLRC3 MUTATED KLRC3 WILD-TYPE 
              4             142 
[1] "LRRIQ4 MUTATION ANALYSIS"
[1] 3
  LRRIQ4 MUTATED LRRIQ4 WILD-TYPE 
              14              132 
  LRRIQ4 MUTATED LRRIQ4 WILD-TYPE 
              14              132 
[1] "NR1H4 MUTATION ANALYSIS"
[1] 3
  NR1H4 MUTATED NR1H4 WILD-TYPE 
              8             138 
  NR1H4 MUTATED NR1H4 WILD-TYPE 
              8             138 
[1] "OR4A15 MUTATION ANALYSIS"
[1] 3
  OR4A15 MUTATED OR4A15 WILD-TYPE 
              14              132 
  OR4A15 MUTATED OR4A15 WILD-TYPE 
              14              132 
[1] "MAGEA4 MUTATION ANALYSIS"
[1] 3
  MAGEA4 MUTATED MAGEA4 WILD-TYPE 
               7              139 
  MAGEA4 MUTATED MAGEA4 WILD-TYPE 
               7              139 
[1] "DGAT2L6 MUTATION ANALYSIS"
[1] 3
  DGAT2L6 MUTATED DGAT2L6 WILD-TYPE 
                8               138 
  DGAT2L6 MUTATED DGAT2L6 WILD-TYPE 
                8               138 
[1] "RGS18 MUTATION ANALYSIS"
[1] 3
  RGS18 MUTATED RGS18 WILD-TYPE 
              7             139 
  RGS18 MUTATED RGS18 WILD-TYPE 
              7             139 
[1] "TSGA13 MUTATION ANALYSIS"
[1] 3
  TSGA13 MUTATED TSGA13 WILD-TYPE 
               6              140 
  TSGA13 MUTATED TSGA13 WILD-TYPE 
               6              140 
[1] "OPN5 MUTATION ANALYSIS"
[1] 3
  OPN5 MUTATED OPN5 WILD-TYPE 
             5            141 
  OPN5 MUTATED OPN5 WILD-TYPE 
             5            141 
[1] "SPINK13 MUTATION ANALYSIS"
[1] 3
  SPINK13 MUTATED SPINK13 WILD-TYPE 
                4               142 
  SPINK13 MUTATED SPINK13 WILD-TYPE 
                4               142 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "GENDER"                                
 [7] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [8] "RADIATIONTHERAPY"                      
 [9] "RADIATIONS.RADIATION.REGIMENINDICATION"
[10] "DISTANT.METASTASIS"                    
[11] "LYMPH.NODE.METASTASIS"                 
[12] "TUMOR.STAGECODE"                       
[13] "NEOPLASM.DISEASESTAGE"                 
[14] "BATCHNUMBER"                           

Input Data has 14 rows and 146 columns.

[1] "Batch" "14"   
[1] "Last Follow UP"
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
        3687           NA         2167           NA          653         4511 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
        1513           82          194         1487           NA         3564 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
          NA         5926           NA           NA         3265         1861 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
          NA           NA          713           NA          870           NA 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
        6553          477           NA           NA           NA           NA 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
          NA           NA         3335         2399           NA           NA 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
        1455           NA         1205          979           NA         1349 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
          NA         1716         1136          440         1700        10523 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
          NA           NA           NA         2401          743           NA 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
        1787         1446         1315         9567         4134         5536 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
         686         2717         1664         1673         2296         2766 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
        3101           NA          435         1691          595         2042 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
          NA         3931           NA           NA           NA           NA 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
          NA           NA           NA           NA           NA         4403 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
        6175           NA           NA         7562           NA         3150 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
        4150         1265         1620          129         3733          786 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
         112          813           NA          714           NA           NA 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A19O TCGA-ER-A1A1 
          NA           NA           NA         1340           NA         2433 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
        2443           NA           NA           NA           NA           NA 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD 
          NA           NA           NA           NA           NA           NA 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
        1225           NA           NA           NA           NA           NA 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
        3080           NA           NA           NA         4525         1617 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
          NA         1505           NA           NA            6           NA 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
        3664           NA         2577           NA           NA           NA 
TCGA-GN-A26A TCGA-GN-A26D 
          NA         1204 
Variable 1:'AGE':	nDistinctValues=61,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=71,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=72,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=25,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 8:'RADIATION.THERAPY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 9:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'DISTANT.METASTASIS':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'LYMPH.NODE.METASTASIS':	nDistinctValues=9,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'TUMOR.STAGECODE':	nDistinctValues=15,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 13:'NEOPLASM.DISEASESTAGE':	nDistinctValues=12,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 14:'BATCH.NUMBER':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                   "GENDER"                "DISTANT.METASTASIS"   
[4] "LYMPH.NODE.METASTASIS" "TUMOR.STAGECODE"       "NEOPLASM.DISEASESTAGE"
[1] "TUMOR.?STAGE" "5"           
[1] "stage2"
vv
 T0  T1 T1A T1B  T2 T2A T2B  T3 T3A T3B  T4 T4A T4B TIS  TX 
  4   3  13   2  17  12   6   4  19  11   4   6  20   1   8 
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 146 columns, 1 survival variables, and 6 non-survival variables.
AGE, nv=61, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE
DISTANT.METASTASIS, nv=5, binary=FALSE, numeric=FALSE
LYMPH.NODE.METASTASIS, nv=9, binary=FALSE, numeric=FALSE
TUMOR.STAGECODE, nv=0, binary=FALSE, numeric=TRUE
NEOPLASM.DISEASESTAGE, nv=12, binary=FALSE, numeric=FALSE

Clustering(1) Variable = TP53 MUTATION ANALYSIS
D1V1, survival
                sevent
clus2             0  1
  TP53 MUTATED   15 10
  TP53 WILD-TYPE 57 61
  TP53 MUTATED TP53 WILD-TYPE 
            25            118 
  TP53 MUTATED TP53 WILD-TYPE 
            10             61 
$`TP53 MUTATED`
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I5 TCGA-EE-A181 TCGA-EE-A29E TCGA-EE-A29L 
       48.89        36.03       107.34        33.73        39.62         2.56 
TCGA-EE-A29M TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A2 TCGA-EE-A2GC TCGA-EE-A2GJ 
       44.35        25.87        17.92        24.43        43.23        89.33 
TCGA-EE-A2GP TCGA-EE-A2GT TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MU TCGA-EE-A3AA 
       13.87        19.56       167.87        43.23        53.26         4.24 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-ER-A3ET TCGA-FS-A1Z4 TCGA-FS-A1ZW 
        3.68        26.73        23.47        80.32        28.08        49.48 
TCGA-GN-A266 
       10.09 

$`TP53 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
       49.74         2.70         6.38       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
      176.55        35.93        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       68.09        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
        8.65        14.70        26.86         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29N 
      168.26        63.32        47.84        13.97        32.19        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A2A0 
       56.42        37.35        14.47        55.89       345.96        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       78.94        39.25        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        22.55        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
      101.95        14.30        55.59        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN 
       16.96       204.62        96.23       144.76       203.01        47.54 
TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AB TCGA-EE-A3AC 
      248.61       103.56       136.44        41.59       122.73        25.84 
TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       13.81       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       44.05        79.99       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       20.91         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY 
       74.73        11.41       148.77        53.16        26.56        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  TP53 MUTATED TP53 WILD-TYPE 
          2.56           0.20 
  TP53 MUTATED TP53 WILD-TYPE 
        167.87         345.96 
  TP53 MUTATED TP53 WILD-TYPE 
         33.73          53.34 
[1] "2.6 - 167.9 (33.7)" "0.2 - 346.0 (53.3)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"TP53 WILD-TYPE"   "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"TP53 WILD-TYPE"   "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"TP53 WILD-TYPE"   "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
  "TP53 MUTATED"   "TP53 MUTATED" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
[1] "hr=" "1.3"
D1V2, continuous
D1V3, binary
                cls
clus              0  1
  TP53 MUTATED   10 15
  TP53 WILD-TYPE 47 74
[1] "tbl2"
                cls
clus             [,1] [,2]
  TP53 MUTATED     10   15
  TP53 WILD-TYPE   47   74
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  FEMALE           10             47
  MALE             15             74
                vv
clus              M0  M1 M1A M1B M1C
  TP53 MUTATED    20   0   0   0   1
  TP53 WILD-TYPE 104   2   1   1   1
D1V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  TP53 MUTATED   11  0   3   4   1   1   0  1  0
  TP53 WILD-TYPE 70  2   4   8   2   8   5  9  2
D1V5, multiclass
D1V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TP53 MUTATED         2        3        2        1         1         1
  TP53 WILD-TYPE      15        6        9       17         6         7
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  TP53 MUTATED           0         0          2          6          2        1
  TP53 WILD-TYPE         7         5          4         10         14        3
D1V7, multiclass

Clustering(2) Variable = BRAF MUTATION ANALYSIS
D2V1, survival
                sevent
clus2             0  1
  BRAF MUTATED   39 32
  BRAF WILD-TYPE 33 39
  BRAF MUTATED BRAF WILD-TYPE 
            71             72 
  BRAF MUTATED BRAF WILD-TYPE 
            32             39 
$`BRAF MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A1JW TCGA-D9-A1JX 
      121.22        58.03         9.30       148.31         2.70         6.38 
TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 
       36.03       117.17        20.38       176.55        35.93       107.34 
TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A181 
       61.18        53.92        23.44       215.44        15.68        33.73 
TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
       26.86       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29T 
       39.62        32.19        44.35        18.58        56.42       345.96 
TCGA-EE-A2A0 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GH 
       46.82        58.75        47.54        43.23       135.91       182.01 
TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M5 
       89.33        75.48       101.95        55.59        19.56        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
      129.24        28.80        19.76       103.27       103.17        16.96 
TCGA-EE-A2MK TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD 
      144.76       248.61        43.23         4.24       122.73         3.68 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J TCGA-FS-A1YX 
       13.81        23.47       138.77        26.37         6.41        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z7 TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZM 
      228.59         7.76        53.52        15.45        32.71       101.26 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZZ TCGA-GN-A262 TCGA-GN-A265 
       11.41       148.77        27.02       120.46        84.72 

$`BRAF WILD-TYPE`
TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A149 TCGA-DA-A1HV TCGA-DA-A1I1 TCGA-DA-A1IA 
       71.24        21.47        49.74        48.89       194.83        65.92 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 
       68.09        28.60        10.49        29.82         8.65        14.70 
TCGA-EE-A185 TCGA-EE-A29D TCGA-EE-A29L TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
        4.93        13.97         2.56        37.35        14.47        55.89 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GD 
       25.87        17.92        78.94        24.43        39.25       314.53 
TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR 
       22.55        54.71        55.00        90.94        13.87        14.30 
TCGA-EE-A2GU TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML 
       67.13        61.51        47.28       204.62        96.23       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      167.87        47.54       103.56       136.44        41.59        53.26 
TCGA-EE-A3AC TCGA-EE-A3AE TCGA-ER-A19D TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       25.84        26.73        12.59       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA 
       80.32       216.92       202.62        20.91        28.08        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP 
       48.85        40.27         9.70        47.38        23.93        74.73 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 
       53.16        26.56        49.48        27.06         0.20        76.41 
TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        10.09        64.41        62.76        32.48        39.58 

  BRAF MUTATED BRAF WILD-TYPE 
           2.7            0.2 
  BRAF MUTATED BRAF WILD-TYPE 
        345.96         314.53 
  BRAF MUTATED BRAF WILD-TYPE 
         48.59          47.33 
[1] "2.7 - 346.0 (48.6)" "0.2 - 314.5 (47.3)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
  "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
  "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
  "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
  "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
  "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
  "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
  "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
  "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
  "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
  "BRAF MUTATED" "BRAF WILD-TYPE"   "BRAF MUTATED"   "BRAF MUTATED" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE"   "BRAF MUTATED" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"BRAF WILD-TYPE"   "BRAF MUTATED" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"BRAF WILD-TYPE" "BRAF WILD-TYPE" "BRAF WILD-TYPE" 
[1] "hr=" "1.4"
D2V2, continuous
D2V3, binary
                cls
clus              0  1
  BRAF MUTATED   28 45
  BRAF WILD-TYPE 29 44
[1] "tbl2"
                cls
clus             [,1] [,2]
  BRAF MUTATED     28   45
  BRAF WILD-TYPE   29   44
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  FEMALE           28             29
  MALE             45             44
                vv
clus             M0 M1 M1A M1B M1C
  BRAF MUTATED   60  1   1   1   2
  BRAF WILD-TYPE 64  1   0   0   0
D2V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  BRAF MUTATED   40  1   2   4   2   5   3  6  2
  BRAF WILD-TYPE 41  1   5   8   1   4   2  4  0
D2V5, multiclass
D2V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  BRAF MUTATED        10        3        5       10         4         2
  BRAF WILD-TYPE       7        6        6        8         3         6
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  BRAF MUTATED           3         3          3          6          7        3
  BRAF WILD-TYPE         4         2          3         10          9        1
D2V7, multiclass

Clustering(3) Variable = C15ORF23 MUTATION ANALYSIS
D3V1, survival
                    sevent
clus2                 0  1
  C15ORF23 MUTATED    5  5
  C15ORF23 WILD-TYPE 67 66
  C15ORF23 MUTATED C15ORF23 WILD-TYPE 
                10                133 
  C15ORF23 MUTATED C15ORF23 WILD-TYPE 
                 5                 66 
$`C15ORF23 MUTATED`
TCGA-DA-A1IC TCGA-EE-A181 TCGA-EE-A2A2 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2M5 
       68.09        33.73        24.43        43.23       314.53        21.67 
TCGA-EE-A2MP TCGA-EE-A3AH TCGA-FS-A1ZT TCGA-GN-A266 
      248.61       138.77        53.16        10.09 

$`C15ORF23 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       53.92        65.92        23.44        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GE 
       46.82        78.94        39.25        58.75        47.54       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      182.01        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       90.94       101.95        13.87        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       67.13       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS 
      203.01       167.87        47.54        43.23       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       26.73        13.81        23.47        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      120.46       117.93        84.72        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  C15ORF23 MUTATED C15ORF23 WILD-TYPE 
             10.09               0.20 
  C15ORF23 MUTATED C15ORF23 WILD-TYPE 
            314.53             345.96 
  C15ORF23 MUTATED C15ORF23 WILD-TYPE 
            48.195             47.540 
[1] "10.1 - 314.5 (48.2)" "0.2 - 346.0 (47.5)" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE"   "C15ORF23 MUTATED" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
  "C15ORF23 MUTATED" "C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"C15ORF23 WILD-TYPE" "C15ORF23 WILD-TYPE" 
[1] "hr=" "1.4"
D3V2, continuous
D3V3, binary
                    cls
clus                  0  1
  C15ORF23 MUTATED    3  7
  C15ORF23 WILD-TYPE 54 82
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C15ORF23 MUTATED      3    7
  C15ORF23 WILD-TYPE   54   82
        clus
vv       C15ORF23 MUTATED C15ORF23 WILD-TYPE
  FEMALE                3                 54
  MALE                  7                 82
                    vv
clus                  M0  M1 M1A M1B M1C
  C15ORF23 MUTATED     9   0   0   0   0
  C15ORF23 WILD-TYPE 115   2   1   1   2
D3V4, multiclass
                    vv
clus                 N0 N1 N1A N1B N2A N2B N2C N3 NX
  C15ORF23 MUTATED    6  0   0   2   0   0   1  0  0
  C15ORF23 WILD-TYPE 75  2   7  10   3   9   4 10  2
D3V5, multiclass
D3V6, continuous
                    vv
clus                 STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  C15ORF23 MUTATED         2        0        0        2         0         2
  C15ORF23 WILD-TYPE      15        9       11       16         7         6
                    vv
clus                 STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  C15ORF23 MUTATED           0         1          0          2          0
  C15ORF23 WILD-TYPE         7         4          6         14         16
                    vv
clus                 STAGE IV
  C15ORF23 MUTATED          0
  C15ORF23 WILD-TYPE        4
D3V7, multiclass

Clustering(4) Variable = CDKN2A MUTATION ANALYSIS
D4V1, survival
                  sevent
clus2               0  1
  CDKN2A MUTATED   11 10
  CDKN2A WILD-TYPE 61 61
  CDKN2A MUTATED CDKN2A WILD-TYPE 
              21              122 
  CDKN2A MUTATED CDKN2A WILD-TYPE 
              10               61 
$`CDKN2A MUTATED`
TCGA-D3-A3MV TCGA-DA-A1HV TCGA-DA-A1HY TCGA-EE-A181 TCGA-EE-A185 TCGA-EE-A20B 
       21.47        48.89       117.17        33.73         4.93       109.64 
TCGA-EE-A29E TCGA-EE-A29V TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GM TCGA-EE-A2GP 
       39.62        25.87        58.75        43.23        75.48        13.87 
TCGA-EE-A2M5 TCGA-EE-A2MD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19L 
       21.67        47.28        26.73        23.47        12.59       131.08 
TCGA-FS-A1YW TCGA-FS-A1ZW TCGA-GN-A26A 
      216.92        49.48        32.48 

$`CDKN2A WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 
        2.70         6.38        36.03        20.38       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       68.09        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
        8.65        14.70        26.86        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       47.84        13.97        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X 
       56.42        37.35        14.47        55.89       345.96        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GD 
       46.82        78.94        24.43        39.25        47.54       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
       90.94       101.95        14.30        55.59        19.56        67.13 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
      129.24        28.80        19.76        61.51       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF 
       53.26         4.24       122.73        25.84         3.68        13.81 
TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
      138.77        26.37         6.41        44.05        79.99        80.32 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
      148.77        53.16        26.56        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26D 
       62.76        39.58 

  CDKN2A MUTATED CDKN2A WILD-TYPE 
            4.93             0.20 
  CDKN2A MUTATED CDKN2A WILD-TYPE 
          216.92           345.96 
  CDKN2A MUTATED CDKN2A WILD-TYPE 
           39.62            48.72 
[1] "4.9 - 216.9 (39.6)" "0.2 - 346.0 (48.7)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
  "CDKN2A MUTATED" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CDKN2A WILD-TYPE"   "CDKN2A MUTATED" "CDKN2A WILD-TYPE" 
[1] "hr=" "1.1"
D4V2, continuous
D4V3, binary
                  cls
clus                0  1
  CDKN2A MUTATED    9 13
  CDKN2A WILD-TYPE 48 76
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CDKN2A MUTATED      9   13
  CDKN2A WILD-TYPE   48   76
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  FEMALE              9               48
  MALE               13               76
                  vv
clus                M0  M1 M1A M1B M1C
  CDKN2A MUTATED    19   0   0   0   0
  CDKN2A WILD-TYPE 105   2   1   1   2
D4V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  CDKN2A MUTATED   10  0   3   2   1   1   0  2  0
  CDKN2A WILD-TYPE 71  2   4  10   2   8   5  8  2
D4V5, multiclass
D4V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CDKN2A MUTATED         1        2        2        3         0         1
  CDKN2A WILD-TYPE      16        7        9       15         7         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  CDKN2A MUTATED           1         0          1          5          3
  CDKN2A WILD-TYPE         6         5          5         11         13
                  vv
clus               STAGE IV
  CDKN2A MUTATED          0
  CDKN2A WILD-TYPE        4
D4V7, multiclass

Clustering(5) Variable = NRAS MUTATION ANALYSIS
D5V1, survival
                sevent
clus2             0  1
  NRAS MUTATED   21 23
  NRAS WILD-TYPE 51 48
  NRAS MUTATED NRAS WILD-TYPE 
            44             99 
  NRAS MUTATED NRAS WILD-TYPE 
            23             48 
$`NRAS MUTATED`
TCGA-D3-A3MV TCGA-DA-A1HV TCGA-DA-A1I1 TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A185 
       21.47        48.89       194.83        10.49        29.82         4.93 
TCGA-EE-A29L TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X 
        2.56        37.35        14.47        55.89        25.87        17.92 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GD TCGA-EE-A2GJ TCGA-EE-A2GL 
       78.94        24.43        39.25       314.53        89.33        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GU TCGA-EE-A2MC TCGA-EE-A2MD 
       75.48        90.94        13.87        67.13        61.51        47.28 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MU TCGA-EE-A3AC TCGA-ER-A19D 
      203.01       167.87        47.54        53.26        25.84        12.59 
TCGA-ER-A19N TCGA-FS-A1YW TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1ZA TCGA-FS-A1ZB 
       44.05       216.92       202.62        20.91        27.68        48.85 
TCGA-FS-A1ZE TCGA-FS-A1ZP TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
       40.27        74.73        53.16        49.48        27.06        27.02 
TCGA-GN-A267 TCGA-GN-A268 
       64.41        62.76 

$`NRAS WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 
        2.70         6.38        36.03       117.17        20.38       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 
       68.09        28.60       215.44        15.68         8.65        33.73 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       14.70        26.86       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N 
       47.84        13.97        39.62        32.19        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29T TCGA-EE-A2A0 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       56.42       345.96        46.82        58.75        47.54        43.23 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GO TCGA-EE-A2GR 
      135.91       182.01        22.55        54.71       101.95        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        19.56        21.67       129.24        28.80        19.76 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AA 
      248.61        43.23       103.56       136.44        41.59         4.24 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YX 
       26.37         6.41       131.08        79.99        80.32        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG 
      228.59        28.08         7.76        53.52        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        47.38        23.93       101.26        11.41       148.77 
TCGA-FS-A1ZU TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       26.56         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        32.48        39.58 

  NRAS MUTATED NRAS WILD-TYPE 
          2.56           0.20 
  NRAS MUTATED NRAS WILD-TYPE 
        314.53         345.96 
  NRAS MUTATED NRAS WILD-TYPE 
        48.195         47.540 
[1] "2.6 - 314.5 (48.2)" "0.2 - 346.0 (47.5)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
  "NRAS MUTATED"   "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
  "NRAS MUTATED"   "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
  "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
  "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED"   "NRAS MUTATED" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
  "NRAS MUTATED"   "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
  "NRAS MUTATED"   "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
  "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
  "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED"   "NRAS MUTATED" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
  "NRAS MUTATED"   "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
  "NRAS MUTATED"   "NRAS MUTATED"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
  "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"NRAS WILD-TYPE"   "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
  "NRAS MUTATED" "NRAS WILD-TYPE"   "NRAS MUTATED"   "NRAS MUTATED" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE"   "NRAS MUTATED" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "NRAS MUTATED" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
[1] "hr=" "1.1"
D5V2, continuous
D5V3, binary
                cls
clus              0  1
  NRAS MUTATED   17 28
  NRAS WILD-TYPE 40 61
[1] "tbl2"
                cls
clus             [,1] [,2]
  NRAS MUTATED     17   28
  NRAS WILD-TYPE   40   61
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  FEMALE           17             40
  MALE             28             61
                vv
clus             M0 M1 M1A M1B M1C
  NRAS MUTATED   41  0   0   0   0
  NRAS WILD-TYPE 83  2   1   1   2
D5V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  NRAS MUTATED   27  0   3   4   1   2   1  3  0
  NRAS WILD-TYPE 54  2   4   8   2   7   4  7  2
D5V5, multiclass
D5V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  NRAS MUTATED         3        5        5        4         3         5
  NRAS WILD-TYPE      14        4        6       14         4         3
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  NRAS MUTATED           2         1          1          7          5        0
  NRAS WILD-TYPE         5         4          5          9         11        4
D5V7, multiclass

Clustering(6) Variable = OXA1L MUTATION ANALYSIS
D6V1, survival
                 sevent
clus2              0  1
  OXA1L MUTATED    2  2
  OXA1L WILD-TYPE 70 69
  OXA1L MUTATED OXA1L WILD-TYPE 
              4             139 
  OXA1L MUTATED OXA1L WILD-TYPE 
              2              69 
$`OXA1L MUTATED`
TCGA-DA-A1IA TCGA-EE-A181 TCGA-EE-A2GB TCGA-EE-A2MS 
       65.92        33.73        47.54       136.44 

$`OXA1L WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       53.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC 
       46.82        78.94        24.43        39.25        58.75        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       55.00        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  OXA1L MUTATED OXA1L WILD-TYPE 
          33.73            0.20 
  OXA1L MUTATED OXA1L WILD-TYPE 
         136.44          345.96 
  OXA1L MUTATED OXA1L WILD-TYPE 
          56.73           47.54 
[1] "33.7 - 136.4 (56.7)" "0.2 - 346.0 (47.5)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE"   "OXA1L MUTATED" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OXA1L MUTATED" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE"   "OXA1L MUTATED" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE"   "OXA1L MUTATED" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE"   "OXA1L MUTATED" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OXA1L MUTATED" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE"   "OXA1L MUTATED" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE"   "OXA1L MUTATED" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE"   "OXA1L MUTATED" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OXA1L MUTATED" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE"   "OXA1L MUTATED" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE"   "OXA1L MUTATED" "OXA1L WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OXA1L WILD-TYPE" "OXA1L WILD-TYPE" "OXA1L WILD-TYPE" 
[1] "hr=" "1.1"
D6V2, continuous
D6V3, binary
                 cls
clus               0  1
  OXA1L MUTATED    2  2
  OXA1L WILD-TYPE 55 87
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OXA1L MUTATED      2    2
  OXA1L WILD-TYPE   55   87
        clus
vv       OXA1L MUTATED OXA1L WILD-TYPE
  FEMALE             2              55
  MALE               2              87
                 vv
clus               M0  M1 M1A M1B M1C
  OXA1L MUTATED     4   0   0   0   0
  OXA1L WILD-TYPE 120   2   1   1   2
D6V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  OXA1L MUTATED    2  0   1   1   0   0   0  0  0
  OXA1L WILD-TYPE 79  2   6  11   3   9   5 10  2
D6V5, multiclass
D6V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OXA1L MUTATED         0        0        0        2         0         0
  OXA1L WILD-TYPE      17        9       11       16         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  OXA1L MUTATED           0         0          1          1          0        0
  OXA1L WILD-TYPE         7         5          5         15         16        4
D6V7, multiclass

Clustering(7) Variable = STK19 MUTATION ANALYSIS
D7V1, survival
                 sevent
clus2              0  1
  STK19 MUTATED    3  6
  STK19 WILD-TYPE 69 65
  STK19 MUTATED STK19 WILD-TYPE 
              9             134 
  STK19 MUTATED STK19 WILD-TYPE 
              6              65 
$`STK19 MUTATED`
TCGA-DA-A1HV TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A2GD TCGA-EE-A2GI 
       48.89        33.73        26.86         4.93       314.53        22.55 
TCGA-EE-A2MG TCGA-FS-A1ZA TCGA-GN-A266 
      103.17        27.68        10.09 

$`STK19 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A20B TCGA-EE-A20F 
       15.68        29.82         8.65        14.70       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H 
      168.26        63.32        47.84        13.97        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
        2.56        44.35        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE 
       24.43        39.25        58.75        47.54        43.23       135.91 
TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
      101.95        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.27        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS 
      167.87        47.54       248.61        43.23       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
       26.73        13.81        23.47       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  STK19 MUTATED STK19 WILD-TYPE 
           4.93            0.20 
  STK19 MUTATED STK19 WILD-TYPE 
         314.53          345.96 
  STK19 MUTATED STK19 WILD-TYPE 
         27.680          48.215 
[1] "4.9 - 314.5 (27.7)" "0.2 - 346.0 (48.2)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"STK19 WILD-TYPE"   "STK19 MUTATED" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "STK19 MUTATED" "STK19 WILD-TYPE"   "STK19 MUTATED"   "STK19 MUTATED" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"STK19 WILD-TYPE"   "STK19 MUTATED" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "STK19 MUTATED" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE"   "STK19 MUTATED" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE"   "STK19 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"STK19 WILD-TYPE" "STK19 WILD-TYPE"   "STK19 MUTATED" "STK19 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"STK19 WILD-TYPE"   "STK19 MUTATED" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "STK19 MUTATED" "STK19 WILD-TYPE"   "STK19 MUTATED"   "STK19 MUTATED" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"STK19 WILD-TYPE"   "STK19 MUTATED" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "STK19 MUTATED" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE"   "STK19 MUTATED" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE"   "STK19 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"STK19 WILD-TYPE" "STK19 WILD-TYPE"   "STK19 MUTATED" "STK19 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"STK19 WILD-TYPE"   "STK19 MUTATED" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "STK19 MUTATED" "STK19 WILD-TYPE"   "STK19 MUTATED"   "STK19 MUTATED" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"STK19 WILD-TYPE"   "STK19 MUTATED" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "STK19 MUTATED" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE"   "STK19 MUTATED" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE"   "STK19 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"STK19 WILD-TYPE" "STK19 WILD-TYPE"   "STK19 MUTATED" "STK19 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
[1] "hr=" "1.5"
D7V2, continuous
D7V3, binary
                 cls
clus               0  1
  STK19 MUTATED    5  4
  STK19 WILD-TYPE 52 85
[1] "tbl2"
                 cls
clus              [,1] [,2]
  STK19 MUTATED      5    4
  STK19 WILD-TYPE   52   85
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  FEMALE             5              52
  MALE               4              85
                 vv
clus               M0  M1 M1A M1B M1C
  STK19 MUTATED     8   0   0   0   0
  STK19 WILD-TYPE 116   2   1   1   2
D7V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  STK19 MUTATED    5  0   0   0   0   1   1  1  0
  STK19 WILD-TYPE 76  2   7  12   3   8   4  9  2
D7V5, multiclass
D7V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  STK19 MUTATED         2        1        0        1         0         1
  STK19 WILD-TYPE      15        8       11       17         7         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  STK19 MUTATED           0         0          0          2          1        0
  STK19 WILD-TYPE         7         5          6         14         15        4
D7V7, multiclass

Clustering(8) Variable = PTEN MUTATION ANALYSIS
D8V1, survival
                sevent
clus2             0  1
  PTEN MUTATED    6  5
  PTEN WILD-TYPE 66 66
  PTEN MUTATED PTEN WILD-TYPE 
            11            132 
  PTEN MUTATED PTEN WILD-TYPE 
             5             66 
$`PTEN MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-EE-A17Z TCGA-EE-A29P TCGA-EE-A2GN TCGA-EE-A2GS 
      121.22        58.03         8.65        56.42        90.94        55.59 
TCGA-EE-A2GU TCGA-EE-A3AH TCGA-ER-A19J TCGA-FS-A1ZD TCGA-FW-A3I3 
       67.13       138.77         6.41        53.52         0.20 

$`PTEN WILD-TYPE`
TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW 
       71.24         9.30        21.47       148.31        49.74         2.70 
TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
        6.38        48.89        36.03       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82        33.73        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       78.87       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29R 
       32.19         2.56        44.35        18.58        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       24.43        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2M5 
       75.48       101.95        13.87        14.30        19.56        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS 
      167.87        47.54       248.61        43.23       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19L 
       26.73        13.81        23.47        12.59        26.37       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       49.48        27.06        27.02        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        62.76        32.48        39.58 

  PTEN MUTATED PTEN WILD-TYPE 
          0.20           2.56 
  PTEN MUTATED PTEN WILD-TYPE 
        138.77         345.96 
  PTEN MUTATED PTEN WILD-TYPE 
         56.42          47.33 
[1] "0.2 - 138.8 (56.4)" "2.6 - 346.0 (47.3)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
  "PTEN MUTATED"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
  "PTEN MUTATED"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
  "PTEN MUTATED"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
[1] "hr=" "1"  
D8V2, continuous
D8V3, binary
                cls
clus              0  1
  PTEN MUTATED    6  5
  PTEN WILD-TYPE 51 84
[1] "tbl2"
                cls
clus             [,1] [,2]
  PTEN MUTATED      6    5
  PTEN WILD-TYPE   51   84
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  FEMALE            6             51
  MALE              5             84
                vv
clus              M0  M1 M1A M1B M1C
  PTEN MUTATED     9   2   0   0   0
  PTEN WILD-TYPE 115   0   1   1   2
D8V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  PTEN MUTATED   10  0   0   0   0   0   0  1  0
  PTEN WILD-TYPE 71  2   7  12   3   9   5  9  2
D8V5, multiclass
D8V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PTEN MUTATED         0        1        3        1         2         1
  PTEN WILD-TYPE      17        8        8       17         5         7
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  PTEN MUTATED           1         0          0          0          0        2
  PTEN WILD-TYPE         6         5          6         16         16        2
D8V7, multiclass

Clustering(9) Variable = RAC1 MUTATION ANALYSIS
D9V1, survival
                sevent
clus2             0  1
  RAC1 MUTATED    3  8
  RAC1 WILD-TYPE 69 63
  RAC1 MUTATED RAC1 WILD-TYPE 
            11            132 
  RAC1 MUTATED RAC1 WILD-TYPE 
             8             63 
$`RAC1 MUTATED`
TCGA-EE-A181 TCGA-EE-A29D TCGA-EE-A2GM TCGA-EE-A2M5 TCGA-EE-A3AB TCGA-ER-A1A1 
       33.73        13.97        75.48        21.67       122.73        79.99 
TCGA-FS-A1ZA TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZU TCGA-GN-A266 
       27.68        23.93        74.73        26.56        10.09 

$`RAC1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 
      215.44        15.68        29.82         8.65        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       54.71        55.00        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        19.56        67.13       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       43.23       103.56       136.44        41.59        53.26         4.24 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A3ET 
       12.59        26.37         6.41       131.08        44.05        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
        7.76        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       32.71        47.38       101.26        11.41       148.77        53.16 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        84.72        64.41        62.76        32.48        39.58 

  RAC1 MUTATED RAC1 WILD-TYPE 
         10.09           0.20 
  RAC1 MUTATED RAC1 WILD-TYPE 
        122.73         345.96 
  RAC1 MUTATED RAC1 WILD-TYPE 
        27.680         48.215 
[1] "10.1 - 122.7 (27.7)" "0.2 - 346.0 (48.2)" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE"   "RAC1 MUTATED" "RAC1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"RAC1 WILD-TYPE" "RAC1 WILD-TYPE" "RAC1 WILD-TYPE" 
[1] "hr=" "2.1"
D9V2, continuous
D9V3, binary
                cls
clus              0  1
  RAC1 MUTATED    4  7
  RAC1 WILD-TYPE 53 82
[1] "tbl2"
                cls
clus             [,1] [,2]
  RAC1 MUTATED      4    7
  RAC1 WILD-TYPE   53   82
        clus
vv       RAC1 MUTATED RAC1 WILD-TYPE
  FEMALE            4             53
  MALE              7             82
                vv
clus              M0  M1 M1A M1B M1C
  RAC1 MUTATED     9   0   0   0   0
  RAC1 WILD-TYPE 115   2   1   1   2
D9V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  RAC1 MUTATED    6  0   0   1   0   0   1  1  0
  RAC1 WILD-TYPE 75  2   7  11   3   9   4  9  2
D9V5, multiclass
D9V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  RAC1 MUTATED         1        0        0        3         0         0
  RAC1 WILD-TYPE      16        9       11       15         7         8
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  RAC1 MUTATED           2         0          0          1          2        0
  RAC1 WILD-TYPE         5         5          6         15         14        4
D9V7, multiclass

Clustering(10) Variable = ACSM2B MUTATION ANALYSIS
D10V1, survival
                  sevent
clus2               0  1
  ACSM2B MUTATED   12 15
  ACSM2B WILD-TYPE 60 56
  ACSM2B MUTATED ACSM2B WILD-TYPE 
              27              116 
  ACSM2B MUTATED ACSM2B WILD-TYPE 
              15               56 
$`ACSM2B MUTATED`
TCGA-D9-A1JW TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        2.70        14.70        26.86       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29V TCGA-EE-A2GC 
       13.97        39.62         2.56        44.35        25.87        43.23 
TCGA-EE-A2GI TCGA-EE-A2GM TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2MG TCGA-EE-A2MH 
       22.55        75.48        19.56        21.67       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MM TCGA-EE-A2MT TCGA-EE-A3AD TCGA-EE-A3AG 
      204.62        96.23       167.87        41.59         3.68        23.47 
TCGA-ER-A1A1 TCGA-FS-A1ZR TCGA-GN-A267 
       79.99        11.41        64.41 

$`ACSM2B WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A185 TCGA-EE-A20B 
       15.68        29.82         8.65        33.73         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A29H TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
       78.87        32.19        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
       55.89       345.96        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       39.25        58.75        47.54       314.53       135.91       182.01 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       89.33        54.71        55.00        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       14.30        55.59        67.13       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN 
       61.51        47.28       103.27       144.76       203.01        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56       136.44        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D 
      122.73        25.84        26.73        13.81       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A3ET TCGA-FS-A1YW 
       26.37         6.41       131.08        44.05        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZS 
       32.71        47.38        23.93       101.26        74.73       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        10.09        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  ACSM2B MUTATED ACSM2B WILD-TYPE 
            2.56             0.20 
  ACSM2B MUTATED ACSM2B WILD-TYPE 
          204.62           345.96 
  ACSM2B MUTATED ACSM2B WILD-TYPE 
          39.620           49.185 
[1] "2.6 - 204.6 (39.6)" "0.2 - 346.0 (49.2)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ACSM2B WILD-TYPE"   "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED"   "ACSM2B MUTATED" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
  "ACSM2B MUTATED"   "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
  "ACSM2B MUTATED"   "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ACSM2B WILD-TYPE"   "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED"   "ACSM2B MUTATED" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
  "ACSM2B MUTATED"   "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
  "ACSM2B MUTATED"   "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ACSM2B WILD-TYPE"   "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED"   "ACSM2B MUTATED" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
  "ACSM2B MUTATED"   "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
  "ACSM2B MUTATED"   "ACSM2B MUTATED"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
  "ACSM2B MUTATED" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE"   "ACSM2B MUTATED" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" "ACSM2B WILD-TYPE" 
[1] "hr=" "1.5"
D10V2, continuous
D10V3, binary
                  cls
clus                0  1
  ACSM2B MUTATED    4 24
  ACSM2B WILD-TYPE 53 65
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ACSM2B MUTATED      4   24
  ACSM2B WILD-TYPE   53   65
        clus
vv       ACSM2B MUTATED ACSM2B WILD-TYPE
  FEMALE              4               53
  MALE               24               65
                  vv
clus               M0 M1 M1A M1B M1C
  ACSM2B MUTATED   25  0   0   0   0
  ACSM2B WILD-TYPE 99  2   1   1   2
D10V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  ACSM2B MUTATED   16  0   2   4   1   0   0  2  0
  ACSM2B WILD-TYPE 65  2   5   8   2   9   5  8  2
D10V5, multiclass
D10V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  ACSM2B MUTATED         5        1        3        3         1         2
  ACSM2B WILD-TYPE      12        8        8       15         6         6
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  ACSM2B MUTATED           1         0          2          1          5
  ACSM2B WILD-TYPE         6         5          4         15         11
                  vv
clus               STAGE IV
  ACSM2B MUTATED          0
  ACSM2B WILD-TYPE        4
D10V7, multiclass

Clustering(11) Variable = CADM2 MUTATION ANALYSIS
D11V1, survival
                 sevent
clus2              0  1
  CADM2 MUTATED    9  7
  CADM2 WILD-TYPE 63 64
  CADM2 MUTATED CADM2 WILD-TYPE 
             16             127 
  CADM2 MUTATED CADM2 WILD-TYPE 
              7              64 
$`CADM2 MUTATED`
TCGA-D3-A3MV TCGA-D9-A149 TCGA-DA-A1HY TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29E 
       21.47        49.74       117.17       168.26        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A2A2 TCGA-EE-A2GB TCGA-EE-A2GM TCGA-EE-A2M5 TCGA-EE-A2MG 
       32.19        24.43        47.54        75.48        21.67       103.17 
TCGA-EE-A2MI TCGA-FS-A1ZA TCGA-FS-A1ZE TCGA-GN-A268 
      204.62        27.68        40.27        62.76 

$`CADM2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A1JW 
      121.22        58.03        71.24         9.30       148.31         2.70 
TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 
        6.38        48.89        36.03        20.38       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       68.09        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
        8.65        33.73        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       78.87        63.32        47.84         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC 
       17.92        46.82        78.94        39.25        58.75        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       19.56        67.13       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
       47.28       103.27        16.96        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS 
      167.87        47.54       248.61        43.23       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
       26.73        13.81        23.47       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       48.85        53.52        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
      120.46       117.93        84.72        10.09        64.41        32.48 
TCGA-GN-A26D 
       39.58 

  CADM2 MUTATED CADM2 WILD-TYPE 
          13.97            0.20 
  CADM2 MUTATED CADM2 WILD-TYPE 
         204.62          345.96 
  CADM2 MUTATED CADM2 WILD-TYPE 
         43.905          47.840 
[1] "14.0 - 204.6 (43.9)" "0.2 - 346.0 (47.8)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
  "CADM2 MUTATED" "CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CADM2 WILD-TYPE"   "CADM2 MUTATED"   "CADM2 MUTATED"   "CADM2 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
  "CADM2 MUTATED" "CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CADM2 WILD-TYPE"   "CADM2 MUTATED"   "CADM2 MUTATED"   "CADM2 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
  "CADM2 MUTATED" "CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CADM2 WILD-TYPE"   "CADM2 MUTATED"   "CADM2 MUTATED"   "CADM2 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE"   "CADM2 MUTATED" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
  "CADM2 MUTATED" "CADM2 WILD-TYPE" "CADM2 WILD-TYPE" 
[1] "hr=" "1.2"
D11V2, continuous
D11V3, binary
                 cls
clus               0  1
  CADM2 MUTATED    6 10
  CADM2 WILD-TYPE 51 79
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CADM2 MUTATED      6   10
  CADM2 WILD-TYPE   51   79
        clus
vv       CADM2 MUTATED CADM2 WILD-TYPE
  FEMALE             6              51
  MALE              10              79
                 vv
clus               M0  M1 M1A M1B M1C
  CADM2 MUTATED    16   0   0   0   0
  CADM2 WILD-TYPE 108   2   1   1   2
D11V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  CADM2 MUTATED    8  0   1   4   1   0   1  1  0
  CADM2 WILD-TYPE 73  2   6   8   2   9   4  9  2
D11V5, multiclass
D11V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CADM2 MUTATED         3        1        0        0         0         2
  CADM2 WILD-TYPE      14        8       11       18         7         6
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  CADM2 MUTATED           2         0          1          4          2        0
  CADM2 WILD-TYPE         5         5          5         12         14        4
D11V7, multiclass

Clustering(12) Variable = OR51S1 MUTATION ANALYSIS
D12V1, survival
                  sevent
clus2               0  1
  OR51S1 MUTATED    8  8
  OR51S1 WILD-TYPE 64 63
  OR51S1 MUTATED OR51S1 WILD-TYPE 
              16              127 
  OR51S1 MUTATED OR51S1 WILD-TYPE 
               8               63 
$`OR51S1 MUTATED`
TCGA-EE-A183 TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A2GC TCGA-EE-A2GI 
       26.86        32.19        44.35        18.58        43.23        22.55 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MS TCGA-EE-A2MT 
      101.95        13.87        96.23       144.76       136.44        41.59 
TCGA-FS-A1Z3 TCGA-FS-A1ZK TCGA-GN-A266 TCGA-GN-A268 
       20.91        23.93        10.09        62.76 

$`OR51S1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
       13.97        39.62         2.56        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       24.43        39.25        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       14.30        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       16.96       204.62       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
       43.23       103.56        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
      216.92        48.59       228.59       202.62        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        47.38       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26A 
       76.41       120.46       117.93        84.72        64.41        32.48 
TCGA-GN-A26D 
       39.58 

  OR51S1 MUTATED OR51S1 WILD-TYPE 
           10.09             0.20 
  OR51S1 MUTATED OR51S1 WILD-TYPE 
          144.76           345.96 
  OR51S1 MUTATED OR51S1 WILD-TYPE 
           36.89            48.85 
[1] "10.1 - 144.8 (36.9)" "0.2 - 346.0 (48.9)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" "OR51S1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" "OR51S1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" "OR51S1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" "OR51S1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" "OR51S1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" "OR51S1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" "OR51S1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" "OR51S1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED"   "OR51S1 MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE"   "OR51S1 MUTATED" "OR51S1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
  "OR51S1 MUTATED" "OR51S1 WILD-TYPE" "OR51S1 WILD-TYPE" 
[1] "hr=" "1.3"
D12V2, continuous
D12V3, binary
                  cls
clus                0  1
  OR51S1 MUTATED    6 10
  OR51S1 WILD-TYPE 51 79
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR51S1 MUTATED      6   10
  OR51S1 WILD-TYPE   51   79
        clus
vv       OR51S1 MUTATED OR51S1 WILD-TYPE
  FEMALE              6               51
  MALE               10               79
                  vv
clus                M0  M1 M1A M1B M1C
  OR51S1 MUTATED    14   0   0   0   0
  OR51S1 WILD-TYPE 110   2   1   1   2
D12V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  OR51S1 MUTATED   13  0   1   0   0   0   0  0  0
  OR51S1 WILD-TYPE 68  2   6  12   3   9   5 10  2
D12V5, multiclass
D12V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OR51S1 MUTATED         1        2        2        5         0         2
  OR51S1 WILD-TYPE      16        7        9       13         7         6
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  OR51S1 MUTATED           0         0          0          1          0
  OR51S1 WILD-TYPE         7         5          6         15         16
                  vv
clus               STAGE IV
  OR51S1 MUTATED          0
  OR51S1 WILD-TYPE        4
D12V7, multiclass

Clustering(13) Variable = LCE1B MUTATION ANALYSIS
D13V1, survival
                 sevent
clus2              0  1
  LCE1B MUTATED    3  7
  LCE1B WILD-TYPE 69 64
  LCE1B MUTATED LCE1B WILD-TYPE 
             10             133 
  LCE1B MUTATED LCE1B WILD-TYPE 
              7              64 
$`LCE1B MUTATED`
TCGA-EE-A185 TCGA-EE-A29M TCGA-EE-A29T TCGA-EE-A2GP TCGA-EE-A2GU TCGA-EE-A2MD 
        4.93        44.35       345.96        13.87        67.13        47.28 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-FS-A1ZZ TCGA-GN-A266 
       16.96       204.62        27.02        10.09 

$`LCE1B WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
       26.86       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P 
       13.97        39.62        32.19         2.56        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       37.35        14.47        55.89        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       78.94        24.43        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        75.48        90.94       101.95        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       19.56        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.27       103.17        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 
       53.16        26.56        49.48        27.06         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      120.46       117.93        84.72        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  LCE1B MUTATED LCE1B WILD-TYPE 
           4.93            0.20 
  LCE1B MUTATED LCE1B WILD-TYPE 
         345.96          314.53 
  LCE1B MUTATED LCE1B WILD-TYPE 
         35.685          48.590 
[1] "4.9 - 346.0 (35.7)" "0.2 - 314.5 (48.6)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"LCE1B WILD-TYPE"   "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"LCE1B WILD-TYPE"   "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
  "LCE1B MUTATED"   "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" "LCE1B WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"LCE1B WILD-TYPE"   "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"LCE1B WILD-TYPE"   "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
  "LCE1B MUTATED"   "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" "LCE1B WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"LCE1B WILD-TYPE"   "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"LCE1B WILD-TYPE"   "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
  "LCE1B MUTATED"   "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "LCE1B MUTATED" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE"   "LCE1B MUTATED" "LCE1B WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"LCE1B WILD-TYPE" "LCE1B WILD-TYPE" "LCE1B WILD-TYPE" 
[1] "hr=" "1.4"
D13V2, continuous
D13V3, binary
                 cls
clus               0  1
  LCE1B MUTATED    5  5
  LCE1B WILD-TYPE 52 84
[1] "tbl2"
                 cls
clus              [,1] [,2]
  LCE1B MUTATED      5    5
  LCE1B WILD-TYPE   52   84
        clus
vv       LCE1B MUTATED LCE1B WILD-TYPE
  FEMALE             5              52
  MALE               5              84
                 vv
clus               M0  M1 M1A M1B M1C
  LCE1B MUTATED     9   0   0   0   0
  LCE1B WILD-TYPE 115   2   1   1   2
D13V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  LCE1B MUTATED    6  0   1   0   0   0   0  1  1
  LCE1B WILD-TYPE 75  2   6  12   3   9   5  9  1
D13V5, multiclass
D13V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  LCE1B MUTATED         0        1        1        2         0         2
  LCE1B WILD-TYPE      17        8       10       16         7         6
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  LCE1B MUTATED           0         0          0          1          1        0
  LCE1B WILD-TYPE         7         5          6         15         15        4
D13V7, multiclass

Clustering(14) Variable = IDH1 MUTATION ANALYSIS
D14V1, survival
                sevent
clus2             0  1
  IDH1 MUTATED    4  3
  IDH1 WILD-TYPE 68 68
  IDH1 MUTATED IDH1 WILD-TYPE 
             7            136 
  IDH1 MUTATED IDH1 WILD-TYPE 
             3             68 
$`IDH1 MUTATED`
TCGA-D9-A149 TCGA-EE-A29A TCGA-EE-A29P TCGA-EE-A2GT TCGA-EE-A2GU TCGA-FS-A1ZP 
       49.74        63.32        56.42        19.56        67.13        74.73 
TCGA-GN-A268 
       62.76 

$`IDH1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D 
        4.93       109.64        78.87       168.26        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q 
       39.62        32.19         2.56        44.35        18.58        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       78.94        24.43        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       55.00        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       55.59        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        32.48        39.58 

  IDH1 MUTATED IDH1 WILD-TYPE 
         19.56           0.20 
  IDH1 MUTATED IDH1 WILD-TYPE 
         74.73         345.96 
  IDH1 MUTATED IDH1 WILD-TYPE 
         62.76          47.33 
[1] "19.6 - 74.7 (62.8)" "0.2 - 346.0 (47.3)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED"   "IDH1 MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED"   "IDH1 MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE"   "IDH1 MUTATED"   "IDH1 MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"IDH1 WILD-TYPE"   "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "IDH1 MUTATED" "IDH1 WILD-TYPE" "IDH1 WILD-TYPE" 
[1] "hr=" "1.2"
D14V2, continuous
D14V3, binary
                cls
clus              0  1
  IDH1 MUTATED    4  3
  IDH1 WILD-TYPE 53 86
[1] "tbl2"
                cls
clus             [,1] [,2]
  IDH1 MUTATED      4    3
  IDH1 WILD-TYPE   53   86
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  FEMALE            4             53
  MALE              3             86
                vv
clus              M0  M1 M1A M1B M1C
  IDH1 MUTATED     7   0   0   0   0
  IDH1 WILD-TYPE 117   2   1   1   2
D14V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  IDH1 MUTATED    5  0   1   1   0   0   0  0  0
  IDH1 WILD-TYPE 76  2   6  11   3   9   5 10  2
D14V5, multiclass
D14V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  IDH1 MUTATED         0        1        0        1         1         1
  IDH1 WILD-TYPE      17        8       11       17         6         7
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  IDH1 MUTATED           1         0          1          0          0        0
  IDH1 WILD-TYPE         6         5          5         16         16        4
D14V7, multiclass

Clustering(15) Variable = TAF1A MUTATION ANALYSIS
D15V1, survival
                 sevent
clus2              0  1
  TAF1A MUTATED    2  6
  TAF1A WILD-TYPE 70 65
  TAF1A MUTATED TAF1A WILD-TYPE 
              8             135 
  TAF1A MUTATED TAF1A WILD-TYPE 
              6              65 
$`TAF1A MUTATED`
TCGA-D9-A148 TCGA-EE-A2MD TCGA-EE-A2MT TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZG 
      148.31        47.28        41.59       202.62        28.08         9.70 
TCGA-FS-A1ZJ TCGA-GN-A26A 
       47.38        32.48 

$`TAF1A WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 
      121.22        58.03        71.24         9.30        21.47        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
      129.24        28.80        19.76        61.51       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU 
       47.54       248.61        43.23       103.56       136.44        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       20.91         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       15.45        32.71        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
        0.20        76.41       120.46       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26D 
       64.41        62.76        39.58 

  TAF1A MUTATED TAF1A WILD-TYPE 
            9.7             0.2 
  TAF1A MUTATED TAF1A WILD-TYPE 
         202.62          345.96 
  TAF1A MUTATED TAF1A WILD-TYPE 
         44.435          48.590 
[1] "9.7 - 202.6 (44.4)" "0.2 - 346.0 (48.6)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE"   "TAF1A MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE"   "TAF1A MUTATED" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
  "TAF1A MUTATED" "TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE"   "TAF1A MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE"   "TAF1A MUTATED" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
  "TAF1A MUTATED" "TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE"   "TAF1A MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE"   "TAF1A MUTATED" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
  "TAF1A MUTATED" "TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" "TAF1A WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"TAF1A WILD-TYPE"   "TAF1A MUTATED" "TAF1A WILD-TYPE" 
[1] "hr=" "1.6"
D15V2, continuous
D15V3, binary
                 cls
clus               0  1
  TAF1A MUTATED    4  4
  TAF1A WILD-TYPE 53 85
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TAF1A MUTATED      4    4
  TAF1A WILD-TYPE   53   85
        clus
vv       TAF1A MUTATED TAF1A WILD-TYPE
  FEMALE             4              53
  MALE               4              85
                 vv
clus               M0  M1 M1A M1B M1C
  TAF1A MUTATED     7   0   0   1   0
  TAF1A WILD-TYPE 117   2   1   0   2
D15V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  TAF1A MUTATED    5  0   1   0   0   1   0  1  0
  TAF1A WILD-TYPE 76  2   6  12   3   8   5  9  2
D15V5, multiclass
D15V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TAF1A MUTATED         2        1        1        1         0         0
  TAF1A WILD-TYPE      15        8       10       17         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  TAF1A MUTATED           0         0          1          0          1        0
  TAF1A WILD-TYPE         7         5          5         16         15        4
D15V7, multiclass

Clustering(16) Variable = NAP1L2 MUTATION ANALYSIS
D16V1, survival
                  sevent
clus2               0  1
  NAP1L2 MUTATED    6  7
  NAP1L2 WILD-TYPE 66 64
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
              13              130 
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               7               64 
$`NAP1L2 MUTATED`
TCGA-D3-A3C6 TCGA-DA-A1HV TCGA-EE-A182 TCGA-EE-A20F TCGA-EE-A29D TCGA-EE-A29M 
       58.03        48.89        14.70        78.87        13.97        44.35 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2MC TCGA-EE-A2MJ TCGA-EE-A2MT TCGA-FS-A1Z3 
      101.95        14.30        61.51        96.23        41.59        20.91 
TCGA-FS-A1ZZ 
       27.02 

$`NAP1L2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
      121.22        71.24         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
        2.70         6.38        36.03       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        33.73        26.86         4.93       109.64 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
      168.26        63.32        47.84        39.62        32.19         2.56 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       28.80        19.76        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
      204.62       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
       43.23       103.56       136.44        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 
       80.32       216.92        48.59       228.59       202.62        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
        0.20        76.41       120.46       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
           13.97             0.20 
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
          101.95           345.96 
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
           44.35            47.69 
[1] "14.0 - 102.0 (44.4)" "0.2 - 346.0 (47.7)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE"   "NAP1L2 MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "NAP1L2 MUTATED" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
[1] "hr=" "1.4"
D16V2, continuous
D16V3, binary
                  cls
clus                0  1
  NAP1L2 MUTATED    7  7
  NAP1L2 WILD-TYPE 50 82
[1] "tbl2"
                  cls
clus               [,1] [,2]
  NAP1L2 MUTATED      7    7
  NAP1L2 WILD-TYPE   50   82
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  FEMALE              7               50
  MALE                7               82
                  vv
clus                M0  M1 M1A M1B M1C
  NAP1L2 MUTATED    13   0   0   0   0
  NAP1L2 WILD-TYPE 111   2   1   1   2
D16V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  NAP1L2 MUTATED    9  0   0   3   0   1   0  0  0
  NAP1L2 WILD-TYPE 72  2   7   9   3   8   5 10  2
D16V5, multiclass
D16V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  NAP1L2 MUTATED         1        0        3        4         0         1
  NAP1L2 WILD-TYPE      16        9        8       14         7         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  NAP1L2 MUTATED           0         0          0          2          2
  NAP1L2 WILD-TYPE         7         5          6         14         14
                  vv
clus               STAGE IV
  NAP1L2 MUTATED          0
  NAP1L2 WILD-TYPE        4
D16V7, multiclass

Clustering(17) Variable = MUC7 MUTATION ANALYSIS
D17V1, survival
                sevent
clus2             0  1
  MUC7 MUTATED    7  4
  MUC7 WILD-TYPE 65 67
  MUC7 MUTATED MUC7 WILD-TYPE 
            11            132 
  MUC7 MUTATED MUC7 WILD-TYPE 
             4             67 
$`MUC7 MUTATED`
TCGA-DA-A1IC TCGA-EE-A181 TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A2GC TCGA-EE-A2GJ 
       68.09        33.73        13.97        39.62        43.23        89.33 
TCGA-EE-A2GO TCGA-EE-A2MR TCGA-EE-A2MS TCGA-ER-A3ET TCGA-FS-A1ZK 
      101.95       103.56       136.44        80.32        23.93 

$`MUC7 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       53.92        65.92        23.44        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H 
      109.64        78.87       168.26        63.32        47.84        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
        2.56        44.35        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       24.43        39.25        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        22.55        54.71        55.00        75.48        90.94 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A2MU 
      167.87        47.54       248.61        43.23        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       44.05        79.99       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM 
       40.27        15.45         9.70        32.71        47.38       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       27.06        27.02         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        62.76        32.48        39.58 

