		Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		NUMBERPACKYEARSSMOKED		TOBACCOSMOKINGHISTORYINDICATOR		DISTANT.METASTASIS		LYMPH.NODE.METASTASIS		NUMBER.OF.LYMPH.NODES		TUMOR.STAGECODE		NEOPLASM.DISEASESTAGE	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	14 (11%)	117	0.084448	1	0.48985	1	0.3409	1	0.49411	1	0.38477	1	0.90772	1	0.5262	1	0.012872	1	0.65978	1	NA	NA	0.44729	1
1q gain	28 (21%)	103	0.03034	1	0.020896	1	0.63091	1	0.25706	1	0.70368	1	0.48661	1	0.35492	1	0.26592	1	0.96238	1	NA	NA	0.45045	1
2p gain	23 (18%)	108	0.46808	1	0.8532	1	0.00038389	0.273	0.25706	1	0.77788	1	0.62578	1	0.54406	1	0.48578	1	0.50057	1	NA	NA	0.54278	1
2q gain	10 (8%)	121	0.61972	1	0.63245	1	0.71191	1	0.25706	1	0.44288	1	0.45527	1	0.61364	1	0.26244	1	0.31613	1	NA	NA	0.14132	1
3p gain	28 (21%)	103	0.54637	1	0.28493	1	0.33727	1	0.86873	1	0.92347	1	0.94239	1	0.72773	1	0.04064	1	0.22843	1	NA	NA	0.063192	1
3q gain	37 (28%)	94	0.19183	1	0.40522	1	0.11945	1	0.66547	1	0.6726	1	0.81483	1	0.48007	1	0.050435	1	0.22265	1	NA	NA	0.12944	1
4p gain	8 (6%)	123	0.089192	1	0.81918	1	0.6787	1	NA	NA	0.39432	1	0.56916	1	0.27362	1	0.40782	1	0.00020105	0.143	NA	NA	0.26585	1
4q gain	3 (2%)	128	0.30299	1	0.51542	1	1	1	NA	NA	0.28444	1	0.8602	1	1	1	0.6914	1	NA	NA	NA	NA	0.40242	1
5p gain	38 (29%)	93	0.75492	1	0.36914	1	0.65776	1	0.092415	1	0.41733	1	0.32975	1	0.93375	1	0.0025213	1	0.05376	1	NA	NA	0.37459	1
5q gain	18 (14%)	113	0.29653	1	0.54294	1	0.55981	1	0.35951	1	0.98243	1	0.8655	1	1	1	0.094421	1	7.1846e-05	0.0513	NA	NA	0.034895	1
6p gain	7 (5%)	124	0.23677	1	0.37859	1	1	1	0.45018	1	0.98907	1	0.37783	1	1	1	0.5498	1	0.0080067	1	NA	NA	0.80241	1
6q gain	4 (3%)	127	0.24864	1	0.59106	1	0.57162	1	NA	NA	0.77778	1	0.066309	1	0.68851	1	0.13099	1	0.0075969	1	NA	NA	0.56603	1
7p gain	39 (30%)	92	0.49655	1	0.36573	1	0.66176	1	0.14099	1	0.36096	1	0.09675	1	0.63322	1	0.20758	1	0.7365	1	NA	NA	0.2716	1
7q gain	37 (28%)	94	0.62903	1	0.51799	1	0.04535	1	0.21152	1	0.1464	1	0.40693	1	0.54735	1	0.091573	1	0.87948	1	NA	NA	0.32553	1
8p gain	14 (11%)	117	0.9018	1	0.18519	1	1	1	0.82097	1	0.21444	1	0.1246	1	0.86102	1	0.61525	1	0.0015997	1	NA	NA	0.55509	1
8q gain	35 (27%)	96	0.93276	1	0.46501	1	1	1	0.31451	1	0.2306	1	0.85459	1	0.70551	1	0.83326	1	0.015967	1	NA	NA	0.19543	1