  MUC7 MUTATED MUC7 WILD-TYPE 
         13.97           0.20 
  MUC7 MUTATED MUC7 WILD-TYPE 
        136.44         345.96 
  MUC7 MUTATED MUC7 WILD-TYPE 
         68.09          47.54 
[1] "14.0 - 136.4 (68.1)" "0.2 - 346.0 (47.5)" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"MUC7 WILD-TYPE"   "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"MUC7 WILD-TYPE"   "MUC7 MUTATED"   "MUC7 MUTATED" "MUC7 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"MUC7 WILD-TYPE"   "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE"   "MUC7 MUTATED" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"MUC7 WILD-TYPE"   "MUC7 MUTATED"   "MUC7 MUTATED" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE"   "MUC7 MUTATED" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE"   "MUC7 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"MUC7 WILD-TYPE"   "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"MUC7 WILD-TYPE"   "MUC7 MUTATED"   "MUC7 MUTATED" "MUC7 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"MUC7 WILD-TYPE"   "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE"   "MUC7 MUTATED" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"MUC7 WILD-TYPE"   "MUC7 MUTATED"   "MUC7 MUTATED" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE"   "MUC7 MUTATED" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE"   "MUC7 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"MUC7 WILD-TYPE"   "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"MUC7 WILD-TYPE"   "MUC7 MUTATED"   "MUC7 MUTATED" "MUC7 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"MUC7 WILD-TYPE"   "MUC7 MUTATED" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE"   "MUC7 MUTATED" "MUC7 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"MUC7 WILD-TYPE"   "MUC7 MUTATED"   "MUC7 MUTATED" "MUC7 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE"   "MUC7 MUTATED" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE"   "MUC7 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"MUC7 WILD-TYPE" "MUC7 WILD-TYPE" "MUC7 WILD-TYPE" 
[1] "hr=" "1.5"
D17V2, continuous
D17V3, binary
                cls
clus              0  1
  MUC7 MUTATED    3  8
  MUC7 WILD-TYPE 54 81
[1] "tbl2"
                cls
clus             [,1] [,2]
  MUC7 MUTATED      3    8
  MUC7 WILD-TYPE   54   81
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  FEMALE            3             54
  MALE              8             81
                vv
clus              M0  M1 M1A M1B M1C
  MUC7 MUTATED    11   0   0   0   0
  MUC7 WILD-TYPE 113   2   1   1   2
D17V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  MUC7 MUTATED    7  0   1   2   0   0   1  0  0
  MUC7 WILD-TYPE 74  2   6  10   3   9   4 10  2
D17V5, multiclass
D17V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  MUC7 MUTATED         1        1        0        4         0         1
  MUC7 WILD-TYPE      16        8       11       14         7         7
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  MUC7 MUTATED           0         0          1          2          1        0
  MUC7 WILD-TYPE         7         5          5         14         15        4
D17V7, multiclass

Clustering(18) Variable = PPP6C MUTATION ANALYSIS
D18V1, survival
                 sevent
clus2              0  1
  PPP6C MUTATED   10  3
  PPP6C WILD-TYPE 62 68
  PPP6C MUTATED PPP6C WILD-TYPE 
             13             130 
  PPP6C MUTATED PPP6C WILD-TYPE 
              3              68 
$`PPP6C MUTATED`
TCGA-D3-A3MV TCGA-DA-A1I1 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A29L TCGA-EE-A29R 
       21.47       194.83       215.44        15.68         2.56        14.47 
TCGA-EE-A2GD TCGA-EE-A2GM TCGA-EE-A2M6 TCGA-EE-A2ML TCGA-FS-A1ZH TCGA-FS-A1ZW 
      314.53        75.48       129.24       203.01        32.71        49.48 
TCGA-GN-A267 
       64.41 

$`PPP6C WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A17Z 
       23.44        68.09        28.60        10.49        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
       33.73        14.70        26.86         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H 
      168.26        63.32        47.84        13.97        39.62        32.19 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T 
       44.35        18.58        56.42        37.35        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       58.75        47.54        43.23       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       89.33        54.71        55.00        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13        21.67        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
      204.62        96.23       144.76       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       43.23       103.56       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       40.27        15.45         9.70        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY 
       74.73        11.41       148.77        53.16        26.56        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        62.76        32.48        39.58 

  PPP6C MUTATED PPP6C WILD-TYPE 
           2.56            0.20 
  PPP6C MUTATED PPP6C WILD-TYPE 
         314.53          345.96 
  PPP6C MUTATED PPP6C WILD-TYPE 
          64.41           47.46 
[1] "2.6 - 314.5 (64.4)" "0.2 - 346.0 (47.5)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
  "PPP6C MUTATED"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE"   "PPP6C MUTATED" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
  "PPP6C MUTATED"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE"   "PPP6C MUTATED" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
  "PPP6C MUTATED"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE"   "PPP6C MUTATED" "PPP6C WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE"   "PPP6C MUTATED" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PPP6C WILD-TYPE" "PPP6C WILD-TYPE" "PPP6C WILD-TYPE" 
[1] "hr=" "3.3"
D18V2, continuous
D18V3, binary
                 cls
clus               0  1
  PPP6C MUTATED    5  9
  PPP6C WILD-TYPE 52 80
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PPP6C MUTATED      5    9
  PPP6C WILD-TYPE   52   80
        clus
vv       PPP6C MUTATED PPP6C WILD-TYPE
  FEMALE             5              52
  MALE               9              80
                 vv
clus               M0  M1 M1A M1B M1C
  PPP6C MUTATED    12   0   0   0   1
  PPP6C WILD-TYPE 112   2   1   1   1
D18V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  PPP6C MUTATED    4  0   2   1   1   1   1  3  0
  PPP6C WILD-TYPE 77  2   5  11   2   8   4  7  2
D18V5, multiclass
D18V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PPP6C MUTATED         1        0        0        1         0         1
  PPP6C WILD-TYPE      16        9       11       17         7         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  PPP6C MUTATED           1         0          1          3          4        1
  PPP6C WILD-TYPE         6         5          5         13         12        3
D18V7, multiclass

Clustering(19) Variable = FRG2B MUTATION ANALYSIS
D19V1, survival
                 sevent
clus2              0  1
  FRG2B MUTATED    5  5
  FRG2B WILD-TYPE 67 66
  FRG2B MUTATED FRG2B WILD-TYPE 
             10             133 
  FRG2B MUTATED FRG2B WILD-TYPE 
              5              66 
$`FRG2B MUTATED`
TCGA-DA-A1HV TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A2GI 
       48.89        33.73        14.70       168.26        13.97        22.55 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2MC TCGA-EE-A3AE 
      101.95        14.30        61.51        26.73 

$`FRG2B WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       15.68        29.82         8.65        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
       78.87        63.32        47.84        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       39.25        58.75        47.54        43.23       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       28.80        19.76        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24       122.73        25.84         3.68        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  FRG2B MUTATED FRG2B WILD-TYPE 
          13.97            0.20 
  FRG2B MUTATED FRG2B WILD-TYPE 
         168.26          345.96 
  FRG2B MUTATED FRG2B WILD-TYPE 
          30.23           47.84 
[1] "14.0 - 168.3 (30.2)" "0.2 - 346.0 (47.8)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "FRG2B MUTATED"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
  "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "FRG2B MUTATED"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
  "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "FRG2B MUTATED"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
  "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"FRG2B WILD-TYPE"   "FRG2B MUTATED" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"FRG2B WILD-TYPE" "FRG2B WILD-TYPE" "FRG2B WILD-TYPE" 
[1] "hr=" "1.3"
D19V2, continuous
D19V3, binary
                 cls
clus               0  1
  FRG2B MUTATED    5  5
  FRG2B WILD-TYPE 52 84
[1] "tbl2"
                 cls
clus              [,1] [,2]
  FRG2B MUTATED      5    5
  FRG2B WILD-TYPE   52   84
        clus
vv       FRG2B MUTATED FRG2B WILD-TYPE
  FEMALE             5              52
  MALE               5              84
                 vv
clus               M0  M1 M1A M1B M1C
  FRG2B MUTATED    10   0   0   0   0
  FRG2B WILD-TYPE 114   2   1   1   2
D19V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  FRG2B MUTATED    7  0   0   2   0   1   0  0  0
  FRG2B WILD-TYPE 74  2   7  10   3   8   5 10  2
D19V5, multiclass
D19V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  FRG2B MUTATED         2        2        0        3         0         0
  FRG2B WILD-TYPE      15        7       11       15         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  FRG2B MUTATED           0         0          0          1          2        0
  FRG2B WILD-TYPE         7         5          6         15         14        4
D19V7, multiclass

Clustering(20) Variable = USP29 MUTATION ANALYSIS
D20V1, survival
                 sevent
clus2              0  1
  USP29 MUTATED   12 13
  USP29 WILD-TYPE 60 58
  USP29 MUTATED USP29 WILD-TYPE 
             25             118 
  USP29 MUTATED USP29 WILD-TYPE 
             13              58 
$`USP29 MUTATED`
TCGA-D9-A1JW TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A29D 
        2.70        15.68        29.82        33.73        14.70        13.97 
TCGA-EE-A29N TCGA-EE-A2A0 TCGA-EE-A2GC TCGA-EE-A2GI TCGA-EE-A2GO TCGA-EE-A2GU 
       18.58        46.82        43.23        22.55       101.95        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2MD TCGA-EE-A2MH TCGA-EE-A2MR TCGA-EE-A2MS 
       21.67       129.24        47.28        16.96       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A3AC TCGA-EE-A3AG TCGA-FS-A1Z3 TCGA-FS-A1ZA TCGA-FS-A1ZK 
       41.59        25.84        23.47        20.91        27.68        23.93 
TCGA-GN-A266 
       10.09 

$`USP29 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H 
        8.65        26.86         4.93       109.64        78.87       168.26 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       63.32        47.84        39.62        32.19         2.56        44.35 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       17.92        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      314.53       135.91       182.01        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       75.48        90.94        13.87        14.30        55.59        19.56 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MI 
       28.80        19.76        61.51       103.27       103.17       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE 
       43.23        53.26         4.24       122.73         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       13.81       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
      202.62        28.08         7.76        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        47.38       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  USP29 MUTATED USP29 WILD-TYPE 
            2.7             0.2 
  USP29 MUTATED USP29 WILD-TYPE 
         136.44          345.96 
  USP29 MUTATED USP29 WILD-TYPE 
          25.84           53.21 
[1] "2.7 - 136.4 (25.8)" "0.2 - 346.0 (53.2)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"USP29 WILD-TYPE"   "USP29 MUTATED"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "USP29 MUTATED"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "USP29 MUTATED"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"USP29 WILD-TYPE"   "USP29 MUTATED"   "USP29 MUTATED"   "USP29 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"USP29 WILD-TYPE"   "USP29 MUTATED"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "USP29 MUTATED"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "USP29 MUTATED"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"USP29 WILD-TYPE"   "USP29 MUTATED"   "USP29 MUTATED"   "USP29 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"USP29 WILD-TYPE"   "USP29 MUTATED"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "USP29 MUTATED"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "USP29 MUTATED"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"USP29 WILD-TYPE"   "USP29 MUTATED"   "USP29 MUTATED"   "USP29 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "USP29 MUTATED" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"USP29 WILD-TYPE" "USP29 WILD-TYPE"   "USP29 MUTATED" "USP29 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"USP29 WILD-TYPE" "USP29 WILD-TYPE" "USP29 WILD-TYPE" 
[1] "hr=" "1.8"
D20V2, continuous
D20V3, binary
                 cls
clus               0  1
  USP29 MUTATED    7 18
  USP29 WILD-TYPE 50 71
[1] "tbl2"
                 cls
clus              [,1] [,2]
  USP29 MUTATED      7   18
  USP29 WILD-TYPE   50   71
        clus
vv       USP29 MUTATED USP29 WILD-TYPE
  FEMALE             7              50
  MALE              18              71
                 vv
clus               M0  M1 M1A M1B M1C
  USP29 MUTATED    21   0   0   0   0
  USP29 WILD-TYPE 103   2   1   1   2
D20V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  USP29 MUTATED   16  0   0   2   1   1   1  0  0
  USP29 WILD-TYPE 65  2   7  10   2   8   4 10  2
D20V5, multiclass
D20V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  USP29 MUTATED         3        3        1        6         1         1
  USP29 WILD-TYPE      14        6       10       12         6         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  USP29 MUTATED           0         0          0          2          2        0
  USP29 WILD-TYPE         7         5          6         14         14        4
D20V7, multiclass

Clustering(21) Variable = PRB4 MUTATION ANALYSIS
D21V1, survival
                sevent
clus2             0  1
  PRB4 MUTATED   11  5
  PRB4 WILD-TYPE 61 66
  PRB4 MUTATED PRB4 WILD-TYPE 
            16            127 
  PRB4 MUTATED PRB4 WILD-TYPE 
             5             66 
$`PRB4 MUTATED`
TCGA-DA-A1I5 TCGA-DA-A3F8 TCGA-EE-A181 TCGA-EE-A29D TCGA-EE-A29P TCGA-EE-A2A1 
      107.34        15.68        33.73        13.97        56.42        78.94 
TCGA-EE-A2GJ TCGA-EE-A2GO TCGA-EE-A2M6 TCGA-EE-A2MI TCGA-EE-A2MN TCGA-EE-A2MR 
       89.33       101.95       129.24       204.62        47.54       103.56 
TCGA-EE-A2MS TCGA-ER-A19F TCGA-ER-A19N TCGA-GN-A265 
      136.44        26.37        44.05        84.72 

$`PRB4 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       194.83       176.55        35.93        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H 
       78.87       168.26        63.32        47.84        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
        2.56        44.35        18.58        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2A5 
      345.96        25.87        17.92        46.82        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP 
       22.55        54.71        55.00        75.48        90.94        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13        21.67        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A2MQ 
       96.23       144.76       203.01       167.87       248.61        43.23 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J 
       26.73        13.81        23.47       138.77        12.59         6.41 
TCGA-ER-A19L TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
      131.08        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      120.46       117.93        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  PRB4 MUTATED PRB4 WILD-TYPE 
         13.97           0.20 
  PRB4 MUTATED PRB4 WILD-TYPE 
        204.62         345.96 
  PRB4 MUTATED PRB4 WILD-TYPE 
         81.83          47.28 
[1] "14.0 - 204.6 (81.8)" "0.2 - 346.0 (47.3)" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRB4 WILD-TYPE"   "PRB4 MUTATED"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRB4 WILD-TYPE"   "PRB4 MUTATED"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRB4 WILD-TYPE"   "PRB4 MUTATED"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRB4 WILD-TYPE"   "PRB4 MUTATED" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRB4 WILD-TYPE" "PRB4 WILD-TYPE" "PRB4 WILD-TYPE" 
[1] "hr=" "2"  
D21V2, continuous
D21V3, binary
                cls
clus              0  1
  PRB4 MUTATED    4 12
  PRB4 WILD-TYPE 53 77
[1] "tbl2"
                cls
clus             [,1] [,2]
  PRB4 MUTATED      4   12
  PRB4 WILD-TYPE   53   77
        clus
vv       PRB4 MUTATED PRB4 WILD-TYPE
  FEMALE            4             53
  MALE             12             77
                vv
clus              M0  M1 M1A M1B M1C
  PRB4 MUTATED    13   0   0   0   1
  PRB4 WILD-TYPE 111   2   1   1   1
D21V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  PRB4 MUTATED   12  0   0   1   0   1   0  0  0
  PRB4 WILD-TYPE 69  2   7  11   3   8   5 10  2
D21V5, multiclass
D21V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PRB4 MUTATED         3        1        1        3         0         1
  PRB4 WILD-TYPE      14        8       10       15         7         7
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  PRB4 MUTATED           1         0          0          1          1        1
  PRB4 WILD-TYPE         6         5          6         15         15        3
D21V7, multiclass

Clustering(22) Variable = HIST1H2AA MUTATION ANALYSIS
D22V1, survival
                     sevent
clus2                  0  1
  HIST1H2AA MUTATED    3  4
  HIST1H2AA WILD-TYPE 69 67
  HIST1H2AA MUTATED HIST1H2AA WILD-TYPE 
                  7                 136 
  HIST1H2AA MUTATED HIST1H2AA WILD-TYPE 
                  4                  67 
$`HIST1H2AA MUTATED`
TCGA-EE-A29D TCGA-EE-A29M TCGA-EE-A2GU TCGA-EE-A2MC TCGA-EE-A2MK TCGA-FS-A1YW 
       13.97        44.35        67.13        61.51       144.76       216.92 
TCGA-FS-A1ZK 
       23.93 

$`HIST1H2AA WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P 
       47.84        39.62        32.19         2.56        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       14.30        55.59        19.56        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       19.76        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
       96.23       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
       80.32        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
        9.70        32.71        47.38       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
        0.20        76.41       120.46       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  HIST1H2AA MUTATED HIST1H2AA WILD-TYPE 
              13.97                0.20 
  HIST1H2AA MUTATED HIST1H2AA WILD-TYPE 
             216.92              345.96 
  HIST1H2AA MUTATED HIST1H2AA WILD-TYPE 
              61.51               47.54 
[1] "14.0 - 216.9 (61.5)" "0.2 - 346.0 (47.5)" 
         TCGA-D3-A1Q7          TCGA-D3-A3C6          TCGA-D3-A3CC 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-D3-A3MO          TCGA-D3-A3MV          TCGA-D9-A148 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-D9-A149          TCGA-D9-A1JW          TCGA-D9-A1JX 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1HV          TCGA-DA-A1HW          TCGA-DA-A1HY 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1I0          TCGA-DA-A1I1          TCGA-DA-A1I2 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1I4          TCGA-DA-A1I5          TCGA-DA-A1I7 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1I8          TCGA-DA-A1IA          TCGA-DA-A1IB 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1IC          TCGA-DA-A3F2          TCGA-DA-A3F3 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A3F5          TCGA-DA-A3F8          TCGA-EE-A17X 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A17Z          TCGA-EE-A181          TCGA-EE-A182 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A183          TCGA-EE-A185          TCGA-EE-A20B 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A20F          TCGA-EE-A20H          TCGA-EE-A29A 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29C          TCGA-EE-A29D          TCGA-EE-A29E 
"HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29H          TCGA-EE-A29L          TCGA-EE-A29M 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" 
         TCGA-EE-A29N          TCGA-EE-A29P          TCGA-EE-A29Q 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29R          TCGA-EE-A29S          TCGA-EE-A29T 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29V          TCGA-EE-A29X          TCGA-EE-A2A0 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2A1          TCGA-EE-A2A2          TCGA-EE-A2A5 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2A6          TCGA-EE-A2GB          TCGA-EE-A2GC 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GD          TCGA-EE-A2GE          TCGA-EE-A2GH 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GI          TCGA-EE-A2GJ          TCGA-EE-A2GK 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GL          TCGA-EE-A2GM          TCGA-EE-A2GN 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GO          TCGA-EE-A2GP          TCGA-EE-A2GR 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GS          TCGA-EE-A2GT          TCGA-EE-A2GU 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" 
         TCGA-EE-A2M5          TCGA-EE-A2M6          TCGA-EE-A2M7 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2M8          TCGA-EE-A2MC          TCGA-EE-A2MD 
"HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2ME          TCGA-EE-A2MG          TCGA-EE-A2MH 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2MI          TCGA-EE-A2MJ          TCGA-EE-A2MK 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" 
         TCGA-EE-A2ML          TCGA-EE-A2MM          TCGA-EE-A2MN 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2MP          TCGA-EE-A2MQ          TCGA-EE-A2MR 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2MS          TCGA-EE-A2MT          TCGA-EE-A2MU 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A3AA          TCGA-EE-A3AB          TCGA-EE-A3AC 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A3AD          TCGA-EE-A3AE          TCGA-EE-A3AF 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A3AG          TCGA-EE-A3AH          TCGA-ER-A19D 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-ER-A19F          TCGA-ER-A19J          TCGA-ER-A19L 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-ER-A19N          TCGA-ER-A1A1          TCGA-ER-A3ET 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1YW          TCGA-FS-A1YX          TCGA-FS-A1YY 
  "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1Z0          TCGA-FS-A1Z3          TCGA-FS-A1Z4 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1Z7          TCGA-FS-A1ZA          TCGA-FS-A1ZB 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZD          TCGA-FS-A1ZE          TCGA-FS-A1ZF 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZG          TCGA-FS-A1ZH          TCGA-FS-A1ZJ 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZK          TCGA-FS-A1ZM          TCGA-FS-A1ZP 
  "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZR          TCGA-FS-A1ZS          TCGA-FS-A1ZT 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZU          TCGA-FS-A1ZW          TCGA-FS-A1ZY 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZZ          TCGA-FW-A3I3          TCGA-GN-A261 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-GN-A262          TCGA-GN-A264          TCGA-GN-A265 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-GN-A266          TCGA-GN-A267          TCGA-GN-A268 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-GN-A26A          TCGA-GN-A26D 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-D3-A1Q7          TCGA-D3-A3C6          TCGA-D3-A3CC 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-D3-A3MO          TCGA-D3-A3MV          TCGA-D9-A148 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-D9-A149          TCGA-D9-A1JW          TCGA-D9-A1JX 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1HV          TCGA-DA-A1HW          TCGA-DA-A1HY 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1I0          TCGA-DA-A1I1          TCGA-DA-A1I2 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1I4          TCGA-DA-A1I5          TCGA-DA-A1I7 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1I8          TCGA-DA-A1IA          TCGA-DA-A1IB 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1IC          TCGA-DA-A3F2          TCGA-DA-A3F3 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A3F5          TCGA-DA-A3F8          TCGA-EE-A17X 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A17Z          TCGA-EE-A181          TCGA-EE-A182 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A183          TCGA-EE-A185          TCGA-EE-A20B 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A20F          TCGA-EE-A20H          TCGA-EE-A29A 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29C          TCGA-EE-A29D          TCGA-EE-A29E 
"HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29H          TCGA-EE-A29L          TCGA-EE-A29M 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" 
         TCGA-EE-A29N          TCGA-EE-A29P          TCGA-EE-A29Q 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29R          TCGA-EE-A29S          TCGA-EE-A29T 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29V          TCGA-EE-A29X          TCGA-EE-A2A0 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2A1          TCGA-EE-A2A2          TCGA-EE-A2A5 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2A6          TCGA-EE-A2GB          TCGA-EE-A2GC 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GD          TCGA-EE-A2GE          TCGA-EE-A2GH 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GI          TCGA-EE-A2GJ          TCGA-EE-A2GK 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GL          TCGA-EE-A2GM          TCGA-EE-A2GN 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GO          TCGA-EE-A2GP          TCGA-EE-A2GR 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GS          TCGA-EE-A2GT          TCGA-EE-A2GU 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" 
         TCGA-EE-A2M5          TCGA-EE-A2M6          TCGA-EE-A2M7 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2M8          TCGA-EE-A2MC          TCGA-EE-A2MD 
"HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2ME          TCGA-EE-A2MG          TCGA-EE-A2MH 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2MI          TCGA-EE-A2MJ          TCGA-EE-A2MK 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" 
         TCGA-EE-A2ML          TCGA-EE-A2MM          TCGA-EE-A2MN 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2MP          TCGA-EE-A2MQ          TCGA-EE-A2MR 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2MS          TCGA-EE-A2MT          TCGA-EE-A2MU 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A3AA          TCGA-EE-A3AB          TCGA-EE-A3AC 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A3AD          TCGA-EE-A3AE          TCGA-EE-A3AF 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A3AG          TCGA-EE-A3AH          TCGA-ER-A19D 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-ER-A19F          TCGA-ER-A19J          TCGA-ER-A19L 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-ER-A19N          TCGA-ER-A1A1          TCGA-ER-A3ET 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1YW          TCGA-FS-A1YX          TCGA-FS-A1YY 
  "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1Z0          TCGA-FS-A1Z3          TCGA-FS-A1Z4 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1Z7          TCGA-FS-A1ZA          TCGA-FS-A1ZB 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZD          TCGA-FS-A1ZE          TCGA-FS-A1ZF 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZG          TCGA-FS-A1ZH          TCGA-FS-A1ZJ 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZK          TCGA-FS-A1ZM          TCGA-FS-A1ZP 
  "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZR          TCGA-FS-A1ZS          TCGA-FS-A1ZT 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZU          TCGA-FS-A1ZW          TCGA-FS-A1ZY 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZZ          TCGA-FW-A3I3          TCGA-GN-A261 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-GN-A262          TCGA-GN-A264          TCGA-GN-A265 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-GN-A266          TCGA-GN-A267          TCGA-GN-A268 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-GN-A26A          TCGA-GN-A26D 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-D3-A1Q7          TCGA-D3-A3C6          TCGA-D3-A3CC 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-D3-A3MO          TCGA-D3-A3MV          TCGA-D9-A148 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-D9-A149          TCGA-D9-A1JW          TCGA-D9-A1JX 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1HV          TCGA-DA-A1HW          TCGA-DA-A1HY 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1I0          TCGA-DA-A1I1          TCGA-DA-A1I2 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1I4          TCGA-DA-A1I5          TCGA-DA-A1I7 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1I8          TCGA-DA-A1IA          TCGA-DA-A1IB 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A1IC          TCGA-DA-A3F2          TCGA-DA-A3F3 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-DA-A3F5          TCGA-DA-A3F8          TCGA-EE-A17X 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A17Z          TCGA-EE-A181          TCGA-EE-A182 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A183          TCGA-EE-A185          TCGA-EE-A20B 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A20F          TCGA-EE-A20H          TCGA-EE-A29A 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29C          TCGA-EE-A29D          TCGA-EE-A29E 
"HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29H          TCGA-EE-A29L          TCGA-EE-A29M 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" 
         TCGA-EE-A29N          TCGA-EE-A29P          TCGA-EE-A29Q 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29R          TCGA-EE-A29S          TCGA-EE-A29T 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A29V          TCGA-EE-A29X          TCGA-EE-A2A0 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2A1          TCGA-EE-A2A2          TCGA-EE-A2A5 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2A6          TCGA-EE-A2GB          TCGA-EE-A2GC 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GD          TCGA-EE-A2GE          TCGA-EE-A2GH 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GI          TCGA-EE-A2GJ          TCGA-EE-A2GK 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GL          TCGA-EE-A2GM          TCGA-EE-A2GN 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GO          TCGA-EE-A2GP          TCGA-EE-A2GR 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2GS          TCGA-EE-A2GT          TCGA-EE-A2GU 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" 
         TCGA-EE-A2M5          TCGA-EE-A2M6          TCGA-EE-A2M7 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2M8          TCGA-EE-A2MC          TCGA-EE-A2MD 
"HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2ME          TCGA-EE-A2MG          TCGA-EE-A2MH 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2MI          TCGA-EE-A2MJ          TCGA-EE-A2MK 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE"   "HIST1H2AA MUTATED" 
         TCGA-EE-A2ML          TCGA-EE-A2MM          TCGA-EE-A2MN 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2MP          TCGA-EE-A2MQ          TCGA-EE-A2MR 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A2MS          TCGA-EE-A2MT          TCGA-EE-A2MU 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A3AA          TCGA-EE-A3AB          TCGA-EE-A3AC 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A3AD          TCGA-EE-A3AE          TCGA-EE-A3AF 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-EE-A3AG          TCGA-EE-A3AH          TCGA-ER-A19D 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-ER-A19F          TCGA-ER-A19J          TCGA-ER-A19L 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-ER-A19N          TCGA-ER-A1A1          TCGA-ER-A3ET 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1YW          TCGA-FS-A1YX          TCGA-FS-A1YY 
  "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1Z0          TCGA-FS-A1Z3          TCGA-FS-A1Z4 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1Z7          TCGA-FS-A1ZA          TCGA-FS-A1ZB 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZD          TCGA-FS-A1ZE          TCGA-FS-A1ZF 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZG          TCGA-FS-A1ZH          TCGA-FS-A1ZJ 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZK          TCGA-FS-A1ZM          TCGA-FS-A1ZP 
  "HIST1H2AA MUTATED" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZR          TCGA-FS-A1ZS          TCGA-FS-A1ZT 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZU          TCGA-FS-A1ZW          TCGA-FS-A1ZY 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-FS-A1ZZ          TCGA-FW-A3I3          TCGA-GN-A261 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-GN-A262          TCGA-GN-A264          TCGA-GN-A265 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-GN-A266          TCGA-GN-A267          TCGA-GN-A268 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
         TCGA-GN-A26A          TCGA-GN-A26D 
"HIST1H2AA WILD-TYPE" "HIST1H2AA WILD-TYPE" 
[1] "hr=" "1.1"
D22V2, continuous
D22V3, binary
                     cls
clus                   0  1
  HIST1H2AA MUTATED    3  4
  HIST1H2AA WILD-TYPE 54 85
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  HIST1H2AA MUTATED      3    4
  HIST1H2AA WILD-TYPE   54   85
        clus
vv       HIST1H2AA MUTATED HIST1H2AA WILD-TYPE
  FEMALE                 3                  54
  MALE                   4                  85
                     vv
clus                   M0  M1 M1A M1B M1C
  HIST1H2AA MUTATED     7   0   0   0   0
  HIST1H2AA WILD-TYPE 117   2   1   1   2
D22V4, multiclass
                     vv
clus                  N0 N1 N1A N1B N2A N2B N2C N3 NX
  HIST1H2AA MUTATED    6  0   0   1   0   0   0  0  0
  HIST1H2AA WILD-TYPE 75  2   7  11   3   9   5 10  2
D22V5, multiclass
D22V6, continuous
                     vv
clus                  STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  HIST1H2AA MUTATED         1        1        2        2         0         0
  HIST1H2AA WILD-TYPE      16        8        9       16         7         8
                     vv
clus                  STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  HIST1H2AA MUTATED           0         0          0          0          1
  HIST1H2AA WILD-TYPE         7         5          6         16         15
                     vv
clus                  STAGE IV
  HIST1H2AA MUTATED          0
  HIST1H2AA WILD-TYPE        4
D22V7, multiclass

Clustering(23) Variable = RPTN MUTATION ANALYSIS
D23V1, survival
                sevent
clus2             0  1
  RPTN MUTATED   13  9
  RPTN WILD-TYPE 59 62
  RPTN MUTATED RPTN WILD-TYPE 
            22            121 
  RPTN MUTATED RPTN WILD-TYPE 
             9             62 
$`RPTN MUTATED`
TCGA-D3-A3C6 TCGA-D9-A1JW TCGA-DA-A1HV TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A20F 
       58.03         2.70        48.89        29.82        33.73        78.87 
TCGA-EE-A29E TCGA-EE-A29M TCGA-EE-A29S TCGA-EE-A2A6 TCGA-EE-A2GD TCGA-EE-A2GH 
       39.62        44.35        55.89        58.75       314.53       182.01 
TCGA-EE-A2GJ TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2MD TCGA-EE-A2MJ TCGA-EE-A2MR 
       89.33        19.56        21.67        47.28        96.23       103.56 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-FS-A1Z3 TCGA-GN-A266 
       26.73        13.81        20.91        10.09 

$`RPTN WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
      121.22        71.24         9.30        21.47       148.31        49.74 
TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 
        6.38        36.03       117.17        20.38       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17Z 
       68.09        28.60        10.49       215.44        15.68         8.65 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A 
       14.70        26.86         4.93       109.64       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P 
       47.84        13.97        32.19         2.56        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       37.35        14.47       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE 
       78.94        24.43        39.25        47.54        43.23       135.91 
TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       22.55        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 
       13.87        14.30        55.59        67.13       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       19.76        61.51       103.27       103.17        16.96       204.62 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      136.44        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
        3.68        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      228.59       202.62        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      120.46       117.93        84.72        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  RPTN MUTATED RPTN WILD-TYPE 
           2.7            0.2 
  RPTN MUTATED RPTN WILD-TYPE 
        314.53         345.96 
  RPTN MUTATED RPTN WILD-TYPE 
        45.815         47.840 
[1] "2.7 - 314.5 (45.8)" "0.2 - 346.0 (47.8)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE"   "RPTN MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"RPTN WILD-TYPE"   "RPTN MUTATED"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE"   "RPTN MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"RPTN WILD-TYPE"   "RPTN MUTATED"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE"   "RPTN MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"RPTN WILD-TYPE"   "RPTN MUTATED"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "RPTN MUTATED" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"RPTN WILD-TYPE" "RPTN WILD-TYPE"   "RPTN MUTATED" "RPTN WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"RPTN WILD-TYPE" "RPTN WILD-TYPE" "RPTN WILD-TYPE" 
[1] "hr=" "1.2"
D23V2, continuous
D23V3, binary
                cls
clus              0  1
  RPTN MUTATED    8 15
  RPTN WILD-TYPE 49 74
[1] "tbl2"
                cls
clus             [,1] [,2]
  RPTN MUTATED      8   15
  RPTN WILD-TYPE   49   74
        clus
vv       RPTN MUTATED RPTN WILD-TYPE
  FEMALE            8             49
  MALE             15             74
                vv
clus              M0  M1 M1A M1B M1C
  RPTN MUTATED    19   0   0   0   0
  RPTN WILD-TYPE 105   2   1   1   2
D23V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  RPTN MUTATED   16  0   0   1   1   1   0  0  0
  RPTN WILD-TYPE 65  2   7  11   2   8   5 10  2
D23V5, multiclass
D23V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  RPTN MUTATED         3        4        2        4         2         1
  RPTN WILD-TYPE      14        5        9       14         5         7
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  RPTN MUTATED           0         0          0          2          0        0
  RPTN WILD-TYPE         7         5          6         14         16        4
D23V7, multiclass

Clustering(24) Variable = ZNF479 MUTATION ANALYSIS
D24V1, survival
                  sevent
clus2               0  1
  ZNF479 MUTATED   10  3
  ZNF479 WILD-TYPE 62 68
  ZNF479 MUTATED ZNF479 WILD-TYPE 
              13              130 
  ZNF479 MUTATED ZNF479 WILD-TYPE 
               3               68 
$`ZNF479 MUTATED`
TCGA-D3-A3MV TCGA-DA-A1IB TCGA-EE-A182 TCGA-EE-A29D TCGA-EE-A2A1 TCGA-EE-A2GC 
       21.47        23.44        14.70        13.97        78.94        43.23 
TCGA-EE-A2GI TCGA-EE-A2MD TCGA-EE-A2MS TCGA-ER-A3ET TCGA-FS-A1ZM TCGA-FW-A3I3 
       22.55        47.28       136.44        80.32       101.26         0.20 
TCGA-GN-A262 
      120.46 

$`ZNF479 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       65.92        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        33.73        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H 
       78.87       168.26        63.32        47.84        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
        2.56        44.35        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 
       55.89       345.96        25.87        17.92        46.82        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       39.25        58.75        47.54       314.53       135.91       182.01 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
      129.24        28.80        19.76        61.51       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU 
       47.54       248.61        43.23       103.56        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       44.05        79.99       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
       27.06        27.02        76.41       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  ZNF479 MUTATED ZNF479 WILD-TYPE 
            0.20             2.56 
  ZNF479 MUTATED ZNF479 WILD-TYPE 
          136.44           345.96 
  ZNF479 MUTATED ZNF479 WILD-TYPE 
          43.230           48.215 
[1] "0.2 - 136.4 (43.2)" "2.6 - 346.0 (48.2)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
  "ZNF479 MUTATED" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ZNF479 WILD-TYPE"   "ZNF479 MUTATED" "ZNF479 WILD-TYPE"   "ZNF479 MUTATED" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" "ZNF479 WILD-TYPE" 
[1] "hr=" "1.8"
D24V2, continuous
D24V3, binary
                  cls
clus                0  1
  ZNF479 MUTATED    6  7
  ZNF479 WILD-TYPE 51 82
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ZNF479 MUTATED      6    7
  ZNF479 WILD-TYPE   51   82
        clus
vv       ZNF479 MUTATED ZNF479 WILD-TYPE
  FEMALE              6               51
  MALE                7               82
                  vv
clus                M0  M1 M1A M1B M1C
  ZNF479 MUTATED    11   1   0   0   0
  ZNF479 WILD-TYPE 113   1   1   1   2
D24V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  ZNF479 MUTATED    6  0   1   2   1   1   1  0  0
  ZNF479 WILD-TYPE 75  2   6  10   2   8   4 10  2
D24V5, multiclass
D24V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  ZNF479 MUTATED         0        1        1        2         0         1
  ZNF479 WILD-TYPE      17        8       10       16         7         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  ZNF479 MUTATED           0         1          1          1          3
  ZNF479 WILD-TYPE         7         4          5         15         13
                  vv
clus               STAGE IV
  ZNF479 MUTATED          1
  ZNF479 WILD-TYPE        3
D24V7, multiclass

Clustering(25) Variable = C8A MUTATION ANALYSIS
D25V1, survival
               sevent
clus2            0  1
  C8A MUTATED    9  8
  C8A WILD-TYPE 63 63
  C8A MUTATED C8A WILD-TYPE 
           17           126 
  C8A MUTATED C8A WILD-TYPE 
            8            63 
$`C8A MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3MV TCGA-DA-A1I0 TCGA-DA-A1IC TCGA-DA-A3F8 TCGA-EE-A181 
      121.22        21.47        20.38        68.09        15.68        33.73 
TCGA-EE-A29D TCGA-EE-A29L TCGA-EE-A2A2 TCGA-EE-A2GC TCGA-EE-A2GT TCGA-EE-A2GU 
       13.97         2.56        24.43        43.23        19.56        67.13 
TCGA-EE-A3AA TCGA-EE-A3AD TCGA-ER-A19F TCGA-FS-A1ZK TCGA-GN-A266 
        4.24         3.68        26.37        23.93        10.09 

$`C8A WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW 
       58.03        71.24         9.30       148.31        49.74         2.70 
TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 
        6.38        48.89        36.03       117.17       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 
       28.60        10.49       215.44        29.82         8.65        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       47.84        39.62        32.19        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD 
       46.82        78.94        39.25        58.75        47.54       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AE 
      136.44        41.59        53.26       122.73        25.84        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L 
       13.81        23.47       138.77        12.59         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        84.72        64.41        62.76        32.48        39.58 

  C8A MUTATED C8A WILD-TYPE 
         2.56          0.20 
  C8A MUTATED C8A WILD-TYPE 
       121.22        345.96 
  C8A MUTATED C8A WILD-TYPE 
        21.47         49.61 
[1] "2.6 - 121.2 (21.5)" "0.2 - 346.0 (49.6)"
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
  "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
  "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
  "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
  "C8A MUTATED"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
  "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
  "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
  "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
  "C8A MUTATED"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
  "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
  "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
  "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
  "C8A MUTATED"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE"   "C8A MUTATED" "C8A WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"C8A WILD-TYPE" "C8A WILD-TYPE" "C8A WILD-TYPE" 
[1] "hr=" "2.1"
D25V2, continuous
D25V3, binary
               cls
clus             0  1
  C8A MUTATED    4 15
  C8A WILD-TYPE 53 74
[1] "tbl2"
               cls
clus            [,1] [,2]
  C8A MUTATED      4   15
  C8A WILD-TYPE   53   74
        clus
vv       C8A MUTATED C8A WILD-TYPE
  FEMALE           4            53
  MALE            15            74
               vv
clus             M0  M1 M1A M1B M1C
  C8A MUTATED    13   0   1   0   0
  C8A WILD-TYPE 111   2   0   1   2
D25V4, multiclass
               vv
clus            N0 N1 N1A N1B N2A N2B N2C N3 NX
  C8A MUTATED    7  0   0   2   1   1   1  2  0
  C8A WILD-TYPE 74  2   7  10   2   8   4  8  2
D25V5, multiclass
D25V6, continuous
               vv
clus            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  C8A MUTATED         0        1        1        2         1         1
  C8A WILD-TYPE      17        8       10       16         6         7
               vv
clus            STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  C8A MUTATED           0         0          0          4          3        0
  C8A WILD-TYPE         7         5          6         12         13        4
D25V7, multiclass

Clustering(26) Variable = FUT9 MUTATION ANALYSIS
D26V1, survival
                sevent
clus2             0  1
  FUT9 MUTATED    5 10
  FUT9 WILD-TYPE 67 61
  FUT9 MUTATED FUT9 WILD-TYPE 
            15            128 
  FUT9 MUTATED FUT9 WILD-TYPE 
            10             61 
$`FUT9 MUTATED`
TCGA-DA-A1HV TCGA-EE-A181 TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A2GC 
       48.89        33.73        13.97        39.62        18.58        43.23 
TCGA-EE-A2GR TCGA-EE-A2M5 TCGA-EE-A2MI TCGA-EE-A2MS TCGA-FS-A1YW TCGA-FS-A1YY 
       14.30        21.67       204.62       136.44       216.92       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1ZJ TCGA-GN-A268 
      202.62        47.38        62.76 

$`FUT9 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H 
      109.64        78.87       168.26        63.32        47.84        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
        2.56        44.35        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       39.25        58.75        47.54       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
      101.95        13.87        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
       16.96        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YX TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       79.99        80.32        48.59        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  FUT9 MUTATED FUT9 WILD-TYPE 
         13.97           0.20 
  FUT9 MUTATED FUT9 WILD-TYPE 
        228.59         345.96 
  FUT9 MUTATED FUT9 WILD-TYPE 
         47.38          47.69 
[1] "14.0 - 228.6 (47.4)" "0.2 - 346.0 (47.7)" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"FUT9 WILD-TYPE"   "FUT9 MUTATED"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
  "FUT9 MUTATED" "FUT9 WILD-TYPE"   "FUT9 MUTATED"   "FUT9 MUTATED" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"FUT9 WILD-TYPE"   "FUT9 MUTATED"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
  "FUT9 MUTATED" "FUT9 WILD-TYPE"   "FUT9 MUTATED"   "FUT9 MUTATED" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"FUT9 WILD-TYPE"   "FUT9 MUTATED"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
  "FUT9 MUTATED" "FUT9 WILD-TYPE"   "FUT9 MUTATED"   "FUT9 MUTATED" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE"   "FUT9 MUTATED" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "FUT9 MUTATED" "FUT9 WILD-TYPE" "FUT9 WILD-TYPE" 
[1] "hr=" "1"  
D26V2, continuous
D26V3, binary
                cls
clus              0  1
  FUT9 MUTATED    6 10
  FUT9 WILD-TYPE 51 79
[1] "tbl2"
                cls
clus             [,1] [,2]
  FUT9 MUTATED      6   10
  FUT9 WILD-TYPE   51   79
        clus
vv       FUT9 MUTATED FUT9 WILD-TYPE
  FEMALE            6             51
  MALE             10             79
                vv
clus              M0  M1 M1A M1B M1C
  FUT9 MUTATED    15   0   0   0   0
  FUT9 WILD-TYPE 109   2   1   1   2
D26V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  FUT9 MUTATED   12  0   0   2   0   1   0  0  0
  FUT9 WILD-TYPE 69  2   7  10   3   8   5 10  2
D26V5, multiclass
D26V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  FUT9 MUTATED         2        1        1        3         1         3
  FUT9 WILD-TYPE      15        8       10       15         6         5
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  FUT9 MUTATED           0         0          0          2          1        0
  FUT9 WILD-TYPE         7         5          6         14         15        4
D26V7, multiclass

Clustering(27) Variable = ZNF679 MUTATION ANALYSIS
D27V1, survival
                  sevent
clus2               0  1
  ZNF679 MUTATED    9  6
  ZNF679 WILD-TYPE 63 65
  ZNF679 MUTATED ZNF679 WILD-TYPE 
              15              128 
  ZNF679 MUTATED ZNF679 WILD-TYPE 
               6               65 
$`ZNF679 MUTATED`
TCGA-DA-A1HW TCGA-DA-A1I7 TCGA-DA-A3F8 TCGA-EE-A182 TCGA-EE-A29M TCGA-EE-A29S 
       36.03        61.18        15.68        14.70        44.35        55.89 
TCGA-EE-A2GC TCGA-EE-A2GR TCGA-EE-A2GU TCGA-EE-A2MD TCGA-EE-A2MS TCGA-EE-A2MT 
       43.23        14.30        67.13        47.28       136.44        41.59 
TCGA-FS-A1ZK TCGA-FS-A1ZZ TCGA-GN-A266 
       23.93        27.02        10.09 

$`ZNF679 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        48.89       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA 
      194.83       176.55        35.93       107.34        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17X 
       23.44        68.09        28.60        10.49       215.44        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
        8.65        33.73        26.86         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H 
      168.26        63.32        47.84        13.97        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29T 
        2.56        18.58        56.42        37.35        14.47       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       58.75        47.54       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       13.87        55.59        19.56        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       19.76        61.51       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
       43.23       103.56        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
        9.70        32.71        47.38       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 
      148.77        53.16        26.56        49.48        27.06         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  ZNF679 MUTATED ZNF679 WILD-TYPE 
           10.09             0.20 
  ZNF679 MUTATED ZNF679 WILD-TYPE 
          136.44           345.96 
  ZNF679 MUTATED ZNF679 WILD-TYPE 
           41.59            48.87 
[1] "10.1 - 136.4 (41.6)" "0.2 - 346.0 (48.9)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED"   "ZNF679 MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED"   "ZNF679 MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED"   "ZNF679 MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "ZNF679 MUTATED" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE"   "ZNF679 MUTATED" "ZNF679 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" "ZNF679 WILD-TYPE" 
[1] "hr=" "1.2"
D27V2, continuous
D27V3, binary
                  cls
clus                0  1
  ZNF679 MUTATED    5 10
  ZNF679 WILD-TYPE 52 79
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ZNF679 MUTATED      5   10
  ZNF679 WILD-TYPE   52   79
        clus
vv       ZNF679 MUTATED ZNF679 WILD-TYPE
  FEMALE              5               52
  MALE               10               79
                  vv
clus                M0  M1 M1A M1B M1C
  ZNF679 MUTATED    14   0   0   0   0
  ZNF679 WILD-TYPE 110   2   1   1   2
D27V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  ZNF679 MUTATED   10  0   0   2   0   2   0  0  0
  ZNF679 WILD-TYPE 71  2   7  10   3   7   5 10  2
D27V5, multiclass
D27V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  ZNF679 MUTATED         0        1        2        4         1         2
  ZNF679 WILD-TYPE      17        8        9       14         6         6
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  ZNF679 MUTATED           0         0          0          3          1
  ZNF679 WILD-TYPE         7         5          6         13         15
                  vv
clus               STAGE IV
  ZNF679 MUTATED          0
  ZNF679 WILD-TYPE        4
D27V7, multiclass

Clustering(28) Variable = NRK MUTATION ANALYSIS
D28V1, survival
               sevent
clus2            0  1
  NRK MUTATED    7 10
  NRK WILD-TYPE 65 61
  NRK MUTATED NRK WILD-TYPE 
           17           126 
  NRK MUTATED NRK WILD-TYPE 
           10            61 
$`NRK MUTATED`
TCGA-DA-A1I7 TCGA-DA-A1IC TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F 
       61.18        68.09         8.65        26.86         4.93        78.87 
TCGA-EE-A29Q TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2MD 
       37.35        78.94        39.25        14.30        55.59        47.28 
TCGA-EE-A2MQ TCGA-EE-A3AF TCGA-ER-A1A1 TCGA-FS-A1YY TCGA-FS-A1ZK 
       43.23        13.81        79.99       228.59        23.93 

$`NRK WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 
       20.38       194.83       176.55        35.93       107.34        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       65.92        23.44        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A 
       29.82        33.73        14.70       109.64       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       47.84        13.97        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       18.58        56.42        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       17.92        46.82        24.43        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GT 
       55.00        75.48        90.94       101.95        13.87        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       67.13        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MS 
      203.01       167.87        47.54       248.61       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       26.73        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z0 
      131.08        44.05        80.32       216.92        48.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM 
       40.27        15.45         9.70        32.71        47.38       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       27.06        27.02         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        62.76        32.48        39.58 

  NRK MUTATED NRK WILD-TYPE 
         4.93          0.20 
  NRK MUTATED NRK WILD-TYPE 
       228.59        345.96 
  NRK MUTATED NRK WILD-TYPE 
       43.230        48.215 
[1] "4.9 - 228.6 (43.2)" "0.2 - 346.0 (48.2)"
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
  "NRK MUTATED"   "NRK MUTATED" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED"   "NRK MUTATED" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
  "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
  "NRK MUTATED"   "NRK MUTATED" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED"   "NRK MUTATED" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
  "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
  "NRK MUTATED"   "NRK MUTATED" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED"   "NRK MUTATED" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
  "NRK MUTATED" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE"   "NRK MUTATED" "NRK WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"NRK WILD-TYPE" "NRK WILD-TYPE" "NRK WILD-TYPE" 
[1] "hr=" "1.4"
D28V2, continuous
D28V3, binary
               cls
clus             0  1
  NRK MUTATED    6 12
  NRK WILD-TYPE 51 77
[1] "tbl2"
               cls
clus            [,1] [,2]
  NRK MUTATED      6   12
  NRK WILD-TYPE   51   77
        clus
vv       NRK MUTATED NRK WILD-TYPE
  FEMALE           6            51
  MALE            12            77
               vv
clus             M0  M1 M1A M1B M1C
  NRK MUTATED    16   0   0   0   0
  NRK WILD-TYPE 108   2   1   1   2
D28V4, multiclass
               vv
clus            N0 N1 N1A N1B N2A N2B N2C N3 NX
  NRK MUTATED   11  0   0   0   1   1   1  2  0
  NRK WILD-TYPE 70  2   7  12   2   8   4  8  2
D28V5, multiclass
D28V6, continuous
               vv
clus            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  NRK MUTATED         1        0        3        4         1         2
  NRK WILD-TYPE      16        9        8       14         6         6
               vv
clus            STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  NRK MUTATED           0         0          1          2          2        0
  NRK WILD-TYPE         7         5          5         14         14        4
D28V7, multiclass

Clustering(29) Variable = CDH9 MUTATION ANALYSIS
D29V1, survival
                sevent
clus2             0  1
  CDH9 MUTATED   14 12
  CDH9 WILD-TYPE 58 59
  CDH9 MUTATED CDH9 WILD-TYPE 
            26            117 
  CDH9 MUTATED CDH9 WILD-TYPE 
            12             59 
$`CDH9 MUTATED`
TCGA-D9-A1JW TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A20B TCGA-EE-A29D 
        2.70       215.44        29.82        33.73       109.64        13.97 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A2A0 TCGA-EE-A2A6 TCGA-EE-A2GC 
       39.62         2.56        44.35        46.82        58.75        43.23 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GL TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2MM 
       22.55        89.33        55.00        21.67       129.24       167.87 
TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A3AH TCGA-ER-A19N TCGA-FS-A1Z0 TCGA-FS-A1ZB 
      248.61       136.44       138.77        44.05       202.62        48.85 
TCGA-FS-A1ZZ TCGA-GN-A268 
       27.02        62.76 

$`CDH9 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 
       65.92        23.44        68.09        28.60        10.49        15.68 
TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H 
        8.65        14.70        26.86         4.93        78.87       168.26 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       63.32        47.84        32.19        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A1 
       14.47        55.89       345.96        25.87        17.92        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       24.43        39.25        47.54       314.53       135.91       182.01 
TCGA-EE-A2GK TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       54.71        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       55.59        19.56        67.13        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT 
      144.76       203.01        47.54        43.23       103.56        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       13.81        23.47        12.59        26.37         6.41       131.08 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 
       79.99        80.32       216.92        48.59       228.59        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
       28.08         7.76        27.68        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
        0.20        76.41       120.46       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        32.48        39.58 

  CDH9 MUTATED CDH9 WILD-TYPE 
          2.56           0.20 
  CDH9 MUTATED CDH9 WILD-TYPE 
        248.61         345.96 
  CDH9 MUTATED CDH9 WILD-TYPE 
        47.835         47.540 
[1] "2.6 - 248.6 (47.8)" "0.2 - 346.0 (47.5)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
  "CDH9 MUTATED" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"CDH9 WILD-TYPE"   "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
  "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
  "CDH9 MUTATED" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"CDH9 WILD-TYPE"   "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
  "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
  "CDH9 MUTATED" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"CDH9 WILD-TYPE"   "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
  "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "CDH9 MUTATED"   "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"CDH9 WILD-TYPE"   "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE"   "CDH9 MUTATED" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "CDH9 MUTATED" "CDH9 WILD-TYPE" "CDH9 WILD-TYPE" 
[1] "hr=" "1.3"
D29V2, continuous
D29V3, binary
                cls
clus              0  1
  CDH9 MUTATED   10 16
  CDH9 WILD-TYPE 47 73
[1] "tbl2"
                cls
clus             [,1] [,2]
  CDH9 MUTATED     10   16
  CDH9 WILD-TYPE   47   73
        clus
vv       CDH9 MUTATED CDH9 WILD-TYPE
  FEMALE           10             47
  MALE             16             73
                vv
clus             M0 M1 M1A M1B M1C
  CDH9 MUTATED   25  0   0   0   0
  CDH9 WILD-TYPE 99  2   1   1   2
D29V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  CDH9 MUTATED   20  0   0   2   1   0   0  2  0
  CDH9 WILD-TYPE 61  2   7  10   2   9   5  8  2
D29V5, multiclass
D29V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CDH9 MUTATED         4        5        1        5         2         3
  CDH9 WILD-TYPE      13        4       10       13         5         5
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  CDH9 MUTATED           0         0          0          1          3        0
  CDH9 WILD-TYPE         7         5          6         15         13        4
D29V7, multiclass

Clustering(30) Variable = PRAMEF11 MUTATION ANALYSIS
D30V1, survival
                    sevent
clus2                 0  1
  PRAMEF11 MUTATED    5  8
  PRAMEF11 WILD-TYPE 67 63
  PRAMEF11 MUTATED PRAMEF11 WILD-TYPE 
                13                130 
  PRAMEF11 MUTATED PRAMEF11 WILD-TYPE 
                 8                 63 
$`PRAMEF11 MUTATED`
TCGA-EE-A29D TCGA-EE-A29X TCGA-EE-A2GB TCGA-EE-A2GO TCGA-EE-A2MQ TCGA-EE-A2MR 
       13.97        17.92        47.54       101.95        43.23       103.56 
TCGA-EE-A3AE TCGA-ER-A19F TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZM TCGA-FS-A1ZZ 
       26.73        26.37        27.68        48.85       101.26        27.02 
TCGA-GN-A266 
       10.09 

$`PRAMEF11 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       47.84        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC 
       46.82        78.94        24.43        39.25        58.75        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        75.48        90.94        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      136.44        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J 
        3.68        13.81        23.47       138.77        12.59         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZD 
      228.59       202.62        20.91        28.08         7.76        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.06         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  PRAMEF11 MUTATED PRAMEF11 WILD-TYPE 
             10.09               0.20 
  PRAMEF11 MUTATED PRAMEF11 WILD-TYPE 
            103.56             345.96 
  PRAMEF11 MUTATED PRAMEF11 WILD-TYPE 
             27.68              48.74 
[1] "10.1 - 103.6 (27.7)" "0.2 - 346.0 (48.7)" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED"   "PRAMEF11 MUTATED" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED"   "PRAMEF11 MUTATED" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED"   "PRAMEF11 MUTATED" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED"   "PRAMEF11 MUTATED" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED"   "PRAMEF11 MUTATED" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED"   "PRAMEF11 MUTATED" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"PRAMEF11 WILD-TYPE"   "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
  "PRAMEF11 MUTATED" "PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"PRAMEF11 WILD-TYPE" "PRAMEF11 WILD-TYPE" 
[1] "hr=" "1.8"
D30V2, continuous
D30V3, binary
                    cls
clus                  0  1
  PRAMEF11 MUTATED    6  7
  PRAMEF11 WILD-TYPE 51 82
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  PRAMEF11 MUTATED      6    7
  PRAMEF11 WILD-TYPE   51   82
        clus
vv       PRAMEF11 MUTATED PRAMEF11 WILD-TYPE
  FEMALE                6                 51
  MALE                  7                 82
                    vv
clus                  M0  M1 M1A M1B M1C
  PRAMEF11 MUTATED    12   0   0   0   0
  PRAMEF11 WILD-TYPE 112   2   1   1   2
D30V4, multiclass
                    vv
clus                 N0 N1 N1A N1B N2A N2B N2C N3 NX
  PRAMEF11 MUTATED    7  0   1   1   1   0   2  0  0
  PRAMEF11 WILD-TYPE 74  2   6  11   2   9   3 10  2
D30V5, multiclass
D30V6, continuous
                    vv
clus                 STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PRAMEF11 MUTATED         1        1        1        2         0         1
  PRAMEF11 WILD-TYPE      16        8       10       16         7         7
                    vv
clus                 STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  PRAMEF11 MUTATED           0         1          2          1          1
  PRAMEF11 WILD-TYPE         7         4          4         15         15
                    vv
clus                 STAGE IV
  PRAMEF11 MUTATED          0
  PRAMEF11 WILD-TYPE        4
D30V7, multiclass

Clustering(31) Variable = DDX3X MUTATION ANALYSIS
D31V1, survival
                 sevent
clus2              0  1
  DDX3X MUTATED   10  5
  DDX3X WILD-TYPE 62 66
  DDX3X MUTATED DDX3X WILD-TYPE 
             15             128 
  DDX3X MUTATED DDX3X WILD-TYPE 
              5              66 
$`DDX3X MUTATED`
TCGA-D9-A148 TCGA-DA-A1I0 TCGA-DA-A3F8 TCGA-EE-A20B TCGA-EE-A29E TCGA-EE-A2A1 
      148.31        20.38        15.68       109.64        39.62        78.94 
TCGA-EE-A2GC TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2ML TCGA-EE-A2MU TCGA-EE-A3AA 
       43.23        90.94        13.87       203.01        53.26         4.24 
TCGA-EE-A3AF TCGA-FS-A1Z3 TCGA-FS-A1ZK 
       13.81        20.91        23.93 

$`DDX3X WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 
      121.22        58.03        71.24         9.30        21.47        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 
        2.70         6.38        48.89        36.03       117.17       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17X 
       23.44        68.09        28.60        10.49       215.44        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F 
        8.65        33.73        14.70        26.86         4.93        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L 
      168.26        63.32        47.84        13.97        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2A5 
      345.96        25.87        17.92        46.82        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       58.75        47.54       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GR 
       89.33        54.71        55.00        75.48       101.95        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
      204.62        96.23       144.76       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AB TCGA-EE-A3AC 
       43.23       103.56       136.44        41.59       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
        3.68        26.73        23.47       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
       48.59       228.59       202.62        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       47.38       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  DDX3X MUTATED DDX3X WILD-TYPE 
           4.24            0.20 
  DDX3X MUTATED DDX3X WILD-TYPE 
         203.01          345.96 
  DDX3X MUTATED DDX3X WILD-TYPE 
         39.620          48.215 
[1] "4.2 - 203.0 (39.6)" "0.2 - 346.0 (48.2)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE"   "DDX3X MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
  "DDX3X MUTATED"   "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE"   "DDX3X MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
  "DDX3X MUTATED"   "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE"   "DDX3X MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
  "DDX3X MUTATED"   "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" "DDX3X WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "DDX3X MUTATED" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE"   "DDX3X MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"DDX3X WILD-TYPE" "DDX3X WILD-TYPE" "DDX3X WILD-TYPE" 
[1] "hr=" "1.3"
D31V2, continuous
D31V3, binary
                 cls
clus               0  1
  DDX3X MUTATED    3 12
  DDX3X WILD-TYPE 54 77
[1] "tbl2"
                 cls
clus              [,1] [,2]
  DDX3X MUTATED      3   12
  DDX3X WILD-TYPE   54   77
        clus
vv       DDX3X MUTATED DDX3X WILD-TYPE
  FEMALE             3              54
  MALE              12              77
                 vv
clus               M0  M1 M1A M1B M1C
  DDX3X MUTATED    10   0   1   1   0
  DDX3X WILD-TYPE 114   2   0   0   2
D31V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  DDX3X MUTATED    7  0   1   1   0   1   0  2  0
  DDX3X WILD-TYPE 74  2   6  11   3   8   5  8  2
D31V5, multiclass
D31V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  DDX3X MUTATED         0        1        1        3         1         1
  DDX3X WILD-TYPE      17        8       10       15         6         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DDX3X MUTATED           0         0          0          3          1        0
  DDX3X WILD-TYPE         7         5          6         13         15        4
D31V7, multiclass

Clustering(32) Variable = GRXCR1 MUTATION ANALYSIS
D32V1, survival
                  sevent
clus2               0  1
  GRXCR1 MUTATED    9  5
  GRXCR1 WILD-TYPE 63 66
  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
              14              129 
  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
               5               66 
$`GRXCR1 MUTATED`
TCGA-DA-A3F8 TCGA-EE-A29L TCGA-EE-A29P TCGA-EE-A29S TCGA-EE-A2GC TCGA-EE-A2GJ 
       15.68         2.56        56.42        55.89        43.23        89.33 
TCGA-EE-A2GO TCGA-EE-A2M5 TCGA-EE-A2MJ TCGA-EE-A2MS TCGA-EE-A3AE TCGA-FS-A1ZZ 
      101.95        21.67        96.23       136.44        26.73        27.02 
TCGA-GN-A265 TCGA-GN-A268 
       84.72        62.76 

$`GRXCR1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
      215.44        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q 
       13.97        39.62        32.19        44.35        18.58        37.35 
TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       14.47       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       24.43        39.25        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        22.55        54.71        55.00        75.48        90.94 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
       13.87        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
       16.96       204.62       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73        25.84         3.68        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A266 
       27.06         0.20        76.41       120.46       117.93        10.09 
TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        32.48        39.58 

  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
            2.56             0.20 
  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
          136.44           345.96 
  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
          56.155           47.540 
[1] "2.6 - 136.4 (56.2)" "0.2 - 346.0 (47.5)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"GRXCR1 WILD-TYPE"   "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
  "GRXCR1 MUTATED" "GRXCR1 WILD-TYPE" "GRXCR1 WILD-TYPE" 
[1] "hr=" "1.3"
D32V2, continuous
D32V3, binary
                  cls
clus                0  1
  GRXCR1 MUTATED    5 10
  GRXCR1 WILD-TYPE 52 79
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GRXCR1 MUTATED      5   10
  GRXCR1 WILD-TYPE   52   79
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  FEMALE              5               52
  MALE               10               79
                  vv
clus                M0  M1 M1A M1B M1C
  GRXCR1 MUTATED    13   0   0   0   0
  GRXCR1 WILD-TYPE 111   2   1   1   2
D32V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  GRXCR1 MUTATED   11  0   0   0   0   1   0  1  0
  GRXCR1 WILD-TYPE 70  2   7  12   3   8   5  9  2
D32V5, multiclass
D32V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  GRXCR1 MUTATED         1        2        0        3         1         3
  GRXCR1 WILD-TYPE      16        7       11       15         6         5
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  GRXCR1 MUTATED           1         0          0          1          1
  GRXCR1 WILD-TYPE         6         5          6         15         15
                  vv
clus               STAGE IV
  GRXCR1 MUTATED          0
  GRXCR1 WILD-TYPE        4
D32V7, multiclass

Clustering(33) Variable = PRB2 MUTATION ANALYSIS
D33V1, survival
                sevent
clus2             0  1
  PRB2 MUTATED   12  8
  PRB2 WILD-TYPE 60 63
  PRB2 MUTATED PRB2 WILD-TYPE 
            20            123 
  PRB2 MUTATED PRB2 WILD-TYPE 
             8             63 
$`PRB2 MUTATED`
TCGA-D9-A1JW TCGA-DA-A3F3 TCGA-EE-A181 TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29N 
        2.70        10.49        33.73        13.97        39.62        18.58 
TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2GC TCGA-EE-A2GI TCGA-EE-A2GJ 
       55.89        25.87        46.82        43.23        22.55        89.33 
TCGA-EE-A2GR TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AE 
       14.30       103.56       136.44         4.24        25.84        26.73 
TCGA-EE-A3AH TCGA-FS-A1ZA 
      138.77        27.68 

$`PRB2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F5 TCGA-DA-A3F8 
       65.92        23.44        68.09        28.60       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29L 
       78.87       168.26        63.32        47.84        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29X 
       44.35        56.42        37.35        14.47       345.96        17.92 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD 
       78.94        24.43        39.25        58.75        47.54       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      135.91       182.01        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
      101.95        13.87        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A2MU 
      167.87        47.54       248.61        43.23        41.59        53.26 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F 
      122.73         3.68        13.81        23.47        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  PRB2 MUTATED PRB2 WILD-TYPE 
           2.7            0.2 
  PRB2 MUTATED PRB2 WILD-TYPE 
        138.77         345.96 
  PRB2 MUTATED PRB2 WILD-TYPE 
        27.205         49.480 
[1] "2.7 - 138.8 (27.2)" "0.2 - 346.0 (49.5)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRB2 WILD-TYPE"   "PRB2 MUTATED"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "PRB2 MUTATED" "PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
  "PRB2 MUTATED"   "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRB2 WILD-TYPE"   "PRB2 MUTATED"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRB2 WILD-TYPE"   "PRB2 MUTATED"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "PRB2 MUTATED" "PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
  "PRB2 MUTATED"   "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRB2 WILD-TYPE"   "PRB2 MUTATED"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRB2 WILD-TYPE"   "PRB2 MUTATED"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "PRB2 MUTATED" "PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
  "PRB2 MUTATED"   "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRB2 WILD-TYPE"   "PRB2 MUTATED"   "PRB2 MUTATED" "PRB2 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PRB2 WILD-TYPE"   "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
  "PRB2 MUTATED" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE"   "PRB2 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRB2 WILD-TYPE" "PRB2 WILD-TYPE" "PRB2 WILD-TYPE" 
[1] "hr=" "1.2"
D33V2, continuous
D33V3, binary
                cls
clus              0  1
  PRB2 MUTATED    4 17
  PRB2 WILD-TYPE 53 72
[1] "tbl2"
                cls
clus             [,1] [,2]
  PRB2 MUTATED      4   17
  PRB2 WILD-TYPE   53   72
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  FEMALE            4             53
  MALE             17             72
                vv
clus              M0  M1 M1A M1B M1C
  PRB2 MUTATED    18   0   0   0   0
  PRB2 WILD-TYPE 106   2   1   1   2
D33V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  PRB2 MUTATED   12  0   0   3   1   1   1  0  0
  PRB2 WILD-TYPE 69  2   7   9   2   8   4 10  2
D33V5, multiclass
D33V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PRB2 MUTATED         1        3        0        4         2         1
  PRB2 WILD-TYPE      16        6       11       14         5         7
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  PRB2 MUTATED           0         0          0          3          2        0
  PRB2 WILD-TYPE         7         5          6         13         14        4
D33V7, multiclass

Clustering(34) Variable = ELF5 MUTATION ANALYSIS
D34V1, survival
                sevent
clus2             0  1
  ELF5 MUTATED    2  2
  ELF5 WILD-TYPE 70 69
  ELF5 MUTATED ELF5 WILD-TYPE 
             4            139 
  ELF5 MUTATED ELF5 WILD-TYPE 
             2             69 
$`ELF5 MUTATED`
TCGA-EE-A2MS TCGA-EE-A3AA TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      136.44         4.24         7.76        27.68 

$`ELF5 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       47.84        13.97        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
      101.95        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       41.59        53.26       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZB TCGA-FS-A1ZD 
      228.59       202.62        20.91        28.08        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  ELF5 MUTATED ELF5 WILD-TYPE 
          4.24           0.20 
  ELF5 MUTATED ELF5 WILD-TYPE 
        136.44         345.96 
  ELF5 MUTATED ELF5 WILD-TYPE 
         17.72          47.84 
[1] "4.2 - 136.4 (17.7)" "0.2 - 346.0 (47.8)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE"   "ELF5 MUTATED" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"ELF5 WILD-TYPE"   "ELF5 MUTATED" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE"   "ELF5 MUTATED"   "ELF5 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE"   "ELF5 MUTATED" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"ELF5 WILD-TYPE"   "ELF5 MUTATED" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE"   "ELF5 MUTATED"   "ELF5 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE"   "ELF5 MUTATED" "ELF5 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"ELF5 WILD-TYPE"   "ELF5 MUTATED" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE"   "ELF5 MUTATED"   "ELF5 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"ELF5 WILD-TYPE" "ELF5 WILD-TYPE" "ELF5 WILD-TYPE" 
[1] "hr=" "1.8"
D34V2, continuous
D34V3, binary
                cls
clus              0  1
  ELF5 MUTATED    1  3
  ELF5 WILD-TYPE 56 86
[1] "tbl2"
                cls
clus             [,1] [,2]
  ELF5 MUTATED      1    3
  ELF5 WILD-TYPE   56   86
        clus
vv       ELF5 MUTATED ELF5 WILD-TYPE
  FEMALE            1             56
  MALE              3             86
                vv
clus              M0  M1 M1A M1B M1C
  ELF5 MUTATED     3   0   0   0   0
  ELF5 WILD-TYPE 121   2   1   1   2
D34V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  ELF5 MUTATED    1  0   0   1   0   0   1  0  0
  ELF5 WILD-TYPE 80  2   7  11   3   9   4 10  2
D34V5, multiclass
D34V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  ELF5 MUTATED         0        0        0        1         0         0
  ELF5 WILD-TYPE      17        9       11       17         7         8
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  ELF5 MUTATED           0         0          0          1          1        0
  ELF5 WILD-TYPE         7         5          6         15         15        4
D34V7, multiclass

Clustering(35) Variable = IL32 MUTATION ANALYSIS
D35V1, survival
                sevent
clus2             0  1
  IL32 MUTATED    5  1
  IL32 WILD-TYPE 67 70
  IL32 MUTATED IL32 WILD-TYPE 
             6            137 
  IL32 MUTATED IL32 WILD-TYPE 
             1             70 
$`IL32 MUTATED`
TCGA-EE-A2GO TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MS TCGA-FS-A1ZS TCGA-FS-A1ZZ 
      101.95       144.76       203.01       136.44       148.77        27.02 

$`IL32 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       47.84        13.97        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MM TCGA-EE-A2MN 
      103.17        16.96       204.62        96.23       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
      101.26        74.73        11.41        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.06         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  IL32 MUTATED IL32 WILD-TYPE 
         27.02           0.20 
  IL32 MUTATED IL32 WILD-TYPE 
        203.01         345.96 
  IL32 MUTATED IL32 WILD-TYPE 
        140.60          47.38 
[1] "27.0 - 203.0 (140.6)" "0.2 - 346.0 (47.4)"  
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" "IL32 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
  "IL32 MUTATED" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" "IL32 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "IL32 MUTATED" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" "IL32 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
  "IL32 MUTATED" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" "IL32 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "IL32 MUTATED" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" "IL32 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
  "IL32 MUTATED" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" "IL32 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE"   "IL32 MUTATED" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "IL32 MUTATED" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"IL32 WILD-TYPE" "IL32 WILD-TYPE" "IL32 WILD-TYPE" 
[1] "hr=" "5.2"
D35V2, continuous
D35V3, binary
                cls
clus              0  1
  IL32 MUTATED    3  3
  IL32 WILD-TYPE 54 86
[1] "tbl2"
                cls
clus             [,1] [,2]
  IL32 MUTATED      3    3
  IL32 WILD-TYPE   54   86
        clus
vv       IL32 MUTATED IL32 WILD-TYPE
  FEMALE            3             54
  MALE              3             86
                vv
clus              M0  M1 M1A M1B M1C
  IL32 MUTATED     6   0   0   0   0
  IL32 WILD-TYPE 118   2   1   1   2
D35V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  IL32 MUTATED    6  0   0   0   0   0   0  0  0
  IL32 WILD-TYPE 75  2   7  12   3   9   5 10  2
D35V5, multiclass
D35V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  IL32 MUTATED         0        0        0        5         0         1
  IL32 WILD-TYPE      17        9       11       13         7         7
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  IL32 MUTATED           0         0          0          0          0        0
  IL32 WILD-TYPE         7         5          6         16         16        4
D35V7, multiclass

Clustering(36) Variable = LUZP2 MUTATION ANALYSIS
D36V1, survival
                 sevent
clus2              0  1
  LUZP2 MUTATED    6  6
  LUZP2 WILD-TYPE 66 65
  LUZP2 MUTATED LUZP2 WILD-TYPE 
             12             131 
  LUZP2 MUTATED LUZP2 WILD-TYPE 
              6              65 
$`LUZP2 MUTATED`
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29M TCGA-EE-A2A2 TCGA-EE-A2GC TCGA-EE-A2GD 
       47.84        13.97        44.35        24.43        43.23       314.53 
TCGA-EE-A2GM TCGA-EE-A2MI TCGA-FS-A1ZA TCGA-FS-A1ZJ TCGA-FS-A1ZZ TCGA-GN-A266 
       75.48       204.62        27.68        47.38        27.02        10.09 

$`LUZP2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       39.62        32.19         2.56        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GH 
       78.94        39.25        58.75        47.54       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO 
       22.55        89.33        54.71        55.00        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.17        16.96        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB 
      228.59       202.62        20.91        28.08         7.76        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK 
       53.52        40.27        15.45         9.70        32.71        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       49.48        27.06         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        64.41        62.76        32.48        39.58 

  LUZP2 MUTATED LUZP2 WILD-TYPE 
          10.09            0.20 
  LUZP2 MUTATED LUZP2 WILD-TYPE 
         314.53          345.96 
  LUZP2 MUTATED LUZP2 WILD-TYPE 
          43.79           48.85 
[1] "10.1 - 314.5 (43.8)" "0.2 - 346.0 (48.9)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "LUZP2 MUTATED"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "LUZP2 MUTATED"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE"   "LUZP2 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "LUZP2 MUTATED"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "LUZP2 MUTATED"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE"   "LUZP2 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "LUZP2 MUTATED"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "LUZP2 MUTATED"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE"   "LUZP2 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "LUZP2 MUTATED" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE"   "LUZP2 MUTATED" "LUZP2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" "LUZP2 WILD-TYPE" 
[1] "hr=" "1.1"
D36V2, continuous
D36V3, binary
                 cls
clus               0  1
  LUZP2 MUTATED    6  7
  LUZP2 WILD-TYPE 51 82
[1] "tbl2"
                 cls
clus              [,1] [,2]
  LUZP2 MUTATED      6    7
  LUZP2 WILD-TYPE   51   82
        clus
vv       LUZP2 MUTATED LUZP2 WILD-TYPE
  FEMALE             6              51
  MALE               7              82
                 vv
clus               M0  M1 M1A M1B M1C
  LUZP2 MUTATED    11   0   0   0   0
  LUZP2 WILD-TYPE 113   2   1   1   2
D36V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  LUZP2 MUTATED    8  0   0   2   0   0   1  0  0
  LUZP2 WILD-TYPE 73  2   7  10   3   9   4 10  2
D36V5, multiclass
D36V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  LUZP2 MUTATED         1        0        2        0         0         4
  LUZP2 WILD-TYPE      16        9        9       18         7         4
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  LUZP2 MUTATED           1         0          0          2          1        0
  LUZP2 WILD-TYPE         6         5          6         14         15        4
D36V7, multiclass

Clustering(37) Variable = PDE1A MUTATION ANALYSIS
D37V1, survival
                 sevent
clus2              0  1
  PDE1A MUTATED   10 12
  PDE1A WILD-TYPE 62 59
  PDE1A MUTATED PDE1A WILD-TYPE 
             22             121 
  PDE1A MUTATED PDE1A WILD-TYPE 
             12              59 
$`PDE1A MUTATED`
TCGA-DA-A1IC TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29E 
       68.09        33.73        14.70       168.26        13.97        39.62 
TCGA-EE-A29M TCGA-EE-A29S TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2GC TCGA-EE-A2GE 
       44.35        55.89        46.82        24.43        43.23       135.91 
TCGA-EE-A2GH TCGA-EE-A2GS TCGA-EE-A2M5 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2MR 
      182.01        55.59        21.67        19.76        47.28       103.56 
TCGA-EE-A2MT TCGA-EE-A3AF TCGA-ER-A19F TCGA-FS-A1Z3 
       41.59        13.81        26.37        20.91 

$`PDE1A WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       53.92        65.92        23.44        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       15.68        29.82         8.65        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N 
       78.87        63.32        47.84        32.19         2.56        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       56.42        37.35        14.47       345.96        25.87        17.92 
TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GI 
       78.94        39.25        58.75        47.54       314.53        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 
       13.87        14.30        19.56        67.13       129.24        28.80 
TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       61.51       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
      136.44        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L 
       26.73        23.47       138.77        12.59         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
      202.62        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  PDE1A MUTATED PDE1A WILD-TYPE 
          13.81            0.20 
  PDE1A MUTATED PDE1A WILD-TYPE 
         182.01          345.96 
  PDE1A MUTATED PDE1A WILD-TYPE 
          42.41           48.89 
[1] "13.8 - 182.0 (42.4)" "0.2 - 346.0 (48.9)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "PDE1A MUTATED"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PDE1A WILD-TYPE"   "PDE1A MUTATED"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "PDE1A MUTATED" "PDE1A WILD-TYPE"   "PDE1A MUTATED"   "PDE1A MUTATED" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE"   "PDE1A MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "PDE1A MUTATED"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PDE1A WILD-TYPE"   "PDE1A MUTATED"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "PDE1A MUTATED" "PDE1A WILD-TYPE"   "PDE1A MUTATED"   "PDE1A MUTATED" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE"   "PDE1A MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "PDE1A MUTATED"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PDE1A WILD-TYPE"   "PDE1A MUTATED"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "PDE1A MUTATED" "PDE1A WILD-TYPE"   "PDE1A MUTATED"   "PDE1A MUTATED" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE"   "PDE1A MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE"   "PDE1A MUTATED" "PDE1A WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "PDE1A MUTATED" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PDE1A WILD-TYPE" "PDE1A WILD-TYPE" "PDE1A WILD-TYPE" 
[1] "hr=" "1.4"
D37V2, continuous
D37V3, binary
                 cls
clus               0  1
  PDE1A MUTATED    8 15
  PDE1A WILD-TYPE 49 74
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PDE1A MUTATED      8   15
  PDE1A WILD-TYPE   49   74
        clus
vv       PDE1A MUTATED PDE1A WILD-TYPE
  FEMALE             8              49
  MALE              15              74
                 vv
clus               M0  M1 M1A M1B M1C
  PDE1A MUTATED    20   0   0   0   0
  PDE1A WILD-TYPE 104   2   1   1   2
D37V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  PDE1A MUTATED   14  1   0   4   0   0   1  0  0
  PDE1A WILD-TYPE 67  1   7   8   3   9   4 10  2
D37V5, multiclass
D37V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PDE1A MUTATED         5        0        3        2         2         1
  PDE1A WILD-TYPE      12        9        8       16         5         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  PDE1A MUTATED           0         1          0          3          2        0
  PDE1A WILD-TYPE         7         4          6         13         14        4
D37V7, multiclass

Clustering(38) Variable = RBM11 MUTATION ANALYSIS
D38V1, survival
                 sevent
clus2              0  1
  RBM11 MUTATED    6  4
  RBM11 WILD-TYPE 66 67
  RBM11 MUTATED RBM11 WILD-TYPE 
             10             133 
  RBM11 MUTATED RBM11 WILD-TYPE 
              4              67 
$`RBM11 MUTATED`
TCGA-DA-A1I5 TCGA-EE-A181 TCGA-EE-A29H TCGA-EE-A29S TCGA-EE-A2M5 TCGA-EE-A2MC 
      107.34        33.73        32.19        55.89        21.67        61.51 
TCGA-EE-A2MD TCGA-EE-A2MR TCGA-FS-A1ZM TCGA-FS-A1ZW 
       47.28       103.56       101.26        49.48 

$`RBM11 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       194.83       176.55        35.93        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       39.62         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       14.47       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       24.43        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2ME 
       19.56        67.13       129.24        28.80        19.76       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT 
      167.87        47.54       248.61        43.23       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       47.38        23.93        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       26.56        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  RBM11 MUTATED RBM11 WILD-TYPE 
          21.67            0.20 
  RBM11 MUTATED RBM11 WILD-TYPE 
         107.34          345.96 
  RBM11 MUTATED RBM11 WILD-TYPE 
         52.685          47.540 
[1] "21.7 - 107.3 (52.7)" "0.2 - 346.0 (47.5)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE"   "RBM11 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE"   "RBM11 MUTATED" "RBM11 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
  "RBM11 MUTATED"   "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"RBM11 WILD-TYPE"   "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE"   "RBM11 MUTATED" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE"   "RBM11 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE"   "RBM11 MUTATED" "RBM11 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
  "RBM11 MUTATED"   "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"RBM11 WILD-TYPE"   "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE"   "RBM11 MUTATED" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE"   "RBM11 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE"   "RBM11 MUTATED" "RBM11 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
  "RBM11 MUTATED"   "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"RBM11 WILD-TYPE"   "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "RBM11 MUTATED" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE"   "RBM11 MUTATED" "RBM11 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"RBM11 WILD-TYPE" "RBM11 WILD-TYPE" "RBM11 WILD-TYPE" 
[1] "hr=" "1.2"
D38V2, continuous
D38V3, binary
                 cls
clus               0  1
  RBM11 MUTATED    3  7
  RBM11 WILD-TYPE 54 82
[1] "tbl2"
                 cls
clus              [,1] [,2]
  RBM11 MUTATED      3    7
  RBM11 WILD-TYPE   54   82
        clus
vv       RBM11 MUTATED RBM11 WILD-TYPE
  FEMALE             3              54
  MALE               7              82
                 vv
clus               M0  M1 M1A M1B M1C
  RBM11 MUTATED     9   0   0   0   1
  RBM11 WILD-TYPE 115   2   1   1   1
D38V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  RBM11 MUTATED    8  0   1   0   0   0   1  0  0
  RBM11 WILD-TYPE 73  2   6  12   3   9   4 10  2
D38V5, multiclass
D38V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  RBM11 MUTATED         3        1        0        2         1         0
  RBM11 WILD-TYPE      14        8       11       16         6         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  RBM11 MUTATED           0         1          0          1          0        1
  RBM11 WILD-TYPE         7         4          6         15         16        3
D38V7, multiclass

Clustering(39) Variable = GLRB MUTATION ANALYSIS
D39V1, survival
                sevent
clus2             0  1
  GLRB MUTATED    5 10
  GLRB WILD-TYPE 67 61
  GLRB MUTATED GLRB WILD-TYPE 
            15            128 
  GLRB MUTATED GLRB WILD-TYPE 
            10             61 
$`GLRB MUTATED`
TCGA-EE-A182 TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A2GD 
       14.70       168.26        13.97        39.62         2.56       314.53 
TCGA-EE-A2GP TCGA-EE-A2MD TCGA-EE-A2MS TCGA-EE-A3AE TCGA-ER-A19D TCGA-FS-A1YW 
       13.87        47.28       136.44        26.73        12.59       216.92 
TCGA-FS-A1ZE TCGA-FS-A1ZU TCGA-FS-A1ZZ 
       40.27        26.56        27.02 

$`GLRB WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 
      215.44        15.68        29.82         8.65        33.73        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H 
        4.93       109.64        78.87        63.32        47.84        32.19 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GH 
       39.25        58.75        47.54        43.23       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
      101.95        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
      129.24        28.80        19.76        61.51       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU 
       47.54       248.61        43.23       103.56        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24       122.73        25.84         3.68        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
      138.77        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
       80.32        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG 
        7.76        27.68        48.85        53.52        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 
      148.77        53.16        49.48        27.06         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  GLRB MUTATED GLRB WILD-TYPE 
          2.56           0.20 
  GLRB MUTATED GLRB WILD-TYPE 
        314.53         345.96 
  GLRB MUTATED GLRB WILD-TYPE 
         27.02          48.87 
[1] "2.6 - 314.5 (27.0)" "0.2 - 346.0 (48.9)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"GLRB WILD-TYPE"   "GLRB MUTATED"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
  "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"GLRB WILD-TYPE"   "GLRB MUTATED"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
  "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"GLRB WILD-TYPE"   "GLRB MUTATED"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
  "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"GLRB WILD-TYPE" "GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"GLRB WILD-TYPE"   "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "GLRB MUTATED" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"GLRB WILD-TYPE" "GLRB WILD-TYPE" "GLRB WILD-TYPE" 
[1] "hr=" "1.4"
D39V2, continuous
D39V3, binary
                cls
clus              0  1
  GLRB MUTATED    6 10
  GLRB WILD-TYPE 51 79
[1] "tbl2"
                cls
clus             [,1] [,2]
  GLRB MUTATED      6   10
  GLRB WILD-TYPE   51   79
        clus
vv       GLRB MUTATED GLRB WILD-TYPE
  FEMALE            6             51
  MALE             10             79
                vv
clus              M0  M1 M1A M1B M1C
  GLRB MUTATED    15   0   0   0   0
  GLRB WILD-TYPE 109   2   1   1   2
D39V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  GLRB MUTATED   10  0   1   3   0   0   0  1  0
  GLRB WILD-TYPE 71  2   6   9   3   9   5  9  2
D39V5, multiclass
D39V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  GLRB MUTATED         1        1        2        2         0         2
  GLRB WILD-TYPE      16        8        9       16         7         6
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  GLRB MUTATED           2         0          0          2          3        0
  GLRB WILD-TYPE         5         5          6         14         13        4
D39V7, multiclass

Clustering(40) Variable = PRB1 MUTATION ANALYSIS
D40V1, survival
                sevent
clus2             0  1
  PRB1 MUTATED    5  7
  PRB1 WILD-TYPE 67 64
  PRB1 MUTATED PRB1 WILD-TYPE 
            12            131 
  PRB1 MUTATED PRB1 WILD-TYPE 
             7             64 
$`PRB1 MUTATED`
TCGA-DA-A3F8 TCGA-EE-A29D TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2GJ TCGA-EE-A2GO 
       15.68        13.97        25.87        46.82        89.33       101.95 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A3AA TCGA-ER-A1A1 TCGA-FS-A1Z7 TCGA-GN-A266 
      204.62        96.23         4.24        79.99         7.76        10.09 

$`PRB1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
      215.44        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A1 
       37.35        14.47        55.89       345.96        17.92        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       24.43        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      135.91       182.01        22.55        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
       90.94        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.27       103.17        16.96       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
       53.26       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       44.05        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       20.91        28.08        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       27.06        27.02         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        64.41        62.76        32.48        39.58 

  PRB1 MUTATED PRB1 WILD-TYPE 
          4.24           0.20 
  PRB1 MUTATED PRB1 WILD-TYPE 
        204.62         345.96 
  PRB1 MUTATED PRB1 WILD-TYPE 
        36.345         47.840 
[1] "4.2 - 204.6 (36.3)" "0.2 - 346.0 (47.8)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "PRB1 MUTATED" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRB1 WILD-TYPE"   "PRB1 MUTATED"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "PRB1 MUTATED" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRB1 WILD-TYPE"   "PRB1 MUTATED"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "PRB1 MUTATED" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRB1 WILD-TYPE"   "PRB1 MUTATED"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE"   "PRB1 MUTATED" "PRB1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRB1 WILD-TYPE" "PRB1 WILD-TYPE" "PRB1 WILD-TYPE" 
[1] "hr=" "1.4"
D40V2, continuous
D40V3, binary
                cls
clus              0  1
  PRB1 MUTATED    2 10
  PRB1 WILD-TYPE 55 79
[1] "tbl2"
                cls
clus             [,1] [,2]
  PRB1 MUTATED      2   10
  PRB1 WILD-TYPE   55   79
        clus
vv       PRB1 MUTATED PRB1 WILD-TYPE
  FEMALE            2             55
  MALE             10             79
                vv
clus              M0  M1 M1A M1B M1C
  PRB1 MUTATED    10   0   0   0   0
  PRB1 WILD-TYPE 114   2   1   1   2
D40V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  PRB1 MUTATED    5  0   0   3   0   1   0  1  0
  PRB1 WILD-TYPE 76  2   7   9   3   8   5  9  2
D40V5, multiclass
D40V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PRB1 MUTATED         0        1        0        2         1         1
  PRB1 WILD-TYPE      17        8       11       16         6         7
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  PRB1 MUTATED           0         0          0          1          4        0
  PRB1 WILD-TYPE         7         5          6         15         12        4
D40V7, multiclass

Clustering(41) Variable = KIAA1257 MUTATION ANALYSIS
D41V1, survival
                    sevent
clus2                 0  1
  KIAA1257 MUTATED    2  4
  KIAA1257 WILD-TYPE 70 67
  KIAA1257 MUTATED KIAA1257 WILD-TYPE 
                 6                137 
  KIAA1257 MUTATED KIAA1257 WILD-TYPE 
                 4                 67 
$`KIAA1257 MUTATED`
TCGA-EE-A29L TCGA-EE-A2GP TCGA-EE-A2M6 TCGA-EE-A2MJ TCGA-EE-A3AA TCGA-FS-A1Z3 
        2.56        13.87       129.24        96.23         4.24        20.91 

$`KIAA1257 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N 
       47.84        13.97        39.62        32.19        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13        21.67        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
      204.62       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
       43.23       103.56       136.44        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 
       80.32       216.92        48.59       228.59       202.62        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  KIAA1257 MUTATED KIAA1257 WILD-TYPE 
              2.56               0.20 
  KIAA1257 MUTATED KIAA1257 WILD-TYPE 
            129.24             345.96 
  KIAA1257 MUTATED KIAA1257 WILD-TYPE 
             17.39              47.84 
[1] "2.6 - 129.2 (17.4)" "0.2 - 346.0 (47.8)"
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
  "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
  "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
  "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"KIAA1257 WILD-TYPE"   "KIAA1257 MUTATED" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"KIAA1257 WILD-TYPE" "KIAA1257 WILD-TYPE" 
[1] "hr=" "2.3"
D41V2, continuous
D41V3, binary
                    cls
clus                  0  1
  KIAA1257 MUTATED    1  6
  KIAA1257 WILD-TYPE 56 83
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  KIAA1257 MUTATED      1    6
  KIAA1257 WILD-TYPE   56   83
        clus
vv       KIAA1257 MUTATED KIAA1257 WILD-TYPE
  FEMALE                1                 56
  MALE                  6                 83
                    vv
clus                  M0  M1 M1A M1B M1C
  KIAA1257 MUTATED     4   0   0   0   0
  KIAA1257 WILD-TYPE 120   2   1   1   2
D41V4, multiclass
                    vv
clus                 N0 N1 N1A N1B N2A N2B N2C N3 NX
  KIAA1257 MUTATED    2  0   1   0   0   0   0  1  0
  KIAA1257 WILD-TYPE 79  2   6  12   3   9   5  9  2
D41V5, multiclass
D41V6, continuous
                    vv
clus                 STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  KIAA1257 MUTATED         1        0        0        1         0         0
  KIAA1257 WILD-TYPE      16        9       11       17         7         8
                    vv
clus                 STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  KIAA1257 MUTATED           0         0          0          1          1
  KIAA1257 WILD-TYPE         7         5          6         15         15
                    vv
clus                 STAGE IV
  KIAA1257 MUTATED          0
  KIAA1257 WILD-TYPE        4
D41V7, multiclass

Clustering(42) Variable = USP17L2 MUTATION ANALYSIS
D42V1, survival
                   sevent
clus2                0  1
  USP17L2 MUTATED    6  7
  USP17L2 WILD-TYPE 66 64
  USP17L2 MUTATED USP17L2 WILD-TYPE 
               13               130 
  USP17L2 MUTATED USP17L2 WILD-TYPE 
                7                64 
$`USP17L2 MUTATED`
TCGA-DA-A1I4 TCGA-EE-A181 TCGA-EE-A20B TCGA-EE-A29M TCGA-EE-A2A2 TCGA-EE-A2GI 
       35.93        33.73       109.64        44.35        24.43        22.55 
TCGA-EE-A2MJ TCGA-EE-A2MR TCGA-EE-A2MU TCGA-EE-A3AH TCGA-FS-A1ZB TCGA-FS-A1ZD 
       96.23       103.56        53.26       138.77        48.85        53.52 
TCGA-GN-A266 
       10.09 

$`USP17L2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       194.83       176.55       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       78.87       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
       32.19         2.56        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       39.25        58.75        47.54        43.23       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
      101.95        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML 
      103.27       103.17        16.96       204.62       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT 
      167.87        47.54       248.61        43.23       136.44        41.59 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
       23.47        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZE TCGA-FS-A1ZF 
       20.91        28.08         7.76        27.68        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  USP17L2 MUTATED USP17L2 WILD-TYPE 
            10.09              0.20 
  USP17L2 MUTATED USP17L2 WILD-TYPE 
           138.77            345.96 
  USP17L2 MUTATED USP17L2 WILD-TYPE 
            48.85             47.54 
[1] "10.1 - 138.8 (48.9)" "0.2 - 346.0 (47.5)" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE"   "USP17L2 MUTATED" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
  "USP17L2 MUTATED"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE"   "USP17L2 MUTATED" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
  "USP17L2 MUTATED"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE"   "USP17L2 MUTATED" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
  "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
  "USP17L2 MUTATED"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE"   "USP17L2 MUTATED" "USP17L2 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" "USP17L2 WILD-TYPE" 
[1] "hr=" "1.2"
D42V2, continuous
D42V3, binary
                   cls
clus                 0  1
  USP17L2 MUTATED    3 10
  USP17L2 WILD-TYPE 54 79
[1] "tbl2"
                   cls
clus                [,1] [,2]
  USP17L2 MUTATED      3   10
  USP17L2 WILD-TYPE   54   79
        clus
vv       USP17L2 MUTATED USP17L2 WILD-TYPE
  FEMALE               3                54
  MALE                10                79
                   vv
clus                 M0  M1 M1A M1B M1C
  USP17L2 MUTATED    12   0   0   0   0
  USP17L2 WILD-TYPE 112   2   1   1   2
D42V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  USP17L2 MUTATED   10  0   0   1   0   1   0  0  0
  USP17L2 WILD-TYPE 71  2   7  11   3   8   5 10  2
D42V5, multiclass
D42V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  USP17L2 MUTATED         1        2        1        5         1         0
  USP17L2 WILD-TYPE      16        7       10       13         6         8
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  USP17L2 MUTATED           0         0          0          2          0
  USP17L2 WILD-TYPE         7         5          6         14         16
                   vv
clus                STAGE IV
  USP17L2 MUTATED          0
  USP17L2 WILD-TYPE        4
D42V7, multiclass

Clustering(43) Variable = SPAG16 MUTATION ANALYSIS
D43V1, survival
                  sevent
clus2               0  1
  SPAG16 MUTATED    5  8
  SPAG16 WILD-TYPE 67 63
  SPAG16 MUTATED SPAG16 WILD-TYPE 
              13              130 
  SPAG16 MUTATED SPAG16 WILD-TYPE 
               8               63 
$`SPAG16 MUTATED`
TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A29X TCGA-EE-A2A5 TCGA-EE-A2GO TCGA-EE-A2M5 
       39.62        18.58        17.92        39.25       101.95        21.67 
TCGA-EE-A2MI TCGA-EE-A2MS TCGA-EE-A3AD TCGA-FS-A1Z7 TCGA-FS-A1ZW TCGA-FS-A1ZZ 
      204.62       136.44         3.68         7.76        49.48        27.02 
TCGA-GN-A266 
       10.09 

$`SPAG16 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P 
       47.84        13.97        32.19         2.56        44.35        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A0 
       37.35        14.47        55.89       345.96        25.87        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       78.94        24.43        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       75.48        90.94        13.87        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       67.13       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.27       103.17        16.96        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT 
      167.87        47.54       248.61        43.23       103.56        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF 
       53.26         4.24       122.73        25.84        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
      202.62        20.91        28.08        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.06         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  SPAG16 MUTATED SPAG16 WILD-TYPE 
            3.68             0.20 
  SPAG16 MUTATED SPAG16 WILD-TYPE 
          204.62           345.96 
  SPAG16 MUTATED SPAG16 WILD-TYPE 
           27.02            48.72 
[1] "3.7 - 204.6 (27.0)" "0.2 - 346.0 (48.7)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
  "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
  "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
  "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "SPAG16 MUTATED" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE"   "SPAG16 MUTATED" "SPAG16 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" "SPAG16 WILD-TYPE" 
[1] "hr=" "1.7"
D43V2, continuous
D43V3, binary
                  cls
clus                0  1
  SPAG16 MUTATED    3 10
  SPAG16 WILD-TYPE 54 79
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SPAG16 MUTATED      3   10
  SPAG16 WILD-TYPE   54   79
        clus
vv       SPAG16 MUTATED SPAG16 WILD-TYPE
  FEMALE              3               54
  MALE               10               79
                  vv
clus                M0  M1 M1A M1B M1C
  SPAG16 MUTATED    11   0   0   0   0
  SPAG16 WILD-TYPE 113   2   1   1   2
D43V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  SPAG16 MUTATED    8  0   1   2   0   0   0  0  0
  SPAG16 WILD-TYPE 73  2   6  10   3   9   5 10  2
D43V5, multiclass
D43V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  SPAG16 MUTATED         1        0        2        2         0         2
  SPAG16 WILD-TYPE      16        9        9       16         7         6
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  SPAG16 MUTATED           0         0          0          2          1
  SPAG16 WILD-TYPE         7         5          6         14         15
                  vv
clus               STAGE IV
  SPAG16 MUTATED          0
  SPAG16 WILD-TYPE        4
D43V7, multiclass

Clustering(44) Variable = OR4M2 MUTATION ANALYSIS
D44V1, survival
                 sevent
clus2              0  1
  OR4M2 MUTATED   10  7
  OR4M2 WILD-TYPE 62 64
  OR4M2 MUTATED OR4M2 WILD-TYPE 
             17             126 
  OR4M2 MUTATED OR4M2 WILD-TYPE 
              7              64 
$`OR4M2 MUTATED`
TCGA-DA-A1HV TCGA-DA-A1I5 TCGA-EE-A181 TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M 
       48.89       107.34        33.73        39.62         2.56        44.35 
TCGA-EE-A29S TCGA-EE-A2A0 TCGA-EE-A2GC TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2M5 
       55.89        46.82        43.23        90.94        13.87        21.67 
TCGA-EE-A2MM TCGA-EE-A2MS TCGA-EE-A3AD TCGA-FS-A1ZS TCGA-FS-A1ZZ 
      167.87       136.44         3.68       148.77        27.02 

$`OR4M2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      194.83       176.55        35.93        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H 
       78.87       168.26        63.32        47.84        13.97        32.19 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V 
       18.58        56.42        37.35        14.47       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       17.92        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        75.48       101.95        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       67.13       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT 
      203.01        47.54       248.61        43.23       103.56        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF 
       53.26         4.24       122.73        25.84        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZT TCGA-FS-A1ZU 
       23.93       101.26        74.73        11.41        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       49.48        27.06         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        62.76        32.48        39.58 

  OR4M2 MUTATED OR4M2 WILD-TYPE 
           2.56            0.20 
  OR4M2 MUTATED OR4M2 WILD-TYPE 
         167.87          345.96 
  OR4M2 MUTATED OR4M2 WILD-TYPE 
         44.350          48.215 
[1] "2.6 - 167.9 (44.4)" "0.2 - 346.0 (48.2)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "OR4M2 MUTATED"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "OR4M2 MUTATED"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "OR4M2 MUTATED"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" "OR4M2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE"   "OR4M2 MUTATED" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "OR4M2 MUTATED" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" "OR4M2 WILD-TYPE" 
[1] "hr=" "1.1"
D44V2, continuous
D44V3, binary
                 cls
clus               0  1
  OR4M2 MUTATED    7 10
  OR4M2 WILD-TYPE 50 79
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4M2 MUTATED      7   10
  OR4M2 WILD-TYPE   50   79
        clus
vv       OR4M2 MUTATED OR4M2 WILD-TYPE
  FEMALE             7              50
  MALE              10              79
                 vv
clus               M0  M1 M1A M1B M1C
  OR4M2 MUTATED    15   0   0   0   1
  OR4M2 WILD-TYPE 109   2   1   1   1
D44V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  OR4M2 MUTATED   12  0   1   1   0   1   0  1  0
  OR4M2 WILD-TYPE 69  2   6  11   3   8   5  9  2
D44V5, multiclass
D44V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OR4M2 MUTATED         2        0        1        3         3         2
  OR4M2 WILD-TYPE      15        9       10       15         4         6
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  OR4M2 MUTATED           0         0          0          3          1        1
  OR4M2 WILD-TYPE         7         5          6         13         15        3
D44V7, multiclass

Clustering(45) Variable = GFRAL MUTATION ANALYSIS
D45V1, survival
                 sevent
clus2              0  1
  GFRAL MUTATED    7 11
  GFRAL WILD-TYPE 65 60
  GFRAL MUTATED GFRAL WILD-TYPE 
             18             125 
  GFRAL MUTATED GFRAL WILD-TYPE 
             11              60 
$`GFRAL MUTATED`
TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29L TCGA-EE-A29Q 
       33.73        26.86        47.84        13.97         2.56        37.35 
TCGA-EE-A2GM TCGA-EE-A2GR TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A3AA TCGA-EE-A3AH 
       75.48        14.30       103.17       204.62         4.24       138.77 
TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1ZA TCGA-FS-A1ZE TCGA-FS-A1ZM TCGA-GN-A268 
      228.59        20.91        27.68        40.27       101.26        62.76 

$`GFRAL WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A185 
      215.44        15.68        29.82         8.65        14.70         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29E TCGA-EE-A29H 
      109.64        78.87       168.26        63.32        39.62        32.19 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       44.35        18.58        56.42        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO 
       22.55        89.33        54.71        55.00        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MH 
       28.80        19.76        61.51        47.28       103.27        16.96 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
       43.23       103.56       136.44        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D 
       25.84         3.68        26.73        13.81        23.47        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB 
      216.92        48.59       202.62        28.08         7.76        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       53.52        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       27.06        27.02         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        32.48        39.58 

  GFRAL MUTATED GFRAL WILD-TYPE 
           2.56            0.20 
  GFRAL MUTATED GFRAL WILD-TYPE 
         228.59          345.96 
  GFRAL MUTATED GFRAL WILD-TYPE 
          38.81           48.59 
[1] "2.6 - 228.6 (38.8)" "0.2 - 346.0 (48.6)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "GFRAL MUTATED" "GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "GFRAL MUTATED"   "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "GFRAL MUTATED" "GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "GFRAL MUTATED"   "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "GFRAL MUTATED" "GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "GFRAL MUTATED"   "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE"   "GFRAL MUTATED" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
  "GFRAL MUTATED" "GFRAL WILD-TYPE" "GFRAL WILD-TYPE" 
[1] "hr=" "1.2"
D45V2, continuous
D45V3, binary
                 cls
clus               0  1
  GFRAL MUTATED    7 13
  GFRAL WILD-TYPE 50 76
[1] "tbl2"
                 cls
clus              [,1] [,2]
  GFRAL MUTATED      7   13
  GFRAL WILD-TYPE   50   76
        clus
vv       GFRAL MUTATED GFRAL WILD-TYPE
  FEMALE             7              50
  MALE              13              76
                 vv
clus               M0  M1 M1A M1B M1C
  GFRAL MUTATED    16   0   0   0   0
  GFRAL WILD-TYPE 108   2   1   1   2
D45V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  GFRAL MUTATED   12  0   0   1   0   0   2  1  0
  GFRAL WILD-TYPE 69  2   7  11   3   9   3  9  2
D45V5, multiclass
D45V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  GFRAL MUTATED         2        0        1        3         1         3
  GFRAL WILD-TYPE      15        9       10       15         6         5
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  GFRAL MUTATED           2         1          0          1          2        0
  GFRAL WILD-TYPE         5         4          6         15         14        4
D45V7, multiclass

Clustering(46) Variable = UNC119B MUTATION ANALYSIS
D46V1, survival
                   sevent
clus2                0  1
  UNC119B MUTATED    1  2
  UNC119B WILD-TYPE 71 69
  UNC119B MUTATED UNC119B WILD-TYPE 
                3               140 
  UNC119B MUTATED UNC119B WILD-TYPE 
                2                69 
$`UNC119B MUTATED`
TCGA-EE-A2M5 TCGA-EE-A2MJ TCGA-EE-A2MK 
       21.67        96.23       144.76 

$`UNC119B WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       47.84        13.97        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
      101.95        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      103.17        16.96       204.62       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  UNC119B MUTATED UNC119B WILD-TYPE 
            21.67              0.20 
  UNC119B MUTATED UNC119B WILD-TYPE 
           144.76            345.96 
  UNC119B MUTATED UNC119B WILD-TYPE 
            96.23             47.54 
[1] "21.7 - 144.8 (96.2)" "0.2 - 346.0 (47.5)" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "UNC119B MUTATED" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE"   "UNC119B MUTATED"   "UNC119B MUTATED" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "UNC119B MUTATED" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE"   "UNC119B MUTATED"   "UNC119B MUTATED" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "UNC119B MUTATED" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE"   "UNC119B MUTATED"   "UNC119B MUTATED" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"UNC119B WILD-TYPE" "UNC119B WILD-TYPE" "UNC119B WILD-TYPE" 
[1] "hr=" "1.1"
D46V2, continuous
D46V3, binary
                   cls
clus                 0  1
  UNC119B MUTATED    1  2
  UNC119B WILD-TYPE 56 87
[1] "tbl2"
                   cls
clus                [,1] [,2]
  UNC119B MUTATED      1    2
  UNC119B WILD-TYPE   56   87
        clus
vv       UNC119B MUTATED UNC119B WILD-TYPE
  FEMALE               1                56
  MALE                 2                87
                   vv
clus                 M0  M1 M1A M1B M1C
  UNC119B MUTATED     3   0   0   0   0
  UNC119B WILD-TYPE 121   2   1   1   2
D46V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  UNC119B MUTATED    3  0   0   0   0   0   0  0  0
  UNC119B WILD-TYPE 78  2   7  12   3   9   5 10  2
D46V5, multiclass
D46V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  UNC119B MUTATED         1        0        0        2         0         0
  UNC119B WILD-TYPE      16        9       11       16         7         8
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  UNC119B MUTATED           0         0          0          0          0
  UNC119B WILD-TYPE         7         5          6         16         16
                   vv
clus                STAGE IV
  UNC119B MUTATED          0
  UNC119B WILD-TYPE        4
D46V7, multiclass

Clustering(47) Variable = PHGDH MUTATION ANALYSIS
D47V1, survival
                 sevent
clus2              0  1
  PHGDH MUTATED    3  2
  PHGDH WILD-TYPE 69 69
  PHGDH MUTATED PHGDH WILD-TYPE 
              5             138 
  PHGDH MUTATED PHGDH WILD-TYPE 
              2              69 
$`PHGDH MUTATED`
TCGA-EE-A2GT TCGA-EE-A2MI TCGA-EE-A3AG TCGA-ER-A19F TCGA-GN-A265 
       19.56       204.62        23.47        26.37        84.72 

$`PHGDH WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       47.84        13.97        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 
      101.95        13.87        14.30        55.59        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.17        16.96        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
       13.81       138.77        12.59         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        10.09        64.41        62.76        32.48        39.58 

  PHGDH MUTATED PHGDH WILD-TYPE 
          19.56            0.20 
  PHGDH MUTATED PHGDH WILD-TYPE 
         204.62          345.96 
  PHGDH MUTATED PHGDH WILD-TYPE 
          26.37           47.69 
[1] "19.6 - 204.6 (26.4)" "0.2 - 346.0 (47.7)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE"   "PHGDH MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE"   "PHGDH MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE"   "PHGDH MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PHGDH WILD-TYPE"   "PHGDH MUTATED" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
[1] "hr=" "1.3"
D47V2, continuous
D47V3, binary
                 cls
clus               0  1
  PHGDH MUTATED    0  5
  PHGDH WILD-TYPE 57 84
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PHGDH MUTATED      0    5
  PHGDH WILD-TYPE   57   84
        clus
vv       PHGDH MUTATED PHGDH WILD-TYPE
  FEMALE             0              57
  MALE               5              84
                 vv
clus               M0  M1 M1A M1B M1C
  PHGDH MUTATED     3   0   0   0   0
  PHGDH WILD-TYPE 121   2   1   1   2
D47V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  PHGDH MUTATED    3  0   0   0   0   0   0  0  0
  PHGDH WILD-TYPE 78  2   7  12   3   9   5 10  2
D47V5, multiclass
D47V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PHGDH MUTATED         0        0        0        0         1         1
  PHGDH WILD-TYPE      17        9       11       18         6         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  PHGDH MUTATED           0         0          0          0          0        0
  PHGDH WILD-TYPE         7         5          6         16         16        4
D47V7, multiclass
[1] "Remove cluster labels:" "PHGDH MUTATED"         
clus
  PHGDH MUTATED PHGDH WILD-TYPE 
              2             122 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29P      TCGA-EE-A29Q 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29V      TCGA-EE-A29X 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2A0      TCGA-EE-A2A1      TCGA-EE-A2A2      TCGA-EE-A2A5 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2A6      TCGA-EE-A2GB      TCGA-EE-A2GC      TCGA-EE-A2GD 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GE      TCGA-EE-A2GH      TCGA-EE-A2GI      TCGA-EE-A2GJ 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GK      TCGA-EE-A2GL      TCGA-EE-A2GM      TCGA-EE-A2GN 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GO      TCGA-EE-A2GP      TCGA-EE-A2GR      TCGA-EE-A2GS 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2GU      TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2M8      TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MG      TCGA-EE-A2MH      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AE      TCGA-EE-A3AH      TCGA-ER-A19D 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-ER-A19J      TCGA-ER-A19O      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA      TCGA-FS-A1ZB 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF      TCGA-FS-A1ZG 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK      TCGA-FS-A1ZM 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS      TCGA-FS-A1ZT 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY      TCGA-FS-A1ZZ 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A267      TCGA-GN-A268 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 
     TCGA-GN-A26A      TCGA-GN-A26D 
"PHGDH WILD-TYPE" "PHGDH WILD-TYPE" 

Clustering(48) Variable = STXBP5L MUTATION ANALYSIS
D48V1, survival
                   sevent
clus2                0  1
  STXBP5L MUTATED   13 18
  STXBP5L WILD-TYPE 59 53
  STXBP5L MUTATED STXBP5L WILD-TYPE 
               31               112 
  STXBP5L MUTATED STXBP5L WILD-TYPE 
               18                53 
$`STXBP5L MUTATED`
TCGA-D3-A3MV TCGA-DA-A1HV TCGA-DA-A1IC TCGA-DA-A3F8 TCGA-EE-A181 TCGA-EE-A20F 
       21.47        48.89        68.09        15.68        33.73        78.87 
TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A2GP 
       13.97        32.19        44.35        14.47        55.89        13.87 
TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MR 
       21.67        61.51        47.28       204.62        96.23       103.56 
TCGA-EE-A2MS TCGA-EE-A3AA TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
      136.44         4.24        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A1A1 TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1ZK TCGA-FS-A1ZZ 
       26.37        79.99       202.62        20.91        23.93        27.02 
TCGA-GN-A266 
       10.09 

$`STXBP5L WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
        2.70         6.38        36.03       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A17Z 
       23.44        28.60        10.49       215.44        29.82         8.65 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A 
       14.70        26.86         4.93       109.64       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       47.84        39.62         2.56        18.58        56.42        37.35 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       39.25        58.75        47.54        43.23       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      182.01        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
       90.94       101.95        14.30        55.59        19.56        67.13 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
      129.24        28.80        19.76       103.27       103.17        16.96 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       41.59        53.26       122.73        25.84         3.68        26.73 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
        6.41       131.08        44.05        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
      228.59        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM 
       40.27        15.45         9.70        32.71        47.38       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.06         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  STXBP5L MUTATED STXBP5L WILD-TYPE 
             4.24              0.20 
  STXBP5L MUTATED STXBP5L WILD-TYPE 
           204.62            345.96 
  STXBP5L MUTATED STXBP5L WILD-TYPE 
           32.190            49.165 
[1] "4.2 - 204.6 (32.2)" "0.2 - 346.0 (49.2)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
  "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
  "STXBP5L MUTATED"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
  "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
  "STXBP5L MUTATED"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
  "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED"   "STXBP5L MUTATED" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
  "STXBP5L MUTATED"   "STXBP5L MUTATED"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "STXBP5L MUTATED" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE"   "STXBP5L MUTATED" "STXBP5L WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" "STXBP5L WILD-TYPE" 
[1] "hr=" "1.6"
D48V2, continuous
D48V3, binary
                   cls
clus                 0  1
  STXBP5L MUTATED   11 20
  STXBP5L WILD-TYPE 46 69
[1] "tbl2"
                   cls
clus                [,1] [,2]
  STXBP5L MUTATED     11   20
  STXBP5L WILD-TYPE   46   69
        clus
vv       STXBP5L MUTATED STXBP5L WILD-TYPE
  FEMALE              11                46
  MALE                20                69
                   vv
clus                M0 M1 M1A M1B M1C
  STXBP5L MUTATED   26  0   0   0   0
  STXBP5L WILD-TYPE 98  2   1   1   2
D48V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  STXBP5L MUTATED   18  0   1   2   1   2   1  1  0
  STXBP5L WILD-TYPE 63  2   6  10   2   7   4  9  2
D48V5, multiclass
D48V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  STXBP5L MUTATED         3        2        2        7         1         2
  STXBP5L WILD-TYPE      14        7        9       11         6         6
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  STXBP5L MUTATED           0         0          0          5          3
  STXBP5L WILD-TYPE         7         5          6         11         13
                   vv
clus                STAGE IV
  STXBP5L MUTATED          0
  STXBP5L WILD-TYPE        4
D48V7, multiclass

Clustering(49) Variable = TRAT1 MUTATION ANALYSIS
D49V1, survival
                 sevent
clus2              0  1
  TRAT1 MUTATED    3  7
  TRAT1 WILD-TYPE 69 64
  TRAT1 MUTATED TRAT1 WILD-TYPE 
             10             133 
  TRAT1 MUTATED TRAT1 WILD-TYPE 
              7              64 
$`TRAT1 MUTATED`
TCGA-DA-A1IC TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A29M TCGA-EE-A2MT TCGA-EE-A3AE 
       68.09        33.73        26.86        44.35        41.59        26.73 
TCGA-ER-A19F TCGA-FS-A1ZZ TCGA-GN-A266 TCGA-GN-A26A 
       26.37        27.02        10.09        32.48 

$`TRAT1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       53.92        65.92        23.44        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20B 
       15.68        29.82         8.65        14.70         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       78.87       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
       32.19         2.56        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       24.43        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
       43.23       103.56       136.44        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
       25.84         3.68        13.81        23.47       138.77        12.59 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 
      148.77        53.16        26.56        49.48        27.06         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        64.41        62.76 
TCGA-GN-A26D 
       39.58 

  TRAT1 MUTATED TRAT1 WILD-TYPE 
          10.09            0.20 
  TRAT1 MUTATED TRAT1 WILD-TYPE 
          68.09          345.96 
  TRAT1 MUTATED TRAT1 WILD-TYPE 
          29.75           48.89 
[1] "10.1 - 68.1 (29.8)" "0.2 - 346.0 (48.9)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "TRAT1 MUTATED" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "TRAT1 MUTATED" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "TRAT1 MUTATED" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "TRAT1 MUTATED" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"TRAT1 WILD-TYPE" "TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"TRAT1 WILD-TYPE"   "TRAT1 MUTATED" "TRAT1 WILD-TYPE" 
[1] "hr=" "2.6"
D49V2, continuous
D49V3, binary
                 cls
clus               0  1
  TRAT1 MUTATED    5  5
  TRAT1 WILD-TYPE 52 84
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TRAT1 MUTATED      5    5
  TRAT1 WILD-TYPE   52   84
        clus
vv       TRAT1 MUTATED TRAT1 WILD-TYPE
  FEMALE             5              52
  MALE               5              84
                 vv
clus               M0  M1 M1A M1B M1C
  TRAT1 MUTATED     9   0   0   0   0
  TRAT1 WILD-TYPE 115   2   1   1   2
D49V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  TRAT1 MUTATED    7  0   1   0   0   0   1  0  0
  TRAT1 WILD-TYPE 74  2   6  12   3   9   4 10  2
D49V5, multiclass
D49V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TRAT1 MUTATED         1        1        2        1         0         1
  TRAT1 WILD-TYPE      16        8        9       17         7         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  TRAT1 MUTATED           0         0          1          1          0        0
  TRAT1 WILD-TYPE         7         5          5         15         16        4
D49V7, multiclass

Clustering(50) Variable = ZNF844 MUTATION ANALYSIS
D50V1, survival
                  sevent
clus2               0  1
  ZNF844 MUTATED    3  1
  ZNF844 WILD-TYPE 69 70
  ZNF844 MUTATED ZNF844 WILD-TYPE 
               4              139 
  ZNF844 MUTATED ZNF844 WILD-TYPE 
               1               70 
$`ZNF844 MUTATED`
TCGA-DA-A1HV TCGA-EE-A29V TCGA-EE-A2MS TCGA-ER-A3ET 
       48.89        25.87       136.44        80.32 

$`ZNF844 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X 
       56.42        37.35        14.47        55.89       345.96        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       14.30        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU 
       47.54       248.61        43.23       103.56        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       44.05        79.99       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  ZNF844 MUTATED ZNF844 WILD-TYPE 
           25.87             0.20 
  ZNF844 MUTATED ZNF844 WILD-TYPE 
          136.44           345.96 
  ZNF844 MUTATED ZNF844 WILD-TYPE 
          64.605           47.540 
[1] "25.9 - 136.4 (64.6)" "0.2 - 346.0 (47.5)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZNF844 WILD-TYPE"   "ZNF844 MUTATED" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "ZNF844 MUTATED" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE"   "ZNF844 MUTATED" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE"   "ZNF844 MUTATED" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZNF844 WILD-TYPE"   "ZNF844 MUTATED" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "ZNF844 MUTATED" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE"   "ZNF844 MUTATED" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE"   "ZNF844 MUTATED" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZNF844 WILD-TYPE"   "ZNF844 MUTATED" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "ZNF844 MUTATED" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE"   "ZNF844 MUTATED" "ZNF844 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE"   "ZNF844 MUTATED" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" "ZNF844 WILD-TYPE" 
[1] "hr=" "2.2"
D50V2, continuous
D50V3, binary
                  cls
clus                0  1
  ZNF844 MUTATED    2  2
  ZNF844 WILD-TYPE 55 87
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ZNF844 MUTATED      2    2
  ZNF844 WILD-TYPE   55   87
        clus
vv       ZNF844 MUTATED ZNF844 WILD-TYPE
  FEMALE              2               55
  MALE                2               87
                  vv
clus                M0  M1 M1A M1B M1C
  ZNF844 MUTATED     4   0   0   0   0
  ZNF844 WILD-TYPE 120   2   1   1   2
D50V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  ZNF844 MUTATED    1  0   1   1   0   1   0  0  0
  ZNF844 WILD-TYPE 80  2   6  11   3   8   5 10  2
D50V5, multiclass
D50V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  ZNF844 MUTATED         0        0        0        1         0         0
  ZNF844 WILD-TYPE      17        9       11       17         7         8
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  ZNF844 MUTATED           0         0          1          1          1
  ZNF844 WILD-TYPE         7         5          5         15         15
                  vv
clus               STAGE IV
  ZNF844 MUTATED          0
  ZNF844 WILD-TYPE        4
D50V7, multiclass

Clustering(51) Variable = TTN MUTATION ANALYSIS
D51V1, survival
               sevent
clus2            0  1
  TTN MUTATED   60 51
  TTN WILD-TYPE 12 20
  TTN MUTATED TTN WILD-TYPE 
          111            32 
  TTN MUTATED TTN WILD-TYPE 
           51            20 
$`TTN MUTATED`
TCGA-D3-A3MV TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW 
       21.47        49.74         2.70         6.38        48.89        36.03 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
      117.17        20.38       194.83        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       53.92        65.92        68.09       215.44        15.68        29.82 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H 
       33.73        14.70        26.86         4.93        78.87       168.26 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
       63.32        47.84        13.97        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       25.87        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       89.33        54.71        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       14.30        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2MG TCGA-EE-A2MH 
       28.80        19.76        61.51        47.28       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24       122.73        25.84        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19N TCGA-ER-A1A1 
      138.77        12.59        26.37         6.41        44.05        79.99 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE 
      202.62        20.91         7.76        27.68        48.85        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       15.45        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZW TCGA-FS-A1ZZ TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       49.48        27.02       120.46        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

$`TTN WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-DA-A1I2 
      121.22        58.03        71.24         9.30       148.31       176.55 
TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17Z TCGA-EE-A20B TCGA-EE-A29T 
       23.44        28.60        10.49         8.65       109.64       345.96 
TCGA-EE-A29X TCGA-EE-A2GL TCGA-EE-A2ME TCGA-EE-A3AD TCGA-ER-A19L TCGA-ER-A3ET 
       17.92        55.00       103.27         3.68       131.08        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z4 TCGA-FS-A1ZD TCGA-FS-A1ZG 
      216.92        48.59       228.59        28.08        53.52         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FW-A3I3 
       32.71        47.38        53.16        26.56        27.06         0.20 
TCGA-GN-A261 TCGA-GN-A264 
       76.41       117.93 

  TTN MUTATED TTN WILD-TYPE 
         2.56          0.20 
  TTN MUTATED TTN WILD-TYPE 
       314.53        345.96 
  TTN MUTATED TTN WILD-TYPE 
        47.28         53.34 
[1] "2.6 - 314.5 (47.3)" "0.2 - 346.0 (53.3)"
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"TTN WILD-TYPE"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" "TTN WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
  "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
  "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
  "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"TTN WILD-TYPE"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" "TTN WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
  "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
  "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
  "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"TTN WILD-TYPE"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" "TTN WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
  "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
  "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"TTN WILD-TYPE" "TTN WILD-TYPE" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
  "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED" "TTN WILD-TYPE" "TTN WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
  "TTN MUTATED" "TTN WILD-TYPE"   "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
  "TTN MUTATED"   "TTN MUTATED"   "TTN MUTATED" 
[1] "hr=" "1.2"
D51V2, continuous
D51V3, binary
               cls
clus             0  1
  TTN MUTATED   40 74
  TTN WILD-TYPE 17 15
[1] "tbl2"
               cls
clus            [,1] [,2]
  TTN MUTATED     40   74
  TTN WILD-TYPE   17   15
        clus
vv       TTN MUTATED TTN WILD-TYPE
  FEMALE          40            17
  MALE            74            15
               vv
clus            M0 M1 M1A M1B M1C
  TTN MUTATED   98  1   1   0   1
  TTN WILD-TYPE 26  1   0   1   1
D51V4, multiclass
               vv
clus            N0 N1 N1A N1B N2A N2B N2C N3 NX
  TTN MUTATED   64  1   6  11   3   4   3  9  1
  TTN WILD-TYPE 17  1   1   1   0   5   2  1  1
D51V5, multiclass
D51V6, continuous
               vv
clus            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TTN MUTATED        13        9        7       17         4         6
  TTN WILD-TYPE       4        0        4        1         3         2
               vv
clus            STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  TTN MUTATED           5         2          5         14         13        2
  TTN WILD-TYPE         2         3          1          2          3        2
D51V7, multiclass

Clustering(52) Variable = DSG3 MUTATION ANALYSIS
D52V1, survival
                sevent
clus2             0  1
  DSG3 MUTATED   15 18
  DSG3 WILD-TYPE 57 53
  DSG3 MUTATED DSG3 WILD-TYPE 
            33            110 
  DSG3 MUTATED DSG3 WILD-TYPE 
            18             53 
$`DSG3 MUTATED`
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I5 
       48.89        36.03       117.17        20.38       176.55       107.34 
TCGA-DA-A1I7 TCGA-DA-A1IC TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20H 
       61.18        68.09        33.73        14.70        26.86       168.26 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29R TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GJ 
       39.62         2.56        14.47        39.25        43.23        89.33 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2M6 TCGA-EE-A2MC TCGA-EE-A2MI 
       90.94       101.95        14.30       129.24        61.51       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MR TCGA-EE-A3AF TCGA-ER-A19N TCGA-FS-A1Z3 TCGA-FS-A1ZK 
       96.23       103.56        13.81        44.05        20.91        23.93 
TCGA-FS-A1ZZ TCGA-GN-A262 TCGA-GN-A266 
       27.02       120.46        10.09 

$`DSG3 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I8 
       49.74         2.70         6.38       194.83        35.93        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       65.92        23.44        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29A 
       29.82         8.65         4.93       109.64        78.87        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       47.84        13.97        32.19        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       37.35        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       78.94        24.43        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GP 
      182.01        22.55        54.71        55.00        75.48        13.87 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        19.56        67.13        21.67        28.80        19.76 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MK TCGA-EE-A2ML 
       47.28       103.27       103.17        16.96       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT 
      167.87        47.54       248.61        43.23       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        47.38       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
        0.20        76.41       117.93        84.72        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  DSG3 MUTATED DSG3 WILD-TYPE 
          2.56           0.20 
  DSG3 MUTATED DSG3 WILD-TYPE 
        204.62         345.96 
  DSG3 MUTATED DSG3 WILD-TYPE 
         44.05          47.69 
[1] "2.6 - 204.6 (44.0)" "0.2 - 346.0 (47.7)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"DSG3 WILD-TYPE"   "DSG3 MUTATED"   "DSG3 MUTATED"   "DSG3 MUTATED" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
  "DSG3 MUTATED" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "DSG3 MUTATED"   "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"DSG3 WILD-TYPE"   "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"DSG3 WILD-TYPE"   "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"DSG3 WILD-TYPE"   "DSG3 MUTATED"   "DSG3 MUTATED"   "DSG3 MUTATED" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
  "DSG3 MUTATED" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "DSG3 MUTATED"   "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"DSG3 WILD-TYPE"   "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"DSG3 WILD-TYPE"   "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"DSG3 WILD-TYPE"   "DSG3 MUTATED"   "DSG3 MUTATED"   "DSG3 MUTATED" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
  "DSG3 MUTATED" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "DSG3 MUTATED"   "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"DSG3 WILD-TYPE"   "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"DSG3 WILD-TYPE"   "DSG3 MUTATED"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "DSG3 MUTATED" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE"   "DSG3 MUTATED" "DSG3 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"DSG3 WILD-TYPE" "DSG3 WILD-TYPE" "DSG3 WILD-TYPE" 
[1] "hr=" "1.2"
D52V2, continuous
D52V3, binary
                cls
clus              0  1
  DSG3 MUTATED   11 23
  DSG3 WILD-TYPE 46 66
[1] "tbl2"
                cls
clus             [,1] [,2]
  DSG3 MUTATED     11   23
  DSG3 WILD-TYPE   46   66
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  FEMALE           11             46
  MALE             23             66
                vv
clus             M0 M1 M1A M1B M1C
  DSG3 MUTATED   26  0   1   0   1
  DSG3 WILD-TYPE 98  2   0   1   1
D52V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  DSG3 MUTATED   17  0   0   4   0   3   1  3  0
  DSG3 WILD-TYPE 64  2   7   8   3   6   4  7  2
D52V5, multiclass
D52V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  DSG3 MUTATED         5        1        1        5         1         3
  DSG3 WILD-TYPE      12        8       10       13         6         5
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DSG3 MUTATED           0         0          0          5          6        1
  DSG3 WILD-TYPE         7         5          6         11         10        3
D52V7, multiclass

Clustering(53) Variable = GML MUTATION ANALYSIS
D53V1, survival
               sevent
clus2            0  1
  GML MUTATED    4  4
  GML WILD-TYPE 68 67
  GML MUTATED GML WILD-TYPE 
            8           135 
  GML MUTATED GML WILD-TYPE 
            4            67 
$`GML MUTATED`
TCGA-D9-A1JW TCGA-DA-A1I7 TCGA-EE-A29D TCGA-EE-A2GJ TCGA-EE-A2MI TCGA-EE-A2MJ 
        2.70        61.18        13.97        89.33       204.62        96.23 
TCGA-EE-A2MT TCGA-FS-A1Z3 
       41.59        20.91 

$`GML WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA 
      194.83       176.55        35.93       107.34        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E 
      109.64        78.87       168.26        63.32        47.84        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       78.94        24.43        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL 
      314.53       135.91       182.01        22.55        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MK 
       61.51        47.28       103.27       103.17        16.96       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
      136.44        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
       26.73        13.81        23.47       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
       48.59       228.59       202.62        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  GML MUTATED GML WILD-TYPE 
          2.7           0.2 
  GML MUTATED GML WILD-TYPE 
       204.62        345.96 
  GML MUTATED GML WILD-TYPE 
       51.385        47.540 
[1] "2.7 - 204.6 (51.4)" "0.2 - 346.0 (47.5)"
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"GML WILD-TYPE"   "GML MUTATED"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"GML WILD-TYPE"   "GML MUTATED"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"GML WILD-TYPE"   "GML MUTATED"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"GML WILD-TYPE" "GML WILD-TYPE"   "GML MUTATED" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"GML WILD-TYPE" "GML WILD-TYPE" "GML WILD-TYPE" 
[1] "hr=" "1"  
D53V2, continuous
D53V3, binary
               cls
clus             0  1
  GML MUTATED    1  7
  GML WILD-TYPE 56 82
[1] "tbl2"
               cls
clus            [,1] [,2]
  GML MUTATED      1    7
  GML WILD-TYPE   56   82
        clus
vv       GML MUTATED GML WILD-TYPE
  FEMALE           1            56
  MALE             7            82
               vv
clus             M0  M1 M1A M1B M1C
  GML MUTATED     7   0   0   0   0
  GML WILD-TYPE 117   2   1   1   2
D53V4, multiclass
               vv
clus            N0 N1 N1A N1B N2A N2B N2C N3 NX
  GML MUTATED    4  0   0   1   1   1   0  0  0
  GML WILD-TYPE 77  2   7  11   2   8   5 10  2
D53V5, multiclass
D53V6, continuous
               vv
clus            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  GML MUTATED         0        1        1        1         0         1
  GML WILD-TYPE      17        8       10       17         7         7
               vv
clus            STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  GML MUTATED           0         0          0          1          1        0
  GML WILD-TYPE         7         5          6         15         15        4
D53V7, multiclass

Clustering(54) Variable = HHLA2 MUTATION ANALYSIS
D54V1, survival
                 sevent
clus2              0  1
  HHLA2 MUTATED    5  4
  HHLA2 WILD-TYPE 67 67
  HHLA2 MUTATED HHLA2 WILD-TYPE 
              9             134 
  HHLA2 MUTATED HHLA2 WILD-TYPE 
              4              67 
$`HHLA2 MUTATED`
TCGA-DA-A1I7 TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A29E TCGA-EE-A29V TCGA-EE-A2MC 
       61.18        33.73        14.70        39.62        25.87        61.51 
TCGA-EE-A3AG TCGA-ER-A3ET TCGA-FS-A1ZE 
       23.47        80.32        40.27 

$`HHLA2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 
       20.38       194.83       176.55        35.93       107.34        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       15.68        29.82         8.65        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H 
       78.87       168.26        63.32        47.84        13.97        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
        2.56        44.35        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
       55.89       345.96        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       39.25        58.75        47.54        43.23       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      182.01        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       90.94       101.95        13.87        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MD 
       67.13        21.67       129.24        28.80        19.76        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      136.44        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
        3.68        26.73        13.81       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YX 
        6.41       131.08        44.05        79.99       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       48.85        53.52        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  HHLA2 MUTATED HHLA2 WILD-TYPE 
           14.7             0.2 
  HHLA2 MUTATED HHLA2 WILD-TYPE 
          80.32          345.96 
  HHLA2 MUTATED HHLA2 WILD-TYPE 
         39.620          48.215 
[1] "14.7 - 80.3 (39.6)" "0.2 - 346.0 (48.2)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"HHLA2 WILD-TYPE"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "HHLA2 MUTATED"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
  "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
  "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"HHLA2 WILD-TYPE"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "HHLA2 MUTATED"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
  "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
  "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"HHLA2 WILD-TYPE"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "HHLA2 MUTATED"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
  "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
  "HHLA2 MUTATED" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE"   "HHLA2 MUTATED" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" "HHLA2 WILD-TYPE" 
[1] "hr=" "1.2"
D54V2, continuous
D54V3, binary
                 cls
clus               0  1
  HHLA2 MUTATED    3  6
  HHLA2 WILD-TYPE 54 83
[1] "tbl2"
                 cls
clus              [,1] [,2]
  HHLA2 MUTATED      3    6
  HHLA2 WILD-TYPE   54   83
        clus
vv       HHLA2 MUTATED HHLA2 WILD-TYPE
  FEMALE             3              54
  MALE               6              83
                 vv
clus               M0  M1 M1A M1B M1C
  HHLA2 MUTATED     8   0   0   0   0
  HHLA2 WILD-TYPE 116   2   1   1   2
D54V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  HHLA2 MUTATED    3  0   1   3   0   1   0  0  0
  HHLA2 WILD-TYPE 78  2   6   9   3   8   5 10  2
D54V5, multiclass
D54V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  HHLA2 MUTATED         1        0        0        1         0         0
  HHLA2 WILD-TYPE      16        9       11       17         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  HHLA2 MUTATED           1         0          1          2          2        0
  HHLA2 WILD-TYPE         6         5          5         14         14        4
D54V7, multiclass

Clustering(55) Variable = LILRB4 MUTATION ANALYSIS
D55V1, survival
                  sevent
clus2               0  1
  LILRB4 MUTATED    9 12
  LILRB4 WILD-TYPE 63 59
  LILRB4 MUTATED LILRB4 WILD-TYPE 
              21              122 
  LILRB4 MUTATED LILRB4 WILD-TYPE 
              12               59 
$`LILRB4 MUTATED`
TCGA-D3-A1Q7 TCGA-DA-A1I0 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20H TCGA-EE-A29D 
      121.22        20.38        26.86         4.93       168.26        13.97 
TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A29V TCGA-EE-A2A6 TCGA-EE-A2GS TCGA-EE-A2GU 
       39.62        18.58        25.87        58.75        55.59        67.13 
TCGA-EE-A2M6 TCGA-EE-A2MD TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A3AE TCGA-ER-A19F 
      129.24        47.28       103.56       136.44        26.73        26.37 
TCGA-FS-A1Z0 TCGA-FS-A1ZA TCGA-FS-A1ZU 
      202.62        27.68        26.56 

$`LILRB4 WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
       58.03        71.24         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 
        2.70         6.38        48.89        36.03       117.17       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A20B TCGA-EE-A20F 
       29.82         8.65        33.73        14.70       109.64        78.87 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P 
       63.32        47.84        32.19         2.56        44.35        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 
       37.35        14.47        55.89       345.96        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       78.94        24.43        39.25        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT 
       75.48        90.94       101.95        13.87        14.30        19.56 
TCGA-EE-A2M5 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
       21.67        28.80        19.76        61.51       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       47.54       248.61        43.23        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73        25.84         3.68        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       12.59         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
      216.92        48.59       228.59        20.91        28.08         7.76 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       53.16        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  LILRB4 MUTATED LILRB4 WILD-TYPE 
            4.93             0.20 
  LILRB4 MUTATED LILRB4 WILD-TYPE 
          202.62           345.96 
  LILRB4 MUTATED LILRB4 WILD-TYPE 
          39.620           48.215 
[1] "4.9 - 202.6 (39.6)" "0.2 - 346.0 (48.2)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
  "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
  "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED"   "LILRB4 MUTATED" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
  "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
  "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED"   "LILRB4 MUTATED" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
  "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
  "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED"   "LILRB4 MUTATED" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE"   "LILRB4 MUTATED" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"LILRB4 WILD-TYPE"   "LILRB4 MUTATED" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" "LILRB4 WILD-TYPE" 
[1] "hr=" "1.3"
D55V2, continuous
D55V3, binary
                  cls
clus                0  1
  LILRB4 MUTATED    8 14
  LILRB4 WILD-TYPE 49 75
[1] "tbl2"
                  cls
clus               [,1] [,2]
  LILRB4 MUTATED      8   14
  LILRB4 WILD-TYPE   49   75
        clus
vv       LILRB4 MUTATED LILRB4 WILD-TYPE
  FEMALE              8               49
  MALE               14               75
                  vv
clus                M0  M1 M1A M1B M1C
  LILRB4 MUTATED    20   0   1   0   0
  LILRB4 WILD-TYPE 104   2   0   1   2
D55V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  LILRB4 MUTATED   15  0   0   3   0   0   1  2  0
  LILRB4 WILD-TYPE 66  2   7   9   3   9   4  8  2
D55V5, multiclass
D55V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  LILRB4 MUTATED         4        4        2        2         0         0
  LILRB4 WILD-TYPE      13        5        9       16         7         8
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  LILRB4 MUTATED           1         0          0          2          4
  LILRB4 WILD-TYPE         6         5          6         14         12
                  vv
clus               STAGE IV
  LILRB4 MUTATED          0
  LILRB4 WILD-TYPE        4
D55V7, multiclass

Clustering(56) Variable = SLC38A4 MUTATION ANALYSIS
D56V1, survival
                   sevent
clus2                0  1
  SLC38A4 MUTATED    8  8
  SLC38A4 WILD-TYPE 64 63
  SLC38A4 MUTATED SLC38A4 WILD-TYPE 
               16               127 
  SLC38A4 MUTATED SLC38A4 WILD-TYPE 
                8                63 
$`SLC38A4 MUTATED`
TCGA-D9-A1JW TCGA-DA-A1I1 TCGA-DA-A1IC TCGA-EE-A181 TCGA-EE-A20H TCGA-EE-A29A 
        2.70       194.83        68.09        33.73       168.26        63.32 
TCGA-EE-A29M TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2GI TCGA-EE-A2MI TCGA-EE-A2MJ 
       44.35        46.82        24.43        22.55       204.62        96.23 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-GN-A265 TCGA-GN-A266 
      136.44        41.59        84.72        10.09 

$`SLC38A4 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       23.44        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
        8.65        14.70        26.86         4.93       109.64        78.87 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N 
       47.84        13.97        39.62        32.19         2.56        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       17.92        78.94        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      314.53       135.91       182.01        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MK 
       61.51        47.28       103.27       103.17        16.96       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       76.41       120.46       117.93        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  SLC38A4 MUTATED SLC38A4 WILD-TYPE 
              2.7               0.2 
  SLC38A4 MUTATED SLC38A4 WILD-TYPE 
           204.62            345.96 
  SLC38A4 MUTATED SLC38A4 WILD-TYPE 
            55.07             47.54 
[1] "2.7 - 204.6 (55.1)" "0.2 - 346.0 (47.5)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
  "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
  "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
  "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
  "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
  "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
  "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"SLC38A4 WILD-TYPE"   "SLC38A4 MUTATED"   "SLC38A4 MUTATED" "SLC38A4 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" "SLC38A4 WILD-TYPE" 
[1] "hr=" "1.1"
D56V2, continuous
D56V3, binary
                   cls
clus                 0  1
  SLC38A4 MUTATED    3 13
  SLC38A4 WILD-TYPE 54 76
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC38A4 MUTATED      3   13
  SLC38A4 WILD-TYPE   54   76
        clus
vv       SLC38A4 MUTATED SLC38A4 WILD-TYPE
  FEMALE               3                54
  MALE                13                76
                   vv
clus                 M0  M1 M1A M1B M1C
  SLC38A4 MUTATED    14   0   0   0   0
  SLC38A4 WILD-TYPE 110   2   1   1   2
D56V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  SLC38A4 MUTATED    9  0   1   1   1   0   1  1  0
  SLC38A4 WILD-TYPE 72  2   6  11   2   9   4  9  2
D56V5, multiclass
D56V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  SLC38A4 MUTATED         1        1        2        3         1         1
  SLC38A4 WILD-TYPE      16        8        9       15         6         7
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  SLC38A4 MUTATED           0         0          1          2          1
  SLC38A4 WILD-TYPE         7         5          5         14         15
                   vv
clus                STAGE IV
  SLC38A4 MUTATED          0
  SLC38A4 WILD-TYPE        4
D56V7, multiclass

Clustering(57) Variable = OR2L3 MUTATION ANALYSIS
D57V1, survival
                 sevent
clus2              0  1
  OR2L3 MUTATED    3  7
  OR2L3 WILD-TYPE 69 64
  OR2L3 MUTATED OR2L3 WILD-TYPE 
             10             133 
  OR2L3 MUTATED OR2L3 WILD-TYPE 
              7              64 
$`OR2L3 MUTATED`
TCGA-D3-A3C6 TCGA-DA-A1I0 TCGA-EE-A2GM TCGA-EE-A2M5 TCGA-EE-A2MJ TCGA-EE-A2MM 
       58.03        20.38        75.48        21.67        96.23       167.87 
TCGA-EE-A2MR TCGA-EE-A3AG TCGA-FS-A1ZF TCGA-FS-A1ZZ 
      103.56        23.47        15.45        27.02 

$`OR2L3 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
      121.22        71.24         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 
        2.70         6.38        48.89        36.03       117.17       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       54.71        55.00        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        19.56        67.13       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS 
      144.76       203.01        47.54       248.61        43.23       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       26.73        13.81       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       48.85        53.52        40.27         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       26.56        49.48        27.06         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  OR2L3 MUTATED OR2L3 WILD-TYPE 
          15.45            0.20 
  OR2L3 MUTATED OR2L3 WILD-TYPE 
         167.87          345.96 
  OR2L3 MUTATED OR2L3 WILD-TYPE 
         42.525          47.540 
[1] "15.4 - 167.9 (42.5)" "0.2 - 346.0 (47.5)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE"   "OR2L3 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE"   "OR2L3 MUTATED" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE"   "OR2L3 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE"   "OR2L3 MUTATED" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR2L3 WILD-TYPE"   "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE"   "OR2L3 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE"   "OR2L3 MUTATED" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "OR2L3 MUTATED" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" "OR2L3 WILD-TYPE" 
[1] "hr=" "1.6"
D57V2, continuous
D57V3, binary
                 cls
clus               0  1
  OR2L3 MUTATED    5  7
  OR2L3 WILD-TYPE 52 82
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2L3 MUTATED      5    7
  OR2L3 WILD-TYPE   52   82
        clus
vv       OR2L3 MUTATED OR2L3 WILD-TYPE
  FEMALE             5              52
  MALE               7              82
                 vv
clus               M0  M1 M1A M1B M1C
  OR2L3 MUTATED     8   0   1   0   0
  OR2L3 WILD-TYPE 116   2   0   1   2
D57V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  OR2L3 MUTATED    8  0   0   0   0   0   0  1  0
  OR2L3 WILD-TYPE 73  2   7  12   3   9   5  9  2
D57V5, multiclass
D57V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OR2L3 MUTATED         3        0        1        1         0         1
  OR2L3 WILD-TYPE      14        9       10       17         7         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  OR2L3 MUTATED           2         0          0          0          1        0
  OR2L3 WILD-TYPE         5         5          6         16         15        4
D57V7, multiclass

Clustering(58) Variable = HBD MUTATION ANALYSIS
D58V1, survival
               sevent
clus2            0  1
  HBD MUTATED    3  5
  HBD WILD-TYPE 69 66
  HBD MUTATED HBD WILD-TYPE 
            8           135 
  HBD MUTATED HBD WILD-TYPE 
            5            66 
$`HBD MUTATED`
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A2A6 
       33.73        14.70         4.93        47.84        13.97        58.75 
TCGA-EE-A2MJ TCGA-EE-A3AE 
       96.23        26.73 

$`HBD WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A20B 
      215.44        15.68        29.82         8.65        26.86       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
       78.87       168.26        63.32        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       39.25        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
      101.95        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML 
      103.27       103.17        16.96       204.62       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS 
      167.87        47.54       248.61        43.23       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  HBD MUTATED HBD WILD-TYPE 
         4.93          0.20 
  HBD MUTATED HBD WILD-TYPE 
        96.23        345.96 
  HBD MUTATED HBD WILD-TYPE 
        30.23         48.59 
[1] "4.9 - 96.2 (30.2)"  "0.2 - 346.0 (48.6)"
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED"   "HBD MUTATED" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"HBD WILD-TYPE"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"HBD WILD-TYPE"   "HBD MUTATED"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED"   "HBD MUTATED" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"HBD WILD-TYPE"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"HBD WILD-TYPE"   "HBD MUTATED"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED"   "HBD MUTATED" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"HBD WILD-TYPE"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"HBD WILD-TYPE"   "HBD MUTATED"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"HBD WILD-TYPE" "HBD WILD-TYPE"   "HBD MUTATED" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"HBD WILD-TYPE" "HBD WILD-TYPE" "HBD WILD-TYPE" 
[1] "hr=" "2.2"
D58V2, continuous
D58V3, binary
               cls
clus             0  1
  HBD MUTATED    4  4
  HBD WILD-TYPE 53 85
[1] "tbl2"
               cls
clus            [,1] [,2]
  HBD MUTATED      4    4
  HBD WILD-TYPE   53   85
        clus
vv       HBD MUTATED HBD WILD-TYPE
  FEMALE           4            53
  MALE             4            85
               vv
clus             M0  M1 M1A M1B M1C
  HBD MUTATED     8   0   0   0   0
  HBD WILD-TYPE 116   2   1   1   2
D58V4, multiclass
               vv
clus            N0 N1 N1A N1B N2A N2B N2C N3 NX
  HBD MUTATED    5  0   0   2   0   0   0  1  0
  HBD WILD-TYPE 76  2   7  10   3   9   5  9  2
D58V5, multiclass
D58V6, continuous
               vv
clus            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  HBD MUTATED         0        2        1        2         0         0
  HBD WILD-TYPE      17        7       10       16         7         8
               vv
clus            STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  HBD MUTATED           0         0          0          0          3        0
  HBD WILD-TYPE         7         5          6         16         13        4
D58V7, multiclass

Clustering(59) Variable = TBC1D3B MUTATION ANALYSIS
D59V1, survival
                   sevent
clus2                0  1
  TBC1D3B MUTATED    1  2
  TBC1D3B WILD-TYPE 71 69
  TBC1D3B MUTATED TBC1D3B WILD-TYPE 
                3               140 
  TBC1D3B MUTATED TBC1D3B WILD-TYPE 
                2                69 
$`TBC1D3B MUTATED`
TCGA-EE-A182 TCGA-EE-A2GT TCGA-GN-A266 
       14.70        19.56        10.09 

$`TBC1D3B WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 
      215.44        15.68        29.82         8.65        33.73        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        14.30        55.59        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  TBC1D3B MUTATED TBC1D3B WILD-TYPE 
            10.09              0.20 
  TBC1D3B MUTATED TBC1D3B WILD-TYPE 
            19.56            345.96 
  TBC1D3B MUTATED TBC1D3B WILD-TYPE 
           14.700            48.215 
[1] "10.1 - 19.6 (14.7)" "0.2 - 346.0 (48.2)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"TBC1D3B WILD-TYPE"   "TBC1D3B MUTATED" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE"   "TBC1D3B MUTATED" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE"   "TBC1D3B MUTATED" "TBC1D3B WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"TBC1D3B WILD-TYPE"   "TBC1D3B MUTATED" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE"   "TBC1D3B MUTATED" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE"   "TBC1D3B MUTATED" "TBC1D3B WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"TBC1D3B WILD-TYPE"   "TBC1D3B MUTATED" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE"   "TBC1D3B MUTATED" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE"   "TBC1D3B MUTATED" "TBC1D3B WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
[1] "hr=" "6.9"
D59V2, continuous
D59V3, binary
                   cls
clus                 0  1
  TBC1D3B MUTATED    1  2
  TBC1D3B WILD-TYPE 56 87
[1] "tbl2"
                   cls
clus                [,1] [,2]
  TBC1D3B MUTATED      1    2
  TBC1D3B WILD-TYPE   56   87
        clus
vv       TBC1D3B MUTATED TBC1D3B WILD-TYPE
  FEMALE               1                56
  MALE                 2                87
                   vv
clus                 M0  M1 M1A M1B M1C
  TBC1D3B MUTATED     2   0   0   0   0
  TBC1D3B WILD-TYPE 122   2   1   1   2
D59V4, multiclass
[1] "Remove cluster labels:" "TBC1D3B MUTATED"       
clus
  TBC1D3B MUTATED TBC1D3B WILD-TYPE 
                2               128 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A183        TCGA-EE-A185        TCGA-EE-A20B 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A        TCGA-EE-A29C 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H        TCGA-EE-A29L 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P        TCGA-EE-A29Q 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T        TCGA-EE-A29V 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1        TCGA-EE-A2A2 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB        TCGA-EE-A2GC 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH        TCGA-EE-A2GI 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL        TCGA-EE-A2GM 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP        TCGA-EE-A2GR 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GS        TCGA-EE-A2GU        TCGA-EE-A2M5        TCGA-EE-A2M6 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2M7        TCGA-EE-A2M8        TCGA-EE-A2MC        TCGA-EE-A2MD 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2ME        TCGA-EE-A2MG        TCGA-EE-A2MH        TCGA-EE-A2MI 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MJ        TCGA-EE-A2MK        TCGA-EE-A2ML        TCGA-EE-A2MM 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MN        TCGA-EE-A2MP        TCGA-EE-A2MQ        TCGA-EE-A2MR 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MS        TCGA-EE-A2MT        TCGA-EE-A2MU        TCGA-EE-A3AE 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-ER-A19O        TCGA-ER-A1A1        TCGA-ER-A3ET        TCGA-FS-A1YW 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0        TCGA-FS-A1Z4 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1Z7        TCGA-FS-A1ZA        TCGA-FS-A1ZB        TCGA-FS-A1ZD 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZE        TCGA-FS-A1ZF        TCGA-FS-A1ZG        TCGA-FS-A1ZH 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZJ        TCGA-FS-A1ZK        TCGA-FS-A1ZM        TCGA-FS-A1ZP 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZR        TCGA-FS-A1ZS        TCGA-FS-A1ZT        TCGA-FS-A1ZU 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZW        TCGA-FS-A1ZY        TCGA-FS-A1ZZ        TCGA-FW-A3I3 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-GN-A261        TCGA-GN-A267        TCGA-GN-A268        TCGA-GN-A26A 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  TBC1D3B MUTATED    1  0   0   1   0   0   0  0  0
  TBC1D3B WILD-TYPE 80  2   7  11   3   9   5 10  2
D59V5, multiclass
[1] "Remove cluster labels:" "TBC1D3B MUTATED"       
clus
  TBC1D3B MUTATED TBC1D3B WILD-TYPE 
                2               129 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A183        TCGA-EE-A185        TCGA-EE-A20B 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A        TCGA-EE-A29C 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H        TCGA-EE-A29L 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P        TCGA-EE-A29Q 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T        TCGA-EE-A29V 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1        TCGA-EE-A2A2 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB        TCGA-EE-A2GC 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH        TCGA-EE-A2GI 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL        TCGA-EE-A2GM 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP        TCGA-EE-A2GR 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GS        TCGA-EE-A2GU        TCGA-EE-A2M5        TCGA-EE-A2M6 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2M7        TCGA-EE-A2M8        TCGA-EE-A2MC        TCGA-EE-A2MD 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2ME        TCGA-EE-A2MG        TCGA-EE-A2MH        TCGA-EE-A2MI 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MJ        TCGA-EE-A2MK        TCGA-EE-A2ML        TCGA-EE-A2MM 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MN        TCGA-EE-A2MP        TCGA-EE-A2MQ        TCGA-EE-A2MR 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MS        TCGA-EE-A2MT        TCGA-EE-A2MU        TCGA-EE-A3AE 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-ER-A19O        TCGA-ER-A1A1        TCGA-ER-A3ET        TCGA-FS-A1YW 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0        TCGA-FS-A1Z4 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1Z7        TCGA-FS-A1ZA        TCGA-FS-A1ZB        TCGA-FS-A1ZD 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZE        TCGA-FS-A1ZF        TCGA-FS-A1ZG        TCGA-FS-A1ZH 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZJ        TCGA-FS-A1ZK        TCGA-FS-A1ZM        TCGA-FS-A1ZP 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZR        TCGA-FS-A1ZS        TCGA-FS-A1ZT        TCGA-FS-A1ZU 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZW        TCGA-FS-A1ZY        TCGA-FS-A1ZZ        TCGA-FW-A3I3 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-GN-A261        TCGA-GN-A267        TCGA-GN-A268        TCGA-GN-A26A 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-GN-A26D 
"TBC1D3B WILD-TYPE" 
D59V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TBC1D3B MUTATED         0        0        0        0         1         0
  TBC1D3B WILD-TYPE      17        9       11       18         6         8
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  TBC1D3B MUTATED           0         0          0          0          1
  TBC1D3B WILD-TYPE         7         5          6         16         15
                   vv
clus                STAGE IV
  TBC1D3B MUTATED          0
  TBC1D3B WILD-TYPE        4
D59V7, multiclass
[1] "Remove cluster labels:" "TBC1D3B MUTATED"       
clus
  TBC1D3B MUTATED TBC1D3B WILD-TYPE 
                2               122 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A183        TCGA-EE-A185        TCGA-EE-A20B 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A        TCGA-EE-A29C 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H        TCGA-EE-A29L 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29M        TCGA-EE-A29P        TCGA-EE-A29Q        TCGA-EE-A29R 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A29S        TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2A1        TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GB        TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GH        TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GL        TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2GP        TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GU 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AE        TCGA-EE-A3AH        TCGA-ER-A19D 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-ER-A19J        TCGA-ER-A19O        TCGA-ER-A1A1        TCGA-ER-A3ET 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA        TCGA-FS-A1ZB 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF        TCGA-FS-A1ZG 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK        TCGA-FS-A1ZM 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS        TCGA-FS-A1ZT 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY        TCGA-FS-A1ZZ 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A267        TCGA-GN-A268 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 
       TCGA-GN-A26A        TCGA-GN-A26D 
"TBC1D3B WILD-TYPE" "TBC1D3B WILD-TYPE" 

Clustering(60) Variable = TCEB3C MUTATION ANALYSIS
D60V1, survival
                  sevent
clus2               0  1
  TCEB3C MUTATED   12 10
  TCEB3C WILD-TYPE 60 61
  TCEB3C MUTATED TCEB3C WILD-TYPE 
              22              121 
  TCEB3C MUTATED TCEB3C WILD-TYPE 
              10               61 
$`TCEB3C MUTATED`
TCGA-D3-A3MV TCGA-D9-A1JW TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1IC TCGA-EE-A181 
       21.47         2.70        35.93        61.18        68.09        33.73 
TCGA-EE-A182 TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29S TCGA-EE-A2A2 TCGA-EE-A2GB 
       14.70        39.62         2.56        55.89        24.43        47.54 
TCGA-EE-A2GS TCGA-EE-A2M5 TCGA-EE-A2ML TCGA-EE-A2MS TCGA-EE-A2MT TCGA-ER-A19F 
       55.59        21.67       203.01       136.44        41.59        26.37 
TCGA-FS-A1ZE TCGA-FS-A1ZK TCGA-FS-A1ZZ TCGA-GN-A266 
       40.27        23.93        27.02        10.09 

$`TCEB3C WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24         9.30       148.31        49.74 
TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
        6.38        48.89        36.03       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 
      176.55       107.34        53.92        65.92        23.44        28.60 
TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A183 
       10.49       215.44        15.68        29.82         8.65        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       13.97        32.19        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       14.47       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       39.25        58.75        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
      101.95        13.87        14.30        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MN 
       16.96       204.62        96.23       144.76       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      248.61        43.23       103.56        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       12.59         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG 
        7.76        27.68        48.85        53.52        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        47.38       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 
       53.16        26.56        49.48        27.06         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      120.46       117.93        84.72        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  TCEB3C MUTATED TCEB3C WILD-TYPE 
            2.56             0.20 
  TCEB3C MUTATED TCEB3C WILD-TYPE 
          203.01           345.96 
  TCEB3C MUTATED TCEB3C WILD-TYPE 
           34.83            49.48 
[1] "2.6 - 203.0 (34.8)" "0.2 - 346.0 (49.5)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "TCEB3C MUTATED"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED"   "TCEB3C MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "TCEB3C MUTATED"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED"   "TCEB3C MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "TCEB3C MUTATED"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED"   "TCEB3C MUTATED" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "TCEB3C MUTATED" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE"   "TCEB3C MUTATED" "TCEB3C WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" "TCEB3C WILD-TYPE" 
[1] "hr=" "1.3"
D60V2, continuous
D60V3, binary
                  cls
clus                0  1
  TCEB3C MUTATED    5 17
  TCEB3C WILD-TYPE 52 72
[1] "tbl2"
                  cls
clus               [,1] [,2]
  TCEB3C MUTATED      5   17
  TCEB3C WILD-TYPE   52   72
        clus
vv       TCEB3C MUTATED TCEB3C WILD-TYPE
  FEMALE              5               52
  MALE               17               72
                  vv
clus                M0  M1 M1A M1B M1C
  TCEB3C MUTATED    21   0   0   0   0
  TCEB3C WILD-TYPE 103   2   1   1   2
D60V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  TCEB3C MUTATED   11  0   1   3   2   2   1  1  0
  TCEB3C WILD-TYPE 70  2   6   9   1   7   4  9  2
D60V5, multiclass
D60V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TCEB3C MUTATED         1        0        2        4         1         1
  TCEB3C WILD-TYPE      16        9        9       14         6         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  TCEB3C MUTATED           1         0          1          6          2
  TCEB3C WILD-TYPE         6         5          5         10         14
                  vv
clus               STAGE IV
  TCEB3C MUTATED          0
  TCEB3C WILD-TYPE        4
D60V7, multiclass

Clustering(61) Variable = CYLC2 MUTATION ANALYSIS
D61V1, survival
                 sevent
clus2              0  1
  CYLC2 MUTATED   10  6
  CYLC2 WILD-TYPE 62 65
  CYLC2 MUTATED CYLC2 WILD-TYPE 
             16             127 
  CYLC2 MUTATED CYLC2 WILD-TYPE 
              6              65 
$`CYLC2 MUTATED`
TCGA-DA-A1HW TCGA-DA-A1I1 TCGA-DA-A1I7 TCGA-EE-A182 TCGA-EE-A29D TCGA-EE-A29T 
       36.03       194.83        61.18        14.70        13.97       345.96 
TCGA-EE-A2A2 TCGA-EE-A2GC TCGA-EE-A2GH TCGA-EE-A2GT TCGA-EE-A2MD TCGA-EE-A2MQ 
       24.43        43.23       182.01        19.56        47.28        43.23 
TCGA-EE-A3AA TCGA-EE-A3AD TCGA-FS-A1Z3 TCGA-FS-A1ZW 
        4.24         3.68        20.91        49.48 

$`CYLC2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        48.89       117.17        20.38 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
      176.55        35.93       107.34        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       68.09        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
        8.65        33.73        26.86         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
      168.26        63.32        47.84        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 
       25.87        17.92        46.82        78.94        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
       47.54       314.53       135.91        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       55.00        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       61.51       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR 
      144.76       203.01       167.87        47.54       248.61       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AE 
      136.44        41.59        53.26       122.73        25.84        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      228.59       202.62        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       26.56        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  CYLC2 MUTATED CYLC2 WILD-TYPE 
           3.68            0.20 
  CYLC2 MUTATED CYLC2 WILD-TYPE 
         345.96          314.53 
  CYLC2 MUTATED CYLC2 WILD-TYPE 
          39.63           48.85 
[1] "3.7 - 346.0 (39.6)" "0.2 - 314.5 (48.9)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "CYLC2 MUTATED" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE"   "CYLC2 MUTATED" "CYLC2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" "CYLC2 WILD-TYPE" 
[1] "hr=" "1.3"
D61V2, continuous
D61V3, binary
                 cls
clus               0  1
  CYLC2 MUTATED    5 11
  CYLC2 WILD-TYPE 52 78
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CYLC2 MUTATED      5   11
  CYLC2 WILD-TYPE   52   78
        clus
vv       CYLC2 MUTATED CYLC2 WILD-TYPE
  FEMALE             5              52
  MALE              11              78
                 vv
clus               M0  M1 M1A M1B M1C
  CYLC2 MUTATED    13   0   0   0   0
  CYLC2 WILD-TYPE 111   2   1   1   2
D61V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  CYLC2 MUTATED    4  0   1   4   1   1   0  1  1
  CYLC2 WILD-TYPE 77  2   6   8   2   8   5  9  1
D61V5, multiclass
D61V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CYLC2 MUTATED         1        0        0        1         1         1
  CYLC2 WILD-TYPE      16        9       11       17         6         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  CYLC2 MUTATED           0         0          1          4          3        0
  CYLC2 WILD-TYPE         7         5          5         12         13        4
D61V7, multiclass

Clustering(62) Variable = HBG2 MUTATION ANALYSIS
D62V1, survival
                sevent
clus2             0  1
  HBG2 MUTATED    4  2
  HBG2 WILD-TYPE 68 69
  HBG2 MUTATED HBG2 WILD-TYPE 
             6            137 
  HBG2 MUTATED HBG2 WILD-TYPE 
             2             69 
$`HBG2 MUTATED`
TCGA-DA-A3F8 TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A2GM TCGA-EE-A2GO TCGA-FS-A1ZP 
       15.68        55.89        25.87        75.48       101.95        74.73 

$`HBG2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
      215.44        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 
       56.42        37.35        14.47       345.96        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       78.94        24.43        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        90.94        13.87        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       67.13        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  HBG2 MUTATED HBG2 WILD-TYPE 
         15.68           0.20 
  HBG2 MUTATED HBG2 WILD-TYPE 
        101.95         345.96 
  HBG2 MUTATED HBG2 WILD-TYPE 
         65.31          47.54 
[1] "15.7 - 102.0 (65.3)" "0.2 - 346.0 (47.5)" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "HBG2 MUTATED" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "HBG2 MUTATED" "HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "HBG2 MUTATED" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "HBG2 MUTATED" "HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "HBG2 MUTATED" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "HBG2 MUTATED" "HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"HBG2 WILD-TYPE"   "HBG2 MUTATED" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"HBG2 WILD-TYPE" "HBG2 WILD-TYPE" "HBG2 WILD-TYPE" 
[1] "hr=" "1.4"
D62V2, continuous
D62V3, binary
                cls
clus              0  1
  HBG2 MUTATED    2  4
  HBG2 WILD-TYPE 55 85
[1] "tbl2"
                cls
clus             [,1] [,2]
  HBG2 MUTATED      2    4
  HBG2 WILD-TYPE   55   85
        clus
vv       HBG2 MUTATED HBG2 WILD-TYPE
  FEMALE            2             55
  MALE              4             85
                vv
clus              M0  M1 M1A M1B M1C
  HBG2 MUTATED     6   0   0   0   0
  HBG2 WILD-TYPE 118   2   1   1   2
D62V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  HBG2 MUTATED    4  0   0   1   0   1   0  0  0
  HBG2 WILD-TYPE 77  2   7  11   3   8   5 10  2
D62V5, multiclass
D62V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  HBG2 MUTATED         0        0        0        2         1         0
  HBG2 WILD-TYPE      17        9       11       16         6         8
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  HBG2 MUTATED           1         0          0          1          1        0
  HBG2 WILD-TYPE         6         5          6         15         15        4
D62V7, multiclass

Clustering(63) Variable = LOC649330 MUTATION ANALYSIS
D63V1, survival
                     sevent
clus2                  0  1
  LOC649330 MUTATED    8  8
  LOC649330 WILD-TYPE 64 63
  LOC649330 MUTATED LOC649330 WILD-TYPE 
                 16                 127 
  LOC649330 MUTATED LOC649330 WILD-TYPE 
                  8                  63 
$`LOC649330 MUTATED`
TCGA-D9-A1JW TCGA-DA-A1HV TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A29V TCGA-EE-A2A1 
        2.70        48.89        33.73        14.70        25.87        78.94 
TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2MJ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A3AA 
       13.87        55.59        96.23       103.56       136.44         4.24 
TCGA-EE-A3AC TCGA-ER-A19F TCGA-GN-A266 TCGA-GN-A268 
       25.84        26.37        10.09        62.76 

$`LOC649330 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
       49.74         6.38        36.03       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
       29.82         8.65        26.86         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H 
      168.26        63.32        47.84        13.97        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
        2.56        44.35        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2A5 
       55.89       345.96        17.92        46.82        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
      101.95        14.30        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
       16.96       204.62       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AD 
      248.61        43.23        41.59        53.26       122.73         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J 
       26.73        13.81        23.47       138.77        12.59         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26A 
       76.41       120.46       117.93        84.72        64.41        32.48 
TCGA-GN-A26D 
       39.58 

  LOC649330 MUTATED LOC649330 WILD-TYPE 
                2.7                 0.2 
  LOC649330 MUTATED LOC649330 WILD-TYPE 
             136.44              345.96 
  LOC649330 MUTATED LOC649330 WILD-TYPE 
              30.05               47.84 
[1] "2.7 - 136.4 (30.0)" "0.2 - 346.0 (47.8)"
         TCGA-D3-A1Q7          TCGA-D3-A3C6          TCGA-D3-A3CC 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-D3-A3MO          TCGA-D3-A3MV          TCGA-D9-A148 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-D9-A149          TCGA-D9-A1JW          TCGA-D9-A1JX 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1HV          TCGA-DA-A1HW          TCGA-DA-A1HY 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1I0          TCGA-DA-A1I1          TCGA-DA-A1I2 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1I4          TCGA-DA-A1I5          TCGA-DA-A1I7 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1I8          TCGA-DA-A1IA          TCGA-DA-A1IB 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1IC          TCGA-DA-A3F2          TCGA-DA-A3F3 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A3F5          TCGA-DA-A3F8          TCGA-EE-A17X 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A17Z          TCGA-EE-A181          TCGA-EE-A182 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED"   "LOC649330 MUTATED" 
         TCGA-EE-A183          TCGA-EE-A185          TCGA-EE-A20B 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A20F          TCGA-EE-A20H          TCGA-EE-A29A 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29C          TCGA-EE-A29D          TCGA-EE-A29E 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29H          TCGA-EE-A29L          TCGA-EE-A29M 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29N          TCGA-EE-A29P          TCGA-EE-A29Q 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29R          TCGA-EE-A29S          TCGA-EE-A29T 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29V          TCGA-EE-A29X          TCGA-EE-A2A0 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2A1          TCGA-EE-A2A2          TCGA-EE-A2A5 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2A6          TCGA-EE-A2GB          TCGA-EE-A2GC 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GD          TCGA-EE-A2GE          TCGA-EE-A2GH 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GI          TCGA-EE-A2GJ          TCGA-EE-A2GK 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GL          TCGA-EE-A2GM          TCGA-EE-A2GN 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GO          TCGA-EE-A2GP          TCGA-EE-A2GR 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GS          TCGA-EE-A2GT          TCGA-EE-A2GU 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2M5          TCGA-EE-A2M6          TCGA-EE-A2M7 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2M8          TCGA-EE-A2MC          TCGA-EE-A2MD 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2ME          TCGA-EE-A2MG          TCGA-EE-A2MH 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2MI          TCGA-EE-A2MJ          TCGA-EE-A2MK 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2ML          TCGA-EE-A2MM          TCGA-EE-A2MN 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2MP          TCGA-EE-A2MQ          TCGA-EE-A2MR 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE"   "LOC649330 MUTATED" 
         TCGA-EE-A2MS          TCGA-EE-A2MT          TCGA-EE-A2MU 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A3AA          TCGA-EE-A3AB          TCGA-EE-A3AC 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE"   "LOC649330 MUTATED" 
         TCGA-EE-A3AD          TCGA-EE-A3AE          TCGA-EE-A3AF 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A3AG          TCGA-EE-A3AH          TCGA-ER-A19D 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-ER-A19F          TCGA-ER-A19J          TCGA-ER-A19L 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-ER-A19N          TCGA-ER-A1A1          TCGA-ER-A3ET 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1YW          TCGA-FS-A1YX          TCGA-FS-A1YY 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1Z0          TCGA-FS-A1Z3          TCGA-FS-A1Z4 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1Z7          TCGA-FS-A1ZA          TCGA-FS-A1ZB 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZD          TCGA-FS-A1ZE          TCGA-FS-A1ZF 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZG          TCGA-FS-A1ZH          TCGA-FS-A1ZJ 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZK          TCGA-FS-A1ZM          TCGA-FS-A1ZP 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZR          TCGA-FS-A1ZS          TCGA-FS-A1ZT 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZU          TCGA-FS-A1ZW          TCGA-FS-A1ZY 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZZ          TCGA-FW-A3I3          TCGA-GN-A261 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-GN-A262          TCGA-GN-A264          TCGA-GN-A265 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-GN-A266          TCGA-GN-A267          TCGA-GN-A268 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE"   "LOC649330 MUTATED" 
         TCGA-GN-A26A          TCGA-GN-A26D 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-D3-A1Q7          TCGA-D3-A3C6          TCGA-D3-A3CC 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-D3-A3MO          TCGA-D3-A3MV          TCGA-D9-A148 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-D9-A149          TCGA-D9-A1JW          TCGA-D9-A1JX 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1HV          TCGA-DA-A1HW          TCGA-DA-A1HY 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1I0          TCGA-DA-A1I1          TCGA-DA-A1I2 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1I4          TCGA-DA-A1I5          TCGA-DA-A1I7 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1I8          TCGA-DA-A1IA          TCGA-DA-A1IB 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1IC          TCGA-DA-A3F2          TCGA-DA-A3F3 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A3F5          TCGA-DA-A3F8          TCGA-EE-A17X 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A17Z          TCGA-EE-A181          TCGA-EE-A182 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED"   "LOC649330 MUTATED" 
         TCGA-EE-A183          TCGA-EE-A185          TCGA-EE-A20B 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A20F          TCGA-EE-A20H          TCGA-EE-A29A 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29C          TCGA-EE-A29D          TCGA-EE-A29E 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29H          TCGA-EE-A29L          TCGA-EE-A29M 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29N          TCGA-EE-A29P          TCGA-EE-A29Q 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29R          TCGA-EE-A29S          TCGA-EE-A29T 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29V          TCGA-EE-A29X          TCGA-EE-A2A0 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2A1          TCGA-EE-A2A2          TCGA-EE-A2A5 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2A6          TCGA-EE-A2GB          TCGA-EE-A2GC 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GD          TCGA-EE-A2GE          TCGA-EE-A2GH 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GI          TCGA-EE-A2GJ          TCGA-EE-A2GK 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GL          TCGA-EE-A2GM          TCGA-EE-A2GN 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GO          TCGA-EE-A2GP          TCGA-EE-A2GR 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GS          TCGA-EE-A2GT          TCGA-EE-A2GU 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2M5          TCGA-EE-A2M6          TCGA-EE-A2M7 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2M8          TCGA-EE-A2MC          TCGA-EE-A2MD 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2ME          TCGA-EE-A2MG          TCGA-EE-A2MH 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2MI          TCGA-EE-A2MJ          TCGA-EE-A2MK 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2ML          TCGA-EE-A2MM          TCGA-EE-A2MN 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2MP          TCGA-EE-A2MQ          TCGA-EE-A2MR 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE"   "LOC649330 MUTATED" 
         TCGA-EE-A2MS          TCGA-EE-A2MT          TCGA-EE-A2MU 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A3AA          TCGA-EE-A3AB          TCGA-EE-A3AC 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE"   "LOC649330 MUTATED" 
         TCGA-EE-A3AD          TCGA-EE-A3AE          TCGA-EE-A3AF 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A3AG          TCGA-EE-A3AH          TCGA-ER-A19D 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-ER-A19F          TCGA-ER-A19J          TCGA-ER-A19L 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-ER-A19N          TCGA-ER-A1A1          TCGA-ER-A3ET 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1YW          TCGA-FS-A1YX          TCGA-FS-A1YY 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1Z0          TCGA-FS-A1Z3          TCGA-FS-A1Z4 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1Z7          TCGA-FS-A1ZA          TCGA-FS-A1ZB 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZD          TCGA-FS-A1ZE          TCGA-FS-A1ZF 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZG          TCGA-FS-A1ZH          TCGA-FS-A1ZJ 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZK          TCGA-FS-A1ZM          TCGA-FS-A1ZP 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZR          TCGA-FS-A1ZS          TCGA-FS-A1ZT 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZU          TCGA-FS-A1ZW          TCGA-FS-A1ZY 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZZ          TCGA-FW-A3I3          TCGA-GN-A261 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-GN-A262          TCGA-GN-A264          TCGA-GN-A265 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-GN-A266          TCGA-GN-A267          TCGA-GN-A268 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE"   "LOC649330 MUTATED" 
         TCGA-GN-A26A          TCGA-GN-A26D 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-D3-A1Q7          TCGA-D3-A3C6          TCGA-D3-A3CC 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-D3-A3MO          TCGA-D3-A3MV          TCGA-D9-A148 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-D9-A149          TCGA-D9-A1JW          TCGA-D9-A1JX 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1HV          TCGA-DA-A1HW          TCGA-DA-A1HY 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1I0          TCGA-DA-A1I1          TCGA-DA-A1I2 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1I4          TCGA-DA-A1I5          TCGA-DA-A1I7 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1I8          TCGA-DA-A1IA          TCGA-DA-A1IB 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A1IC          TCGA-DA-A3F2          TCGA-DA-A3F3 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-DA-A3F5          TCGA-DA-A3F8          TCGA-EE-A17X 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A17Z          TCGA-EE-A181          TCGA-EE-A182 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED"   "LOC649330 MUTATED" 
         TCGA-EE-A183          TCGA-EE-A185          TCGA-EE-A20B 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A20F          TCGA-EE-A20H          TCGA-EE-A29A 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29C          TCGA-EE-A29D          TCGA-EE-A29E 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29H          TCGA-EE-A29L          TCGA-EE-A29M 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29N          TCGA-EE-A29P          TCGA-EE-A29Q 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29R          TCGA-EE-A29S          TCGA-EE-A29T 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A29V          TCGA-EE-A29X          TCGA-EE-A2A0 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2A1          TCGA-EE-A2A2          TCGA-EE-A2A5 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2A6          TCGA-EE-A2GB          TCGA-EE-A2GC 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GD          TCGA-EE-A2GE          TCGA-EE-A2GH 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GI          TCGA-EE-A2GJ          TCGA-EE-A2GK 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GL          TCGA-EE-A2GM          TCGA-EE-A2GN 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GO          TCGA-EE-A2GP          TCGA-EE-A2GR 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2GS          TCGA-EE-A2GT          TCGA-EE-A2GU 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2M5          TCGA-EE-A2M6          TCGA-EE-A2M7 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2M8          TCGA-EE-A2MC          TCGA-EE-A2MD 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2ME          TCGA-EE-A2MG          TCGA-EE-A2MH 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2MI          TCGA-EE-A2MJ          TCGA-EE-A2MK 
"LOC649330 WILD-TYPE"   "LOC649330 MUTATED" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2ML          TCGA-EE-A2MM          TCGA-EE-A2MN 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A2MP          TCGA-EE-A2MQ          TCGA-EE-A2MR 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE"   "LOC649330 MUTATED" 
         TCGA-EE-A2MS          TCGA-EE-A2MT          TCGA-EE-A2MU 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A3AA          TCGA-EE-A3AB          TCGA-EE-A3AC 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE"   "LOC649330 MUTATED" 
         TCGA-EE-A3AD          TCGA-EE-A3AE          TCGA-EE-A3AF 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-EE-A3AG          TCGA-EE-A3AH          TCGA-ER-A19D 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-ER-A19F          TCGA-ER-A19J          TCGA-ER-A19L 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-ER-A19N          TCGA-ER-A1A1          TCGA-ER-A3ET 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1YW          TCGA-FS-A1YX          TCGA-FS-A1YY 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1Z0          TCGA-FS-A1Z3          TCGA-FS-A1Z4 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1Z7          TCGA-FS-A1ZA          TCGA-FS-A1ZB 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZD          TCGA-FS-A1ZE          TCGA-FS-A1ZF 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZG          TCGA-FS-A1ZH          TCGA-FS-A1ZJ 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZK          TCGA-FS-A1ZM          TCGA-FS-A1ZP 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZR          TCGA-FS-A1ZS          TCGA-FS-A1ZT 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZU          TCGA-FS-A1ZW          TCGA-FS-A1ZY 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-FS-A1ZZ          TCGA-FW-A3I3          TCGA-GN-A261 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-GN-A262          TCGA-GN-A264          TCGA-GN-A265 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
         TCGA-GN-A266          TCGA-GN-A267          TCGA-GN-A268 
  "LOC649330 MUTATED" "LOC649330 WILD-TYPE"   "LOC649330 MUTATED" 
         TCGA-GN-A26A          TCGA-GN-A26D 
"LOC649330 WILD-TYPE" "LOC649330 WILD-TYPE" 
[1] "hr=" "1.5"
D63V2, continuous
D63V3, binary
                     cls
clus                   0  1
  LOC649330 MUTATED    5 11
  LOC649330 WILD-TYPE 52 78
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  LOC649330 MUTATED      5   11
  LOC649330 WILD-TYPE   52   78
        clus
vv       LOC649330 MUTATED LOC649330 WILD-TYPE
  FEMALE                 5                  52
  MALE                  11                  78
                     vv
clus                   M0  M1 M1A M1B M1C
  LOC649330 MUTATED    13   0   0   0   0
  LOC649330 WILD-TYPE 111   2   1   1   2
D63V4, multiclass
                     vv
clus                  N0 N1 N1A N1B N2A N2B N2C N3 NX
  LOC649330 MUTATED    8  0   1   2   1   1   0  0  0
  LOC649330 WILD-TYPE 73  2   6  10   2   8   5 10  2
D63V5, multiclass
D63V6, continuous
                     vv
clus                  STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  LOC649330 MUTATED         1        0        2        3         0         1
  LOC649330 WILD-TYPE      16        9        9       15         7         7
                     vv
clus                  STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  LOC649330 MUTATED           0         0          0          2          2
  LOC649330 WILD-TYPE         7         5          6         14         14
                     vv
clus                  STAGE IV
  LOC649330 MUTATED          0
  LOC649330 WILD-TYPE        4
D63V7, multiclass

Clustering(64) Variable = PARM1 MUTATION ANALYSIS
D64V1, survival
                 sevent
clus2              0  1
  PARM1 MUTATED    3  7
  PARM1 WILD-TYPE 69 64
  PARM1 MUTATED PARM1 WILD-TYPE 
             10             133 
  PARM1 MUTATED PARM1 WILD-TYPE 
              7              64 
$`PARM1 MUTATED`
TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A29D TCGA-EE-A29P TCGA-EE-A29V TCGA-EE-A2GI 
       14.70         4.93        13.97        56.42        25.87        22.55 
TCGA-FS-A1ZA TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-GN-A266 
       27.68       101.26        74.73        10.09 

$`PARM1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 
      215.44        15.68        29.82         8.65        33.73        26.86 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E 
      109.64        78.87       168.26        63.32        47.84        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29R 
       32.19         2.56        44.35        18.58        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
       55.89       345.96        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       39.25        58.75        47.54        43.23       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
      101.95        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      136.44        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
        7.76        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       32.71        47.38        23.93        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      120.46       117.93        84.72        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  PARM1 MUTATED PARM1 WILD-TYPE 
           4.93            0.20 
  PARM1 MUTATED PARM1 WILD-TYPE 
         101.26          345.96 
  PARM1 MUTATED PARM1 WILD-TYPE 
          24.21           48.59 
[1] "4.9 - 101.3 (24.2)" "0.2 - 346.0 (48.6)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"PARM1 WILD-TYPE"   "PARM1 MUTATED" "PARM1 WILD-TYPE"   "PARM1 MUTATED" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PARM1 WILD-TYPE"   "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE"   "PARM1 MUTATED" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
  "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE"   "PARM1 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "PARM1 MUTATED"   "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE"   "PARM1 MUTATED" "PARM1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"PARM1 WILD-TYPE"   "PARM1 MUTATED" "PARM1 WILD-TYPE"   "PARM1 MUTATED" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PARM1 WILD-TYPE"   "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE"   "PARM1 MUTATED" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
  "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE"   "PARM1 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "PARM1 MUTATED"   "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE"   "PARM1 MUTATED" "PARM1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"PARM1 WILD-TYPE"   "PARM1 MUTATED" "PARM1 WILD-TYPE"   "PARM1 MUTATED" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"PARM1 WILD-TYPE"   "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE"   "PARM1 MUTATED" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
  "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE"   "PARM1 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "PARM1 MUTATED"   "PARM1 MUTATED" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE"   "PARM1 MUTATED" "PARM1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"PARM1 WILD-TYPE" "PARM1 WILD-TYPE" "PARM1 WILD-TYPE" 
[1] "hr=" "2.7"
D64V2, continuous
D64V3, binary
                 cls
clus               0  1
  PARM1 MUTATED    4  7
  PARM1 WILD-TYPE 53 82
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PARM1 MUTATED      4    7
  PARM1 WILD-TYPE   53   82
        clus
vv       PARM1 MUTATED PARM1 WILD-TYPE
  FEMALE             4              53
  MALE               7              82
                 vv
clus               M0  M1 M1A M1B M1C
  PARM1 MUTATED     9   0   0   0   0
  PARM1 WILD-TYPE 115   2   1   1   2
D64V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  PARM1 MUTATED    3  0   0   3   0   0   2  1  0
  PARM1 WILD-TYPE 78  2   7   9   3   9   3  9  2
D64V5, multiclass
D64V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PARM1 MUTATED         0        1        0        1         0         0
  PARM1 WILD-TYPE      17        8       11       17         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  PARM1 MUTATED           1         1          0          1          4        0
  PARM1 WILD-TYPE         6         4          6         15         12        4
D64V7, multiclass

Clustering(65) Variable = CCK MUTATION ANALYSIS
D65V1, survival
               sevent
clus2            0  1
  CCK MUTATED    5  0
  CCK WILD-TYPE 67 71
  CCK MUTATED CCK WILD-TYPE 
            5           138 
  CCK MUTATED CCK WILD-TYPE 
            0            71 
$`CCK MUTATED`
TCGA-EE-A29E TCGA-EE-A29R TCGA-EE-A2GJ TCGA-FS-A1ZT TCGA-GN-A265 
       39.62        14.47        89.33        53.16        84.72 

$`CCK WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       47.84        13.97        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       56.42        37.35        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK 
       43.23       314.53       135.91       182.01        22.55        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       55.00        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU 
       23.93       101.26        74.73        11.41       148.77        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        10.09        64.41        62.76        32.48        39.58 

  CCK MUTATED CCK WILD-TYPE 
        14.47          0.20 
  CCK MUTATED CCK WILD-TYPE 
        89.33        345.96 
  CCK MUTATED CCK WILD-TYPE 
        53.16         47.54 
[1] "14.5 - 89.3 (53.2)" "0.2 - 346.0 (47.5)"
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
  "CCK MUTATED" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"CCK WILD-TYPE" "CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
  "CCK MUTATED" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"CCK WILD-TYPE" "CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
  "CCK MUTATED" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"CCK WILD-TYPE" "CCK WILD-TYPE"   "CCK MUTATED" "CCK WILD-TYPE" "CCK WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"CCK WILD-TYPE" "CCK WILD-TYPE" "CCK WILD-TYPE" 
[1] "hr="     "2.6e+07"
D65V2, continuous
D65V3, binary
               cls
clus             0  1
  CCK MUTATED    1  4
  CCK WILD-TYPE 56 85
[1] "tbl2"
               cls
clus            [,1] [,2]
  CCK MUTATED      1    4
  CCK WILD-TYPE   56   85
        clus
vv       CCK MUTATED CCK WILD-TYPE
  FEMALE           1            56
  MALE             4            85
               vv
clus             M0  M1 M1A M1B M1C
  CCK MUTATED     4   0   0   0   0
  CCK WILD-TYPE 120   2   1   1   2
D65V4, multiclass
               vv
clus            N0 N1 N1A N1B N2A N2B N2C N3 NX
  CCK MUTATED    1  0   0   3   0   0   0  0  0
  CCK WILD-TYPE 80  2   7   9   3   9   5 10  2
D65V5, multiclass
D65V6, continuous
               vv
clus            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CCK MUTATED         0        1        0        0         0         0
  CCK WILD-TYPE      17        8       11       18         7         8
               vv
clus            STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  CCK MUTATED           0         1          0          1          1        0
  CCK WILD-TYPE         7         4          6         15         15        4
D65V7, multiclass

Clustering(66) Variable = ZFP106 MUTATION ANALYSIS
D66V1, survival
                  sevent
clus2               0  1
  ZFP106 MUTATED    3  2
  ZFP106 WILD-TYPE 69 69
  ZFP106 MUTATED ZFP106 WILD-TYPE 
               5              138 
  ZFP106 MUTATED ZFP106 WILD-TYPE 
               2               69 
$`ZFP106 MUTATED`
TCGA-EE-A29L TCGA-EE-A2GR TCGA-EE-A2MJ TCGA-EE-A2MS TCGA-FS-A1ZM 
        2.56        14.30        96.23       136.44       101.26 

$`ZFP106 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N 
       47.84        13.97        39.62        32.19        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
       16.96       204.62       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       27.06        27.02         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        62.76        32.48        39.58 

  ZFP106 MUTATED ZFP106 WILD-TYPE 
            2.56             0.20 
  ZFP106 MUTATED ZFP106 WILD-TYPE 
          136.44           345.96 
  ZFP106 MUTATED ZFP106 WILD-TYPE 
           96.23            47.54 
[1] "2.6 - 136.4 (96.2)" "0.2 - 346.0 (47.5)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "ZFP106 MUTATED" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "ZFP106 MUTATED" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE"   "ZFP106 MUTATED" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE"   "ZFP106 MUTATED" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
  "ZFP106 MUTATED" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "ZFP106 MUTATED" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "ZFP106 MUTATED" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE"   "ZFP106 MUTATED" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE"   "ZFP106 MUTATED" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
  "ZFP106 MUTATED" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "ZFP106 MUTATED" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "ZFP106 MUTATED" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE"   "ZFP106 MUTATED" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE"   "ZFP106 MUTATED" "ZFP106 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
  "ZFP106 MUTATED" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" "ZFP106 WILD-TYPE" 
[1] "hr=" "1.2"
D66V2, continuous
D66V3, binary
                  cls
clus                0  1
  ZFP106 MUTATED    0  5
  ZFP106 WILD-TYPE 57 84
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ZFP106 MUTATED      0    5
  ZFP106 WILD-TYPE   57   84
        clus
vv       ZFP106 MUTATED ZFP106 WILD-TYPE
  FEMALE              0               57
  MALE                5               84
                  vv
clus                M0  M1 M1A M1B M1C
  ZFP106 MUTATED     5   0   0   0   0
  ZFP106 WILD-TYPE 119   2   1   1   2
D66V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  ZFP106 MUTATED    3  0   0   0   0   0   1  1  0
  ZFP106 WILD-TYPE 78  2   7  12   3   9   4  9  2
D66V5, multiclass
D66V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  ZFP106 MUTATED         0        0        0        3         0         0
  ZFP106 WILD-TYPE      17        9       11       15         7         8
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  ZFP106 MUTATED           0         1          0          0          1
  ZFP106 WILD-TYPE         7         4          6         16         15
                  vv
clus               STAGE IV
  ZFP106 MUTATED          0
  ZFP106 WILD-TYPE        4
D66V7, multiclass

Clustering(67) Variable = UGT2B15 MUTATION ANALYSIS
D67V1, survival
                   sevent
clus2                0  1
  UGT2B15 MUTATED    7  7
  UGT2B15 WILD-TYPE 65 64
  UGT2B15 MUTATED UGT2B15 WILD-TYPE 
               14               129 
  UGT2B15 MUTATED UGT2B15 WILD-TYPE 
                7                64 
$`UGT2B15 MUTATED`
TCGA-DA-A1HY TCGA-DA-A1I5 TCGA-DA-A1IC TCGA-EE-A185 TCGA-EE-A20H TCGA-EE-A29D 
      117.17       107.34        68.09         4.93       168.26        13.97 
TCGA-EE-A2GD TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2MR 
      314.53        21.67       129.24       103.17        96.23       103.56 
TCGA-EE-A3AC TCGA-EE-A3AD 
       25.84         3.68 

$`UGT2B15 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I0 
       49.74         2.70         6.38        48.89        36.03        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      194.83       176.55        35.93        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       23.44        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F 
        8.65        33.73        14.70        26.86       109.64        78.87 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       63.32        47.84        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       58.75        47.54        43.23       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M7 
       13.87        14.30        55.59        19.56        67.13        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI 
       19.76        61.51        47.28       103.27        16.96       204.62 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AE 
      136.44        41.59        53.26         4.24       122.73        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  UGT2B15 MUTATED UGT2B15 WILD-TYPE 
             3.68              0.20 
  UGT2B15 MUTATED UGT2B15 WILD-TYPE 
           314.53            345.96 
  UGT2B15 MUTATED UGT2B15 WILD-TYPE 
            99.70             47.38 
[1] "3.7 - 314.5 (99.7)" "0.2 - 346.0 (47.4)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
  "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "UGT2B15 MUTATED"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
  "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
  "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "UGT2B15 MUTATED"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
  "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
  "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "UGT2B15 MUTATED"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE"   "UGT2B15 MUTATED" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
  "UGT2B15 MUTATED" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" "UGT2B15 WILD-TYPE" 
[1] "hr=" "1.3"
D67V2, continuous
D67V3, binary
                   cls
clus                 0  1
  UGT2B15 MUTATED    3 11
  UGT2B15 WILD-TYPE 54 78
[1] "tbl2"
                   cls
clus                [,1] [,2]
  UGT2B15 MUTATED      3   11
  UGT2B15 WILD-TYPE   54   78
        clus
vv       UGT2B15 MUTATED UGT2B15 WILD-TYPE
  FEMALE               3                54
  MALE                11                78
                   vv
clus                 M0  M1 M1A M1B M1C
  UGT2B15 MUTATED    11   0   0   0   1
  UGT2B15 WILD-TYPE 113   2   1   1   1
D67V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  UGT2B15 MUTATED    8  0   0   1   0   0   1  2  0
  UGT2B15 WILD-TYPE 73  2   7  11   3   9   4  8  2
D67V5, multiclass
D67V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  UGT2B15 MUTATED         5        0        0        1         0         1
  UGT2B15 WILD-TYPE      12        9       11       17         7         7
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  UGT2B15 MUTATED           0         0          0          1          3
  UGT2B15 WILD-TYPE         7         5          6         15         13
                   vv
clus                STAGE IV
  UGT2B15 MUTATED          1
  UGT2B15 WILD-TYPE        3
D67V7, multiclass

Clustering(68) Variable = DSG1 MUTATION ANALYSIS
D68V1, survival
                sevent
clus2             0  1
  DSG1 MUTATED   11 11
  DSG1 WILD-TYPE 61 60
  DSG1 MUTATED DSG1 WILD-TYPE 
            22            121 
  DSG1 MUTATED DSG1 WILD-TYPE 
            11             60 
$`DSG1 MUTATED`
TCGA-D3-A3MV TCGA-DA-A1HV TCGA-DA-A3F8 TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 
       21.47        48.89        15.68        33.73        14.70         4.93 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GO 
       47.84        13.97        39.62        39.25        43.23       101.95 
TCGA-EE-A2M5 TCGA-EE-A2MJ TCGA-EE-A2MS TCGA-EE-A3AA TCGA-EE-A3AE TCGA-FS-A1ZA 
       21.67        96.23       136.44         4.24        26.73        27.68 
TCGA-FS-A1ZP TCGA-FS-A1ZW TCGA-GN-A266 TCGA-GN-A26A 
       74.73        49.48        10.09        32.48 

$`DSG1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
        2.70         6.38        36.03       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17X 
       23.44        68.09        28.60        10.49       215.44        29.82 
TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
        8.65        26.86       109.64        78.87       168.26        63.32 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       78.94        24.43        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      182.01        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
       90.94        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.17        16.96       204.62       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU 
       47.54       248.61        43.23       103.56        41.59        53.26 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73        25.84         3.68        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
       28.08         7.76        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZR 
        9.70        32.71        47.38        23.93       101.26        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
      148.77        53.16        26.56        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        64.41        62.76 
TCGA-GN-A26D 
       39.58 

  DSG1 MUTATED DSG1 WILD-TYPE 
          4.24           0.20 
  DSG1 MUTATED DSG1 WILD-TYPE 
        136.44         345.96 
  DSG1 MUTATED DSG1 WILD-TYPE 
        33.105         53.160 
[1] "4.2 - 136.4 (33.1)" "0.2 - 346.0 (53.2)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
  "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "DSG1 MUTATED"   "DSG1 MUTATED" "DSG1 WILD-TYPE"   "DSG1 MUTATED" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
  "DSG1 MUTATED"   "DSG1 MUTATED"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
  "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "DSG1 MUTATED"   "DSG1 MUTATED" "DSG1 WILD-TYPE"   "DSG1 MUTATED" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
  "DSG1 MUTATED"   "DSG1 MUTATED"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
  "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "DSG1 MUTATED"   "DSG1 MUTATED" "DSG1 WILD-TYPE"   "DSG1 MUTATED" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
  "DSG1 MUTATED"   "DSG1 MUTATED"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" "DSG1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"DSG1 WILD-TYPE" "DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"DSG1 WILD-TYPE"   "DSG1 MUTATED" "DSG1 WILD-TYPE" 
[1] "hr=" "1.6"
D68V2, continuous
D68V3, binary
                cls
clus              0  1
  DSG1 MUTATED    9 13
  DSG1 WILD-TYPE 48 76
[1] "tbl2"
                cls
clus             [,1] [,2]
  DSG1 MUTATED      9   13
  DSG1 WILD-TYPE   48   76
        clus
vv       DSG1 MUTATED DSG1 WILD-TYPE
  FEMALE            9             48
  MALE             13             76
                vv
clus              M0  M1 M1A M1B M1C
  DSG1 MUTATED    20   0   0   0   0
  DSG1 WILD-TYPE 104   2   1   1   2
D68V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  DSG1 MUTATED   10  0   2   3   1   2   1  1  0
  DSG1 WILD-TYPE 71  2   5   9   2   7   4  9  2
D68V5, multiclass
D68V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  DSG1 MUTATED         1        1        2        5         0         1
  DSG1 WILD-TYPE      16        8        9       13         7         7
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DSG1 MUTATED           0         0          1          6          3        0
  DSG1 WILD-TYPE         7         5          5         10         13        4
D68V7, multiclass

Clustering(69) Variable = ARL16 MUTATION ANALYSIS
D69V1, survival
                 sevent
clus2              0  1
  ARL16 MUTATED    3  1
  ARL16 WILD-TYPE 69 70
  ARL16 MUTATED ARL16 WILD-TYPE 
              4             139 
  ARL16 MUTATED ARL16 WILD-TYPE 
              1              70 
$`ARL16 MUTATED`
TCGA-EE-A29A TCGA-EE-A2GU TCGA-EE-A2MS TCGA-FS-A1ZT 
       63.32        67.13       136.44        53.16 

$`ARL16 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29C 
       26.86         4.93       109.64        78.87       168.26        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        14.30        55.59        19.56        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU 
       47.54       248.61        43.23       103.56        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU 
       23.93       101.26        74.73        11.41       148.77        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  ARL16 MUTATED ARL16 WILD-TYPE 
          53.16            0.20 
  ARL16 MUTATED ARL16 WILD-TYPE 
         136.44          345.96 
  ARL16 MUTATED ARL16 WILD-TYPE 
         65.225          47.380 
[1] "53.2 - 136.4 (65.2)" "0.2 - 346.0 (47.4)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE"   "ARL16 MUTATED" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE"   "ARL16 MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE"   "ARL16 MUTATED" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
  "ARL16 MUTATED" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE"   "ARL16 MUTATED" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE"   "ARL16 MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE"   "ARL16 MUTATED" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
  "ARL16 MUTATED" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE"   "ARL16 MUTATED" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE"   "ARL16 MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE"   "ARL16 MUTATED" "ARL16 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
  "ARL16 MUTATED" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"ARL16 WILD-TYPE" "ARL16 WILD-TYPE" "ARL16 WILD-TYPE" 
[1] "hr=" "2.5"
D69V2, continuous
D69V3, binary
                 cls
clus               0  1
  ARL16 MUTATED    1  3
  ARL16 WILD-TYPE 56 86
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ARL16 MUTATED      1    3
  ARL16 WILD-TYPE   56   86
        clus
vv       ARL16 MUTATED ARL16 WILD-TYPE
  FEMALE             1              56
  MALE               3              86
                 vv
clus               M0  M1 M1A M1B M1C
  ARL16 MUTATED     4   0   0   0   0
  ARL16 WILD-TYPE 120   2   1   1   2
D69V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  ARL16 MUTATED    2  0   1   1   0   0   0  0  0
  ARL16 WILD-TYPE 79  2   6  11   3   9   5 10  2
D69V5, multiclass
D69V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  ARL16 MUTATED         0        1        0        1         0         0
  ARL16 WILD-TYPE      17        8       11       17         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  ARL16 MUTATED           0         1          1          0          0        0
  ARL16 WILD-TYPE         7         4          5         16         16        4
D69V7, multiclass

Clustering(70) Variable = VEGFC MUTATION ANALYSIS
D70V1, survival
                 sevent
clus2              0  1
  VEGFC MUTATED    9  5
  VEGFC WILD-TYPE 63 66
  VEGFC MUTATED VEGFC WILD-TYPE 
             14             129 
  VEGFC MUTATED VEGFC WILD-TYPE 
              5              66 
$`VEGFC MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A3MV TCGA-D9-A1JW TCGA-DA-A1HW TCGA-EE-A20F TCGA-EE-A2A6 
      121.22        21.47         2.70        36.03        78.87        58.75 
TCGA-EE-A2GC TCGA-EE-A2GJ TCGA-EE-A2MJ TCGA-EE-A3AA TCGA-EE-A3AE TCGA-FS-A1Z3 
       43.23        89.33        96.23         4.24        26.73        20.91 
TCGA-FS-A1ZA TCGA-FS-A1ZZ 
       27.68        27.02 

$`VEGFC WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JX 
       58.03        71.24         9.30       148.31        49.74         6.38 
TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
       48.89       117.17        20.38       194.83       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC 
      107.34        61.18        53.92        65.92        23.44        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       28.60        10.49       215.44        15.68        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H 
       33.73        14.70        26.86         4.93       109.64       168.26 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
       63.32        47.84        13.97        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       39.25        47.54       314.53       135.91       182.01        22.55 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       14.30        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
       16.96       204.62       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73        25.84         3.68        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 
       80.32       216.92        48.59       228.59       202.62        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
        7.76        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 
      148.77        53.16        26.56        49.48        27.06         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  VEGFC MUTATED VEGFC WILD-TYPE 
            2.7             0.2 
  VEGFC MUTATED VEGFC WILD-TYPE 
         121.22          345.96 
  VEGFC MUTATED VEGFC WILD-TYPE 
         31.855          48.590 
[1] "2.7 - 121.2 (31.9)" "0.2 - 346.0 (48.6)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"VEGFC WILD-TYPE"   "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE"   "VEGFC MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "VEGFC MUTATED" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"VEGFC WILD-TYPE" "VEGFC WILD-TYPE" "VEGFC WILD-TYPE" 
[1] "hr=" "1"  
D70V2, continuous
D70V3, binary
                 cls
clus               0  1
  VEGFC MUTATED    7  7
  VEGFC WILD-TYPE 50 82
[1] "tbl2"
                 cls
clus              [,1] [,2]
  VEGFC MUTATED      7    7
  VEGFC WILD-TYPE   50   82
        clus
vv       VEGFC MUTATED VEGFC WILD-TYPE
  FEMALE             7              50
  MALE               7              82
                 vv
clus               M0  M1 M1A M1B M1C
  VEGFC MUTATED    12   0   0   0   0
  VEGFC WILD-TYPE 112   2   1   1   2
D70V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  VEGFC MUTATED    8  0   0   1   2   0   1  0  0
  VEGFC WILD-TYPE 73  2   7  11   1   9   4 10  2
D70V5, multiclass
D70V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  VEGFC MUTATED         0        3        1        2         0         2
  VEGFC WILD-TYPE      17        6       10       16         7         6
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  VEGFC MUTATED           0         0          0          3          0        0
  VEGFC WILD-TYPE         7         5          6         13         16        4
D70V7, multiclass

Clustering(71) Variable = PSG4 MUTATION ANALYSIS
D71V1, survival
                sevent
clus2             0  1
  PSG4 MUTATED    8  7
  PSG4 WILD-TYPE 64 64
  PSG4 MUTATED PSG4 WILD-TYPE 
            15            128 
  PSG4 MUTATED PSG4 WILD-TYPE 
             7             64 
$`PSG4 MUTATED`
TCGA-EE-A185 TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29M TCGA-EE-A2GL 
        4.93       168.26        13.97        39.62        44.35        55.00 
TCGA-EE-A2GO TCGA-EE-A2MD TCGA-EE-A2MM TCGA-EE-A2MR TCGA-EE-A3AC TCGA-ER-A19F 
      101.95        47.28       167.87       103.56        25.84        26.37 
TCGA-FS-A1Z3 TCGA-FS-A1ZS TCGA-FS-A1ZW 
       20.91       148.77        49.48 

$`PSG4 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H 
       26.86       109.64        78.87        63.32        47.84        32.19 
TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
        2.56        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       39.25        58.75        47.54        43.23       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        22.55        89.33        54.71        75.48        90.94 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
      129.24        28.80        19.76        61.51       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN 
       16.96       204.62        96.23       144.76       203.01        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       12.59         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
      216.92        48.59       228.59       202.62        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       53.16        26.56        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  PSG4 MUTATED PSG4 WILD-TYPE 
          4.93           0.20 
  PSG4 MUTATED PSG4 WILD-TYPE 
        168.26         345.96 
  PSG4 MUTATED PSG4 WILD-TYPE 
         47.28          47.69 
[1] "4.9 - 168.3 (47.3)" "0.2 - 346.0 (47.7)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PSG4 WILD-TYPE"   "PSG4 MUTATED"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PSG4 WILD-TYPE"   "PSG4 MUTATED"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PSG4 WILD-TYPE"   "PSG4 MUTATED"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "PSG4 MUTATED" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE"   "PSG4 MUTATED" "PSG4 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PSG4 WILD-TYPE" "PSG4 WILD-TYPE" "PSG4 WILD-TYPE" 
[1] "hr=" "1"  
D71V2, continuous
D71V3, binary
                cls
clus              0  1
  PSG4 MUTATED    6  9
  PSG4 WILD-TYPE 51 80
[1] "tbl2"
                cls
clus             [,1] [,2]
  PSG4 MUTATED      6    9
  PSG4 WILD-TYPE   51   80
        clus
vv       PSG4 MUTATED PSG4 WILD-TYPE
  FEMALE            6             51
  MALE              9             80
                vv
clus              M0  M1 M1A M1B M1C
  PSG4 MUTATED    13   0   0   0   0
  PSG4 WILD-TYPE 111   2   1   1   2
D71V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  PSG4 MUTATED    9  0   1   2   0   0   0  1  0
  PSG4 WILD-TYPE 72  2   6  10   3   9   5  9  2
D71V5, multiclass
D71V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PSG4 MUTATED         3        0        1        3         1         0
  PSG4 WILD-TYPE      14        9       10       15         6         8
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  PSG4 MUTATED           0         0          0          2          2        0
  PSG4 WILD-TYPE         7         5          6         14         14        4
D71V7, multiclass

Clustering(72) Variable = DEFB119 MUTATION ANALYSIS
D72V1, survival
                   sevent
clus2                0  1
  DEFB119 MUTATED    2  3
  DEFB119 WILD-TYPE 70 68
  DEFB119 MUTATED DEFB119 WILD-TYPE 
                5               138 
  DEFB119 MUTATED DEFB119 WILD-TYPE 
                3                68 
$`DEFB119 MUTATED`
TCGA-DA-A1I7 TCGA-EE-A183 TCGA-EE-A3AA TCGA-ER-A19D TCGA-FS-A1ZZ 
       61.18        26.86         4.24        12.59        27.02 

$`DEFB119 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 
       20.38       194.83       176.55        35.93       107.34        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 
       15.68        29.82         8.65        33.73        14.70         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       14.30        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
       53.26       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
       23.47       138.77        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       49.48        27.06         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        62.76        32.48        39.58 

  DEFB119 MUTATED DEFB119 WILD-TYPE 
             4.24              0.20 
  DEFB119 MUTATED DEFB119 WILD-TYPE 
            61.18            345.96 
  DEFB119 MUTATED DEFB119 WILD-TYPE 
           26.860            48.215 
[1] "4.2 - 61.2 (26.9)"  "0.2 - 346.0 (48.2)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"DEFB119 WILD-TYPE"   "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "DEFB119 MUTATED" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" "DEFB119 WILD-TYPE" 
[1] "hr=" "2.9"
D72V2, continuous
D72V3, binary
                   cls
clus                 0  1
  DEFB119 MUTATED    2  4
  DEFB119 WILD-TYPE 55 85
[1] "tbl2"
                   cls
clus                [,1] [,2]
  DEFB119 MUTATED      2    4
  DEFB119 WILD-TYPE   55   85
        clus
vv       DEFB119 MUTATED DEFB119 WILD-TYPE
  FEMALE               2                55
  MALE                 4                85
                   vv
clus                 M0  M1 M1A M1B M1C
  DEFB119 MUTATED     4   0   0   0   0
  DEFB119 WILD-TYPE 120   2   1   1   2
D72V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  DEFB119 MUTATED    3  0   0   0   0   1   0  0  0
  DEFB119 WILD-TYPE 78  2   7  12   3   8   5 10  2
D72V5, multiclass
D72V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  DEFB119 MUTATED         1        0        1        0         0         1
  DEFB119 WILD-TYPE      16        9       10       18         7         7
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  DEFB119 MUTATED           0         0          0          1          0
  DEFB119 WILD-TYPE         7         5          6         15         16
                   vv
clus                STAGE IV
  DEFB119 MUTATED          0
  DEFB119 WILD-TYPE        4
D72V7, multiclass

Clustering(73) Variable = KLHL4 MUTATION ANALYSIS
D73V1, survival
                 sevent
clus2              0  1
  KLHL4 MUTATED   10  4
  KLHL4 WILD-TYPE 62 67
  KLHL4 MUTATED KLHL4 WILD-TYPE 
             14             129 
  KLHL4 MUTATED KLHL4 WILD-TYPE 
              4              67 
$`KLHL4 MUTATED`
TCGA-DA-A1IC TCGA-DA-A3F5 TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29R 
       68.09       215.44        47.84        32.19         2.56        14.47 
TCGA-EE-A2GD TCGA-EE-A2GO TCGA-EE-A2GU TCGA-EE-A2MR TCGA-EE-A3AC TCGA-ER-A19D 
      314.53       101.95        67.13       103.56        25.84        12.59 
TCGA-GN-A262 TCGA-GN-A266 
      120.46        10.09 

$`KLHL4 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 
       53.92        65.92        23.44        28.60        10.49        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29E 
      109.64        78.87       168.26        63.32        13.97        39.62 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T 
       44.35        18.58        56.42        37.35        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       58.75        47.54        43.23       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP 
       89.33        54.71        55.00        75.48        90.94        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       14.30        55.59        19.56        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 
       27.02         0.20        76.41       117.93        84.72        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  KLHL4 MUTATED KLHL4 WILD-TYPE 
           2.56            0.20 
  KLHL4 MUTATED KLHL4 WILD-TYPE 
         314.53          345.96 
  KLHL4 MUTATED KLHL4 WILD-TYPE 
         57.485          47.540 
[1] "2.6 - 314.5 (57.5)" "0.2 - 346.0 (47.5)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
  "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
  "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
  "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE"   "KLHL4 MUTATED" "KLHL4 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" "KLHL4 WILD-TYPE" 
[1] "hr=" "2.1"
D73V2, continuous
D73V3, binary
                 cls
clus               0  1
  KLHL4 MUTATED    7  7
  KLHL4 WILD-TYPE 50 82
[1] "tbl2"
                 cls
clus              [,1] [,2]
  KLHL4 MUTATED      7    7
  KLHL4 WILD-TYPE   50   82
        clus
vv       KLHL4 MUTATED KLHL4 WILD-TYPE
  FEMALE             7              50
  MALE               7              82
                 vv
clus               M0  M1 M1A M1B M1C
  KLHL4 MUTATED    11   0   0   0   0
  KLHL4 WILD-TYPE 113   2   1   1   2
D73V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  KLHL4 MUTATED    7  0   0   1   0   0   1  2  0
  KLHL4 WILD-TYPE 74  2   7  11   3   9   4  8  2
D73V5, multiclass
D73V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  KLHL4 MUTATED         1        2        2        1         0         1
  KLHL4 WILD-TYPE      16        7        9       17         7         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  KLHL4 MUTATED           0         0          0          1          3        0
  KLHL4 WILD-TYPE         7         5          6         15         13        4
D73V7, multiclass

Clustering(74) Variable = EIF3D MUTATION ANALYSIS
D74V1, survival
                 sevent
clus2              0  1
  EIF3D MUTATED    1  2
  EIF3D WILD-TYPE 71 69
  EIF3D MUTATED EIF3D WILD-TYPE 
              3             140 
  EIF3D MUTATED EIF3D WILD-TYPE 
              2              69 
$`EIF3D MUTATED`
TCGA-EE-A29L TCGA-EE-A2A5 TCGA-EE-A2GT 
        2.56        39.25        19.56 

$`EIF3D WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N 
       47.84        13.97        39.62        32.19        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB 
       17.92        46.82        78.94        24.43        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       14.30        55.59        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  EIF3D MUTATED EIF3D WILD-TYPE 
           2.56            0.20 
  EIF3D MUTATED EIF3D WILD-TYPE 
          39.25          345.96 
  EIF3D MUTATED EIF3D WILD-TYPE 
         19.560          48.215 
[1] "2.6 - 39.2 (19.6)"  "0.2 - 346.0 (48.2)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "EIF3D MUTATED" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"EIF3D WILD-TYPE"   "EIF3D MUTATED" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE"   "EIF3D MUTATED" "EIF3D WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "EIF3D MUTATED" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"EIF3D WILD-TYPE"   "EIF3D MUTATED" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE"   "EIF3D MUTATED" "EIF3D WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "EIF3D MUTATED" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"EIF3D WILD-TYPE"   "EIF3D MUTATED" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE"   "EIF3D MUTATED" "EIF3D WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"EIF3D WILD-TYPE" "EIF3D WILD-TYPE" "EIF3D WILD-TYPE" 
[1] "hr=" "4"  
D74V2, continuous
D74V3, binary
                 cls
clus               0  1
  EIF3D MUTATED    0  3
  EIF3D WILD-TYPE 57 86
[1] "tbl2"
                 cls
clus              [,1] [,2]
  EIF3D MUTATED      0    3
  EIF3D WILD-TYPE   57   86
        clus
vv       EIF3D MUTATED EIF3D WILD-TYPE
  FEMALE             0              57
  MALE               3              86
                 vv
clus               M0  M1 M1A M1B M1C
  EIF3D MUTATED     3   0   0   0   0
  EIF3D WILD-TYPE 121   2   1   1   2
D74V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  EIF3D MUTATED    2  0   0   0   0   0   0  1  0
  EIF3D WILD-TYPE 79  2   7  12   3   9   5  9  2
D74V5, multiclass
D74V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  EIF3D MUTATED         0        0        1        0         1         0
  EIF3D WILD-TYPE      17        9       10       18         6         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  EIF3D MUTATED           0         0          0          0          1        0
  EIF3D WILD-TYPE         7         5          6         16         15        4
D74V7, multiclass

Clustering(75) Variable = OR2W1 MUTATION ANALYSIS
D75V1, survival
                 sevent
clus2              0  1
  OR2W1 MUTATED    7  5
  OR2W1 WILD-TYPE 65 66
  OR2W1 MUTATED OR2W1 WILD-TYPE 
             12             131 
  OR2W1 MUTATED OR2W1 WILD-TYPE 
              5              66 
$`OR2W1 MUTATED`
TCGA-DA-A1HV TCGA-EE-A182 TCGA-EE-A29D TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2GD 
       48.89        14.70        13.97        78.94        24.43       314.53 
TCGA-EE-A2GO TCGA-EE-A2M5 TCGA-EE-A2MD TCGA-EE-A3AF TCGA-ER-A3ET TCGA-FS-A1ZW 
      101.95        21.67        47.28        13.81        80.32        49.48 

$`OR2W1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        33.73        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E 
      109.64        78.87       168.26        63.32        47.84        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GH 
       39.25        58.75        47.54        43.23       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
       13.87        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       28.80        19.76        61.51       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG 
        4.24       122.73        25.84         3.68        26.73        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       79.99       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY 
       74.73        11.41       148.77        53.16        26.56        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  OR2W1 MUTATED OR2W1 WILD-TYPE 
          13.81            0.20 
  OR2W1 MUTATED OR2W1 WILD-TYPE 
         314.53          345.96 
  OR2W1 MUTATED OR2W1 WILD-TYPE 
         48.085          47.540 
[1] "13.8 - 314.5 (48.1)" "0.2 - 346.0 (47.5)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE"   "OR2W1 MUTATED" "OR2W1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" "OR2W1 WILD-TYPE" 
[1] "hr=" "1.2"
D75V2, continuous
D75V3, binary
                 cls
clus               0  1
  OR2W1 MUTATED    6  6
  OR2W1 WILD-TYPE 51 83
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2W1 MUTATED      6    6
  OR2W1 WILD-TYPE   51   83
        clus
vv       OR2W1 MUTATED OR2W1 WILD-TYPE
  FEMALE             6              51
  MALE               6              83
                 vv
clus               M0  M1 M1A M1B M1C
  OR2W1 MUTATED    11   0   0   0   0
  OR2W1 WILD-TYPE 113   2   1   1   2
D75V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  OR2W1 MUTATED    5  0   2   3   0   1   0  0  0
  OR2W1 WILD-TYPE 76  2   5   9   3   8   5 10  2
D75V5, multiclass
D75V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OR2W1 MUTATED         1        0        1        2         0         1
  OR2W1 WILD-TYPE      16        9       10       16         7         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  OR2W1 MUTATED           0         0          1          3          2        0
  OR2W1 WILD-TYPE         7         5          5         13         14        4
D75V7, multiclass

Clustering(76) Variable = OR4N2 MUTATION ANALYSIS
D76V1, survival
                 sevent
clus2              0  1
  OR4N2 MUTATED   10  6
  OR4N2 WILD-TYPE 62 65
  OR4N2 MUTATED OR4N2 WILD-TYPE 
             16             127 
  OR4N2 MUTATED OR4N2 WILD-TYPE 
              6              65 
$`OR4N2 MUTATED`
TCGA-DA-A1I0 TCGA-DA-A3F8 TCGA-EE-A29E TCGA-EE-A29M TCGA-EE-A29S TCGA-EE-A29V 
       20.38        15.68        39.62        44.35        55.89        25.87 
TCGA-EE-A2GC TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GR TCGA-EE-A2MD TCGA-EE-A2MJ 
       43.23        22.55        89.33        14.30        47.28        96.23 
TCGA-EE-A2MT TCGA-ER-A19F TCGA-GN-A262 TCGA-GN-A266 
       41.59        26.37       120.46        10.09 

$`OR4N2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
       32.19         2.56        18.58        56.42        37.35        14.47 
TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
      345.96        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GK 
       58.75        47.54       314.53       135.91       182.01        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS 
       55.00        75.48        90.94       101.95        13.87        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK 
       61.51       103.27       103.17        16.96       204.62       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
      136.44        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J 
       26.73        13.81        23.47       138.77        12.59         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       76.41       117.93        84.72        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  OR4N2 MUTATED OR4N2 WILD-TYPE 
          10.09            0.20 
  OR4N2 MUTATED OR4N2 WILD-TYPE 
         120.46          345.96 
  OR4N2 MUTATED OR4N2 WILD-TYPE 
         40.605          48.890 
[1] "10.1 - 120.5 (40.6)" "0.2 - 346.0 (48.9)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "OR4N2 MUTATED"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "OR4N2 MUTATED"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "OR4N2 MUTATED"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE"   "OR4N2 MUTATED" "OR4N2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" "OR4N2 WILD-TYPE" 
[1] "hr=" "1.1"
D76V2, continuous
D76V3, binary
                 cls
clus               0  1
  OR4N2 MUTATED    2 15
  OR4N2 WILD-TYPE 55 74
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4N2 MUTATED      2   15
  OR4N2 WILD-TYPE   55   74
        clus
vv       OR4N2 MUTATED OR4N2 WILD-TYPE
  FEMALE             2              55
  MALE              15              74
                 vv
clus               M0  M1 M1A M1B M1C
  OR4N2 MUTATED    13   0   1   0   0
  OR4N2 WILD-TYPE 111   2   0   1   2
D76V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  OR4N2 MUTATED   10  0   0   2   0   1   0  1  0
  OR4N2 WILD-TYPE 71  2   7  10   3   8   5  9  2
D76V5, multiclass
D76V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OR4N2 MUTATED         0        2        2        3         1         1
  OR4N2 WILD-TYPE      17        7        9       15         6         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  OR4N2 MUTATED           0         0          0          2          2        0
  OR4N2 WILD-TYPE         7         5          6         14         14        4
D76V7, multiclass

Clustering(77) Variable = CCDC11 MUTATION ANALYSIS
D77V1, survival
                  sevent
clus2               0  1
  CCDC11 MUTATED    8  5
  CCDC11 WILD-TYPE 64 66
  CCDC11 MUTATED CCDC11 WILD-TYPE 
              13              130 
  CCDC11 MUTATED CCDC11 WILD-TYPE 
               5               66 
$`CCDC11 MUTATED`
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I1 TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A29M 
       48.89        36.03       194.83        29.82        33.73        44.35 
TCGA-EE-A2A2 TCGA-EE-A2GC TCGA-EE-A2GI TCGA-EE-A2M6 TCGA-EE-A2MJ TCGA-EE-A3AG 
       24.43        43.23        22.55       129.24        96.23        23.47 
TCGA-GN-A26A 
       32.48 

$`CCDC11 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 
       49.74         2.70         6.38       117.17        20.38       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17Z 
       68.09        28.60        10.49       215.44        15.68         8.65 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H 
       14.70        26.86         4.93       109.64        78.87       168.26 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
       63.32        47.84        13.97        39.62        32.19         2.56 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 
       25.87        17.92        46.82        78.94        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK 
       47.54       314.53       135.91       182.01        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       55.00        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        19.56        67.13        21.67        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D 
       25.84         3.68        26.73        13.81       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26D 
       10.09        64.41        62.76        39.58 

  CCDC11 MUTATED CCDC11 WILD-TYPE 
           22.55             0.20 
  CCDC11 MUTATED CCDC11 WILD-TYPE 
          194.83           345.96 
  CCDC11 MUTATED CCDC11 WILD-TYPE 
           36.03            48.72 
[1] "22.6 - 194.8 (36.0)" "0.2 - 346.0 (48.7)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE"   "CCDC11 MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE"   "CCDC11 MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE"   "CCDC11 MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" "CCDC11 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CCDC11 WILD-TYPE"   "CCDC11 MUTATED" "CCDC11 WILD-TYPE" 
[1] "hr=" "1.2"
D77V2, continuous
D77V3, binary
                  cls
clus                0  1
  CCDC11 MUTATED    5  8
  CCDC11 WILD-TYPE 52 81
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CCDC11 MUTATED      5    8
  CCDC11 WILD-TYPE   52   81
        clus
vv       CCDC11 MUTATED CCDC11 WILD-TYPE
  FEMALE              5               52
  MALE                8               81
                  vv
clus                M0  M1 M1A M1B M1C
  CCDC11 MUTATED    12   0   0   0   0
  CCDC11 WILD-TYPE 112   2   1   1   2
D77V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  CCDC11 MUTATED    7  0   1   2   0   1   0  1  0
  CCDC11 WILD-TYPE 74  2   6  10   3   8   5  9  2
D77V5, multiclass
D77V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CCDC11 MUTATED         1        2        1        2         0         1
  CCDC11 WILD-TYPE      16        7       10       16         7         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  CCDC11 MUTATED           0         0          1          3          1
  CCDC11 WILD-TYPE         7         5          5         13         15
                  vv
clus               STAGE IV
  CCDC11 MUTATED          0
  CCDC11 WILD-TYPE        4
D77V7, multiclass

Clustering(78) Variable = LIN7A MUTATION ANALYSIS
D78V1, survival
                 sevent
clus2              0  1
  LIN7A MUTATED    3  5
  LIN7A WILD-TYPE 69 66
  LIN7A MUTATED LIN7A WILD-TYPE 
              8             135 
  LIN7A MUTATED LIN7A WILD-TYPE 
              5              66 
$`LIN7A MUTATED`
TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A29L TCGA-EE-A2GJ TCGA-EE-A2ML TCGA-EE-A3AB 
       33.73        26.86         2.56        89.33       203.01       122.73 
TCGA-EE-A3AF TCGA-FS-A1ZK 
       13.81        23.93 

$`LIN7A WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A185 
      215.44        15.68        29.82         8.65        14.70         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       39.62        32.19        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       78.94        24.43        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL 
      314.53       135.91       182.01        22.55        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
       96.23       144.76       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AC 
      103.56       136.44        41.59        53.26         4.24        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
        3.68        26.73        23.47       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        47.38       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  LIN7A MUTATED LIN7A WILD-TYPE 
           2.56            0.20 
  LIN7A MUTATED LIN7A WILD-TYPE 
         203.01          345.96 
  LIN7A MUTATED LIN7A WILD-TYPE 
         30.295          47.840 
[1] "2.6 - 203.0 (30.3)" "0.2 - 346.0 (47.8)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "LIN7A MUTATED" "LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "LIN7A MUTATED" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "LIN7A MUTATED" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE"   "LIN7A MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "LIN7A MUTATED" "LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "LIN7A MUTATED" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "LIN7A MUTATED" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE"   "LIN7A MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "LIN7A MUTATED" "LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
  "LIN7A MUTATED" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "LIN7A MUTATED" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE"   "LIN7A MUTATED" "LIN7A WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE"   "LIN7A MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"LIN7A WILD-TYPE" "LIN7A WILD-TYPE" "LIN7A WILD-TYPE" 
[1] "hr=" "1.4"
D78V2, continuous
D78V3, binary
                 cls
clus               0  1
  LIN7A MUTATED    2  6
  LIN7A WILD-TYPE 55 83
[1] "tbl2"
                 cls
clus              [,1] [,2]
  LIN7A MUTATED      2    6
  LIN7A WILD-TYPE   55   83
        clus
vv       LIN7A MUTATED LIN7A WILD-TYPE
  FEMALE             2              55
  MALE               6              83
                 vv
clus               M0  M1 M1A M1B M1C
  LIN7A MUTATED     6   0   0   0   0
  LIN7A WILD-TYPE 118   2   1   1   2
D78V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  LIN7A MUTATED    5  0   0   0   0   0   0  1  0
  LIN7A WILD-TYPE 76  2   7  12   3   9   5  9  2
D78V5, multiclass
D78V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  LIN7A MUTATED         1        1        0        3         0         0
  LIN7A WILD-TYPE      16        8       11       15         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  LIN7A MUTATED           0         0          0          0          1        0
  LIN7A WILD-TYPE         7         5          6         16         15        4
D78V7, multiclass

Clustering(79) Variable = RAPGEF5 MUTATION ANALYSIS
D79V1, survival
                   sevent
clus2                0  1
  RAPGEF5 MUTATED    4  2
  RAPGEF5 WILD-TYPE 68 69
  RAPGEF5 MUTATED RAPGEF5 WILD-TYPE 
                6               137 
  RAPGEF5 MUTATED RAPGEF5 WILD-TYPE 
                2                69 
$`RAPGEF5 MUTATED`
TCGA-EE-A182 TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2MS TCGA-EE-A3AD TCGA-EE-A3AG 
       14.70        90.94        13.87       136.44         3.68        23.47 

$`RAPGEF5 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 
      215.44        15.68        29.82         8.65        33.73        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GR 
       89.33        54.71        55.00        75.48       101.95        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D 
      122.73        25.84        26.73        13.81       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  RAPGEF5 MUTATED RAPGEF5 WILD-TYPE 
             3.68              0.20 
  RAPGEF5 MUTATED RAPGEF5 WILD-TYPE 
           136.44            345.96 
  RAPGEF5 MUTATED RAPGEF5 WILD-TYPE 
           19.085            47.840 
[1] "3.7 - 136.4 (19.1)" "0.2 - 346.0 (47.8)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
  "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
  "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
  "RAPGEF5 MUTATED" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE"   "RAPGEF5 MUTATED" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" "RAPGEF5 WILD-TYPE" 
[1] "hr=" "1"  
D79V2, continuous
D79V3, binary
                   cls
clus                 0  1
  RAPGEF5 MUTATED    1  5
  RAPGEF5 WILD-TYPE 56 84
[1] "tbl2"
                   cls
clus                [,1] [,2]
  RAPGEF5 MUTATED      1    5
  RAPGEF5 WILD-TYPE   56   84
        clus
vv       RAPGEF5 MUTATED RAPGEF5 WILD-TYPE
  FEMALE               1                56
  MALE                 5                84
                   vv
clus                 M0  M1 M1A M1B M1C
  RAPGEF5 MUTATED     4   0   0   0   0
  RAPGEF5 WILD-TYPE 120   2   1   1   2
D79V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  RAPGEF5 MUTATED    2  0   1   1   0   0   0  0  0
  RAPGEF5 WILD-TYPE 79  2   6  11   3   9   5 10  2
D79V5, multiclass
D79V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  RAPGEF5 MUTATED         0        0        0        1         1         0
  RAPGEF5 WILD-TYPE      17        9       11       17         6         8
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  RAPGEF5 MUTATED           0         0          0          1          1
  RAPGEF5 WILD-TYPE         7         5          6         15         15
                   vv
clus                STAGE IV
  RAPGEF5 MUTATED          0
  RAPGEF5 WILD-TYPE        4
D79V7, multiclass

Clustering(80) Variable = CD2 MUTATION ANALYSIS
D80V1, survival
               sevent
clus2            0  1
  CD2 MUTATED    8  6
  CD2 WILD-TYPE 64 65
  CD2 MUTATED CD2 WILD-TYPE 
           14           129 
  CD2 MUTATED CD2 WILD-TYPE 
            6            65 
$`CD2 MUTATED`
TCGA-D9-A148 TCGA-EE-A181 TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29M TCGA-EE-A29P 
      148.31        33.73        13.97        39.62        44.35        56.42 
TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2MJ TCGA-EE-A2MP TCGA-EE-A2MS 
       75.48       101.95        13.87        96.23       248.61       136.44 
TCGA-ER-A19J TCGA-GN-A266 
        6.41        10.09 

$`CD2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 
      121.22        58.03        71.24         9.30        21.47        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H 
      109.64        78.87       168.26        63.32        47.84        32.19 
TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
        2.56        18.58        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GR 
       22.55        89.33        54.71        55.00        90.94        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ 
      204.62       144.76       203.01       167.87        47.54        43.23 
TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      103.56        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
       26.37       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 
        0.20        76.41       120.46       117.93        84.72        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  CD2 MUTATED CD2 WILD-TYPE 
         6.41          0.20 
  CD2 MUTATED CD2 WILD-TYPE 
       248.61        345.96 
  CD2 MUTATED CD2 WILD-TYPE 
       50.385        47.540 
[1] "6.4 - 248.6 (50.4)" "0.2 - 346.0 (47.5)"
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
  "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"CD2 WILD-TYPE"   "CD2 MUTATED"   "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
  "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
  "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"CD2 WILD-TYPE"   "CD2 MUTATED"   "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
  "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
  "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"CD2 WILD-TYPE"   "CD2 MUTATED"   "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
  "CD2 MUTATED" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE"   "CD2 MUTATED" "CD2 WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
"CD2 WILD-TYPE" "CD2 WILD-TYPE" "CD2 WILD-TYPE" 
[1] "hr=" "1.3"
D80V2, continuous
D80V3, binary
               cls
clus             0  1
  CD2 MUTATED    6  8
  CD2 WILD-TYPE 51 81
[1] "tbl2"
               cls
clus            [,1] [,2]
  CD2 MUTATED      6    8
  CD2 WILD-TYPE   51   81
        clus
vv       CD2 MUTATED CD2 WILD-TYPE
  FEMALE           6            51
  MALE             8            81
               vv
clus             M0  M1 M1A M1B M1C
  CD2 MUTATED    11   1   0   1   0
  CD2 WILD-TYPE 113   1   1   0   2
D80V4, multiclass
               vv
clus            N0 N1 N1A N1B N2A N2B N2C N3 NX
  CD2 MUTATED    8  0   1   2   0   0   0  2  0
  CD2 WILD-TYPE 73  2   6  10   3   9   5  8  2
D80V5, multiclass
D80V6, continuous
               vv
clus            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CD2 MUTATED         1        0        1        4         0         0
  CD2 WILD-TYPE      16        9       10       14         7         8
               vv
clus            STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  CD2 MUTATED           2         0          0          2          1        1
  CD2 WILD-TYPE         5         5          6         14         15        3
D80V7, multiclass

Clustering(81) Variable = C2ORF40 MUTATION ANALYSIS
D81V1, survival
                   sevent
clus2                0  1
  C2ORF40 MUTATED    2  2
  C2ORF40 WILD-TYPE 70 69
  C2ORF40 MUTATED C2ORF40 WILD-TYPE 
                4               139 
  C2ORF40 MUTATED C2ORF40 WILD-TYPE 
                2                69 
$`C2ORF40 MUTATED`
TCGA-D9-A149 TCGA-EE-A2GR TCGA-EE-A2MM TCGA-GN-A266 
       49.74        14.30       167.87        10.09 

$`C2ORF40 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN 
       16.96       204.62        96.23       144.76       203.01        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      120.46       117.93        84.72        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  C2ORF40 MUTATED C2ORF40 WILD-TYPE 
            10.09              0.20 
  C2ORF40 MUTATED C2ORF40 WILD-TYPE 
           167.87            345.96 
  C2ORF40 MUTATED C2ORF40 WILD-TYPE 
            32.02             47.54 
[1] "10.1 - 167.9 (32.0)" "0.2 - 346.0 (47.5)" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE"   "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
  "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"C2ORF40 WILD-TYPE"   "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE"   "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE"   "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
  "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"C2ORF40 WILD-TYPE"   "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE"   "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE"   "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
  "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"C2ORF40 WILD-TYPE"   "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE"   "C2ORF40 MUTATED" "C2ORF40 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
[1] "hr=" "1.3"
D81V2, continuous
D81V3, binary
                   cls
clus                 0  1
  C2ORF40 MUTATED    2  2
  C2ORF40 WILD-TYPE 55 87
[1] "tbl2"
                   cls
clus                [,1] [,2]
  C2ORF40 MUTATED      2    2
  C2ORF40 WILD-TYPE   55   87
        clus
vv       C2ORF40 MUTATED C2ORF40 WILD-TYPE
  FEMALE               2                55
  MALE                 2                87
                   vv
clus                 M0  M1 M1A M1B M1C
  C2ORF40 MUTATED     3   0   0   0   0
  C2ORF40 WILD-TYPE 121   2   1   1   2
D81V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  C2ORF40 MUTATED    2  0   0   1   0   0   0  0  0
  C2ORF40 WILD-TYPE 79  2   7  11   3   9   5 10  2
D81V5, multiclass
D81V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  C2ORF40 MUTATED         1        0        0        1         0         0
  C2ORF40 WILD-TYPE      16        9       11       17         7         8
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  C2ORF40 MUTATED           0         0          0          0          0
  C2ORF40 WILD-TYPE         7         5          6         16         16
                   vv
clus                STAGE IV
  C2ORF40 MUTATED          0
  C2ORF40 WILD-TYPE        4
D81V7, multiclass
[1] "Remove cluster labels:" "C2ORF40 MUTATED"       
clus
  C2ORF40 MUTATED C2ORF40 WILD-TYPE 
                2               122 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29P        TCGA-EE-A29Q 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29V        TCGA-EE-A29X 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2A0        TCGA-EE-A2A1        TCGA-EE-A2A2        TCGA-EE-A2A5 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2A6        TCGA-EE-A2GB        TCGA-EE-A2GC        TCGA-EE-A2GD 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GE        TCGA-EE-A2GH        TCGA-EE-A2GI        TCGA-EE-A2GJ 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GK        TCGA-EE-A2GL        TCGA-EE-A2GM        TCGA-EE-A2GN 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GO        TCGA-EE-A2GP        TCGA-EE-A2GS        TCGA-EE-A2GT 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2GU        TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2M8        TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MG        TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MK        TCGA-EE-A2ML        TCGA-EE-A2MN        TCGA-EE-A2MP 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AE        TCGA-EE-A3AH        TCGA-ER-A19D 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-ER-A19J        TCGA-ER-A19O        TCGA-ER-A1A1        TCGA-ER-A3ET 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA        TCGA-FS-A1ZB 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF        TCGA-FS-A1ZG 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK        TCGA-FS-A1ZM 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS        TCGA-FS-A1ZT 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY        TCGA-FS-A1ZZ 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A267        TCGA-GN-A268 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 
       TCGA-GN-A26A        TCGA-GN-A26D 
"C2ORF40 WILD-TYPE" "C2ORF40 WILD-TYPE" 

Clustering(82) Variable = SGCZ MUTATION ANALYSIS
D82V1, survival
                sevent
clus2             0  1
  SGCZ MUTATED    6  9
  SGCZ WILD-TYPE 66 62
  SGCZ MUTATED SGCZ WILD-TYPE 
            15            128 
  SGCZ MUTATED SGCZ WILD-TYPE 
             9             62 
$`SGCZ MUTATED`
TCGA-D3-A3MV TCGA-DA-A1I1 TCGA-EE-A181 TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A2GB 
       21.47       194.83        33.73        18.58        14.47        47.54 
TCGA-EE-A2GJ TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A3AF TCGA-EE-A3AG 
       89.33        19.76        61.51        47.28        13.81        23.47 
TCGA-ER-A19L TCGA-FS-A1Z3 TCGA-GN-A266 
      131.08        20.91        10.09 

$`SGCZ WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       78.87       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S 
       32.19         2.56        44.35        56.42        37.35        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       39.25        58.75        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       22.55        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
      129.24        28.80       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       43.23       103.56       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AH TCGA-ER-A19D 
      122.73        25.84         3.68        26.73       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
       26.37         6.41        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
       48.59       228.59       202.62        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  SGCZ MUTATED SGCZ WILD-TYPE 
         10.09           0.20 
  SGCZ MUTATED SGCZ WILD-TYPE 
        194.83         345.96 
  SGCZ MUTATED SGCZ WILD-TYPE 
         23.47          48.87 
[1] "10.1 - 194.8 (23.5)" "0.2 - 346.0 (48.9)" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "SGCZ MUTATED"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED"   "SGCZ MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "SGCZ MUTATED"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED"   "SGCZ MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "SGCZ MUTATED"   "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED"   "SGCZ MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
  "SGCZ MUTATED" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE"   "SGCZ MUTATED" "SGCZ WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"SGCZ WILD-TYPE" "SGCZ WILD-TYPE" "SGCZ WILD-TYPE" 
[1] "hr=" "1.8"
D82V2, continuous
D82V3, binary
                cls
clus              0  1
  SGCZ MUTATED    6 10
  SGCZ WILD-TYPE 51 79
[1] "tbl2"
                cls
clus             [,1] [,2]
  SGCZ MUTATED      6   10
  SGCZ WILD-TYPE   51   79
        clus
vv       SGCZ MUTATED SGCZ WILD-TYPE
  FEMALE            6             51
  MALE             10             79
                vv
clus              M0  M1 M1A M1B M1C
  SGCZ MUTATED    10   0   0   0   0
  SGCZ WILD-TYPE 114   2   1   1   2
D82V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  SGCZ MUTATED    5  1   1   1   1   0   0  1  0
  SGCZ WILD-TYPE 76  1   6  11   2   9   5  9  2
D82V5, multiclass
D82V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  SGCZ MUTATED         1        1        0        2         0         0
  SGCZ WILD-TYPE      16        8       11       16         7         8
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  SGCZ MUTATED           0         1          1          1          2        0
  SGCZ WILD-TYPE         7         4          5         15         14        4
D82V7, multiclass

Clustering(83) Variable = SPANXN2 MUTATION ANALYSIS
D83V1, survival
                   sevent
clus2                0  1
  SPANXN2 MUTATED    3  8
  SPANXN2 WILD-TYPE 69 63
  SPANXN2 MUTATED SPANXN2 WILD-TYPE 
               11               132 
  SPANXN2 MUTATED SPANXN2 WILD-TYPE 
                8                63 
$`SPANXN2 MUTATED`
TCGA-DA-A1I4 TCGA-DA-A3F8 TCGA-EE-A181 TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A2GS 
       35.93        15.68        33.73        13.97        39.62        55.59 
TCGA-FS-A1Z3 TCGA-FS-A1ZP TCGA-FS-A1ZZ TCGA-GN-A266 TCGA-GN-A267 
       20.91        74.73        27.02        10.09        64.41 

$`SPANXN2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       194.83       176.55       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29L 
       78.87       168.26        63.32        47.84        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       39.25        58.75        47.54        43.23       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      182.01        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2GU 
       90.94       101.95        13.87        14.30        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      136.44        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
      216.92        48.59       228.59       202.62        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        47.38        23.93       101.26        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 
       53.16        26.56        49.48        27.06         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      120.46       117.93        84.72        62.76        32.48        39.58 

  SPANXN2 MUTATED SPANXN2 WILD-TYPE 
            10.09              0.20 
  SPANXN2 MUTATED SPANXN2 WILD-TYPE 
            74.73            345.96 
  SPANXN2 MUTATED SPANXN2 WILD-TYPE 
            33.73             48.72 
[1] "10.1 - 74.7 (33.7)" "0.2 - 346.0 (48.7)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
  "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED"   "SPANXN2 MUTATED" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
  "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED"   "SPANXN2 MUTATED" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
  "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
  "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "SPANXN2 MUTATED" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE"   "SPANXN2 MUTATED"   "SPANXN2 MUTATED" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" "SPANXN2 WILD-TYPE" 
[1] "hr=" "2.5"
D83V2, continuous
D83V3, binary
                   cls
clus                 0  1
  SPANXN2 MUTATED    4  9
  SPANXN2 WILD-TYPE 53 80
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SPANXN2 MUTATED      4    9
  SPANXN2 WILD-TYPE   53   80
        clus
vv       SPANXN2 MUTATED SPANXN2 WILD-TYPE
  FEMALE               4                53
  MALE                 9                80
                   vv
clus                 M0  M1 M1A M1B M1C
  SPANXN2 MUTATED    10   0   0   0   0
  SPANXN2 WILD-TYPE 114   2   1   1   2
D83V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  SPANXN2 MUTATED    4  0   1   3   0   2   0  0  0
  SPANXN2 WILD-TYPE 77  2   6   9   3   7   5 10  2
D83V5, multiclass
D83V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  SPANXN2 MUTATED         0        0        1        2         0         1
  SPANXN2 WILD-TYPE      17        9       10       16         7         7
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  SPANXN2 MUTATED           0         0          1          4          1
  SPANXN2 WILD-TYPE         7         5          5         12         15
                   vv
clus                STAGE IV
  SPANXN2 MUTATED          0
  SPANXN2 WILD-TYPE        4
D83V7, multiclass

Clustering(84) Variable = TLL1 MUTATION ANALYSIS
D84V1, survival
                sevent
clus2             0  1
  TLL1 MUTATED   15 14
  TLL1 WILD-TYPE 57 57
  TLL1 MUTATED TLL1 WILD-TYPE 
            29            114 
  TLL1 MUTATED TLL1 WILD-TYPE 
            14             57 
$`TLL1 MUTATED`
TCGA-D9-A1JX TCGA-DA-A1I5 TCGA-DA-A3F8 TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H 
        6.38       107.34        15.68        13.97        39.62        32.19 
TCGA-EE-A29R TCGA-EE-A29V TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GH 
       14.47        25.87        58.75        47.54        43.23       182.01 
TCGA-EE-A2GR TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2MG 
       14.30        67.13        21.67        61.51        47.28       103.17 
TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AE TCGA-ER-A19F 
       16.96        96.23       136.44        53.26        26.73        26.37 
TCGA-FS-A1ZA TCGA-FS-A1ZF TCGA-FS-A1ZZ TCGA-GN-A266 TCGA-GN-A268 
       27.68        15.45        27.02        10.09        62.76 

$`TLL1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      194.83       176.55        35.93        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17X 
       23.44        68.09        28.60        10.49       215.44        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
        8.65        33.73        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29L TCGA-EE-A29M 
       78.87       168.26        63.32        47.84         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X 
       18.58        56.42        37.35        55.89       345.96        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GD TCGA-EE-A2GE 
       46.82        78.94        24.43        39.25       314.53       135.91 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M6 TCGA-EE-A2M7 
      101.95        13.87        55.59        19.56       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2ME TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       19.76       103.27       204.62       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AA 
       47.54       248.61        43.23       103.56        41.59         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73        25.84         3.68        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       12.59         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZH 
        7.76        48.85        53.52        40.27         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 
       53.16        26.56        49.48        27.06         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
      120.46       117.93        84.72        64.41        32.48        39.58 

  TLL1 MUTATED TLL1 WILD-TYPE 
          6.38           0.20 
  TLL1 MUTATED TLL1 WILD-TYPE 
        182.01         345.96 
  TLL1 MUTATED TLL1 WILD-TYPE 
        32.190         49.185 
[1] "6.4 - 182.0 (32.2)" "0.2 - 346.0 (49.2)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"TLL1 WILD-TYPE"   "TLL1 MUTATED"   "TLL1 MUTATED"   "TLL1 MUTATED" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED"   "TLL1 MUTATED" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "TLL1 MUTATED"   "TLL1 MUTATED" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
  "TLL1 MUTATED" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"TLL1 WILD-TYPE"   "TLL1 MUTATED"   "TLL1 MUTATED"   "TLL1 MUTATED" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED"   "TLL1 MUTATED" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "TLL1 MUTATED"   "TLL1 MUTATED" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
  "TLL1 MUTATED" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"TLL1 WILD-TYPE"   "TLL1 MUTATED"   "TLL1 MUTATED"   "TLL1 MUTATED" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED"   "TLL1 MUTATED" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
  "TLL1 MUTATED"   "TLL1 MUTATED" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
  "TLL1 MUTATED" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"TLL1 WILD-TYPE" "TLL1 WILD-TYPE"   "TLL1 MUTATED" "TLL1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
  "TLL1 MUTATED" "TLL1 WILD-TYPE" "TLL1 WILD-TYPE" 
[1] "hr=" "1.4"
D84V2, continuous
D84V3, binary
                cls
clus              0  1
  TLL1 MUTATED   10 21
  TLL1 WILD-TYPE 47 68
[1] "tbl2"
                cls
clus             [,1] [,2]
  TLL1 MUTATED     10   21
  TLL1 WILD-TYPE   47   68
        clus
vv       TLL1 MUTATED TLL1 WILD-TYPE
  FEMALE           10             47
  MALE             21             68
                vv
clus             M0 M1 M1A M1B M1C
  TLL1 MUTATED   28  0   0   0   1
  TLL1 WILD-TYPE 96  2   1   1   1
D84V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  TLL1 MUTATED   20  0   1   5   0   1   1  0  1
  TLL1 WILD-TYPE 61  2   6   7   3   8   4 10  1
D84V5, multiclass
D84V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TLL1 MUTATED         4        5        0        5         0         3
  TLL1 WILD-TYPE      13        4       11       13         7         5
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  TLL1 MUTATED           1         0          1          4          3        1
  TLL1 WILD-TYPE         6         5          5         12         13        3
D84V7, multiclass

Clustering(85) Variable = C9ORF119 MUTATION ANALYSIS
D85V1, survival
                    sevent
clus2                 0  1
  C9ORF119 MUTATED    3  2
  C9ORF119 WILD-TYPE 69 69
  C9ORF119 MUTATED C9ORF119 WILD-TYPE 
                 5                138 
  C9ORF119 MUTATED C9ORF119 WILD-TYPE 
                 2                 69 
$`C9ORF119 MUTATED`
TCGA-EE-A29D TCGA-EE-A2A2 TCGA-EE-A2GH TCGA-EE-A2GN TCGA-FS-A1Z7 
       13.97        24.43       182.01        90.94         7.76 

$`C9ORF119 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       47.84        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       17.92        46.82        78.94        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
       43.23       314.53       135.91        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        75.48       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       43.23       103.56       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       20.91        28.08        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       27.06        27.02         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        62.76        32.48        39.58 

  C9ORF119 MUTATED C9ORF119 WILD-TYPE 
              7.76               0.20 
  C9ORF119 MUTATED C9ORF119 WILD-TYPE 
            182.01             345.96 
  C9ORF119 MUTATED C9ORF119 WILD-TYPE 
             24.43              47.69 
[1] "7.8 - 182.0 (24.4)" "0.2 - 346.0 (47.7)"
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
  "C9ORF119 MUTATED" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
  "C9ORF119 MUTATED" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE"   "C9ORF119 MUTATED" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
  "C9ORF119 MUTATED" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"C9ORF119 WILD-TYPE" "C9ORF119 WILD-TYPE" 
[1] "hr=" "1.1"
D85V2, continuous
D85V3, binary
                    cls
clus                  0  1
  C9ORF119 MUTATED    0  5
  C9ORF119 WILD-TYPE 57 84
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C9ORF119 MUTATED      0    5
  C9ORF119 WILD-TYPE   57   84
        clus
vv       C9ORF119 MUTATED C9ORF119 WILD-TYPE
  FEMALE                0                 57
  MALE                  5                 84
                    vv
clus                  M0  M1 M1A M1B M1C
  C9ORF119 MUTATED     5   0   0   0   0
  C9ORF119 WILD-TYPE 119   2   1   1   2
D85V4, multiclass
                    vv
clus                 N0 N1 N1A N1B N2A N2B N2C N3 NX
  C9ORF119 MUTATED    2  0   0   3   0   0   0  0  0
  C9ORF119 WILD-TYPE 79  2   7   9   3   9   5 10  2
D85V5, multiclass
D85V6, continuous
                    vv
clus                 STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  C9ORF119 MUTATED         1        0        0        0         1         0
  C9ORF119 WILD-TYPE      16        9       11       18         6         8
                    vv
clus                 STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  C9ORF119 MUTATED           0         0          0          1          2
  C9ORF119 WILD-TYPE         7         5          6         15         14
                    vv
clus                 STAGE IV
  C9ORF119 MUTATED          0
  C9ORF119 WILD-TYPE        4
D85V7, multiclass

Clustering(86) Variable = CCDC54 MUTATION ANALYSIS
D86V1, survival
                  sevent
clus2               0  1
  CCDC54 MUTATED    7  3
  CCDC54 WILD-TYPE 65 68
  CCDC54 MUTATED CCDC54 WILD-TYPE 
              10              133 
  CCDC54 MUTATED CCDC54 WILD-TYPE 
               3               68 
$`CCDC54 MUTATED`
TCGA-DA-A3F5 TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A2GC TCGA-EE-A2ML TCGA-EE-A2MR 
      215.44        18.58        14.47        43.23       203.01       103.56 
TCGA-EE-A3AA TCGA-EE-A3AE TCGA-ER-A19F TCGA-GN-A266 
        4.24        26.73        26.37        10.09 

$`CCDC54 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P 
       13.97        39.62        32.19         2.56        44.35        56.42 
TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       37.35        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD 
       78.94        24.43        39.25        58.75        47.54       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
       96.23       144.76       167.87        47.54       248.61        43.23 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
      136.44        41.59        53.26       122.73        25.84         3.68 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L 
       13.81        23.47       138.77        12.59         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      120.46       117.93        84.72        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  CCDC54 MUTATED CCDC54 WILD-TYPE 
            4.24             0.20 
  CCDC54 MUTATED CCDC54 WILD-TYPE 
          215.44           345.96 
  CCDC54 MUTATED CCDC54 WILD-TYPE 
           26.55            48.59 
[1] "4.2 - 215.4 (26.6)" "0.2 - 346.0 (48.6)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
  "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
  "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
  "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
  "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
  "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
  "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE"   "CCDC54 MUTATED" "CCDC54 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" "CCDC54 WILD-TYPE" 
[1] "hr=" "1.6"
D86V2, continuous
D86V3, binary
                  cls
clus                0  1
  CCDC54 MUTATED    2  8
  CCDC54 WILD-TYPE 55 81
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CCDC54 MUTATED      2    8
  CCDC54 WILD-TYPE   55   81
        clus
vv       CCDC54 MUTATED CCDC54 WILD-TYPE
  FEMALE              2               55
  MALE                8               81
                  vv
clus                M0  M1 M1A M1B M1C
  CCDC54 MUTATED     8   0   0   0   0
  CCDC54 WILD-TYPE 116   2   1   1   2
D86V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  CCDC54 MUTATED    6  0   0   1   0   0   0  1  0
  CCDC54 WILD-TYPE 75  2   7  11   3   9   5  9  2
D86V5, multiclass
D86V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CCDC54 MUTATED         1        1        0        1         0         1
  CCDC54 WILD-TYPE      16        8       11       17         7         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  CCDC54 MUTATED           0         0          0          0          2
  CCDC54 WILD-TYPE         7         5          6         16         14
                  vv
clus               STAGE IV
  CCDC54 MUTATED          0
  CCDC54 WILD-TYPE        4
D86V7, multiclass

Clustering(87) Variable = DEFB118 MUTATION ANALYSIS
D87V1, survival
                   sevent
clus2                0  1
  DEFB118 MUTATED    4  2
  DEFB118 WILD-TYPE 68 69
  DEFB118 MUTATED DEFB118 WILD-TYPE 
                6               137 
  DEFB118 MUTATED DEFB118 WILD-TYPE 
                2                69 
$`DEFB118 MUTATED`
TCGA-DA-A1I1 TCGA-EE-A29R TCGA-EE-A2A6 TCGA-EE-A2MI TCGA-EE-A2MP TCGA-ER-A19F 
      194.83        14.47        58.75       204.62       248.61        26.37 

$`DEFB118 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       56.42        37.35        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GC 
       46.82        78.94        24.43        39.25        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       55.00        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ 
       96.23       144.76       203.01       167.87        47.54        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       12.59         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  DEFB118 MUTATED DEFB118 WILD-TYPE 
            14.47              0.20 
  DEFB118 MUTATED DEFB118 WILD-TYPE 
           248.61            345.96 
  DEFB118 MUTATED DEFB118 WILD-TYPE 
           126.79             47.54 
[1] "14.5 - 248.6 (126.8)" "0.2 - 346.0 (47.5)"  
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE"   "DEFB118 MUTATED" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE"   "DEFB118 MUTATED" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE"   "DEFB118 MUTATED" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE"   "DEFB118 MUTATED" "DEFB118 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" "DEFB118 WILD-TYPE" 
[1] "hr=" "2.8"
D87V2, continuous
D87V3, binary
                   cls
clus                 0  1
  DEFB118 MUTATED    2  4
  DEFB118 WILD-TYPE 55 85
[1] "tbl2"
                   cls
clus                [,1] [,2]
  DEFB118 MUTATED      2    4
  DEFB118 WILD-TYPE   55   85
        clus
vv       DEFB118 MUTATED DEFB118 WILD-TYPE
  FEMALE               2                55
  MALE                 4                85
                   vv
clus                 M0  M1 M1A M1B M1C
  DEFB118 MUTATED     6   0   0   0   0
  DEFB118 WILD-TYPE 118   2   1   1   2
D87V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  DEFB118 MUTATED    4  0   0   1   0   0   0  1  0
  DEFB118 WILD-TYPE 77  2   7  11   3   9   5  9  2
D87V5, multiclass
D87V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  DEFB118 MUTATED         1        1        0        0         0         1
  DEFB118 WILD-TYPE      16        8       11       18         7         7
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  DEFB118 MUTATED           0         0          0          0          2
  DEFB118 WILD-TYPE         7         5          6         16         14
                   vv
clus                STAGE IV
  DEFB118 MUTATED          0
  DEFB118 WILD-TYPE        4
D87V7, multiclass

Clustering(88) Variable = HTR3B MUTATION ANALYSIS
D88V1, survival
                 sevent
clus2              0  1
  HTR3B MUTATED   10  0
  HTR3B WILD-TYPE 62 71
  HTR3B MUTATED HTR3B WILD-TYPE 
             10             133 
  HTR3B MUTATED HTR3B WILD-TYPE 
              0              71 
$`HTR3B MUTATED`
TCGA-D3-A1Q7 TCGA-DA-A3F8 TCGA-EE-A29C TCGA-EE-A2GC TCGA-EE-A2GI TCGA-EE-A2GT 
      121.22        15.68        47.84        43.23        22.55        19.56 
TCGA-EE-A2M6 TCGA-EE-A2MR TCGA-EE-A3AA TCGA-ER-A3ET 
      129.24       103.56         4.24        80.32 

$`HTR3B WILD-TYPE`
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
       58.03        71.24         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29E 
      109.64        78.87       168.26        63.32        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD 
       78.94        24.43        39.25        58.75        47.54       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      135.91       182.01        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU 
       90.94       101.95        13.87        14.30        55.59        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       21.67        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT 
      167.87        47.54       248.61        43.23       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
       53.26       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       44.05        79.99       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  HTR3B MUTATED HTR3B WILD-TYPE 
           4.24            0.20 
  HTR3B MUTATED HTR3B WILD-TYPE 
         129.24          345.96 
  HTR3B MUTATED HTR3B WILD-TYPE 
         45.535          47.540 
[1] "4.2 - 129.2 (45.5)" "0.2 - 346.0 (47.5)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE"   "HTR3B MUTATED" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE"   "HTR3B MUTATED" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"HTR3B WILD-TYPE"   "HTR3B MUTATED" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE"   "HTR3B MUTATED" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"HTR3B WILD-TYPE" "HTR3B WILD-TYPE" "HTR3B WILD-TYPE" 
[1] "hr="     "7.4e+07"
D88V2, continuous
D88V3, binary
                 cls
clus               0  1
  HTR3B MUTATED    2  8
  HTR3B WILD-TYPE 55 81
[1] "tbl2"
                 cls
clus              [,1] [,2]
  HTR3B MUTATED      2    8
  HTR3B WILD-TYPE   55   81
        clus
vv       HTR3B MUTATED HTR3B WILD-TYPE
  FEMALE             2              55
  MALE               8              81
                 vv
clus               M0  M1 M1A M1B M1C
  HTR3B MUTATED     9   0   0   0   0
  HTR3B WILD-TYPE 115   2   1   1   2
D88V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  HTR3B MUTATED    7  0   1   0   0   1   0  0  0
  HTR3B WILD-TYPE 74  2   6  12   3   8   5 10  2
D88V5, multiclass
D88V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  HTR3B MUTATED         2        1        2        0         1         1
  HTR3B WILD-TYPE      15        8        9       18         6         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  HTR3B MUTATED           0         0          1          1          0        0
  HTR3B WILD-TYPE         7         5          5         15         16        4
D88V7, multiclass

Clustering(89) Variable = MARCH11 MUTATION ANALYSIS
D89V1, survival
                   sevent
clus2                0  1
  MARCH11 MUTATED    4  3
  MARCH11 WILD-TYPE 68 68
  MARCH11 MUTATED MARCH11 WILD-TYPE 
                7               136 
  MARCH11 MUTATED MARCH11 WILD-TYPE 
                3                68 
$`MARCH11 MUTATED`
TCGA-DA-A1I5 TCGA-EE-A2GM TCGA-EE-A2M6 TCGA-EE-A2MJ TCGA-FS-A1YW TCGA-FS-A1ZK 
      107.34        75.48       129.24        96.23       216.92        23.93 
TCGA-FS-A1ZT 
       53.16 

$`MARCH11 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       194.83       176.55        35.93        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       89.33        54.71        55.00        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13        21.67        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
      204.62       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       43.23       103.56       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       79.99        80.32        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        47.38       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
       11.41       148.77        26.56        49.48        27.06        27.02 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
        0.20        76.41       120.46       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  MARCH11 MUTATED MARCH11 WILD-TYPE 
            23.93              0.20 
  MARCH11 MUTATED MARCH11 WILD-TYPE 
           216.92            345.96 
  MARCH11 MUTATED MARCH11 WILD-TYPE 
            96.23             47.33 
[1] "23.9 - 216.9 (96.2)" "0.2 - 346.0 (47.3)" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"MARCH11 WILD-TYPE"   "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE"   "MARCH11 MUTATED" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE"   "MARCH11 MUTATED" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"MARCH11 WILD-TYPE"   "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE"   "MARCH11 MUTATED" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE"   "MARCH11 MUTATED" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"MARCH11 WILD-TYPE"   "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE"   "MARCH11 MUTATED" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE"   "MARCH11 MUTATED" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
  "MARCH11 MUTATED" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" "MARCH11 WILD-TYPE" 
[1] "hr=" "1.8"
D89V2, continuous
D89V3, binary
                   cls
clus                 0  1
  MARCH11 MUTATED    2  5
  MARCH11 WILD-TYPE 55 84
[1] "tbl2"
                   cls
clus                [,1] [,2]
  MARCH11 MUTATED      2    5
  MARCH11 WILD-TYPE   55   84
        clus
vv       MARCH11 MUTATED MARCH11 WILD-TYPE
  FEMALE               2                55
  MALE                 5                84
                   vv
clus                 M0  M1 M1A M1B M1C
  MARCH11 MUTATED     6   0   0   0   1
  MARCH11 WILD-TYPE 118   2   1   1   1
D89V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  MARCH11 MUTATED    6  0   0   1   0   0   0  0  0
  MARCH11 WILD-TYPE 75  2   7  11   3   9   5 10  2
D89V5, multiclass
D89V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  MARCH11 MUTATED         1        0        1        2         0         0
  MARCH11 WILD-TYPE      16        9       10       16         7         8
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  MARCH11 MUTATED           1         1          0          0          0
  MARCH11 WILD-TYPE         6         4          6         16         16
                   vv
clus                STAGE IV
  MARCH11 MUTATED          1
  MARCH11 WILD-TYPE        3
D89V7, multiclass

Clustering(90) Variable = MKX MUTATION ANALYSIS
D90V1, survival
               sevent
clus2            0  1
  MKX MUTATED    8  2
  MKX WILD-TYPE 64 69
  MKX MUTATED MKX WILD-TYPE 
           10           133 
  MKX MUTATED MKX WILD-TYPE 
            2            69 
$`MKX MUTATED`
TCGA-EE-A29E TCGA-EE-A29M TCGA-EE-A29Q TCGA-EE-A2GC TCGA-EE-A2GI TCGA-EE-A3AA 
       39.62        44.35        37.35        43.23        22.55         4.24 
TCGA-EE-A3AG TCGA-ER-A19F TCGA-GN-A265 TCGA-GN-A268 
       23.47        26.37        84.72        62.76 

$`MKX WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P 
       47.84        13.97        32.19         2.56        18.58        56.42 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD 
       78.94        24.43        39.25        58.75        47.54       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      135.91       182.01        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       90.94       101.95        13.87        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       67.13        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC 
      103.56       136.44        41.59        53.26       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J 
        3.68        26.73        13.81       138.77        12.59         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
       76.41       120.46       117.93        10.09        64.41        32.48 
TCGA-GN-A26D 
       39.58 

  MKX MUTATED MKX WILD-TYPE 
         4.24          0.20 
  MKX MUTATED MKX WILD-TYPE 
        84.72        345.96 
  MKX MUTATED MKX WILD-TYPE 
       38.485        48.850 
[1] "4.2 - 84.7 (38.5)"  "0.2 - 346.0 (48.9)"
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
  "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
  "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
  "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
  "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
  "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"MKX WILD-TYPE" "MKX WILD-TYPE"   "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
  "MKX MUTATED" "MKX WILD-TYPE" "MKX WILD-TYPE" 
[1] "hr=" "1.7"
D90V2, continuous
D90V3, binary
               cls
clus             0  1
  MKX MUTATED    3  7
  MKX WILD-TYPE 54 82
[1] "tbl2"
               cls
clus            [,1] [,2]
  MKX MUTATED      3    7
  MKX WILD-TYPE   54   82
        clus
vv       MKX MUTATED MKX WILD-TYPE
  FEMALE           3            54
  MALE             7            82
               vv
clus             M0  M1 M1A M1B M1C
  MKX MUTATED     7   0   0   0   0
  MKX WILD-TYPE 117   2   1   1   2
D90V4, multiclass
               vv
clus            N0 N1 N1A N1B N2A N2B N2C N3 NX
  MKX MUTATED    6  0   0   1   0   0   0  0  0
  MKX WILD-TYPE 75  2   7  11   3   9   5 10  2
D90V5, multiclass
D90V6, continuous
               vv
clus            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  MKX MUTATED         0        1        1        0         0         3
  MKX WILD-TYPE      17        8       10       18         7         5
               vv
clus            STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  MKX MUTATED           0         0          0          1          0        0
  MKX WILD-TYPE         7         5          6         15         16        4
D90V7, multiclass

Clustering(91) Variable = OR5H2 MUTATION ANALYSIS
D91V1, survival
                 sevent
clus2              0  1
  OR5H2 MUTATED    7  4
  OR5H2 WILD-TYPE 65 67
  OR5H2 MUTATED OR5H2 WILD-TYPE 
             11             132 
  OR5H2 MUTATED OR5H2 WILD-TYPE 
              4              67 
$`OR5H2 MUTATED`
TCGA-DA-A1HV TCGA-DA-A1I7 TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A29E TCGA-EE-A29R 
       48.89        61.18        33.73        14.70        39.62        14.47 
TCGA-EE-A2GD TCGA-EE-A2MD TCGA-EE-A2MR TCGA-EE-A2MS TCGA-FS-A1ZK 
      314.53        47.28       103.56       136.44        23.93 

$`OR5H2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA 
      194.83       176.55        35.93       107.34        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
       29.82         8.65        26.86         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L 
      168.26        63.32        47.84        13.97        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T 
       44.35        18.58        56.42        37.35        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       58.75        47.54        43.23       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
      129.24        28.80        19.76        61.51       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       47.54       248.61        43.23        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM 
       40.27        15.45         9.70        32.71        47.38       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       27.06        27.02         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        62.76        32.48        39.58 

  OR5H2 MUTATED OR5H2 WILD-TYPE 
          14.47            0.20 
  OR5H2 MUTATED OR5H2 WILD-TYPE 
         314.53          345.96 
  OR5H2 MUTATED OR5H2 WILD-TYPE 
          47.28           47.69 
[1] "14.5 - 314.5 (47.3)" "0.2 - 346.0 (47.7)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OR5H2 MUTATED"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE"   "OR5H2 MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OR5H2 MUTATED"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE"   "OR5H2 MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OR5H2 MUTATED"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR5H2 WILD-TYPE"   "OR5H2 MUTATED"   "OR5H2 MUTATED" "OR5H2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE"   "OR5H2 MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" "OR5H2 WILD-TYPE" 
[1] "hr=" "1.5"
D91V2, continuous
D91V3, binary
                 cls
clus               0  1
  OR5H2 MUTATED    5  6
  OR5H2 WILD-TYPE 52 83
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR5H2 MUTATED      5    6
  OR5H2 WILD-TYPE   52   83
        clus
vv       OR5H2 MUTATED OR5H2 WILD-TYPE
  FEMALE             5              52
  MALE               6              83
                 vv
clus               M0  M1 M1A M1B M1C
  OR5H2 MUTATED    11   0   0   0   0
  OR5H2 WILD-TYPE 113   2   1   1   2
D91V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  OR5H2 MUTATED    6  0   0   3   0   2   0  0  0
  OR5H2 WILD-TYPE 75  2   7   9   3   7   5 10  2
D91V5, multiclass
D91V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OR5H2 MUTATED         1        0        0        4         0         1
  OR5H2 WILD-TYPE      16        9       11       14         7         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  OR5H2 MUTATED           0         0          0          3          2        0
  OR5H2 WILD-TYPE         7         5          6         13         14        4
D91V7, multiclass

Clustering(92) Variable = SIGLEC14 MUTATION ANALYSIS
D92V1, survival
                    sevent
clus2                 0  1
  SIGLEC14 MUTATED    3  3
  SIGLEC14 WILD-TYPE 69 68
  SIGLEC14 MUTATED SIGLEC14 WILD-TYPE 
                 6                137 
  SIGLEC14 MUTATED SIGLEC14 WILD-TYPE 
                 3                 68 
$`SIGLEC14 MUTATED`
TCGA-DA-A1I1 TCGA-EE-A29V TCGA-EE-A2GC TCGA-EE-A2MR TCGA-FS-A1ZY TCGA-GN-A266 
      194.83        25.87        43.23       103.56        27.06        10.09 

$`SIGLEC14 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X 
       56.42        37.35        14.47        55.89       345.96        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       55.00        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       49.48        27.02         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        64.41        62.76        32.48        39.58 

  SIGLEC14 MUTATED SIGLEC14 WILD-TYPE 
             10.09               0.20 
  SIGLEC14 MUTATED SIGLEC14 WILD-TYPE 
            194.83             345.96 
  SIGLEC14 MUTATED SIGLEC14 WILD-TYPE 
            35.145             47.840 
[1] "10.1 - 194.8 (35.1)" "0.2 - 346.0 (47.8)" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
  "SIGLEC14 MUTATED" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
  "SIGLEC14 MUTATED" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
  "SIGLEC14 MUTATED" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
  "SIGLEC14 MUTATED" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-D3-A1Q7         TCGA-D3-A3C6         TCGA-D3-A3CC 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-D3-A3MO         TCGA-D3-A3MV         TCGA-D9-A148 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-D9-A149         TCGA-D9-A1JW         TCGA-D9-A1JX 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1HV         TCGA-DA-A1HW         TCGA-DA-A1HY 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1I0         TCGA-DA-A1I1         TCGA-DA-A1I2 
"SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1I4         TCGA-DA-A1I5         TCGA-DA-A1I7 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1I8         TCGA-DA-A1IA         TCGA-DA-A1IB 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A1IC         TCGA-DA-A3F2         TCGA-DA-A3F3 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-DA-A3F5         TCGA-DA-A3F8         TCGA-EE-A17X 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A17Z         TCGA-EE-A181         TCGA-EE-A182 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A183         TCGA-EE-A185         TCGA-EE-A20B 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A20F         TCGA-EE-A20H         TCGA-EE-A29A 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29C         TCGA-EE-A29D         TCGA-EE-A29E 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29H         TCGA-EE-A29L         TCGA-EE-A29M 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29N         TCGA-EE-A29P         TCGA-EE-A29Q 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29R         TCGA-EE-A29S         TCGA-EE-A29T 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A29V         TCGA-EE-A29X         TCGA-EE-A2A0 
  "SIGLEC14 MUTATED" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2A1         TCGA-EE-A2A2         TCGA-EE-A2A5 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2A6         TCGA-EE-A2GB         TCGA-EE-A2GC 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" 
        TCGA-EE-A2GD         TCGA-EE-A2GE         TCGA-EE-A2GH 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GI         TCGA-EE-A2GJ         TCGA-EE-A2GK 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GL         TCGA-EE-A2GM         TCGA-EE-A2GN 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GO         TCGA-EE-A2GP         TCGA-EE-A2GR 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2GS         TCGA-EE-A2GT         TCGA-EE-A2GU 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2M5         TCGA-EE-A2M6         TCGA-EE-A2M7 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2M8         TCGA-EE-A2MC         TCGA-EE-A2MD 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2ME         TCGA-EE-A2MG         TCGA-EE-A2MH 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2MI         TCGA-EE-A2MJ         TCGA-EE-A2MK 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2ML         TCGA-EE-A2MM         TCGA-EE-A2MN 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A2MP         TCGA-EE-A2MQ         TCGA-EE-A2MR 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" 
        TCGA-EE-A2MS         TCGA-EE-A2MT         TCGA-EE-A2MU 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A3AA         TCGA-EE-A3AB         TCGA-EE-A3AC 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A3AD         TCGA-EE-A3AE         TCGA-EE-A3AF 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-EE-A3AG         TCGA-EE-A3AH         TCGA-ER-A19D 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-ER-A19F         TCGA-ER-A19J         TCGA-ER-A19L 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-ER-A19N         TCGA-ER-A1A1         TCGA-ER-A3ET 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1YW         TCGA-FS-A1YX         TCGA-FS-A1YY 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1Z0         TCGA-FS-A1Z3         TCGA-FS-A1Z4 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1Z7         TCGA-FS-A1ZA         TCGA-FS-A1ZB 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZD         TCGA-FS-A1ZE         TCGA-FS-A1ZF 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZG         TCGA-FS-A1ZH         TCGA-FS-A1ZJ 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZK         TCGA-FS-A1ZM         TCGA-FS-A1ZP 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZR         TCGA-FS-A1ZS         TCGA-FS-A1ZT 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-FS-A1ZU         TCGA-FS-A1ZW         TCGA-FS-A1ZY 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE"   "SIGLEC14 MUTATED" 
        TCGA-FS-A1ZZ         TCGA-FW-A3I3         TCGA-GN-A261 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-GN-A262         TCGA-GN-A264         TCGA-GN-A265 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-GN-A266         TCGA-GN-A267         TCGA-GN-A268 
  "SIGLEC14 MUTATED" "SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
        TCGA-GN-A26A         TCGA-GN-A26D 
"SIGLEC14 WILD-TYPE" "SIGLEC14 WILD-TYPE" 
[1] "hr=" "1.1"
D92V2, continuous
D92V3, binary
                    cls
clus                  0  1
  SIGLEC14 MUTATED    0  6
  SIGLEC14 WILD-TYPE 57 83
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  SIGLEC14 MUTATED      0    6
  SIGLEC14 WILD-TYPE   57   83
        clus
vv       SIGLEC14 MUTATED SIGLEC14 WILD-TYPE
  FEMALE                0                 57
  MALE                  6                 83
                    vv
clus                  M0  M1 M1A M1B M1C
  SIGLEC14 MUTATED     5   0   0   0   0
  SIGLEC14 WILD-TYPE 119   2   1   1   2
D92V4, multiclass
                    vv
clus                 N0 N1 N1A N1B N2A N2B N2C N3 NX
  SIGLEC14 MUTATED    3  0   0   1   0   0   0  1  0
  SIGLEC14 WILD-TYPE 78  2   7  11   3   9   5  9  2
D92V5, multiclass
D92V6, continuous
                    vv
clus                 STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  SIGLEC14 MUTATED         1        0        0        0         0         2
  SIGLEC14 WILD-TYPE      16        9       11       18         7         6
                    vv
clus                 STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  SIGLEC14 MUTATED           0         0          0          0          2
  SIGLEC14 WILD-TYPE         7         5          6         16         14
                    vv
clus                 STAGE IV
  SIGLEC14 MUTATED          0
  SIGLEC14 WILD-TYPE        4
D92V7, multiclass

Clustering(93) Variable = TUBB8 MUTATION ANALYSIS
D93V1, survival
                 sevent
clus2              0  1
  TUBB8 MUTATED    3  4
  TUBB8 WILD-TYPE 69 67
  TUBB8 MUTATED TUBB8 WILD-TYPE 
              7             136 
  TUBB8 MUTATED TUBB8 WILD-TYPE 
              4              67 
$`TUBB8 MUTATED`
TCGA-DA-A1IA TCGA-EE-A2GL TCGA-EE-A2GR TCGA-EE-A3AD TCGA-ER-A19L TCGA-FS-A1YW 
       65.92        55.00        14.30         3.68       131.08       216.92 
TCGA-FS-A1ZP 
       74.73 

$`TUBB8 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       53.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       89.33        54.71        75.48        90.94       101.95        13.87 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24       122.73        25.84        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19N TCGA-ER-A1A1 
      138.77        12.59        26.37         6.41        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
       80.32        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZR 
        9.70        32.71        47.38        23.93       101.26        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
        0.20        76.41       120.46       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  TUBB8 MUTATED TUBB8 WILD-TYPE 
           3.68            0.20 
  TUBB8 MUTATED TUBB8 WILD-TYPE 
         216.92          345.96 
  TUBB8 MUTATED TUBB8 WILD-TYPE 
          65.92           47.46 
[1] "3.7 - 216.9 (65.9)" "0.2 - 346.0 (47.5)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE"   "TUBB8 MUTATED" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE"   "TUBB8 MUTATED" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"TUBB8 WILD-TYPE"   "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE"   "TUBB8 MUTATED" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE"   "TUBB8 MUTATED" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"TUBB8 WILD-TYPE"   "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE"   "TUBB8 MUTATED" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE"   "TUBB8 MUTATED" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
  "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"TUBB8 WILD-TYPE"   "TUBB8 MUTATED" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" "TUBB8 WILD-TYPE" 
[1] "hr=" "1.1"
D93V2, continuous
D93V3, binary
                 cls
clus               0  1
  TUBB8 MUTATED    2  5
  TUBB8 WILD-TYPE 55 84
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TUBB8 MUTATED      2    5
  TUBB8 WILD-TYPE   55   84
        clus
vv       TUBB8 MUTATED TUBB8 WILD-TYPE
  FEMALE             2              55
  MALE               5              84
                 vv
clus               M0  M1 M1A M1B M1C
  TUBB8 MUTATED     5   0   0   0   0
  TUBB8 WILD-TYPE 119   2   1   1   2
D93V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  TUBB8 MUTATED    4  0   0   1   0   0   0  0  0
  TUBB8 WILD-TYPE 77  2   7  11   3   9   5 10  2
D93V5, multiclass
D93V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TUBB8 MUTATED         0        0        1        2         1         0
  TUBB8 WILD-TYPE      17        9       10       16         6         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  TUBB8 MUTATED           0         0          0          1          0        0
  TUBB8 WILD-TYPE         7         5          6         15         16        4
D93V7, multiclass

Clustering(94) Variable = ZIM3 MUTATION ANALYSIS
D94V1, survival
                sevent
clus2             0  1
  ZIM3 MUTATED    9  3
  ZIM3 WILD-TYPE 63 68
  ZIM3 MUTATED ZIM3 WILD-TYPE 
            12            131 
  ZIM3 MUTATED ZIM3 WILD-TYPE 
             3             68 
$`ZIM3 MUTATED`
TCGA-DA-A1IC TCGA-EE-A29M TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GJ TCGA-EE-A2GO 
       68.09        44.35       314.53       135.91        89.33       101.95 
TCGA-EE-A2M6 TCGA-EE-A2MI TCGA-EE-A2MU TCGA-EE-A3AG TCGA-ER-A19N TCGA-FS-A1ZK 
      129.24       204.62        53.26        23.47        44.05        23.93 

$`ZIM3 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       53.92        65.92        23.44        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P 
       13.97        39.62        32.19         2.56        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
       43.23       182.01        22.55        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
       90.94        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       21.67        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.17        16.96        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A1A1 
      138.77        12.59        26.37         6.41       131.08        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        47.38       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  ZIM3 MUTATED ZIM3 WILD-TYPE 
         23.47           0.20 
  ZIM3 MUTATED ZIM3 WILD-TYPE 
        314.53         345.96 
  ZIM3 MUTATED ZIM3 WILD-TYPE 
         78.71          47.38 
[1] "23.5 - 314.5 (78.7)" "0.2 - 346.0 (47.4)" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE"   "ZIM3 MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE"   "ZIM3 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE"   "ZIM3 MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE"   "ZIM3 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
  "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE"   "ZIM3 MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"ZIM3 WILD-TYPE"   "ZIM3 MUTATED" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE"   "ZIM3 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" "ZIM3 WILD-TYPE" 
[1] "hr=" "3.1"
D94V2, continuous
D94V3, binary
                cls
clus              0  1
  ZIM3 MUTATED    3  9
  ZIM3 WILD-TYPE 54 80
[1] "tbl2"
                cls
clus             [,1] [,2]
  ZIM3 MUTATED      3    9
  ZIM3 WILD-TYPE   54   80
        clus
vv       ZIM3 MUTATED ZIM3 WILD-TYPE
  FEMALE            3             54
  MALE              9             80
                vv
clus              M0  M1 M1A M1B M1C
  ZIM3 MUTATED    10   0   0   0   0
  ZIM3 WILD-TYPE 114   2   1   1   2
D94V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  ZIM3 MUTATED    9  0   0   0   0   0   1  0  0
  ZIM3 WILD-TYPE 72  2   7  12   3   9   4 10  2
D94V5, multiclass
D94V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  ZIM3 MUTATED         2        2        1        2         0         2
  ZIM3 WILD-TYPE      15        7       10       16         7         6
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  ZIM3 MUTATED           0         0          0          1          0        0
  ZIM3 WILD-TYPE         7         5          6         15         16        4
D94V7, multiclass

Clustering(95) Variable = PRC1 MUTATION ANALYSIS
D95V1, survival
                sevent
clus2             0  1
  PRC1 MUTATED    4  3
  PRC1 WILD-TYPE 68 68
  PRC1 MUTATED PRC1 WILD-TYPE 
             7            136 
  PRC1 MUTATED PRC1 WILD-TYPE 
             3             68 
$`PRC1 MUTATED`
TCGA-DA-A1HV TCGA-EE-A183 TCGA-EE-A2A5 TCGA-EE-A2GH TCGA-EE-A2GM TCGA-EE-A3AD 
       48.89        26.86        39.25       182.01        75.48         3.68 
TCGA-FS-A1ZK 
       23.93 

$`PRC1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 
       15.68        29.82         8.65        33.73        14.70         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       46.82        78.94        24.43        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      314.53       135.91        22.55        89.33        54.71        55.00 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       90.94       101.95        13.87        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       67.13        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
       25.84        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
        9.70        32.71        47.38       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
        0.20        76.41       120.46       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  PRC1 MUTATED PRC1 WILD-TYPE 
          3.68           0.20 
  PRC1 MUTATED PRC1 WILD-TYPE 
        182.01         345.96 
  PRC1 MUTATED PRC1 WILD-TYPE 
         39.25          47.69 
[1] "3.7 - 182.0 (39.2)" "0.2 - 346.0 (47.7)"
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRC1 WILD-TYPE"   "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE"   "PRC1 MUTATED" "PRC1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRC1 WILD-TYPE"   "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE"   "PRC1 MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
  "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE"   "PRC1 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRC1 WILD-TYPE"   "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE"   "PRC1 MUTATED" "PRC1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRC1 WILD-TYPE"   "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE"   "PRC1 MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
  "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE"   "PRC1 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"PRC1 WILD-TYPE"   "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE"   "PRC1 MUTATED" "PRC1 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"PRC1 WILD-TYPE"   "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE"   "PRC1 MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
  "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
  "PRC1 MUTATED" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE"   "PRC1 MUTATED" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"PRC1 WILD-TYPE" "PRC1 WILD-TYPE" "PRC1 WILD-TYPE" 
[1] "hr=" "1"  
D95V2, continuous
D95V3, binary
                cls
clus              0  1
  PRC1 MUTATED    2  5
  PRC1 WILD-TYPE 55 84
[1] "tbl2"
                cls
clus             [,1] [,2]
  PRC1 MUTATED      2    5
  PRC1 WILD-TYPE   55   84
        clus
vv       PRC1 MUTATED PRC1 WILD-TYPE
  FEMALE            2             55
  MALE              5             84
                vv
clus              M0  M1 M1A M1B M1C
  PRC1 MUTATED     6   0   0   0   0
  PRC1 WILD-TYPE 118   2   1   1   2
D95V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  PRC1 MUTATED    5  0   0   0   0   1   0  0  0
  PRC1 WILD-TYPE 76  2   7  12   3   8   5 10  2
D95V5, multiclass
D95V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  PRC1 MUTATED         2        0        1        1         0         0
  PRC1 WILD-TYPE      15        9       10       17         7         8
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  PRC1 MUTATED           1         0          0          1          0        0
  PRC1 WILD-TYPE         6         5          6         15         16        4
D95V7, multiclass

Clustering(96) Variable = MUM1L1 MUTATION ANALYSIS
D96V1, survival
                  sevent
clus2               0  1
  MUM1L1 MUTATED    9  6
  MUM1L1 WILD-TYPE 63 65
  MUM1L1 MUTATED MUM1L1 WILD-TYPE 
              15              128 
  MUM1L1 MUTATED MUM1L1 WILD-TYPE 
               6               65 
$`MUM1L1 MUTATED`
TCGA-D3-A3MV TCGA-DA-A3F5 TCGA-EE-A29H TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29V 
       21.47       215.44        32.19        56.42        14.47        25.87 
TCGA-EE-A2GH TCGA-EE-A2M5 TCGA-EE-A2MD TCGA-EE-A2MS TCGA-FS-A1ZB TCGA-FS-A1ZS 
      182.01        21.67        47.28       136.44        48.85       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZZ TCGA-GN-A268 
       53.16        27.02        62.76 

$`MUM1L1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
      121.22        58.03        71.24         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 
       65.92        23.44        68.09        28.60        10.49        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29S 
       39.62         2.56        44.35        18.58        37.35        55.89 
TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
      345.96        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI 
       58.75        47.54        43.23       314.53       135.91        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
       13.87        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       28.80        19.76        61.51       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZD TCGA-FS-A1ZE 
       20.91        28.08         7.76        27.68        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 
       74.73        11.41        26.56        49.48        27.06         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  MUM1L1 MUTATED MUM1L1 WILD-TYPE 
           14.47             0.20 
  MUM1L1 MUTATED MUM1L1 WILD-TYPE 
          215.44           345.96 
  MUM1L1 MUTATED MUM1L1 WILD-TYPE 
           48.85            47.54 
[1] "14.5 - 215.4 (48.9)" "0.2 - 346.0 (47.5)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE"   "MUM1L1 MUTATED" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
  "MUM1L1 MUTATED" "MUM1L1 WILD-TYPE" "MUM1L1 WILD-TYPE" 
[1] "hr=" "1.3"
D96V2, continuous
D96V3, binary
                  cls
clus                0  1
  MUM1L1 MUTATED    6  9
  MUM1L1 WILD-TYPE 51 80
[1] "tbl2"
                  cls
clus               [,1] [,2]
  MUM1L1 MUTATED      6    9
  MUM1L1 WILD-TYPE   51   80
        clus
vv       MUM1L1 MUTATED MUM1L1 WILD-TYPE
  FEMALE              6               51
  MALE                9               80
                  vv
clus                M0  M1 M1A M1B M1C
  MUM1L1 MUTATED    15   0   0   0   0
  MUM1L1 WILD-TYPE 109   2   1   1   2
D96V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  MUM1L1 MUTATED   10  0   0   3   1   0   0  1  0
  MUM1L1 WILD-TYPE 71  2   7   9   2   9   5  9  2
D96V5, multiclass
D96V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  MUM1L1 MUTATED         2        1        0        4         0         2
  MUM1L1 WILD-TYPE      15        8       11       14         7         6
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  MUM1L1 MUTATED           1         1          0          1          3
  MUM1L1 WILD-TYPE         6         4          6         15         13
                  vv
clus               STAGE IV
  MUM1L1 MUTATED          0
  MUM1L1 WILD-TYPE        4
D96V7, multiclass

Clustering(97) Variable = TRIM58 MUTATION ANALYSIS
D97V1, survival
                  sevent
clus2               0  1
  TRIM58 MUTATED    7  5
  TRIM58 WILD-TYPE 65 66
  TRIM58 MUTATED TRIM58 WILD-TYPE 
              12              131 
  TRIM58 MUTATED TRIM58 WILD-TYPE 
               5               66 
$`TRIM58 MUTATED`
TCGA-D9-A1JW TCGA-DA-A1IC TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A2GD TCGA-EE-A2GJ 
        2.70        68.09        39.62         2.56       314.53        89.33 
TCGA-EE-A2GO TCGA-EE-A2M5 TCGA-EE-A2MM TCGA-EE-A2MR TCGA-EE-A2MS TCGA-FS-A1Z3 
      101.95        21.67       167.87       103.56       136.44        20.91 

$`TRIM58 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       65.92        23.44        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
       32.19        44.35        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE 
       24.43        39.25        58.75        47.54        43.23       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        22.55        54.71        55.00        75.48        90.94 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
       13.87        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN 
       16.96       204.62        96.23       144.76       203.01        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      248.61        43.23        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 
       80.32       216.92        48.59       228.59       202.62        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  TRIM58 MUTATED TRIM58 WILD-TYPE 
            2.56             0.20 
  TRIM58 MUTATED TRIM58 WILD-TYPE 
          314.53           345.96 
  TRIM58 MUTATED TRIM58 WILD-TYPE 
           78.71            47.54 
[1] "2.6 - 314.5 (78.7)" "0.2 - 346.0 (47.5)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE"   "TRIM58 MUTATED" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE"   "TRIM58 MUTATED" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE"   "TRIM58 MUTATED" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TRIM58 WILD-TYPE"   "TRIM58 MUTATED"   "TRIM58 MUTATED" "TRIM58 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "TRIM58 MUTATED" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" "TRIM58 WILD-TYPE" 
[1] "hr=" "1.5"
D97V2, continuous
D97V3, binary
                  cls
clus                0  1
  TRIM58 MUTATED    4  8
  TRIM58 WILD-TYPE 53 81
[1] "tbl2"
                  cls
clus               [,1] [,2]
  TRIM58 MUTATED      4    8
  TRIM58 WILD-TYPE   53   81
        clus
vv       TRIM58 MUTATED TRIM58 WILD-TYPE
  FEMALE              4               53
  MALE                8               81
                  vv
clus                M0  M1 M1A M1B M1C
  TRIM58 MUTATED    11   0   0   0   0
  TRIM58 WILD-TYPE 113   2   1   1   2
D97V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  TRIM58 MUTATED    7  0   0   1   1   0   1  1  0
  TRIM58 WILD-TYPE 74  2   7  11   2   9   4  9  2
D97V5, multiclass
D97V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TRIM58 MUTATED         3        1        0        2         0         1
  TRIM58 WILD-TYPE      14        8       11       16         7         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  TRIM58 MUTATED           0         0          0          2          1
  TRIM58 WILD-TYPE         7         5          6         14         15
                  vv
clus               STAGE IV
  TRIM58 MUTATED          0
  TRIM58 WILD-TYPE        4
D97V7, multiclass

Clustering(98) Variable = ANKRD20A4 MUTATION ANALYSIS
D98V1, survival
                     sevent
clus2                  0  1
  ANKRD20A4 MUTATED    2  1
  ANKRD20A4 WILD-TYPE 70 70
  ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE 
                  3                 140 
  ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE 
                  1                  70 
$`ANKRD20A4 MUTATED`
TCGA-EE-A20F TCGA-EE-A29E TCGA-EE-A2MJ 
       78.87        39.62        96.23 

$`ANKRD20A4 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
       26.86         4.93       109.64       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       13.97        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       14.30        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
       16.96       204.62       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE 
              39.62                0.20 
  ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE 
              96.23              345.96 
  ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE 
              78.87               47.54 
[1] "39.6 - 96.2 (78.9)" "0.2 - 346.0 (47.5)"
         TCGA-D3-A1Q7          TCGA-D3-A3C6          TCGA-D3-A3CC 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-D3-A3MO          TCGA-D3-A3MV          TCGA-D9-A148 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-D9-A149          TCGA-D9-A1JW          TCGA-D9-A1JX 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1HV          TCGA-DA-A1HW          TCGA-DA-A1HY 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1I0          TCGA-DA-A1I1          TCGA-DA-A1I2 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1I4          TCGA-DA-A1I5          TCGA-DA-A1I7 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1I8          TCGA-DA-A1IA          TCGA-DA-A1IB 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1IC          TCGA-DA-A3F2          TCGA-DA-A3F3 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A3F5          TCGA-DA-A3F8          TCGA-EE-A17X 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A17Z          TCGA-EE-A181          TCGA-EE-A182 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A183          TCGA-EE-A185          TCGA-EE-A20B 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A20F          TCGA-EE-A20H          TCGA-EE-A29A 
  "ANKRD20A4 MUTATED" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29C          TCGA-EE-A29D          TCGA-EE-A29E 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE"   "ANKRD20A4 MUTATED" 
         TCGA-EE-A29H          TCGA-EE-A29L          TCGA-EE-A29M 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29N          TCGA-EE-A29P          TCGA-EE-A29Q 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29R          TCGA-EE-A29S          TCGA-EE-A29T 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29V          TCGA-EE-A29X          TCGA-EE-A2A0 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2A1          TCGA-EE-A2A2          TCGA-EE-A2A5 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2A6          TCGA-EE-A2GB          TCGA-EE-A2GC 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GD          TCGA-EE-A2GE          TCGA-EE-A2GH 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GI          TCGA-EE-A2GJ          TCGA-EE-A2GK 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GL          TCGA-EE-A2GM          TCGA-EE-A2GN 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GO          TCGA-EE-A2GP          TCGA-EE-A2GR 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GS          TCGA-EE-A2GT          TCGA-EE-A2GU 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2M5          TCGA-EE-A2M6          TCGA-EE-A2M7 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2M8          TCGA-EE-A2MC          TCGA-EE-A2MD 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2ME          TCGA-EE-A2MG          TCGA-EE-A2MH 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2MI          TCGA-EE-A2MJ          TCGA-EE-A2MK 
"ANKRD20A4 WILD-TYPE"   "ANKRD20A4 MUTATED" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2ML          TCGA-EE-A2MM          TCGA-EE-A2MN 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2MP          TCGA-EE-A2MQ          TCGA-EE-A2MR 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2MS          TCGA-EE-A2MT          TCGA-EE-A2MU 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A3AA          TCGA-EE-A3AB          TCGA-EE-A3AC 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A3AD          TCGA-EE-A3AE          TCGA-EE-A3AF 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A3AG          TCGA-EE-A3AH          TCGA-ER-A19D 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-ER-A19F          TCGA-ER-A19J          TCGA-ER-A19L 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-ER-A19N          TCGA-ER-A1A1          TCGA-ER-A3ET 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1YW          TCGA-FS-A1YX          TCGA-FS-A1YY 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1Z0          TCGA-FS-A1Z3          TCGA-FS-A1Z4 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1Z7          TCGA-FS-A1ZA          TCGA-FS-A1ZB 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZD          TCGA-FS-A1ZE          TCGA-FS-A1ZF 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZG          TCGA-FS-A1ZH          TCGA-FS-A1ZJ 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZK          TCGA-FS-A1ZM          TCGA-FS-A1ZP 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZR          TCGA-FS-A1ZS          TCGA-FS-A1ZT 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZU          TCGA-FS-A1ZW          TCGA-FS-A1ZY 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZZ          TCGA-FW-A3I3          TCGA-GN-A261 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-GN-A262          TCGA-GN-A264          TCGA-GN-A265 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-GN-A266          TCGA-GN-A267          TCGA-GN-A268 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-GN-A26A          TCGA-GN-A26D 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-D3-A1Q7          TCGA-D3-A3C6          TCGA-D3-A3CC 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-D3-A3MO          TCGA-D3-A3MV          TCGA-D9-A148 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-D9-A149          TCGA-D9-A1JW          TCGA-D9-A1JX 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1HV          TCGA-DA-A1HW          TCGA-DA-A1HY 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1I0          TCGA-DA-A1I1          TCGA-DA-A1I2 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1I4          TCGA-DA-A1I5          TCGA-DA-A1I7 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1I8          TCGA-DA-A1IA          TCGA-DA-A1IB 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1IC          TCGA-DA-A3F2          TCGA-DA-A3F3 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A3F5          TCGA-DA-A3F8          TCGA-EE-A17X 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A17Z          TCGA-EE-A181          TCGA-EE-A182 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A183          TCGA-EE-A185          TCGA-EE-A20B 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A20F          TCGA-EE-A20H          TCGA-EE-A29A 
  "ANKRD20A4 MUTATED" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29C          TCGA-EE-A29D          TCGA-EE-A29E 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE"   "ANKRD20A4 MUTATED" 
         TCGA-EE-A29H          TCGA-EE-A29L          TCGA-EE-A29M 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29N          TCGA-EE-A29P          TCGA-EE-A29Q 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29R          TCGA-EE-A29S          TCGA-EE-A29T 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29V          TCGA-EE-A29X          TCGA-EE-A2A0 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2A1          TCGA-EE-A2A2          TCGA-EE-A2A5 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2A6          TCGA-EE-A2GB          TCGA-EE-A2GC 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GD          TCGA-EE-A2GE          TCGA-EE-A2GH 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GI          TCGA-EE-A2GJ          TCGA-EE-A2GK 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GL          TCGA-EE-A2GM          TCGA-EE-A2GN 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GO          TCGA-EE-A2GP          TCGA-EE-A2GR 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GS          TCGA-EE-A2GT          TCGA-EE-A2GU 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2M5          TCGA-EE-A2M6          TCGA-EE-A2M7 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2M8          TCGA-EE-A2MC          TCGA-EE-A2MD 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2ME          TCGA-EE-A2MG          TCGA-EE-A2MH 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2MI          TCGA-EE-A2MJ          TCGA-EE-A2MK 
"ANKRD20A4 WILD-TYPE"   "ANKRD20A4 MUTATED" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2ML          TCGA-EE-A2MM          TCGA-EE-A2MN 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2MP          TCGA-EE-A2MQ          TCGA-EE-A2MR 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2MS          TCGA-EE-A2MT          TCGA-EE-A2MU 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A3AA          TCGA-EE-A3AB          TCGA-EE-A3AC 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A3AD          TCGA-EE-A3AE          TCGA-EE-A3AF 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A3AG          TCGA-EE-A3AH          TCGA-ER-A19D 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-ER-A19F          TCGA-ER-A19J          TCGA-ER-A19L 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-ER-A19N          TCGA-ER-A1A1          TCGA-ER-A3ET 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1YW          TCGA-FS-A1YX          TCGA-FS-A1YY 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1Z0          TCGA-FS-A1Z3          TCGA-FS-A1Z4 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1Z7          TCGA-FS-A1ZA          TCGA-FS-A1ZB 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZD          TCGA-FS-A1ZE          TCGA-FS-A1ZF 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZG          TCGA-FS-A1ZH          TCGA-FS-A1ZJ 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZK          TCGA-FS-A1ZM          TCGA-FS-A1ZP 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZR          TCGA-FS-A1ZS          TCGA-FS-A1ZT 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZU          TCGA-FS-A1ZW          TCGA-FS-A1ZY 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZZ          TCGA-FW-A3I3          TCGA-GN-A261 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-GN-A262          TCGA-GN-A264          TCGA-GN-A265 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-GN-A266          TCGA-GN-A267          TCGA-GN-A268 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-GN-A26A          TCGA-GN-A26D 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-D3-A1Q7          TCGA-D3-A3C6          TCGA-D3-A3CC 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-D3-A3MO          TCGA-D3-A3MV          TCGA-D9-A148 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-D9-A149          TCGA-D9-A1JW          TCGA-D9-A1JX 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1HV          TCGA-DA-A1HW          TCGA-DA-A1HY 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1I0          TCGA-DA-A1I1          TCGA-DA-A1I2 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1I4          TCGA-DA-A1I5          TCGA-DA-A1I7 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1I8          TCGA-DA-A1IA          TCGA-DA-A1IB 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A1IC          TCGA-DA-A3F2          TCGA-DA-A3F3 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-DA-A3F5          TCGA-DA-A3F8          TCGA-EE-A17X 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A17Z          TCGA-EE-A181          TCGA-EE-A182 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A183          TCGA-EE-A185          TCGA-EE-A20B 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A20F          TCGA-EE-A20H          TCGA-EE-A29A 
  "ANKRD20A4 MUTATED" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29C          TCGA-EE-A29D          TCGA-EE-A29E 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE"   "ANKRD20A4 MUTATED" 
         TCGA-EE-A29H          TCGA-EE-A29L          TCGA-EE-A29M 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29N          TCGA-EE-A29P          TCGA-EE-A29Q 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29R          TCGA-EE-A29S          TCGA-EE-A29T 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A29V          TCGA-EE-A29X          TCGA-EE-A2A0 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2A1          TCGA-EE-A2A2          TCGA-EE-A2A5 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2A6          TCGA-EE-A2GB          TCGA-EE-A2GC 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GD          TCGA-EE-A2GE          TCGA-EE-A2GH 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GI          TCGA-EE-A2GJ          TCGA-EE-A2GK 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GL          TCGA-EE-A2GM          TCGA-EE-A2GN 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GO          TCGA-EE-A2GP          TCGA-EE-A2GR 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2GS          TCGA-EE-A2GT          TCGA-EE-A2GU 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2M5          TCGA-EE-A2M6          TCGA-EE-A2M7 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2M8          TCGA-EE-A2MC          TCGA-EE-A2MD 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2ME          TCGA-EE-A2MG          TCGA-EE-A2MH 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2MI          TCGA-EE-A2MJ          TCGA-EE-A2MK 
"ANKRD20A4 WILD-TYPE"   "ANKRD20A4 MUTATED" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2ML          TCGA-EE-A2MM          TCGA-EE-A2MN 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2MP          TCGA-EE-A2MQ          TCGA-EE-A2MR 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A2MS          TCGA-EE-A2MT          TCGA-EE-A2MU 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A3AA          TCGA-EE-A3AB          TCGA-EE-A3AC 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A3AD          TCGA-EE-A3AE          TCGA-EE-A3AF 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-EE-A3AG          TCGA-EE-A3AH          TCGA-ER-A19D 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-ER-A19F          TCGA-ER-A19J          TCGA-ER-A19L 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-ER-A19N          TCGA-ER-A1A1          TCGA-ER-A3ET 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1YW          TCGA-FS-A1YX          TCGA-FS-A1YY 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1Z0          TCGA-FS-A1Z3          TCGA-FS-A1Z4 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1Z7          TCGA-FS-A1ZA          TCGA-FS-A1ZB 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZD          TCGA-FS-A1ZE          TCGA-FS-A1ZF 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZG          TCGA-FS-A1ZH          TCGA-FS-A1ZJ 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZK          TCGA-FS-A1ZM          TCGA-FS-A1ZP 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZR          TCGA-FS-A1ZS          TCGA-FS-A1ZT 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZU          TCGA-FS-A1ZW          TCGA-FS-A1ZY 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-FS-A1ZZ          TCGA-FW-A3I3          TCGA-GN-A261 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-GN-A262          TCGA-GN-A264          TCGA-GN-A265 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-GN-A266          TCGA-GN-A267          TCGA-GN-A268 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
         TCGA-GN-A26A          TCGA-GN-A26D 
"ANKRD20A4 WILD-TYPE" "ANKRD20A4 WILD-TYPE" 
[1] "hr=" "1.8"
D98V2, continuous
D98V3, binary
                     cls
clus                   0  1
  ANKRD20A4 MUTATED    0  3
  ANKRD20A4 WILD-TYPE 57 86
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  ANKRD20A4 MUTATED      0    3
  ANKRD20A4 WILD-TYPE   57   86
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  FEMALE                 0                  57
  MALE                   3                  86
                     vv
clus                   M0  M1 M1A M1B M1C
  ANKRD20A4 MUTATED     3   0   0   0   0
  ANKRD20A4 WILD-TYPE 121   2   1   1   2
D98V4, multiclass
                     vv
clus                  N0 N1 N1A N1B N2A N2B N2C N3 NX
  ANKRD20A4 MUTATED    2  0   0   1   0   0   0  0  0
  ANKRD20A4 WILD-TYPE 79  2   7  11   3   9   5 10  2
D98V5, multiclass
D98V6, continuous
                     vv
clus                  STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  ANKRD20A4 MUTATED         0        0        0        2         0         0
  ANKRD20A4 WILD-TYPE      17        9       11       16         7         8
                     vv
clus                  STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  ANKRD20A4 MUTATED           0         0          0          1          0
  ANKRD20A4 WILD-TYPE         7         5          6         15         16
                     vv
clus                  STAGE IV
  ANKRD20A4 MUTATED          0
  ANKRD20A4 WILD-TYPE        4
D98V7, multiclass

Clustering(99) Variable = OR5J2 MUTATION ANALYSIS
D99V1, survival
                 sevent
clus2              0  1
  OR5J2 MUTATED    6  4
  OR5J2 WILD-TYPE 66 67
  OR5J2 MUTATED OR5J2 WILD-TYPE 
             10             133 
  OR5J2 MUTATED OR5J2 WILD-TYPE 
              4              67 
$`OR5J2 MUTATED`
TCGA-DA-A3F3 TCGA-EE-A20F TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A2GO TCGA-EE-A2MP 
       10.49        78.87        13.97        32.19       101.95       248.61 
TCGA-EE-A2MT TCGA-EE-A3AE TCGA-EE-A3AF TCGA-FS-A1Z3 
       41.59        26.73        13.81        20.91 

$`OR5J2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F5 
       53.92        65.92        23.44        68.09        28.60       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E 
        4.93       109.64       168.26        63.32        47.84        39.62 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
        2.56        44.35        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       24.43        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       75.48        90.94        13.87        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       67.13        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR 
      144.76       203.01       167.87        47.54        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
      136.44        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
      202.62        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  OR5J2 MUTATED OR5J2 WILD-TYPE 
          10.49            0.20 
  OR5J2 MUTATED OR5J2 WILD-TYPE 
         248.61          345.96 
  OR5J2 MUTATED OR5J2 WILD-TYPE 
          29.46           48.59 
[1] "10.5 - 248.6 (29.5)" "0.2 - 346.0 (48.6)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR5J2 WILD-TYPE"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR5J2 WILD-TYPE"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR5J2 WILD-TYPE"   "OR5J2 MUTATED"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "OR5J2 MUTATED" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR5J2 WILD-TYPE"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR5J2 WILD-TYPE"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR5J2 WILD-TYPE"   "OR5J2 MUTATED"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "OR5J2 MUTATED" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR5J2 WILD-TYPE"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR5J2 WILD-TYPE"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE"   "OR5J2 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR5J2 WILD-TYPE"   "OR5J2 MUTATED"   "OR5J2 MUTATED" "OR5J2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
  "OR5J2 MUTATED" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" "OR5J2 WILD-TYPE" 
[1] "hr=" "1.1"
D99V2, continuous
D99V3, binary
                 cls
clus               0  1
  OR5J2 MUTATED    6  4
  OR5J2 WILD-TYPE 51 85
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR5J2 MUTATED      6    4
  OR5J2 WILD-TYPE   51   85
        clus
vv       OR5J2 MUTATED OR5J2 WILD-TYPE
  FEMALE             6              51
  MALE               4              85
                 vv
clus               M0  M1 M1A M1B M1C
  OR5J2 MUTATED     8   0   0   0   0
  OR5J2 WILD-TYPE 116   2   1   1   2
D99V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  OR5J2 MUTATED    6  0   0   1   0   1   0  0  0
  OR5J2 WILD-TYPE 75  2   7  11   3   8   5 10  2
D99V5, multiclass
D99V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OR5J2 MUTATED         1        2        1        2         0         0
  OR5J2 WILD-TYPE      16        7       10       16         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  OR5J2 MUTATED           0         0          0          1          1        0
  OR5J2 WILD-TYPE         7         5          6         15         15        4
D99V7, multiclass

Clustering(100) Variable = CLEC14A MUTATION ANALYSIS
D100V1, survival
                   sevent
clus2                0  1
  CLEC14A MUTATED    9  4
  CLEC14A WILD-TYPE 63 67
  CLEC14A MUTATED CLEC14A WILD-TYPE 
               13               130 
  CLEC14A MUTATED CLEC14A WILD-TYPE 
                4                67 
$`CLEC14A MUTATED`
TCGA-DA-A3F8 TCGA-EE-A29A TCGA-EE-A2A2 TCGA-EE-A2GS TCGA-EE-A2MJ TCGA-EE-A2MM 
       15.68        63.32        24.43        55.59        96.23       167.87 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A3AC TCGA-FS-A1ZM TCGA-FS-A1ZW TCGA-GN-A262 
      103.56       136.44        25.84       101.26        49.48       120.46 
TCGA-GN-A266 
       10.09 

$`CLEC14A WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
      215.44        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D 
        4.93       109.64        78.87       168.26        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       46.82        78.94        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       55.00        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MT 
      144.76       203.01        47.54       248.61        43.23        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
       53.26         4.24       122.73         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       44.05        79.99        80.32       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
       23.93        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 
       27.06        27.02         0.20        76.41       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  CLEC14A MUTATED CLEC14A WILD-TYPE 
            10.09              0.20 
  CLEC14A MUTATED CLEC14A WILD-TYPE 
           167.87            345.96 
  CLEC14A MUTATED CLEC14A WILD-TYPE 
            63.32             47.33 
[1] "10.1 - 167.9 (63.3)" "0.2 - 346.0 (47.3)" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
  "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
  "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
  "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
  "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
  "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"CLEC14A WILD-TYPE"   "CLEC14A MUTATED"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
  "CLEC14A MUTATED" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE"   "CLEC14A MUTATED" "CLEC14A WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" "CLEC14A WILD-TYPE" 
[1] "hr=" "1.8"
D100V2, continuous
D100V3, binary
                   cls
clus                 0  1
  CLEC14A MUTATED    3 11
  CLEC14A WILD-TYPE 54 78
[1] "tbl2"
                   cls
clus                [,1] [,2]
  CLEC14A MUTATED      3   11
  CLEC14A WILD-TYPE   54   78
        clus
vv       CLEC14A MUTATED CLEC14A WILD-TYPE
  FEMALE               3                54
  MALE                11                78
                   vv
clus                 M0  M1 M1A M1B M1C
  CLEC14A MUTATED    10   0   0   0   0
  CLEC14A WILD-TYPE 114   2   1   1   2
D100V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  CLEC14A MUTATED    5  0   2   1   0   1   1  0  0
  CLEC14A WILD-TYPE 76  2   5  11   3   8   4 10  2
D100V5, multiclass
D100V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CLEC14A MUTATED         2        0        1        2         0         0
  CLEC14A WILD-TYPE      15        9       10       16         7         8
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  CLEC14A MUTATED           0         1          1          3          0
  CLEC14A WILD-TYPE         7         4          5         13         16
                   vv
clus                STAGE IV
  CLEC14A MUTATED          0
  CLEC14A WILD-TYPE        4
D100V7, multiclass

Clustering(101) Variable = FAM19A1 MUTATION ANALYSIS
D101V1, survival
                   sevent
clus2                0  1
  FAM19A1 MUTATED    2  5
  FAM19A1 WILD-TYPE 70 66
  FAM19A1 MUTATED FAM19A1 WILD-TYPE 
                7               136 
  FAM19A1 MUTATED FAM19A1 WILD-TYPE 
                5                66 
$`FAM19A1 MUTATED`
TCGA-DA-A1HV TCGA-EE-A182 TCGA-EE-A29D TCGA-EE-A2GL TCGA-EE-A2MG TCGA-EE-A2MI 
       48.89        14.70        13.97        55.00       103.17       204.62 
TCGA-GN-A266 
       10.09 

$`FAM19A1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        33.73        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E 
      109.64        78.87       168.26        63.32        47.84        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       78.94        24.43        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK 
       61.51        47.28       103.27        16.96        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      136.44        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  FAM19A1 MUTATED FAM19A1 WILD-TYPE 
            10.09              0.20 
  FAM19A1 MUTATED FAM19A1 WILD-TYPE 
           204.62            345.96 
  FAM19A1 MUTATED FAM19A1 WILD-TYPE 
            48.89             47.54 
[1] "10.1 - 204.6 (48.9)" "0.2 - 346.0 (47.5)" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE"   "FAM19A1 MUTATED" "FAM19A1 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" "FAM19A1 WILD-TYPE" 
[1] "hr=" "1.5"
D101V2, continuous
D101V3, binary
                   cls
clus                 0  1
  FAM19A1 MUTATED    3  4
  FAM19A1 WILD-TYPE 54 85
[1] "tbl2"
                   cls
clus                [,1] [,2]
  FAM19A1 MUTATED      3    4
  FAM19A1 WILD-TYPE   54   85
        clus
vv       FAM19A1 MUTATED FAM19A1 WILD-TYPE
  FEMALE               3                54
  MALE                 4                85
                   vv
clus                 M0  M1 M1A M1B M1C
  FAM19A1 MUTATED     6   0   0   0   0
  FAM19A1 WILD-TYPE 118   2   1   1   2
D101V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  FAM19A1 MUTATED    3  0   0   2   0   1   0  0  0
  FAM19A1 WILD-TYPE 78  2   7  10   3   8   5 10  2
D101V5, multiclass
D101V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  FAM19A1 MUTATED         1        0        0        0         1         1
  FAM19A1 WILD-TYPE      16        9       11       18         6         7
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  FAM19A1 MUTATED           0         0          0          1          2
  FAM19A1 WILD-TYPE         7         5          6         15         14
                   vv
clus                STAGE IV
  FAM19A1 MUTATED          0
  FAM19A1 WILD-TYPE        4
D101V7, multiclass

Clustering(102) Variable = GK2 MUTATION ANALYSIS
D102V1, survival
               sevent
clus2            0  1
  GK2 MUTATED   11  8
  GK2 WILD-TYPE 61 63
  GK2 MUTATED GK2 WILD-TYPE 
           19           124 
  GK2 MUTATED GK2 WILD-TYPE 
            8            63 
$`GK2 MUTATED`
TCGA-D3-A3C6 TCGA-DA-A3F8 TCGA-EE-A20F TCGA-EE-A29M TCGA-EE-A2GC TCGA-EE-A2GH 
       58.03        15.68        78.87        44.35        43.23       182.01 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2MI TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AE 
      101.95        14.30       204.62       136.44        53.26        26.73 
TCGA-EE-A3AG TCGA-FS-A1YY TCGA-FS-A1ZD TCGA-FS-A1ZZ TCGA-GN-A266 TCGA-GN-A268 
       23.47       228.59        53.52        27.02        10.09        62.76 
TCGA-GN-A26A 
       32.48 

$`GK2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
      121.22        71.24         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
      109.64       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
       32.19         2.56        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       24.43        39.25        58.75        47.54       314.53       135.91 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
       16.96        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AB 
      248.61        43.23       103.56        41.59         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
       25.84         3.68        13.81       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
       48.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       48.85        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       26.56        49.48        27.06         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26D 
      117.93        84.72        64.41        39.58 

  GK2 MUTATED GK2 WILD-TYPE 
        10.09          0.20 
  GK2 MUTATED GK2 WILD-TYPE 
       228.59        345.96 
  GK2 MUTATED GK2 WILD-TYPE 
        53.26         47.54 
[1] "10.1 - 228.6 (53.3)" "0.2 - 346.0 (47.5)" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
  "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
  "GK2 MUTATED" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE"   "GK2 MUTATED" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
  "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
  "GK2 MUTATED"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
  "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
  "GK2 MUTATED" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE"   "GK2 MUTATED" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
  "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
  "GK2 MUTATED"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-D3-A1Q7    TCGA-D3-A3C6    TCGA-D3-A3CC    TCGA-D3-A3MO    TCGA-D3-A3MV 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-D9-A148    TCGA-D9-A149    TCGA-D9-A1JW    TCGA-D9-A1JX    TCGA-DA-A1HV 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A1HW    TCGA-DA-A1HY    TCGA-DA-A1I0    TCGA-DA-A1I1    TCGA-DA-A1I2 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A1I4    TCGA-DA-A1I5    TCGA-DA-A1I7    TCGA-DA-A1I8    TCGA-DA-A1IA 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A1IB    TCGA-DA-A1IC    TCGA-DA-A3F2    TCGA-DA-A3F3    TCGA-DA-A3F5 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-DA-A3F8    TCGA-EE-A17X    TCGA-EE-A17Z    TCGA-EE-A181    TCGA-EE-A182 
  "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A183    TCGA-EE-A185    TCGA-EE-A20B    TCGA-EE-A20F    TCGA-EE-A20H 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-EE-A29A    TCGA-EE-A29C    TCGA-EE-A29D    TCGA-EE-A29E    TCGA-EE-A29H 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A29L    TCGA-EE-A29M    TCGA-EE-A29N    TCGA-EE-A29P    TCGA-EE-A29Q 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A29R    TCGA-EE-A29S    TCGA-EE-A29T    TCGA-EE-A29V    TCGA-EE-A29X 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2A0    TCGA-EE-A2A1    TCGA-EE-A2A2    TCGA-EE-A2A5    TCGA-EE-A2A6 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2GB    TCGA-EE-A2GC    TCGA-EE-A2GD    TCGA-EE-A2GE    TCGA-EE-A2GH 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" 
   TCGA-EE-A2GI    TCGA-EE-A2GJ    TCGA-EE-A2GK    TCGA-EE-A2GL    TCGA-EE-A2GM 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2GN    TCGA-EE-A2GO    TCGA-EE-A2GP    TCGA-EE-A2GR    TCGA-EE-A2GS 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-EE-A2GT    TCGA-EE-A2GU    TCGA-EE-A2M5    TCGA-EE-A2M6    TCGA-EE-A2M7 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2M8    TCGA-EE-A2MC    TCGA-EE-A2MD    TCGA-EE-A2ME    TCGA-EE-A2MG 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2MH    TCGA-EE-A2MI    TCGA-EE-A2MJ    TCGA-EE-A2MK    TCGA-EE-A2ML 
"GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2MM    TCGA-EE-A2MN    TCGA-EE-A2MP    TCGA-EE-A2MQ    TCGA-EE-A2MR 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A2MS    TCGA-EE-A2MT    TCGA-EE-A2MU    TCGA-EE-A3AA    TCGA-EE-A3AB 
  "GK2 MUTATED" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-EE-A3AC    TCGA-EE-A3AD    TCGA-EE-A3AE    TCGA-EE-A3AF    TCGA-EE-A3AG 
"GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE"   "GK2 MUTATED" 
   TCGA-EE-A3AH    TCGA-ER-A19D    TCGA-ER-A19F    TCGA-ER-A19J    TCGA-ER-A19L 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-ER-A19N    TCGA-ER-A1A1    TCGA-ER-A3ET    TCGA-FS-A1YW    TCGA-FS-A1YX 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1YY    TCGA-FS-A1Z0    TCGA-FS-A1Z3    TCGA-FS-A1Z4    TCGA-FS-A1Z7 
  "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZA    TCGA-FS-A1ZB    TCGA-FS-A1ZD    TCGA-FS-A1ZE    TCGA-FS-A1ZF 
"GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZG    TCGA-FS-A1ZH    TCGA-FS-A1ZJ    TCGA-FS-A1ZK    TCGA-FS-A1ZM 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZP    TCGA-FS-A1ZR    TCGA-FS-A1ZS    TCGA-FS-A1ZT    TCGA-FS-A1ZU 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-FS-A1ZW    TCGA-FS-A1ZY    TCGA-FS-A1ZZ    TCGA-FW-A3I3    TCGA-GN-A261 
"GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" "GK2 WILD-TYPE" 
   TCGA-GN-A262    TCGA-GN-A264    TCGA-GN-A265    TCGA-GN-A266    TCGA-GN-A267 
"GK2 WILD-TYPE" "GK2 WILD-TYPE" "GK2 WILD-TYPE"   "GK2 MUTATED" "GK2 WILD-TYPE" 
   TCGA-GN-A268    TCGA-GN-A26A    TCGA-GN-A26D 
  "GK2 MUTATED"   "GK2 MUTATED" "GK2 WILD-TYPE" 
[1] "hr=" "1.4"
D102V2, continuous
D102V3, binary
               cls
clus             0  1
  GK2 MUTATED    8 11
  GK2 WILD-TYPE 49 78
[1] "tbl2"
               cls
clus            [,1] [,2]
  GK2 MUTATED      8   11
  GK2 WILD-TYPE   49   78
        clus
vv       GK2 MUTATED GK2 WILD-TYPE
  FEMALE           8            49
  MALE            11            78
               vv
clus             M0  M1 M1A M1B M1C
  GK2 MUTATED    17   0   0   0   0
  GK2 WILD-TYPE 107   2   1   1   2
D102V4, multiclass
               vv
clus            N0 N1 N1A N1B N2A N2B N2C N3 NX
  GK2 MUTATED   15  0   1   0   0   1   0  0  0
  GK2 WILD-TYPE 66  2   6  12   3   8   5 10  2
D102V5, multiclass
D102V6, continuous
               vv
clus            STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  GK2 MUTATED         1        2        2        4         2         4
  GK2 WILD-TYPE      16        7        9       14         5         4
               vv
clus            STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  GK2 MUTATED           0         0          1          1          0        0
  GK2 WILD-TYPE         7         5          5         15         16        4
D102V7, multiclass

Clustering(103) Variable = LONRF2 MUTATION ANALYSIS
D103V1, survival
                  sevent
clus2               0  1
  LONRF2 MUTATED    4  7
  LONRF2 WILD-TYPE 68 64
  LONRF2 MUTATED LONRF2 WILD-TYPE 
              11              132 
  LONRF2 MUTATED LONRF2 WILD-TYPE 
               7               64 
$`LONRF2 MUTATED`
TCGA-EE-A29L TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2MR TCGA-EE-A3AC 
        2.56       129.24        19.76        47.28       103.56        25.84 
TCGA-EE-A3AG TCGA-FS-A1Z3 TCGA-FS-A1ZZ TCGA-GN-A266 TCGA-GN-A26A 
       23.47        20.91        27.02        10.09        32.48 

$`LONRF2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N 
       47.84        13.97        39.62        32.19        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M7 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       28.80        61.51       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
       43.23       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
        3.68        26.73        13.81       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
       48.59       228.59       202.62        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 
       53.16        26.56        49.48        27.06         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26D 
      120.46       117.93        84.72        64.41        62.76        39.58 

  LONRF2 MUTATED LONRF2 WILD-TYPE 
            2.56             0.20 
  LONRF2 MUTATED LONRF2 WILD-TYPE 
          129.24           345.96 
  LONRF2 MUTATED LONRF2 WILD-TYPE 
           25.84            48.87 
[1] "2.6 - 129.2 (25.8)" "0.2 - 346.0 (48.9)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
  "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "LONRF2 MUTATED" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"LONRF2 WILD-TYPE" "LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"LONRF2 WILD-TYPE"   "LONRF2 MUTATED" "LONRF2 WILD-TYPE" 
[1] "hr=" "2.3"
D103V2, continuous
D103V3, binary
                  cls
clus                0  1
  LONRF2 MUTATED    4  7
  LONRF2 WILD-TYPE 53 82
[1] "tbl2"
                  cls
clus               [,1] [,2]
  LONRF2 MUTATED      4    7
  LONRF2 WILD-TYPE   53   82
        clus
vv       LONRF2 MUTATED LONRF2 WILD-TYPE
  FEMALE              4               53
  MALE                7               82
                  vv
clus                M0  M1 M1A M1B M1C
  LONRF2 MUTATED     7   0   0   0   0
  LONRF2 WILD-TYPE 117   2   1   1   2
D103V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  LONRF2 MUTATED    4  1   1   0   0   0   0  1  0
  LONRF2 WILD-TYPE 77  1   6  12   3   9   5  9  2
D103V5, multiclass
D103V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  LONRF2 MUTATED         2        0        0        1         0         1
  LONRF2 WILD-TYPE      15        9       11       17         7         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  LONRF2 MUTATED           0         1          1          0          1
  LONRF2 WILD-TYPE         7         4          5         16         15
                  vv
clus               STAGE IV
  LONRF2 MUTATED          0
  LONRF2 WILD-TYPE        4
D103V7, multiclass

Clustering(104) Variable = HAPLN1 MUTATION ANALYSIS
D104V1, survival
                  sevent
clus2               0  1
  HAPLN1 MUTATED    5  2
  HAPLN1 WILD-TYPE 67 69
  HAPLN1 MUTATED HAPLN1 WILD-TYPE 
               7              136 
  HAPLN1 MUTATED HAPLN1 WILD-TYPE 
               2               69 
$`HAPLN1 MUTATED`
TCGA-D9-A148 TCGA-EE-A29S TCGA-EE-A2A6 TCGA-EE-A2GI TCGA-EE-A2MP TCGA-FS-A1ZZ 
      148.31        55.89        58.75        22.55       248.61        27.02 
TCGA-GN-A266 
       10.09 

$`HAPLN1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 
      121.22        58.03        71.24         9.30        21.47        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       56.42        37.35        14.47       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GC 
       46.82        78.94        24.43        39.25        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      314.53       135.91       182.01        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ 
       96.23       144.76       203.01       167.87        47.54        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.06         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  HAPLN1 MUTATED HAPLN1 WILD-TYPE 
           10.09             0.20 
  HAPLN1 MUTATED HAPLN1 WILD-TYPE 
          248.61           345.96 
  HAPLN1 MUTATED HAPLN1 WILD-TYPE 
           55.89            47.54 
[1] "10.1 - 248.6 (55.9)" "0.2 - 346.0 (47.5)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE"   "HAPLN1 MUTATED" "HAPLN1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" "HAPLN1 WILD-TYPE" 
[1] "hr=" "2.2"
D104V2, continuous
D104V3, binary
                  cls
clus                0  1
  HAPLN1 MUTATED    2  5
  HAPLN1 WILD-TYPE 55 84
[1] "tbl2"
                  cls
clus               [,1] [,2]
  HAPLN1 MUTATED      2    5
  HAPLN1 WILD-TYPE   55   84
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  FEMALE              2               55
  MALE                5               84
                  vv
clus                M0  M1 M1A M1B M1C
  HAPLN1 MUTATED     5   0   0   1   0
  HAPLN1 WILD-TYPE 119   2   1   0   2
D104V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  HAPLN1 MUTATED    5  0   0   0   0   0   0  1  0
  HAPLN1 WILD-TYPE 76  2   7  12   3   9   5  9  2
D104V5, multiclass
D104V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  HAPLN1 MUTATED         1        2        0        0         1         1
  HAPLN1 WILD-TYPE      16        7       11       18         6         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  HAPLN1 MUTATED           0         0          0          0          0
  HAPLN1 WILD-TYPE         7         5          6         16         16
                  vv
clus               STAGE IV
  HAPLN1 MUTATED          0
  HAPLN1 WILD-TYPE        4
D104V7, multiclass

Clustering(105) Variable = NAP1L4 MUTATION ANALYSIS
D105V1, survival
                  sevent
clus2               0  1
  NAP1L4 MUTATED    2  3
  NAP1L4 WILD-TYPE 70 68
  NAP1L4 MUTATED NAP1L4 WILD-TYPE 
               5              138 
  NAP1L4 MUTATED NAP1L4 WILD-TYPE 
               3               68 
$`NAP1L4 MUTATED`
TCGA-DA-A1IB TCGA-EE-A183 TCGA-EE-A2GO TCGA-EE-A2ME TCGA-EE-A2MQ 
       23.44        26.86       101.95       103.27        43.23 

$`NAP1L4 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       53.92        65.92        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 
       15.68        29.82         8.65        33.73        14.70         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR 
       54.71        55.00        75.48        90.94        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       19.76        61.51        47.28       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       27.06        27.02         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        62.76        32.48        39.58 

  NAP1L4 MUTATED NAP1L4 WILD-TYPE 
           23.44             0.20 
  NAP1L4 MUTATED NAP1L4 WILD-TYPE 
          103.27           345.96 
  NAP1L4 MUTATED NAP1L4 WILD-TYPE 
           43.23            47.69 
[1] "23.4 - 103.3 (43.2)" "0.2 - 346.0 (47.7)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
  "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE"   "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE"   "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE"   "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
  "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
  "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE"   "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE"   "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE"   "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
  "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
  "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE"   "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE"   "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE"   "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
  "NAP1L4 MUTATED" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" "NAP1L4 WILD-TYPE" 
[1] "hr=" "1.3"
D105V2, continuous
D105V3, binary
                  cls
clus                0  1
  NAP1L4 MUTATED    3  2
  NAP1L4 WILD-TYPE 54 87
[1] "tbl2"
                  cls
clus               [,1] [,2]
  NAP1L4 MUTATED      3    2
  NAP1L4 WILD-TYPE   54   87
        clus
vv       NAP1L4 MUTATED NAP1L4 WILD-TYPE
  FEMALE              3               54
  MALE                2               87
                  vv
clus                M0  M1 M1A M1B M1C
  NAP1L4 MUTATED     5   0   0   0   0
  NAP1L4 WILD-TYPE 119   2   1   1   2
D105V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  NAP1L4 MUTATED    3  0   0   0   1   1   0  0  0
  NAP1L4 WILD-TYPE 78  2   7  12   2   8   5 10  2
D105V5, multiclass
D105V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  NAP1L4 MUTATED         2        0        0        1         0         0
  NAP1L4 WILD-TYPE      15        9       11       17         7         8
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  NAP1L4 MUTATED           0         0          1          0          1
  NAP1L4 WILD-TYPE         7         5          5         16         15
                  vv
clus               STAGE IV
  NAP1L4 MUTATED          0
  NAP1L4 WILD-TYPE        4
D105V7, multiclass

Clustering(106) Variable = CLCC1 MUTATION ANALYSIS
D106V1, survival
                 sevent
clus2              0  1
  CLCC1 MUTATED    3  4
  CLCC1 WILD-TYPE 69 67
  CLCC1 MUTATED CLCC1 WILD-TYPE 
              7             136 
  CLCC1 MUTATED CLCC1 WILD-TYPE 
              4              67 
$`CLCC1 MUTATED`
TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A2A2 TCGA-EE-A2GK TCGA-EE-A2MD TCGA-EE-A2MQ 
        8.65        26.86        24.43        54.71        47.28        43.23 
TCGA-EE-A3AG 
       23.47 

$`CLCC1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 
      215.44        15.68        29.82        33.73        14.70         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       46.82        78.94        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GL 
      314.53       135.91       182.01        22.55        89.33        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       61.51       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR 
      144.76       203.01       167.87        47.54       248.61       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      136.44        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
        3.68        26.73        13.81       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
        0.20        76.41       120.46       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  CLCC1 MUTATED CLCC1 WILD-TYPE 
           8.65            0.20 
  CLCC1 MUTATED CLCC1 WILD-TYPE 
          54.71          345.96 
  CLCC1 MUTATED CLCC1 WILD-TYPE 
          26.86           48.72 
[1] "8.7 - 54.7 (26.9)"  "0.2 - 346.0 (48.7)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" "CLCC1 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "CLCC1 MUTATED" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CLCC1 WILD-TYPE"   "CLCC1 MUTATED" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
  "CLCC1 MUTATED" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" "CLCC1 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "CLCC1 MUTATED" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CLCC1 WILD-TYPE"   "CLCC1 MUTATED" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
  "CLCC1 MUTATED" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" "CLCC1 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
  "CLCC1 MUTATED" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CLCC1 WILD-TYPE"   "CLCC1 MUTATED" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
  "CLCC1 MUTATED" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE"   "CLCC1 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" "CLCC1 WILD-TYPE" 
[1] "hr=" "2.2"
D106V2, continuous
D106V3, binary
                 cls
clus               0  1
  CLCC1 MUTATED    2  5
  CLCC1 WILD-TYPE 55 84
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CLCC1 MUTATED      2    5
  CLCC1 WILD-TYPE   55   84
        clus
vv       CLCC1 MUTATED CLCC1 WILD-TYPE
  FEMALE             2              55
  MALE               5              84
                 vv
clus               M0  M1 M1A M1B M1C
  CLCC1 MUTATED     6   0   0   0   0
  CLCC1 WILD-TYPE 118   2   1   1   2
D106V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  CLCC1 MUTATED    4  0   0   1   1   0   0  0  0
  CLCC1 WILD-TYPE 77  2   7  11   2   9   5 10  2
D106V5, multiclass
D106V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CLCC1 MUTATED         2        0        0        1         0         1
  CLCC1 WILD-TYPE      15        9       11       17         7         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  CLCC1 MUTATED           0         0          1          1          0        0
  CLCC1 WILD-TYPE         7         5          5         15         16        4
D106V7, multiclass

Clustering(107) Variable = OR52J3 MUTATION ANALYSIS
D107V1, survival
                  sevent
clus2               0  1
  OR52J3 MUTATED    3  6
  OR52J3 WILD-TYPE 69 65
  OR52J3 MUTATED OR52J3 WILD-TYPE 
               9              134 
  OR52J3 MUTATED OR52J3 WILD-TYPE 
               6               65 
$`OR52J3 MUTATED`
TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A29E TCGA-EE-A29S TCGA-EE-A2M6 TCGA-ER-A19D 
       29.82        33.73        39.62        55.89       129.24        12.59 
TCGA-FS-A1ZZ TCGA-GN-A266 TCGA-GN-A26A 
       27.02        10.09        32.48 

$`OR52J3 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
      215.44        15.68         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       14.47       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       24.43        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       19.56        67.13        21.67        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 
        0.20        76.41       120.46       117.93        84.72        64.41 
TCGA-GN-A268 TCGA-GN-A26D 
       62.76        39.58 

  OR52J3 MUTATED OR52J3 WILD-TYPE 
           10.09             0.20 
  OR52J3 MUTATED OR52J3 WILD-TYPE 
          129.24           345.96 
  OR52J3 MUTATED OR52J3 WILD-TYPE 
           32.48            48.72 
[1] "10.1 - 129.2 (32.5)" "0.2 - 346.0 (48.7)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
  "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "OR52J3 MUTATED" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"OR52J3 WILD-TYPE" "OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"OR52J3 WILD-TYPE"   "OR52J3 MUTATED" "OR52J3 WILD-TYPE" 
[1] "hr=" "2.1"
D107V2, continuous
D107V3, binary
                  cls
clus                0  1
  OR52J3 MUTATED    4  5
  OR52J3 WILD-TYPE 53 84
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR52J3 MUTATED      4    5
  OR52J3 WILD-TYPE   53   84
        clus
vv       OR52J3 MUTATED OR52J3 WILD-TYPE
  FEMALE              4               53
  MALE                5               84
                  vv
clus                M0  M1 M1A M1B M1C
  OR52J3 MUTATED     8   0   0   0   0
  OR52J3 WILD-TYPE 116   2   1   1   2
D107V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  OR52J3 MUTATED    6  0   1   1   0   0   0  0  0
  OR52J3 WILD-TYPE 75  2   6  11   3   9   5 10  2
D107V5, multiclass
D107V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OR52J3 MUTATED         1        1        1        1         1         1
  OR52J3 WILD-TYPE      16        8       10       17         6         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  OR52J3 MUTATED           0         0          1          1          0
  OR52J3 WILD-TYPE         7         5          5         15         16
                  vv
clus               STAGE IV
  OR52J3 MUTATED          0
  OR52J3 WILD-TYPE        4
D107V7, multiclass

Clustering(108) Variable = TMCO5A MUTATION ANALYSIS
D108V1, survival
                  sevent
clus2               0  1
  TMCO5A MUTATED    4  2
  TMCO5A WILD-TYPE 68 69
  TMCO5A MUTATED TMCO5A WILD-TYPE 
               6              137 
  TMCO5A MUTATED TMCO5A WILD-TYPE 
               2               69 
$`TMCO5A MUTATED`
TCGA-EE-A2GC TCGA-EE-A2GH TCGA-EE-A2M5 TCGA-EE-A2MP TCGA-EE-A3AA TCGA-FS-A1Z7 
       43.23       182.01        21.67       248.61         4.24         7.76 

$`TMCO5A WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       47.84        13.97        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ 
       58.75        47.54       314.53       135.91        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
       43.23       103.56       136.44        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
       28.08        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  TMCO5A MUTATED TMCO5A WILD-TYPE 
            4.24             0.20 
  TMCO5A MUTATED TMCO5A WILD-TYPE 
          248.61           345.96 
  TMCO5A MUTATED TMCO5A WILD-TYPE 
           32.45            47.84 
[1] "4.2 - 248.6 (32.5)" "0.2 - 346.0 (47.8)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "TMCO5A MUTATED" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE"   "TMCO5A MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "TMCO5A MUTATED" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE"   "TMCO5A MUTATED" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TMCO5A WILD-TYPE"   "TMCO5A MUTATED" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE"   "TMCO5A MUTATED" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "TMCO5A MUTATED" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE"   "TMCO5A MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "TMCO5A MUTATED" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE"   "TMCO5A MUTATED" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TMCO5A WILD-TYPE"   "TMCO5A MUTATED" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE"   "TMCO5A MUTATED" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "TMCO5A MUTATED" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE"   "TMCO5A MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "TMCO5A MUTATED" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE"   "TMCO5A MUTATED" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TMCO5A WILD-TYPE"   "TMCO5A MUTATED" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE"   "TMCO5A MUTATED" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" "TMCO5A WILD-TYPE" 
[1] "hr=" "1.9"
D108V2, continuous
D108V3, binary
                  cls
clus                0  1
  TMCO5A MUTATED    1  5
  TMCO5A WILD-TYPE 56 84
[1] "tbl2"
                  cls
clus               [,1] [,2]
  TMCO5A MUTATED      1    5
  TMCO5A WILD-TYPE   56   84
        clus
vv       TMCO5A MUTATED TMCO5A WILD-TYPE
  FEMALE              1               56
  MALE                5               84
                  vv
clus                M0  M1 M1A M1B M1C
  TMCO5A MUTATED     5   0   0   0   0
  TMCO5A WILD-TYPE 119   2   1   1   2
D108V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  TMCO5A MUTATED    4  0   0   1   0   0   0  0  0
  TMCO5A WILD-TYPE 77  2   7  11   3   9   5 10  2
D108V5, multiclass
D108V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TMCO5A MUTATED         3        0        0        0         0         1
  TMCO5A WILD-TYPE      14        9       11       18         7         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  TMCO5A MUTATED           0         0          0          0          1
  TMCO5A WILD-TYPE         7         5          6         16         15
                  vv
clus               STAGE IV
  TMCO5A MUTATED          0
  TMCO5A WILD-TYPE        4
D108V7, multiclass

Clustering(109) Variable = C4ORF22 MUTATION ANALYSIS
D109V1, survival
                   sevent
clus2                0  1
  C4ORF22 MUTATED    4  3
  C4ORF22 WILD-TYPE 68 68
  C4ORF22 MUTATED C4ORF22 WILD-TYPE 
                7               136 
  C4ORF22 MUTATED C4ORF22 WILD-TYPE 
                3                68 
$`C4ORF22 MUTATED`
TCGA-DA-A3F8 TCGA-EE-A29L TCGA-EE-A29R TCGA-EE-A2A1 TCGA-EE-A2GI TCGA-EE-A2MD 
       15.68         2.56        14.47        78.94        22.55        47.28 
TCGA-FS-A1Z3 
       20.91 

$`C4ORF22 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
      215.44        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       13.97        39.62        32.19        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       37.35        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       24.43        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      135.91       182.01        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       90.94       101.95        13.87        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       67.13        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      136.44        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
      216.92        48.59       228.59       202.62        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
        0.20        76.41       120.46       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  C4ORF22 MUTATED C4ORF22 WILD-TYPE 
             2.56              0.20 
  C4ORF22 MUTATED C4ORF22 WILD-TYPE 
            78.94            345.96 
  C4ORF22 MUTATED C4ORF22 WILD-TYPE 
            20.91             48.72 
[1] "2.6 - 78.9 (20.9)"  "0.2 - 346.0 (48.7)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
  "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
  "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
  "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
  "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
  "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
  "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
  "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
  "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"C4ORF22 WILD-TYPE"   "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
  "C4ORF22 MUTATED" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" "C4ORF22 WILD-TYPE" 
[1] "hr=" "1.8"
D109V2, continuous
D109V3, binary
                   cls
clus                 0  1
  C4ORF22 MUTATED    2  6
  C4ORF22 WILD-TYPE 55 83
[1] "tbl2"
                   cls
clus                [,1] [,2]
  C4ORF22 MUTATED      2    6
  C4ORF22 WILD-TYPE   55   83
        clus
vv       C4ORF22 MUTATED C4ORF22 WILD-TYPE
  FEMALE               2                55
  MALE                 6                83
                   vv
clus                 M0  M1 M1A M1B M1C
  C4ORF22 MUTATED     6   0   0   0   0
  C4ORF22 WILD-TYPE 118   2   1   1   2
D109V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  C4ORF22 MUTATED    3  0   0   1   0   1   0  1  0
  C4ORF22 WILD-TYPE 78  2   7  11   3   8   5  9  2
D109V5, multiclass
D109V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  C4ORF22 MUTATED         0        1        1        1         0         0
  C4ORF22 WILD-TYPE      17        8       10       17         7         8
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  C4ORF22 MUTATED           0         0          0          1          2
  C4ORF22 WILD-TYPE         7         5          6         15         14
                   vv
clus                STAGE IV
  C4ORF22 MUTATED          0
  C4ORF22 WILD-TYPE        4
D109V7, multiclass

Clustering(110) Variable = MAP2K1 MUTATION ANALYSIS
D110V1, survival
                  sevent
clus2               0  1
  MAP2K1 MUTATED    5  1
  MAP2K1 WILD-TYPE 67 70
  MAP2K1 MUTATED MAP2K1 WILD-TYPE 
               6              137 
  MAP2K1 MUTATED MAP2K1 WILD-TYPE 
               1               70 
$`MAP2K1 MUTATED`
TCGA-D3-A3MV TCGA-D9-A149 TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2M5 TCGA-EE-A2MU 
       21.47        49.74        14.47       345.96        21.67        53.26 

$`MAP2K1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A1JW 
      121.22        58.03        71.24         9.30       148.31         2.70 
TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
        6.38        48.89        36.03       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       37.35        55.89        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       24.43        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       19.56        67.13       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      103.56       136.44        41.59         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  MAP2K1 MUTATED MAP2K1 WILD-TYPE 
           14.47             0.20 
  MAP2K1 MUTATED MAP2K1 WILD-TYPE 
          345.96           314.53 
  MAP2K1 MUTATED MAP2K1 WILD-TYPE 
          35.705           47.540 
[1] "14.5 - 346.0 (35.7)" "0.2 - 314.5 (47.5)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE"   "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"MAP2K1 WILD-TYPE"   "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE"   "MAP2K1 MUTATED" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
  "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE"   "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"MAP2K1 WILD-TYPE"   "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE"   "MAP2K1 MUTATED" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
  "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
  "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE"   "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"MAP2K1 WILD-TYPE"   "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE"   "MAP2K1 MUTATED" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
  "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
  "MAP2K1 MUTATED" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" "MAP2K1 WILD-TYPE" 
[1] "hr=" "3.4"
D110V2, continuous
D110V3, binary
                  cls
clus                0  1
  MAP2K1 MUTATED    4  2
  MAP2K1 WILD-TYPE 53 87
[1] "tbl2"
                  cls
clus               [,1] [,2]
  MAP2K1 MUTATED      4    2
  MAP2K1 WILD-TYPE   53   87
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  FEMALE              4               53
  MALE                2               87
                  vv
clus                M0  M1 M1A M1B M1C
  MAP2K1 MUTATED     6   0   0   0   0
  MAP2K1 WILD-TYPE 118   2   1   1   2
D110V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  MAP2K1 MUTATED    2  0   0   2   1   0   0  0  1
  MAP2K1 WILD-TYPE 79  2   7  10   2   9   5 10  1
D110V5, multiclass
D110V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  MAP2K1 MUTATED         1        1        0        0         0         0
  MAP2K1 WILD-TYPE      16        8       11       18         7         8
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  MAP2K1 MUTATED           0         0          0          1          1
  MAP2K1 WILD-TYPE         7         5          6         15         15
                  vv
clus               STAGE IV
  MAP2K1 MUTATED          0
  MAP2K1 WILD-TYPE        4
D110V7, multiclass

Clustering(111) Variable = OR7D2 MUTATION ANALYSIS
D111V1, survival
                 sevent
clus2              0  1
  OR7D2 MUTATED    7  6
  OR7D2 WILD-TYPE 65 65
  OR7D2 MUTATED OR7D2 WILD-TYPE 
             13             130 
  OR7D2 MUTATED OR7D2 WILD-TYPE 
              6              65 
$`OR7D2 MUTATED`
TCGA-DA-A1I4 TCGA-EE-A181 TCGA-EE-A29E TCGA-EE-A29S TCGA-EE-A2GI TCGA-EE-A2GT 
       35.93        33.73        39.62        55.89        22.55        19.56 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MR TCGA-EE-A3AE TCGA-EE-A3AG TCGA-FS-A1ZK 
      204.62        96.23       103.56        26.73        23.47        23.93 
TCGA-GN-A268 
       62.76 

$`OR7D2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       194.83       176.55       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       14.47       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       24.43        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      135.91       182.01        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU 
       90.94       101.95        13.87        14.30        55.59        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.27       103.17        16.96       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
       47.54       248.61        43.23       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AH 
        4.24       122.73        25.84         3.68        13.81       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        47.38       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        32.48        39.58 

  OR7D2 MUTATED OR7D2 WILD-TYPE 
          19.56            0.20 
  OR7D2 MUTATED OR7D2 WILD-TYPE 
         204.62          345.96 
  OR7D2 MUTATED OR7D2 WILD-TYPE 
         35.930          48.215 
[1] "19.6 - 204.6 (35.9)" "0.2 - 346.0 (48.2)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR7D2 WILD-TYPE"   "OR7D2 MUTATED"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
  "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR7D2 WILD-TYPE"   "OR7D2 MUTATED"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
  "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
  "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
  "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"OR7D2 WILD-TYPE"   "OR7D2 MUTATED"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"OR7D2 WILD-TYPE"   "OR7D2 MUTATED" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE"   "OR7D2 MUTATED" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
  "OR7D2 MUTATED" "OR7D2 WILD-TYPE" "OR7D2 WILD-TYPE" 
[1] "hr=" "1"  
D111V2, continuous
D111V3, binary
                 cls
clus               0  1
  OR7D2 MUTATED    3 10
  OR7D2 WILD-TYPE 54 79
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR7D2 MUTATED      3   10
  OR7D2 WILD-TYPE   54   79
        clus
vv       OR7D2 MUTATED OR7D2 WILD-TYPE
  FEMALE             3              54
  MALE              10              79
                 vv
clus               M0  M1 M1A M1B M1C
  OR7D2 MUTATED    12   0   0   0   0
  OR7D2 WILD-TYPE 112   2   1   1   2
D111V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  OR7D2 MUTATED   10  0   0   1   0   1   0  0  0
  OR7D2 WILD-TYPE 71  2   7  11   3   8   5 10  2
D111V5, multiclass
D111V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OR7D2 MUTATED         1        2        0        3         2         2
  OR7D2 WILD-TYPE      16        7       11       15         5         6
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  OR7D2 MUTATED           0         0          0          2          0        0
  OR7D2 WILD-TYPE         7         5          6         14         16        4
D111V7, multiclass

Clustering(112) Variable = CXCR2 MUTATION ANALYSIS
D112V1, survival
                 sevent
clus2              0  1
  CXCR2 MUTATED    5  3
  CXCR2 WILD-TYPE 67 68
  CXCR2 MUTATED CXCR2 WILD-TYPE 
              8             135 
  CXCR2 MUTATED CXCR2 WILD-TYPE 
              3              68 
$`CXCR2 MUTATED`
TCGA-DA-A1HW TCGA-EE-A2GD TCGA-EE-A2GO TCGA-EE-A2MJ TCGA-EE-A2MR TCGA-EE-A2MS 
       36.03       314.53       101.95        96.23       103.56       136.44 
TCGA-FS-A1ZM TCGA-FS-A1ZZ 
      101.26        27.02 

$`CXCR2 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        48.89       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       47.54        43.23       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR 
       54.71        55.00        75.48        90.94        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
      204.62       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
       43.23        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      216.92        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
        7.76        27.68        48.85        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZR 
        9.70        32.71        47.38        23.93        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 
      148.77        53.16        26.56        49.48        27.06         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  CXCR2 MUTATED CXCR2 WILD-TYPE 
          27.02            0.20 
  CXCR2 MUTATED CXCR2 WILD-TYPE 
         314.53          345.96 
  CXCR2 MUTATED CXCR2 WILD-TYPE 
        101.605          47.380 
[1] "27.0 - 314.5 (101.6)" "0.2 - 346.0 (47.4)"  
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"CXCR2 WILD-TYPE"   "CXCR2 MUTATED"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "CXCR2 MUTATED" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "CXCR2 MUTATED" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"CXCR2 WILD-TYPE"   "CXCR2 MUTATED"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "CXCR2 MUTATED" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "CXCR2 MUTATED" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"CXCR2 WILD-TYPE"   "CXCR2 MUTATED"   "CXCR2 MUTATED" "CXCR2 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
  "CXCR2 MUTATED" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
  "CXCR2 MUTATED" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" "CXCR2 WILD-TYPE" 
[1] "hr=" "2.2"
D112V2, continuous
D112V3, binary
                 cls
clus               0  1
  CXCR2 MUTATED    4  5
  CXCR2 WILD-TYPE 53 84
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CXCR2 MUTATED      4    5
  CXCR2 WILD-TYPE   53   84
        clus
vv       CXCR2 MUTATED CXCR2 WILD-TYPE
  FEMALE             4              53
  MALE               5              84
                 vv
clus               M0  M1 M1A M1B M1C
  CXCR2 MUTATED     8   0   0   0   0
  CXCR2 WILD-TYPE 116   2   1   1   2
D112V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  CXCR2 MUTATED    6  0   0   1   0   0   1  0  0
  CXCR2 WILD-TYPE 75  2   7  11   3   9   4 10  2
D112V5, multiclass
D112V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CXCR2 MUTATED         1        0        0        3         0         2
  CXCR2 WILD-TYPE      16        9       11       15         7         6
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  CXCR2 MUTATED           0         1          0          1          0        0
  CXCR2 WILD-TYPE         7         4          6         15         16        4
D112V7, multiclass

Clustering(113) Variable = RBM22 MUTATION ANALYSIS
D113V1, survival
                 sevent
clus2              0  1
  RBM22 MUTATED    1  3
  RBM22 WILD-TYPE 71 68
  RBM22 MUTATED RBM22 WILD-TYPE 
              4             139 
  RBM22 MUTATED RBM22 WILD-TYPE 
              3              68 
$`RBM22 MUTATED`
TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A2M5 TCGA-EE-A2MS 
      168.26        13.97        21.67       136.44 

$`RBM22 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C 
       26.86         4.93       109.64        78.87        63.32        47.84 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  RBM22 MUTATED RBM22 WILD-TYPE 
          13.97            0.20 
  RBM22 MUTATED RBM22 WILD-TYPE 
         168.26          345.96 
  RBM22 MUTATED RBM22 WILD-TYPE 
         79.055          47.540 
[1] "14.0 - 168.3 (79.1)" "0.2 - 346.0 (47.5)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE"   "RBM22 MUTATED" "RBM22 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"RBM22 WILD-TYPE"   "RBM22 MUTATED" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "RBM22 MUTATED" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE"   "RBM22 MUTATED" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE"   "RBM22 MUTATED" "RBM22 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"RBM22 WILD-TYPE"   "RBM22 MUTATED" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "RBM22 MUTATED" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE"   "RBM22 MUTATED" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE"   "RBM22 MUTATED" "RBM22 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"RBM22 WILD-TYPE"   "RBM22 MUTATED" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
  "RBM22 MUTATED" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE"   "RBM22 MUTATED" "RBM22 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"RBM22 WILD-TYPE" "RBM22 WILD-TYPE" "RBM22 WILD-TYPE" 
[1] "hr=" "1.4"
D113V2, continuous
D113V3, binary
                 cls
clus               0  1
  RBM22 MUTATED    0  4
  RBM22 WILD-TYPE 57 85
[1] "tbl2"
                 cls
clus              [,1] [,2]
  RBM22 MUTATED      0    4
  RBM22 WILD-TYPE   57   85
        clus
vv       RBM22 MUTATED RBM22 WILD-TYPE
  FEMALE             0              57
  MALE               4              85
                 vv
clus               M0  M1 M1A M1B M1C
  RBM22 MUTATED     4   0   0   0   0
  RBM22 WILD-TYPE 120   2   1   1   2
D113V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  RBM22 MUTATED    3  0   0   1   0   0   0  0  0
  RBM22 WILD-TYPE 78  2   7  11   3   9   5 10  2
D113V5, multiclass
D113V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  RBM22 MUTATED         2        0        0        1         0         0
  RBM22 WILD-TYPE      15        9       11       17         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  RBM22 MUTATED           0         0          0          0          1        0
  RBM22 WILD-TYPE         7         5          6         16         15        4
D113V7, multiclass

Clustering(114) Variable = CX3CL1 MUTATION ANALYSIS
D114V1, survival
                  sevent
clus2               0  1
  CX3CL1 MUTATED    2  1
  CX3CL1 WILD-TYPE 70 70
  CX3CL1 MUTATED CX3CL1 WILD-TYPE 
               3              140 
  CX3CL1 MUTATED CX3CL1 WILD-TYPE 
               1               70 
$`CX3CL1 MUTATED`
TCGA-EE-A2GJ TCGA-EE-A3AD TCGA-FS-A1Z0 
       89.33         3.68       202.62 

$`CX3CL1 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       47.84        13.97        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       22.55        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS 
      167.87        47.54       248.61        43.23       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AE 
       41.59        53.26         4.24       122.73        25.84        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      228.59        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93       101.26        74.73        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 
       26.56        49.48        27.06        27.02         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  CX3CL1 MUTATED CX3CL1 WILD-TYPE 
            3.68             0.20 
  CX3CL1 MUTATED CX3CL1 WILD-TYPE 
          202.62           345.96 
  CX3CL1 MUTATED CX3CL1 WILD-TYPE 
           89.33            47.54 
[1] "3.7 - 202.6 (89.3)" "0.2 - 346.0 (47.5)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"CX3CL1 WILD-TYPE"   "CX3CL1 MUTATED" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
  "CX3CL1 MUTATED" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE"   "CX3CL1 MUTATED" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"CX3CL1 WILD-TYPE"   "CX3CL1 MUTATED" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
  "CX3CL1 MUTATED" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE"   "CX3CL1 MUTATED" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"CX3CL1 WILD-TYPE"   "CX3CL1 MUTATED" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
  "CX3CL1 MUTATED" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE"   "CX3CL1 MUTATED" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
[1] "hr=" "2"  
D114V2, continuous
D114V3, binary
                  cls
clus                0  1
  CX3CL1 MUTATED    1  2
  CX3CL1 WILD-TYPE 56 87
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CX3CL1 MUTATED      1    2
  CX3CL1 WILD-TYPE   56   87
        clus
vv       CX3CL1 MUTATED CX3CL1 WILD-TYPE
  FEMALE              1               56
  MALE                2               87
                  vv
clus                M0  M1 M1A M1B M1C
  CX3CL1 MUTATED     2   0   0   0   0
  CX3CL1 WILD-TYPE 122   2   1   1   2
D114V4, multiclass
[1] "Remove cluster labels:" "CX3CL1 MUTATED"        
clus
  CX3CL1 MUTATED CX3CL1 WILD-TYPE 
               2              128 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GK       TCGA-EE-A2GL       TCGA-EE-A2GM 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP       TCGA-EE-A2GR 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU       TCGA-EE-A2M5 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8       TCGA-EE-A2MC 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG       TCGA-EE-A2MH 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK       TCGA-EE-A2ML 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP       TCGA-EE-A2MQ 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT       TCGA-EE-A2MU 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A3AE       TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-ER-A19J       TCGA-ER-A19O       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z4 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1Z7       TCGA-FS-A1ZA       TCGA-FS-A1ZB       TCGA-FS-A1ZD 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZE       TCGA-FS-A1ZF       TCGA-FS-A1ZG       TCGA-FS-A1ZH 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZJ       TCGA-FS-A1ZK       TCGA-FS-A1ZM       TCGA-FS-A1ZP 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZR       TCGA-FS-A1ZS       TCGA-FS-A1ZT       TCGA-FS-A1ZU 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZW       TCGA-FS-A1ZY       TCGA-FS-A1ZZ       TCGA-FW-A3I3 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-GN-A261       TCGA-GN-A267       TCGA-GN-A268       TCGA-GN-A26A 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  CX3CL1 MUTATED    2  0   0   0   0   0   0  0  0
  CX3CL1 WILD-TYPE 79  2   7  12   3   9   5 10  2
D114V5, multiclass
[1] "Remove cluster labels:" "CX3CL1 MUTATED"        
clus
  CX3CL1 MUTATED CX3CL1 WILD-TYPE 
               2              129 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GK       TCGA-EE-A2GL       TCGA-EE-A2GM 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP       TCGA-EE-A2GR 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU       TCGA-EE-A2M5 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8       TCGA-EE-A2MC 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG       TCGA-EE-A2MH 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK       TCGA-EE-A2ML 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP       TCGA-EE-A2MQ 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT       TCGA-EE-A2MU 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A3AE       TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-ER-A19J       TCGA-ER-A19O       TCGA-ER-A1A1       TCGA-ER-A3ET 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z4 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1Z7       TCGA-FS-A1ZA       TCGA-FS-A1ZB       TCGA-FS-A1ZD 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZE       TCGA-FS-A1ZF       TCGA-FS-A1ZG       TCGA-FS-A1ZH 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZJ       TCGA-FS-A1ZK       TCGA-FS-A1ZM       TCGA-FS-A1ZP 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZR       TCGA-FS-A1ZS       TCGA-FS-A1ZT       TCGA-FS-A1ZU 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZW       TCGA-FS-A1ZY       TCGA-FS-A1ZZ       TCGA-FW-A3I3 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-GN-A261       TCGA-GN-A267       TCGA-GN-A268       TCGA-GN-A26A 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-GN-A26D 
"CX3CL1 WILD-TYPE" 
D114V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  CX3CL1 MUTATED         0        2        0        0         0         0
  CX3CL1 WILD-TYPE      17        7       11       18         7         8
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  CX3CL1 MUTATED           0         0          0          0          0
  CX3CL1 WILD-TYPE         7         5          6         16         16
                  vv
clus               STAGE IV
  CX3CL1 MUTATED          0
  CX3CL1 WILD-TYPE        4
D114V7, multiclass
[1] "Remove cluster labels:" "CX3CL1 MUTATED"        
clus
  CX3CL1 MUTATED CX3CL1 WILD-TYPE 
               2              122 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29P       TCGA-EE-A29Q 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29V       TCGA-EE-A29X 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2A0       TCGA-EE-A2A1       TCGA-EE-A2A2       TCGA-EE-A2A5 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2A6       TCGA-EE-A2GB       TCGA-EE-A2GC       TCGA-EE-A2GD 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GE       TCGA-EE-A2GH       TCGA-EE-A2GI       TCGA-EE-A2GK 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GL       TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GP       TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2GU       TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2M8       TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MG       TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MK       TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MP       TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-EE-A2MT       TCGA-EE-A2MU       TCGA-EE-A3AE       TCGA-EE-A3AH 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-ER-A19D       TCGA-ER-A19J       TCGA-ER-A19O       TCGA-ER-A1A1 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-ER-A3ET       TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA       TCGA-FS-A1ZB 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF       TCGA-FS-A1ZG 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK       TCGA-FS-A1ZM 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS       TCGA-FS-A1ZT 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY       TCGA-FS-A1ZZ 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A267       TCGA-GN-A268 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 
      TCGA-GN-A26A       TCGA-GN-A26D 
"CX3CL1 WILD-TYPE" "CX3CL1 WILD-TYPE" 

Clustering(115) Variable = IGF2BP3 MUTATION ANALYSIS
D115V1, survival
                   sevent
clus2                0  1
  IGF2BP3 MUTATED    2  1
  IGF2BP3 WILD-TYPE 70 70
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
                3               140 
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
                1                70 
$`IGF2BP3 MUTATED`
TCGA-EE-A2GJ TCGA-EE-A3AC TCGA-FS-A1ZZ 
       89.33        25.84        27.02 

$`IGF2BP3 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       47.84        13.97        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       22.55        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS 
      167.87        47.54       248.61        43.23       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE 
       41.59        53.26         4.24       122.73         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 
       53.16        26.56        49.48        27.06         0.20        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
      120.46       117.93        84.72        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
            25.84              0.20 
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
            89.33            345.96 
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
            27.02             47.69 
[1] "25.8 - 89.3 (27.0)" "0.2 - 346.0 (47.7)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"IGF2BP3 WILD-TYPE"   "IGF2BP3 MUTATED" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE"   "IGF2BP3 MUTATED" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "IGF2BP3 MUTATED" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"IGF2BP3 WILD-TYPE"   "IGF2BP3 MUTATED" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE"   "IGF2BP3 MUTATED" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "IGF2BP3 MUTATED" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"IGF2BP3 WILD-TYPE"   "IGF2BP3 MUTATED" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE"   "IGF2BP3 MUTATED" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
  "IGF2BP3 MUTATED" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
[1] "hr=" "1.1"
D115V2, continuous
D115V3, binary
                   cls
clus                 0  1
  IGF2BP3 MUTATED    1  2
  IGF2BP3 WILD-TYPE 56 87
[1] "tbl2"
                   cls
clus                [,1] [,2]
  IGF2BP3 MUTATED      1    2
  IGF2BP3 WILD-TYPE   56   87
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  FEMALE               1                56
  MALE                 2                87
                   vv
clus                 M0  M1 M1A M1B M1C
  IGF2BP3 MUTATED     2   0   0   0   0
  IGF2BP3 WILD-TYPE 122   2   1   1   2
D115V4, multiclass
[1] "Remove cluster labels:" "IGF2BP3 MUTATED"       
clus
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
                2               128 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GK        TCGA-EE-A2GL        TCGA-EE-A2GM 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP        TCGA-EE-A2GR 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU        TCGA-EE-A2M5 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8        TCGA-EE-A2MC 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG        TCGA-EE-A2MH 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK        TCGA-EE-A2ML 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP        TCGA-EE-A2MQ 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT        TCGA-EE-A2MU 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A3AE        TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-ER-A19J        TCGA-ER-A19O        TCGA-ER-A1A1        TCGA-ER-A3ET 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA        TCGA-FS-A1ZB 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF        TCGA-FS-A1ZG 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK        TCGA-FS-A1ZM 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS        TCGA-FS-A1ZT 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY        TCGA-FW-A3I3 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-GN-A261        TCGA-GN-A267        TCGA-GN-A268        TCGA-GN-A26A 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  IGF2BP3 MUTATED    2  0   0   0   0   0   0  0  0
  IGF2BP3 WILD-TYPE 79  2   7  12   3   9   5 10  2
D115V5, multiclass
[1] "Remove cluster labels:" "IGF2BP3 MUTATED"       
clus
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
                2               129 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GK        TCGA-EE-A2GL        TCGA-EE-A2GM 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP        TCGA-EE-A2GR 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU        TCGA-EE-A2M5 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8        TCGA-EE-A2MC 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG        TCGA-EE-A2MH 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK        TCGA-EE-A2ML 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP        TCGA-EE-A2MQ 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT        TCGA-EE-A2MU 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A3AE        TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-ER-A19J        TCGA-ER-A19O        TCGA-ER-A1A1        TCGA-ER-A3ET 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA        TCGA-FS-A1ZB 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF        TCGA-FS-A1ZG 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK        TCGA-FS-A1ZM 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS        TCGA-FS-A1ZT 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY        TCGA-FW-A3I3 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-GN-A261        TCGA-GN-A267        TCGA-GN-A268        TCGA-GN-A26A 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-GN-A26D 
"IGF2BP3 WILD-TYPE" 
D115V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  IGF2BP3 MUTATED         0        1        0        0         0         1
  IGF2BP3 WILD-TYPE      17        8       11       18         7         7
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  IGF2BP3 MUTATED           0         0          0          0          0
  IGF2BP3 WILD-TYPE         7         5          6         16         16
                   vv
clus                STAGE IV
  IGF2BP3 MUTATED          0
  IGF2BP3 WILD-TYPE        4
D115V7, multiclass
[1] "Remove cluster labels:" "IGF2BP3 MUTATED"       
clus
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
                2               122 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29P        TCGA-EE-A29Q 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29V        TCGA-EE-A29X 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2A0        TCGA-EE-A2A1        TCGA-EE-A2A2        TCGA-EE-A2A5 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2A6        TCGA-EE-A2GB        TCGA-EE-A2GC        TCGA-EE-A2GD 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GE        TCGA-EE-A2GH        TCGA-EE-A2GI        TCGA-EE-A2GK 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GL        TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GP        TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2GU        TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2M8        TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MG        TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MK        TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MP        TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-EE-A2MT        TCGA-EE-A2MU        TCGA-EE-A3AE        TCGA-EE-A3AH 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-ER-A19D        TCGA-ER-A19J        TCGA-ER-A19O        TCGA-ER-A1A1 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-ER-A3ET        TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1Z0        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A267        TCGA-GN-A268 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 
       TCGA-GN-A26A        TCGA-GN-A26D 
"IGF2BP3 WILD-TYPE" "IGF2BP3 WILD-TYPE" 

Clustering(116) Variable = KLRC3 MUTATION ANALYSIS
D116V1, survival
                 sevent
clus2              0  1
  KLRC3 MUTATED    3  1
  KLRC3 WILD-TYPE 69 70
  KLRC3 MUTATED KLRC3 WILD-TYPE 
              4             139 
  KLRC3 MUTATED KLRC3 WILD-TYPE 
              1              70 
$`KLRC3 MUTATED`
TCGA-D9-A1JW TCGA-DA-A1HW TCGA-EE-A2ML TCGA-EE-A3AE 
        2.70        36.03       203.01        26.73 

$`KLRC3 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
       49.74         6.38        48.89       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       14.30        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MN 
       16.96       204.62        96.23       144.76       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24       122.73        25.84         3.68        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  KLRC3 MUTATED KLRC3 WILD-TYPE 
            2.7             0.2 
  KLRC3 MUTATED KLRC3 WILD-TYPE 
         203.01          345.96 
  KLRC3 MUTATED KLRC3 WILD-TYPE 
          31.38           47.84 
[1] "2.7 - 203.0 (31.4)" "0.2 - 346.0 (47.8)"
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE"   "KLRC3 MUTATED" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE"   "KLRC3 MUTATED" "KLRC3 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "KLRC3 MUTATED" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"KLRC3 WILD-TYPE"   "KLRC3 MUTATED" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE"   "KLRC3 MUTATED" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE"   "KLRC3 MUTATED" "KLRC3 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "KLRC3 MUTATED" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"KLRC3 WILD-TYPE"   "KLRC3 MUTATED" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE"   "KLRC3 MUTATED" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE"   "KLRC3 MUTATED" "KLRC3 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
  "KLRC3 MUTATED" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"KLRC3 WILD-TYPE"   "KLRC3 MUTATED" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" "KLRC3 WILD-TYPE" 
[1] "hr=" "1.9"
D116V2, continuous
D116V3, binary
                 cls
clus               0  1
  KLRC3 MUTATED    2  2
  KLRC3 WILD-TYPE 55 87
[1] "tbl2"
                 cls
clus              [,1] [,2]
  KLRC3 MUTATED      2    2
  KLRC3 WILD-TYPE   55   87
        clus
vv       KLRC3 MUTATED KLRC3 WILD-TYPE
  FEMALE             2              55
  MALE               2              87
                 vv
clus               M0  M1 M1A M1B M1C
  KLRC3 MUTATED     4   0   0   0   0
  KLRC3 WILD-TYPE 120   2   1   1   2
D116V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  KLRC3 MUTATED    2  0   0   1   1   0   0  0  0
  KLRC3 WILD-TYPE 79  2   7  11   2   9   5 10  2
D116V5, multiclass
D116V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  KLRC3 MUTATED         0        1        0        1         0         0
  KLRC3 WILD-TYPE      17        8       11       17         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  KLRC3 MUTATED           0         0          0          1          0        0
  KLRC3 WILD-TYPE         7         5          6         15         16        4
D116V7, multiclass

Clustering(117) Variable = LRRIQ4 MUTATION ANALYSIS
D117V1, survival
                  sevent
clus2               0  1
  LRRIQ4 MUTATED    8  6
  LRRIQ4 WILD-TYPE 64 65
  LRRIQ4 MUTATED LRRIQ4 WILD-TYPE 
              14              129 
  LRRIQ4 MUTATED LRRIQ4 WILD-TYPE 
               6               65 
$`LRRIQ4 MUTATED`
TCGA-DA-A1HV TCGA-EE-A29D TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GM TCGA-EE-A2GR 
       48.89        13.97        39.25        43.23        75.48        14.30 
TCGA-EE-A2GS TCGA-EE-A2MD TCGA-EE-A2MJ TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A2MS 
       55.59        47.28        96.23       167.87       248.61       136.44 
TCGA-ER-A3ET TCGA-FS-A1ZF 
       80.32        15.45 

$`LRRIQ4 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD 
       46.82        78.94        24.43        58.75        47.54       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       90.94       101.95        13.87        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
      129.24        28.80        19.76        61.51       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MQ 
       16.96       204.62       144.76       203.01        47.54        43.23 
TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      103.56        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW 
       26.37         6.41       131.08        44.05        79.99       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZH 
       27.68        48.85        53.52        40.27         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  LRRIQ4 MUTATED LRRIQ4 WILD-TYPE 
           13.97             0.20 
  LRRIQ4 MUTATED LRRIQ4 WILD-TYPE 
          248.61           345.96 
  LRRIQ4 MUTATED LRRIQ4 WILD-TYPE 
           52.24            47.54 
[1] "14.0 - 248.6 (52.2)" "0.2 - 346.0 (47.5)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
  "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "LRRIQ4 MUTATED"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
  "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "LRRIQ4 MUTATED"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
  "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "LRRIQ4 MUTATED"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE"   "LRRIQ4 MUTATED" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" "LRRIQ4 WILD-TYPE" 
[1] "hr=" "1.4"
D117V2, continuous
D117V3, binary
                  cls
clus                0  1
  LRRIQ4 MUTATED    7  7
  LRRIQ4 WILD-TYPE 50 82
[1] "tbl2"
                  cls
clus               [,1] [,2]
  LRRIQ4 MUTATED      7    7
  LRRIQ4 WILD-TYPE   50   82
        clus
vv       LRRIQ4 MUTATED LRRIQ4 WILD-TYPE
  FEMALE              7               50
  MALE                7               82
                  vv
clus                M0  M1 M1A M1B M1C
  LRRIQ4 MUTATED    14   0   0   0   0
  LRRIQ4 WILD-TYPE 110   2   1   1   2
D117V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  LRRIQ4 MUTATED   11  0   1   1   0   1   0  0  0
  LRRIQ4 WILD-TYPE 70  2   6  11   3   8   5 10  2
D117V5, multiclass
D117V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  LRRIQ4 MUTATED         2        0        2        4         0         1
  LRRIQ4 WILD-TYPE      15        9        9       14         7         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  LRRIQ4 MUTATED           2         0          1          1          1
  LRRIQ4 WILD-TYPE         5         5          5         15         15
                  vv
clus               STAGE IV
  LRRIQ4 MUTATED          0
  LRRIQ4 WILD-TYPE        4
D117V7, multiclass

Clustering(118) Variable = NR1H4 MUTATION ANALYSIS
D118V1, survival
                 sevent
clus2              0  1
  NR1H4 MUTATED    6  2
  NR1H4 WILD-TYPE 66 69
  NR1H4 MUTATED NR1H4 WILD-TYPE 
              8             135 
  NR1H4 MUTATED NR1H4 WILD-TYPE 
              2              69 
$`NR1H4 MUTATED`
TCGA-DA-A1HV TCGA-DA-A1I1 TCGA-DA-A3F8 TCGA-EE-A2GB TCGA-EE-A2MH TCGA-EE-A2MT 
       48.89       194.83        15.68        47.54        16.96        41.59 
TCGA-EE-A3AB TCGA-FS-A1ZA 
      122.73        27.68 

$`NR1H4 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       49.74         2.70         6.38        36.03       117.17        20.38 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17X 
       23.44        68.09        28.60        10.49       215.44        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
        8.65        33.73        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       78.87       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GD 
       78.94        24.43        39.25        58.75        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2MJ 
       61.51        47.28       103.27       103.17       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AD 
      103.56       136.44        53.26         4.24        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
       26.73        13.81        23.47       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW 
        6.41       131.08        44.05        79.99        80.32       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       48.59       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  NR1H4 MUTATED NR1H4 WILD-TYPE 
          15.68            0.20 
  NR1H4 MUTATED NR1H4 WILD-TYPE 
         194.83          345.96 
  NR1H4 MUTATED NR1H4 WILD-TYPE 
         44.565          47.840 
[1] "15.7 - 194.8 (44.6)" "0.2 - 346.0 (47.8)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
  "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
  "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
  "NR1H4 MUTATED" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" "NR1H4 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE"   "NR1H4 MUTATED" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" "NR1H4 WILD-TYPE" 
[1] "hr=" "1.9"
D118V2, continuous
D118V3, binary
                 cls
clus               0  1
  NR1H4 MUTATED    2  6
  NR1H4 WILD-TYPE 55 83
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NR1H4 MUTATED      2    6
  NR1H4 WILD-TYPE   55   83
        clus
vv       NR1H4 MUTATED NR1H4 WILD-TYPE
  FEMALE             2              55
  MALE               6              83
                 vv
clus               M0  M1 M1A M1B M1C
  NR1H4 MUTATED     7   0   0   0   0
  NR1H4 WILD-TYPE 117   2   1   1   2
D118V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  NR1H4 MUTATED    2  0   1   0   0   2   1  1  0
  NR1H4 WILD-TYPE 79  2   6  12   3   7   4  9  2
D118V5, multiclass
D118V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  NR1H4 MUTATED         0        0        1        1         0         0
  NR1H4 WILD-TYPE      17        9       10       17         7         8
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  NR1H4 MUTATED           0         0          1          3          1        0
  NR1H4 WILD-TYPE         7         5          5         13         15        4
D118V7, multiclass

Clustering(119) Variable = OR4A15 MUTATION ANALYSIS
D119V1, survival
                  sevent
clus2               0  1
  OR4A15 MUTATED    7  7
  OR4A15 WILD-TYPE 65 64
  OR4A15 MUTATED OR4A15 WILD-TYPE 
              14              129 
  OR4A15 MUTATED OR4A15 WILD-TYPE 
               7               64 
$`OR4A15 MUTATED`
TCGA-DA-A1I1 TCGA-EE-A182 TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29V TCGA-EE-A2A2 
      194.83        14.70       168.26        13.97        25.87        24.43 
TCGA-EE-A2GC TCGA-EE-A2GH TCGA-EE-A2M6 TCGA-EE-A2MD TCGA-EE-A2MJ TCGA-EE-A3AA 
       43.23       182.01       129.24        47.28        96.23         4.24 
TCGA-FS-A1Z3 TCGA-GN-A265 
       20.91        84.72 

$`OR4A15 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        33.73        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H 
      109.64        78.87        63.32        47.84        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
        2.56        44.35        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 
       55.89       345.96        17.92        46.82        78.94        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ 
       58.75        47.54       314.53       135.91        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13        21.67        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       19.76        61.51       103.27       103.17        16.96       204.62 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC 
      103.56       136.44        41.59        53.26       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
      216.92        48.59       228.59       202.62        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
      148.77        53.16        26.56        49.48        27.06        27.02 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 
        0.20        76.41       120.46       117.93        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  OR4A15 MUTATED OR4A15 WILD-TYPE 
            4.24             0.20 
  OR4A15 MUTATED OR4A15 WILD-TYPE 
          194.83           345.96 
  OR4A15 MUTATED OR4A15 WILD-TYPE 
          45.255           47.840 
[1] "4.2 - 194.8 (45.3)" "0.2 - 346.0 (47.8)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE"   "OR4A15 MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE"   "OR4A15 MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE"   "OR4A15 MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
  "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"OR4A15 WILD-TYPE"   "OR4A15 MUTATED" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" "OR4A15 WILD-TYPE" 
[1] "hr=" "1"  
D119V2, continuous
D119V3, binary
                  cls
clus                0  1
  OR4A15 MUTATED    2 12
  OR4A15 WILD-TYPE 55 77
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR4A15 MUTATED      2   12
  OR4A15 WILD-TYPE   55   77
        clus
vv       OR4A15 MUTATED OR4A15 WILD-TYPE
  FEMALE              2               55
  MALE               12               77
                  vv
clus                M0  M1 M1A M1B M1C
  OR4A15 MUTATED    11   0   0   0   0
  OR4A15 WILD-TYPE 113   2   1   1   2
D119V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  OR4A15 MUTATED    6  0   0   4   0   0   0  1  0
  OR4A15 WILD-TYPE 75  2   7   8   3   9   5  9  2
D119V5, multiclass
D119V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OR4A15 MUTATED         3        0        0        2         0         1
  OR4A15 WILD-TYPE      14        9       11       16         7         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  OR4A15 MUTATED           0         0          0          1          4
  OR4A15 WILD-TYPE         7         5          6         15         12
                  vv
clus               STAGE IV
  OR4A15 MUTATED          0
  OR4A15 WILD-TYPE        4
D119V7, multiclass

Clustering(120) Variable = MAGEA4 MUTATION ANALYSIS
D120V1, survival
                  sevent
clus2               0  1
  MAGEA4 MUTATED    4  3
  MAGEA4 WILD-TYPE 68 68
  MAGEA4 MUTATED MAGEA4 WILD-TYPE 
               7              136 
  MAGEA4 MUTATED MAGEA4 WILD-TYPE 
               3               68 
$`MAGEA4 MUTATED`
TCGA-DA-A1I5 TCGA-EE-A2GE TCGA-EE-A2GP TCGA-EE-A2GT TCGA-EE-A2ML TCGA-FS-A1ZZ 
      107.34       135.91        13.87        19.56       203.01        27.02 
TCGA-GN-A266 
       10.09 

$`MAGEA4 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       194.83       176.55        35.93        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       47.54        43.23       314.53       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR 
       54.71        55.00        75.48        90.94       101.95        14.30 
TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
       96.23       144.76       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.06         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  MAGEA4 MUTATED MAGEA4 WILD-TYPE 
           10.09             0.20 
  MAGEA4 MUTATED MAGEA4 WILD-TYPE 
          203.01           345.96 
  MAGEA4 MUTATED MAGEA4 WILD-TYPE 
           27.02            47.69 
[1] "10.1 - 203.0 (27.0)" "0.2 - 346.0 (47.7)" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
  "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
  "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
  "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
  "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
  "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
  "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
  "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE"   "MAGEA4 MUTATED" "MAGEA4 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" "MAGEA4 WILD-TYPE" 
[1] "hr=" "1.1"
D120V2, continuous
D120V3, binary
                  cls
clus                0  1
  MAGEA4 MUTATED    2  5
  MAGEA4 WILD-TYPE 55 84
[1] "tbl2"
                  cls
clus               [,1] [,2]
  MAGEA4 MUTATED      2    5
  MAGEA4 WILD-TYPE   55   84
        clus
vv       MAGEA4 MUTATED MAGEA4 WILD-TYPE
  FEMALE              2               55
  MALE                5               84
                  vv
clus                M0  M1 M1A M1B M1C
  MAGEA4 MUTATED     5   0   0   0   1
  MAGEA4 WILD-TYPE 119   2   1   1   1
D120V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  MAGEA4 MUTATED    5  0   1   0   0   0   0  0  0
  MAGEA4 WILD-TYPE 76  2   6  12   3   9   5 10  2
D120V5, multiclass
D120V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  MAGEA4 MUTATED         1        0        0        1         1         1
  MAGEA4 WILD-TYPE      16        9       11       17         6         7
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  MAGEA4 MUTATED           0         0          0          1          0
  MAGEA4 WILD-TYPE         7         5          6         15         16
                  vv
clus               STAGE IV
  MAGEA4 MUTATED          1
  MAGEA4 WILD-TYPE        3
D120V7, multiclass

Clustering(121) Variable = DGAT2L6 MUTATION ANALYSIS
D121V1, survival
                   sevent
clus2                0  1
  DGAT2L6 MUTATED    5  3
  DGAT2L6 WILD-TYPE 67 68
  DGAT2L6 MUTATED DGAT2L6 WILD-TYPE 
                8               135 
  DGAT2L6 MUTATED DGAT2L6 WILD-TYPE 
                3                68 
$`DGAT2L6 MUTATED`
TCGA-D9-A1JW TCGA-DA-A1HY TCGA-EE-A182 TCGA-EE-A29D TCGA-EE-A29M TCGA-EE-A29S 
        2.70       117.17        14.70        13.97        44.35        55.89 
TCGA-EE-A2MJ TCGA-EE-A2MP 
       96.23       248.61 

$`DGAT2L6 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I0 TCGA-DA-A1I1 
       49.74         6.38        48.89        36.03        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        33.73        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H 
       78.87       168.26        63.32        47.84        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29T 
        2.56        18.58        56.42        37.35        14.47       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
      101.95        13.87        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML 
      103.27       103.17        16.96       204.62       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
      167.87        47.54        43.23       103.56       136.44        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.32       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
       48.85        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       47.38        23.93       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 
       53.16        26.56        49.48        27.06        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 
       76.41       120.46       117.93        84.72        10.09        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  DGAT2L6 MUTATED DGAT2L6 WILD-TYPE 
              2.7               0.2 
  DGAT2L6 MUTATED DGAT2L6 WILD-TYPE 
           248.61            345.96 
  DGAT2L6 MUTATED DGAT2L6 WILD-TYPE 
            50.12             47.54 
[1] "2.7 - 248.6 (50.1)" "0.2 - 346.0 (47.5)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE"   "DGAT2L6 MUTATED" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" "DGAT2L6 WILD-TYPE" 
[1] "hr=" "1.5"
D121V2, continuous
D121V3, binary
                   cls
clus                 0  1
  DGAT2L6 MUTATED    3  5
  DGAT2L6 WILD-TYPE 54 84
[1] "tbl2"
                   cls
clus                [,1] [,2]
  DGAT2L6 MUTATED      3    5
  DGAT2L6 WILD-TYPE   54   84
        clus
vv       DGAT2L6 MUTATED DGAT2L6 WILD-TYPE
  FEMALE               3                54
  MALE                 5                84
                   vv
clus                 M0  M1 M1A M1B M1C
  DGAT2L6 MUTATED     8   0   0   0   0
  DGAT2L6 WILD-TYPE 116   2   1   1   2
D121V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  DGAT2L6 MUTATED    4  0   0   2   1   0   0  1  0
  DGAT2L6 WILD-TYPE 77  2   7  10   2   9   5  9  2
D121V5, multiclass
D121V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  DGAT2L6 MUTATED         1        0        1        1         1         0
  DGAT2L6 WILD-TYPE      16        9       10       17         6         8
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  DGAT2L6 MUTATED           0         0          0          0          3
  DGAT2L6 WILD-TYPE         7         5          6         16         13
                   vv
clus                STAGE IV
  DGAT2L6 MUTATED          0
  DGAT2L6 WILD-TYPE        4
D121V7, multiclass

Clustering(122) Variable = RGS18 MUTATION ANALYSIS
D122V1, survival
                 sevent
clus2              0  1
  RGS18 MUTATED    4  3
  RGS18 WILD-TYPE 68 68
  RGS18 MUTATED RGS18 WILD-TYPE 
              7             136 
  RGS18 MUTATED RGS18 WILD-TYPE 
              3              68 
$`RGS18 MUTATED`
TCGA-DA-A1I4 TCGA-EE-A2A1 TCGA-EE-A2GC TCGA-EE-A2GJ TCGA-EE-A2GP TCGA-FS-A1ZS 
       35.93        78.94        43.23        89.33        13.87       148.77 
TCGA-GN-A266 
       10.09 

$`RGS18 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       194.83       176.55       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       17.92        46.82        24.43        39.25        58.75        47.54 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL 
      314.53       135.91       182.01        22.55        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       75.48        90.94       101.95        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       67.13        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ 
      144.76       203.01       167.87        47.54       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      103.56       136.44        41.59        53.26         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       74.73        11.41        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  RGS18 MUTATED RGS18 WILD-TYPE 
          10.09            0.20 
  RGS18 MUTATED RGS18 WILD-TYPE 
         148.77          345.96 
  RGS18 MUTATED RGS18 WILD-TYPE 
          43.23           47.69 
[1] "10.1 - 148.8 (43.2)" "0.2 - 346.0 (47.7)" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "RGS18 MUTATED" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"RGS18 WILD-TYPE"   "RGS18 MUTATED" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" "RGS18 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "RGS18 MUTATED" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"RGS18 WILD-TYPE"   "RGS18 MUTATED" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" "RGS18 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-D3-A1Q7      TCGA-D3-A3C6      TCGA-D3-A3CC      TCGA-D3-A3MO 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-D3-A3MV      TCGA-D9-A148      TCGA-D9-A149      TCGA-D9-A1JW 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-D9-A1JX      TCGA-DA-A1HV      TCGA-DA-A1HW      TCGA-DA-A1HY 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-DA-A1I0      TCGA-DA-A1I1      TCGA-DA-A1I2      TCGA-DA-A1I4 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-DA-A1I5      TCGA-DA-A1I7      TCGA-DA-A1I8      TCGA-DA-A1IA 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-DA-A1IB      TCGA-DA-A1IC      TCGA-DA-A3F2      TCGA-DA-A3F3 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-DA-A3F5      TCGA-DA-A3F8      TCGA-EE-A17X      TCGA-EE-A17Z 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A181      TCGA-EE-A182      TCGA-EE-A183      TCGA-EE-A185 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A20B      TCGA-EE-A20F      TCGA-EE-A20H      TCGA-EE-A29A 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29C      TCGA-EE-A29D      TCGA-EE-A29E      TCGA-EE-A29H 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29L      TCGA-EE-A29M      TCGA-EE-A29N      TCGA-EE-A29P 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29Q      TCGA-EE-A29R      TCGA-EE-A29S      TCGA-EE-A29T 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A29V      TCGA-EE-A29X      TCGA-EE-A2A0      TCGA-EE-A2A1 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-EE-A2A2      TCGA-EE-A2A5      TCGA-EE-A2A6      TCGA-EE-A2GB 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2GC      TCGA-EE-A2GD      TCGA-EE-A2GE      TCGA-EE-A2GH 
  "RGS18 MUTATED" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2GI      TCGA-EE-A2GJ      TCGA-EE-A2GK      TCGA-EE-A2GL 
"RGS18 WILD-TYPE"   "RGS18 MUTATED" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2GM      TCGA-EE-A2GN      TCGA-EE-A2GO      TCGA-EE-A2GP 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-EE-A2GR      TCGA-EE-A2GS      TCGA-EE-A2GT      TCGA-EE-A2GU 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2M5      TCGA-EE-A2M6      TCGA-EE-A2M7      TCGA-EE-A2M8 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MC      TCGA-EE-A2MD      TCGA-EE-A2ME      TCGA-EE-A2MG 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MH      TCGA-EE-A2MI      TCGA-EE-A2MJ      TCGA-EE-A2MK 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2ML      TCGA-EE-A2MM      TCGA-EE-A2MN      TCGA-EE-A2MP 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MQ      TCGA-EE-A2MR      TCGA-EE-A2MS      TCGA-EE-A2MT 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A2MU      TCGA-EE-A3AA      TCGA-EE-A3AB      TCGA-EE-A3AC 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A3AD      TCGA-EE-A3AE      TCGA-EE-A3AF      TCGA-EE-A3AG 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-EE-A3AH      TCGA-ER-A19D      TCGA-ER-A19F      TCGA-ER-A19J 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-ER-A19L      TCGA-ER-A19N      TCGA-ER-A1A1      TCGA-ER-A3ET 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1YW      TCGA-FS-A1YX      TCGA-FS-A1YY      TCGA-FS-A1Z0 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1Z3      TCGA-FS-A1Z4      TCGA-FS-A1Z7      TCGA-FS-A1ZA 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZB      TCGA-FS-A1ZD      TCGA-FS-A1ZE      TCGA-FS-A1ZF 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZG      TCGA-FS-A1ZH      TCGA-FS-A1ZJ      TCGA-FS-A1ZK 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZM      TCGA-FS-A1ZP      TCGA-FS-A1ZR      TCGA-FS-A1ZS 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" 
     TCGA-FS-A1ZT      TCGA-FS-A1ZU      TCGA-FS-A1ZW      TCGA-FS-A1ZY 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-FS-A1ZZ      TCGA-FW-A3I3      TCGA-GN-A261      TCGA-GN-A262 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
     TCGA-GN-A264      TCGA-GN-A265      TCGA-GN-A266      TCGA-GN-A267 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE"   "RGS18 MUTATED" "RGS18 WILD-TYPE" 
     TCGA-GN-A268      TCGA-GN-A26A      TCGA-GN-A26D 
"RGS18 WILD-TYPE" "RGS18 WILD-TYPE" "RGS18 WILD-TYPE" 
[1] "hr=" "1"  
D122V2, continuous
D122V3, binary
                 cls
clus               0  1
  RGS18 MUTATED    0  7
  RGS18 WILD-TYPE 57 82
[1] "tbl2"
                 cls
clus              [,1] [,2]
  RGS18 MUTATED      0    7
  RGS18 WILD-TYPE   57   82
        clus
vv       RGS18 MUTATED RGS18 WILD-TYPE
  FEMALE             0              57
  MALE               7              82
                 vv
clus               M0  M1 M1A M1B M1C
  RGS18 MUTATED     6   0   0   0   0
  RGS18 WILD-TYPE 118   2   1   1   2
D122V4, multiclass
                 vv
clus              N0 N1 N1A N1B N2A N2B N2C N3 NX
  RGS18 MUTATED    4  0   1   0   0   1   0  0  0
  RGS18 WILD-TYPE 77  2   6  12   3   8   5 10  2
D122V5, multiclass
D122V6, continuous
                 vv
clus              STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  RGS18 MUTATED         0        1        1        1         0         1
  RGS18 WILD-TYPE      17        8       10       17         7         7
                 vv
clus              STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  RGS18 MUTATED           0         0          0          2          0        0
  RGS18 WILD-TYPE         7         5          6         14         16        4
D122V7, multiclass

Clustering(123) Variable = TSGA13 MUTATION ANALYSIS
D123V1, survival
                  sevent
clus2               0  1
  TSGA13 MUTATED    5  1
  TSGA13 WILD-TYPE 67 70
  TSGA13 MUTATED TSGA13 WILD-TYPE 
               6              137 
  TSGA13 MUTATED TSGA13 WILD-TYPE 
               1               70 
$`TSGA13 MUTATED`
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GR TCGA-EE-A2M6 TCGA-EE-A3AA TCGA-FS-A1ZJ 
      182.01        22.55        14.30       129.24         4.24        47.38 

$`TSGA13 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       47.84        13.97        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GJ 
       58.75        47.54        43.23       314.53       135.91        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        19.56        67.13        21.67        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
       43.23       103.56       136.44        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
       27.02         0.20        76.41       120.46       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        64.41        62.76        32.48        39.58 

  TSGA13 MUTATED TSGA13 WILD-TYPE 
            4.24             0.20 
  TSGA13 MUTATED TSGA13 WILD-TYPE 
          182.01           345.96 
  TSGA13 MUTATED TSGA13 WILD-TYPE 
          34.965           47.840 
[1] "4.2 - 182.0 (35.0)" "0.2 - 346.0 (47.8)"
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE"   "TSGA13 MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"TSGA13 WILD-TYPE"   "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TSGA13 WILD-TYPE"   "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE"   "TSGA13 MUTATED" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE"   "TSGA13 MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"TSGA13 WILD-TYPE"   "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TSGA13 WILD-TYPE"   "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE"   "TSGA13 MUTATED" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-D3-A1Q7       TCGA-D3-A3C6       TCGA-D3-A3CC       TCGA-D3-A3MO 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-D3-A3MV       TCGA-D9-A148       TCGA-D9-A149       TCGA-D9-A1JW 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-D9-A1JX       TCGA-DA-A1HV       TCGA-DA-A1HW       TCGA-DA-A1HY 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A1I0       TCGA-DA-A1I1       TCGA-DA-A1I2       TCGA-DA-A1I4 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A1I5       TCGA-DA-A1I7       TCGA-DA-A1I8       TCGA-DA-A1IA 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A1IB       TCGA-DA-A1IC       TCGA-DA-A3F2       TCGA-DA-A3F3 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-DA-A3F5       TCGA-DA-A3F8       TCGA-EE-A17X       TCGA-EE-A17Z 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A181       TCGA-EE-A182       TCGA-EE-A183       TCGA-EE-A185 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A20B       TCGA-EE-A20F       TCGA-EE-A20H       TCGA-EE-A29A 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29C       TCGA-EE-A29D       TCGA-EE-A29E       TCGA-EE-A29H 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29L       TCGA-EE-A29M       TCGA-EE-A29N       TCGA-EE-A29P 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29Q       TCGA-EE-A29R       TCGA-EE-A29S       TCGA-EE-A29T 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A29V       TCGA-EE-A29X       TCGA-EE-A2A0       TCGA-EE-A2A1 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2A2       TCGA-EE-A2A5       TCGA-EE-A2A6       TCGA-EE-A2GB 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2GC       TCGA-EE-A2GD       TCGA-EE-A2GE       TCGA-EE-A2GH 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE"   "TSGA13 MUTATED" 
      TCGA-EE-A2GI       TCGA-EE-A2GJ       TCGA-EE-A2GK       TCGA-EE-A2GL 
  "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2GM       TCGA-EE-A2GN       TCGA-EE-A2GO       TCGA-EE-A2GP 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2GR       TCGA-EE-A2GS       TCGA-EE-A2GT       TCGA-EE-A2GU 
  "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2M5       TCGA-EE-A2M6       TCGA-EE-A2M7       TCGA-EE-A2M8 
"TSGA13 WILD-TYPE"   "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MC       TCGA-EE-A2MD       TCGA-EE-A2ME       TCGA-EE-A2MG 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MH       TCGA-EE-A2MI       TCGA-EE-A2MJ       TCGA-EE-A2MK 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2ML       TCGA-EE-A2MM       TCGA-EE-A2MN       TCGA-EE-A2MP 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MQ       TCGA-EE-A2MR       TCGA-EE-A2MS       TCGA-EE-A2MT 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A2MU       TCGA-EE-A3AA       TCGA-EE-A3AB       TCGA-EE-A3AC 
"TSGA13 WILD-TYPE"   "TSGA13 MUTATED" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A3AD       TCGA-EE-A3AE       TCGA-EE-A3AF       TCGA-EE-A3AG 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-EE-A3AH       TCGA-ER-A19D       TCGA-ER-A19F       TCGA-ER-A19J 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-ER-A19L       TCGA-ER-A19N       TCGA-ER-A1A1       TCGA-ER-A3ET 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1YW       TCGA-FS-A1YX       TCGA-FS-A1YY       TCGA-FS-A1Z0 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1Z3       TCGA-FS-A1Z4       TCGA-FS-A1Z7       TCGA-FS-A1ZA 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZB       TCGA-FS-A1ZD       TCGA-FS-A1ZE       TCGA-FS-A1ZF 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZG       TCGA-FS-A1ZH       TCGA-FS-A1ZJ       TCGA-FS-A1ZK 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE"   "TSGA13 MUTATED" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZM       TCGA-FS-A1ZP       TCGA-FS-A1ZR       TCGA-FS-A1ZS 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZT       TCGA-FS-A1ZU       TCGA-FS-A1ZW       TCGA-FS-A1ZY 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-FS-A1ZZ       TCGA-FW-A3I3       TCGA-GN-A261       TCGA-GN-A262 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-GN-A264       TCGA-GN-A265       TCGA-GN-A266       TCGA-GN-A267 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
      TCGA-GN-A268       TCGA-GN-A26A       TCGA-GN-A26D 
"TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" "TSGA13 WILD-TYPE" 
[1] "hr=" "2.7"
D123V2, continuous
D123V3, binary
                  cls
clus                0  1
  TSGA13 MUTATED    1  5
  TSGA13 WILD-TYPE 56 84
[1] "tbl2"
                  cls
clus               [,1] [,2]
  TSGA13 MUTATED      1    5
  TSGA13 WILD-TYPE   56   84
        clus
vv       TSGA13 MUTATED TSGA13 WILD-TYPE
  FEMALE              1               56
  MALE                5               84
                  vv
clus                M0  M1 M1A M1B M1C
  TSGA13 MUTATED     5   0   0   0   0
  TSGA13 WILD-TYPE 119   2   1   1   2
D123V4, multiclass
                  vv
clus               N0 N1 N1A N1B N2A N2B N2C N3 NX
  TSGA13 MUTATED    5  0   0   0   0   0   0  0  0
  TSGA13 WILD-TYPE 76  2   7  12   3   9   5 10  2
D123V5, multiclass
D123V6, continuous
                  vv
clus               STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  TSGA13 MUTATED         3        1        0        1         0         0
  TSGA13 WILD-TYPE      14        8       11       17         7         8
                  vv
clus               STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  TSGA13 MUTATED           0         0          0          0          0
  TSGA13 WILD-TYPE         7         5          6         16         16
                  vv
clus               STAGE IV
  TSGA13 MUTATED          0
  TSGA13 WILD-TYPE        4
D123V7, multiclass

Clustering(124) Variable = OPN5 MUTATION ANALYSIS
D124V1, survival
                sevent
clus2             0  1
  OPN5 MUTATED    4  1
  OPN5 WILD-TYPE 68 70
  OPN5 MUTATED OPN5 WILD-TYPE 
             5            138 
  OPN5 MUTATED OPN5 WILD-TYPE 
             1             70 
$`OPN5 MUTATED`
TCGA-DA-A1I7 TCGA-EE-A181 TCGA-EE-A29E TCGA-EE-A2GH TCGA-EE-A3AG 
       61.18        33.73        39.62       182.01        23.47 

$`OPN5 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         2.70         6.38        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 
       20.38       194.83       176.55        35.93       107.34        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82         8.65        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       78.94        24.43        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      314.53       135.91        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       43.23       103.56       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH 
      122.73        25.84         3.68        26.73        13.81       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       27.06        27.02         0.20        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        62.76        32.48        39.58 

  OPN5 MUTATED OPN5 WILD-TYPE 
         23.47           0.20 
  OPN5 MUTATED OPN5 WILD-TYPE 
        182.01         345.96 
  OPN5 MUTATED OPN5 WILD-TYPE 
         39.62          47.69 
[1] "23.5 - 182.0 (39.6)" "0.2 - 346.0 (47.7)" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"OPN5 WILD-TYPE"   "OPN5 MUTATED" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "OPN5 MUTATED" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE"   "OPN5 MUTATED" "OPN5 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE"   "OPN5 MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE"   "OPN5 MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"OPN5 WILD-TYPE"   "OPN5 MUTATED" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "OPN5 MUTATED" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE"   "OPN5 MUTATED" "OPN5 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE"   "OPN5 MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE"   "OPN5 MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-D3-A1Q7     TCGA-D3-A3C6     TCGA-D3-A3CC     TCGA-D3-A3MO 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-D3-A3MV     TCGA-D9-A148     TCGA-D9-A149     TCGA-D9-A1JW 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-D9-A1JX     TCGA-DA-A1HV     TCGA-DA-A1HW     TCGA-DA-A1HY 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A1I0     TCGA-DA-A1I1     TCGA-DA-A1I2     TCGA-DA-A1I4 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A1I5     TCGA-DA-A1I7     TCGA-DA-A1I8     TCGA-DA-A1IA 
"OPN5 WILD-TYPE"   "OPN5 MUTATED" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A1IB     TCGA-DA-A1IC     TCGA-DA-A3F2     TCGA-DA-A3F3 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-DA-A3F5     TCGA-DA-A3F8     TCGA-EE-A17X     TCGA-EE-A17Z 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A181     TCGA-EE-A182     TCGA-EE-A183     TCGA-EE-A185 
  "OPN5 MUTATED" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A20B     TCGA-EE-A20F     TCGA-EE-A20H     TCGA-EE-A29A 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A29C     TCGA-EE-A29D     TCGA-EE-A29E     TCGA-EE-A29H 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE"   "OPN5 MUTATED" "OPN5 WILD-TYPE" 
    TCGA-EE-A29L     TCGA-EE-A29M     TCGA-EE-A29N     TCGA-EE-A29P 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A29Q     TCGA-EE-A29R     TCGA-EE-A29S     TCGA-EE-A29T 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A29V     TCGA-EE-A29X     TCGA-EE-A2A0     TCGA-EE-A2A1 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2A2     TCGA-EE-A2A5     TCGA-EE-A2A6     TCGA-EE-A2GB 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2GC     TCGA-EE-A2GD     TCGA-EE-A2GE     TCGA-EE-A2GH 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE"   "OPN5 MUTATED" 
    TCGA-EE-A2GI     TCGA-EE-A2GJ     TCGA-EE-A2GK     TCGA-EE-A2GL 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2GM     TCGA-EE-A2GN     TCGA-EE-A2GO     TCGA-EE-A2GP 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2GR     TCGA-EE-A2GS     TCGA-EE-A2GT     TCGA-EE-A2GU 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2M5     TCGA-EE-A2M6     TCGA-EE-A2M7     TCGA-EE-A2M8 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MC     TCGA-EE-A2MD     TCGA-EE-A2ME     TCGA-EE-A2MG 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MH     TCGA-EE-A2MI     TCGA-EE-A2MJ     TCGA-EE-A2MK 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2ML     TCGA-EE-A2MM     TCGA-EE-A2MN     TCGA-EE-A2MP 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MQ     TCGA-EE-A2MR     TCGA-EE-A2MS     TCGA-EE-A2MT 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A2MU     TCGA-EE-A3AA     TCGA-EE-A3AB     TCGA-EE-A3AC 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-EE-A3AD     TCGA-EE-A3AE     TCGA-EE-A3AF     TCGA-EE-A3AG 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE"   "OPN5 MUTATED" 
    TCGA-EE-A3AH     TCGA-ER-A19D     TCGA-ER-A19F     TCGA-ER-A19J 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-ER-A19L     TCGA-ER-A19N     TCGA-ER-A1A1     TCGA-ER-A3ET 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1YW     TCGA-FS-A1YX     TCGA-FS-A1YY     TCGA-FS-A1Z0 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1Z3     TCGA-FS-A1Z4     TCGA-FS-A1Z7     TCGA-FS-A1ZA 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZB     TCGA-FS-A1ZD     TCGA-FS-A1ZE     TCGA-FS-A1ZF 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZG     TCGA-FS-A1ZH     TCGA-FS-A1ZJ     TCGA-FS-A1ZK 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZM     TCGA-FS-A1ZP     TCGA-FS-A1ZR     TCGA-FS-A1ZS 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZT     TCGA-FS-A1ZU     TCGA-FS-A1ZW     TCGA-FS-A1ZY 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-FS-A1ZZ     TCGA-FW-A3I3     TCGA-GN-A261     TCGA-GN-A262 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-GN-A264     TCGA-GN-A265     TCGA-GN-A266     TCGA-GN-A267 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
    TCGA-GN-A268     TCGA-GN-A26A     TCGA-GN-A26D 
"OPN5 WILD-TYPE" "OPN5 WILD-TYPE" "OPN5 WILD-TYPE" 
[1] "hr=" "2.6"
D124V2, continuous
D124V3, binary
                cls
clus              0  1
  OPN5 MUTATED    1  4
  OPN5 WILD-TYPE 56 85
[1] "tbl2"
                cls
clus             [,1] [,2]
  OPN5 MUTATED      1    4
  OPN5 WILD-TYPE   56   85
        clus
vv       OPN5 MUTATED OPN5 WILD-TYPE
  FEMALE            1             56
  MALE              4             85
                vv
clus              M0  M1 M1A M1B M1C
  OPN5 MUTATED     4   0   0   0   0
  OPN5 WILD-TYPE 120   2   1   1   2
D124V4, multiclass
                vv
clus             N0 N1 N1A N1B N2A N2B N2C N3 NX
  OPN5 MUTATED    2  0   0   1   0   1   0  0  0
  OPN5 WILD-TYPE 79  2   7  11   3   8   5 10  2
D124V5, multiclass
D124V6, continuous
                vv
clus             STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  OPN5 MUTATED         1        0        0        1         0         0
  OPN5 WILD-TYPE      16        9       11       17         7         8
                vv
clus             STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  OPN5 MUTATED           0         0          0          2          0        0
  OPN5 WILD-TYPE         7         5          6         14         16        4
D124V7, multiclass

Clustering(125) Variable = SPINK13 MUTATION ANALYSIS
D125V1, survival
                   sevent
clus2                0  1
  SPINK13 MUTATED    1  3
  SPINK13 WILD-TYPE 71 68
  SPINK13 MUTATED SPINK13 WILD-TYPE 
                4               139 
  SPINK13 MUTATED SPINK13 WILD-TYPE 
                3                68 
$`SPINK13 MUTATED`
TCGA-D9-A149 TCGA-EE-A29D TCGA-EE-A2M5 TCGA-EE-A2MJ 
       49.74        13.97        21.67        96.23 

$`SPINK13 WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
      121.22        58.03        71.24         9.30        21.47       148.31 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       43.23       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
      204.62       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       43.23       103.56       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N 
      138.77        12.59        26.37         6.41       131.08        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.32       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD 
       20.91        28.08         7.76        27.68        48.85        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
      101.26        74.73        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A262 
       49.48        27.06        27.02         0.20        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  SPINK13 MUTATED SPINK13 WILD-TYPE 
            13.97              0.20 
  SPINK13 MUTATED SPINK13 WILD-TYPE 
            96.23            345.96 
  SPINK13 MUTATED SPINK13 WILD-TYPE 
           35.705            47.540 
[1] "14.0 - 96.2 (35.7)" "0.2 - 346.0 (47.5)"
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE"   "SPINK13 MUTATED" "SPINK13 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"SPINK13 WILD-TYPE"   "SPINK13 MUTATED" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "SPINK13 MUTATED" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE"   "SPINK13 MUTATED" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE"   "SPINK13 MUTATED" "SPINK13 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"SPINK13 WILD-TYPE"   "SPINK13 MUTATED" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "SPINK13 MUTATED" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE"   "SPINK13 MUTATED" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-D3-A1Q7        TCGA-D3-A3C6        TCGA-D3-A3CC        TCGA-D3-A3MO 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-D3-A3MV        TCGA-D9-A148        TCGA-D9-A149        TCGA-D9-A1JW 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE"   "SPINK13 MUTATED" "SPINK13 WILD-TYPE" 
       TCGA-D9-A1JX        TCGA-DA-A1HV        TCGA-DA-A1HW        TCGA-DA-A1HY 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A1I0        TCGA-DA-A1I1        TCGA-DA-A1I2        TCGA-DA-A1I4 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A1I5        TCGA-DA-A1I7        TCGA-DA-A1I8        TCGA-DA-A1IA 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A1IB        TCGA-DA-A1IC        TCGA-DA-A3F2        TCGA-DA-A3F3 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-DA-A3F5        TCGA-DA-A3F8        TCGA-EE-A17X        TCGA-EE-A17Z 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A181        TCGA-EE-A182        TCGA-EE-A183        TCGA-EE-A185 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A20B        TCGA-EE-A20F        TCGA-EE-A20H        TCGA-EE-A29A 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29C        TCGA-EE-A29D        TCGA-EE-A29E        TCGA-EE-A29H 
"SPINK13 WILD-TYPE"   "SPINK13 MUTATED" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29L        TCGA-EE-A29M        TCGA-EE-A29N        TCGA-EE-A29P 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29Q        TCGA-EE-A29R        TCGA-EE-A29S        TCGA-EE-A29T 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A29V        TCGA-EE-A29X        TCGA-EE-A2A0        TCGA-EE-A2A1 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2A2        TCGA-EE-A2A5        TCGA-EE-A2A6        TCGA-EE-A2GB 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GC        TCGA-EE-A2GD        TCGA-EE-A2GE        TCGA-EE-A2GH 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GI        TCGA-EE-A2GJ        TCGA-EE-A2GK        TCGA-EE-A2GL 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GM        TCGA-EE-A2GN        TCGA-EE-A2GO        TCGA-EE-A2GP 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2GR        TCGA-EE-A2GS        TCGA-EE-A2GT        TCGA-EE-A2GU 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2M5        TCGA-EE-A2M6        TCGA-EE-A2M7        TCGA-EE-A2M8 
  "SPINK13 MUTATED" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MC        TCGA-EE-A2MD        TCGA-EE-A2ME        TCGA-EE-A2MG 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MH        TCGA-EE-A2MI        TCGA-EE-A2MJ        TCGA-EE-A2MK 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE"   "SPINK13 MUTATED" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2ML        TCGA-EE-A2MM        TCGA-EE-A2MN        TCGA-EE-A2MP 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MQ        TCGA-EE-A2MR        TCGA-EE-A2MS        TCGA-EE-A2MT 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A2MU        TCGA-EE-A3AA        TCGA-EE-A3AB        TCGA-EE-A3AC 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A3AD        TCGA-EE-A3AE        TCGA-EE-A3AF        TCGA-EE-A3AG 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-EE-A3AH        TCGA-ER-A19D        TCGA-ER-A19F        TCGA-ER-A19J 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-ER-A19L        TCGA-ER-A19N        TCGA-ER-A1A1        TCGA-ER-A3ET 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1YW        TCGA-FS-A1YX        TCGA-FS-A1YY        TCGA-FS-A1Z0 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1Z3        TCGA-FS-A1Z4        TCGA-FS-A1Z7        TCGA-FS-A1ZA 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZB        TCGA-FS-A1ZD        TCGA-FS-A1ZE        TCGA-FS-A1ZF 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZG        TCGA-FS-A1ZH        TCGA-FS-A1ZJ        TCGA-FS-A1ZK 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZM        TCGA-FS-A1ZP        TCGA-FS-A1ZR        TCGA-FS-A1ZS 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZT        TCGA-FS-A1ZU        TCGA-FS-A1ZW        TCGA-FS-A1ZY 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-FS-A1ZZ        TCGA-FW-A3I3        TCGA-GN-A261        TCGA-GN-A262 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-GN-A264        TCGA-GN-A265        TCGA-GN-A266        TCGA-GN-A267 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
       TCGA-GN-A268        TCGA-GN-A26A        TCGA-GN-A26D 
"SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" "SPINK13 WILD-TYPE" 
[1] "hr=" "2.1"
D125V2, continuous
D125V3, binary
                   cls
clus                 0  1
  SPINK13 MUTATED    1  3
  SPINK13 WILD-TYPE 56 86
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SPINK13 MUTATED      1    3
  SPINK13 WILD-TYPE   56   86
        clus
vv       SPINK13 MUTATED SPINK13 WILD-TYPE
  FEMALE               1                56
  MALE                 3                86
                   vv
clus                 M0  M1 M1A M1B M1C
  SPINK13 MUTATED     4   0   0   0   0
  SPINK13 WILD-TYPE 120   2   1   1   2
D125V4, multiclass
                   vv
clus                N0 N1 N1A N1B N2A N2B N2C N3 NX
  SPINK13 MUTATED    2  0   0   2   0   0   0  0  0
  SPINK13 WILD-TYPE 79  2   7  10   3   9   5 10  2
D125V5, multiclass
D125V6, continuous
                   vv
clus                STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB
  SPINK13 MUTATED         1        0        0        1         0         0
  SPINK13 WILD-TYPE      16        9       11       17         7         8
                   vv
clus                STAGE IIC STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  SPINK13 MUTATED           0         0          0          0          1
  SPINK13 WILD-TYPE         7         5          6         16         15
                   vv
clus                STAGE IV
  SPINK13 MUTATED          0
  SPINK13 WILD-TYPE        4
D125V7, multiclass
                   V1.D                      V2                      V3 
        "Time to Death"                   "AGE"                "GENDER" 
                     V4                      V5                      V6 
   "DISTANT.METASTASIS" "LYMPH.NODE.METASTASIS"       "TUMOR.STAGECODE" 
                     V7 
"NEOPLASM.DISEASESTAGE" 
> q(save="no")