9p gain	13 (10%)	118	0.037044	1	0.024182	1	0.18283	1	0.84195	1	0.026537	1	0.081924	1	0.43147	1	0.6328	1	0.0016095	1	NA	NA	0.09954	1
9q gain	11 (8%)	120	0.082544	1	0.25561	1	0.46748	1	0.786	1	0.03278	1	0.82802	1	0.25677	1	0.16848	1	2.8677e-06	0.00206	NA	NA	0.00099538	0.706
10p gain	26 (20%)	105	0.84217	1	0.81676	1	1	1	0.59264	1	0.71512	1	0.7637	1	0.64981	1	0.27782	1	0.66608	1	NA	NA	0.081452	1
10q gain	7 (5%)	124	0.40188	1	0.113	1	1	1	NA	NA	0.68941	1	0.8611	1	0.39234	1	0.2096	1	0.535	1	NA	NA	0.27523	1
11p gain	6 (5%)	125	0.055115	1	0.10942	1	0.33623	1	0.087451	1	0.61777	1	0.20376	1	0.74013	1	0.27502	1	0.10013	1	NA	NA	0.53078	1
11q gain	6 (5%)	125	0.17696	1	0.49836	1	0.33623	1	0.62376	1	0.63096	1	0.57732	1	1	1	0.38285	1	0.33651	1	NA	NA	0.68689	1
12p gain	22 (17%)	109	0.93884	1	0.84398	1	1	1	0.46507	1	0.94352	1	0.45031	1	0.90804	1	0.95698	1	0.020518	1	NA	NA	0.1687	1
12q gain	17 (13%)	114	0.36039	1	0.46387	1	0.23664	1	0.34655	1	0.53164	1	0.84717	1	0.37154	1	0.84484	1	0.081578	1	NA	NA	0.051522	1
13q gain	21 (16%)	110	0.38294	1	0.59743	1	1	1	0.63992	1	0.14535	1	0.93465	1	0.15616	1	0.41748	1	0.87078	1	NA	NA	0.60244	1
14q gain	11 (8%)	120	0.95518	1	0.6326	1	0.46748	1	0.47127	1	0.3407	1	0.34805	1	0.43872	1	0.42163	1	7.0995e-05	0.0508	NA	NA	0.46833	1
15q gain	4 (3%)	127	0.08363	1	0.82812	1	1	1	NA	NA	NA	NA	0.5096	1	0.24783	1	0.60252	1	0.92204	1	NA	NA	1	1
16p gain	10 (8%)	121	4.1012e-05	0.0294	0.45523	1	0.27015	1	0.6163	1	0.2123	1	0.43125	1	0.078749	1	0.81866	1	0.068027	1	NA	NA	0.85594	1
16q gain	12 (9%)	119	0.0015657	1	0.31922	1	0.073277	1	0.46787	1	0.43934	1	0.4015	1	0.36946	1	0.68386	1	0.052496	1	NA	NA	0.72404	1
17p gain	8 (6%)	123	0.41535	1	0.96425	1	0.41478	1	NA	NA	0.68307	1	0.95233	1	0.33596	1	0.25993	1	3.0394e-06	0.00218	NA	NA	0.030598	1
17q gain	23 (18%)	108	0.64029	1	0.91651	1	1	1	0.042073	1	0.27993	1	0.064003	1	0.20372	1	0.065197	1	0.93601	1	NA	NA	0.10153	1
18p gain	23 (18%)	108	0.59767	1	0.65374	1	0.59794	1	0.46864	1	0.37498	1	0.072222	1	0.33512	1	0.45588	1	0.6663	1	NA	NA	0.54278	1
18q gain	7 (5%)	124	0.026015	1	0.78803	1	1	1	NA	NA	0.8476	1	0.20376	1	0.17474	1	0.88867	1	0.26851	1	NA	NA	0.80241	1
19p gain	13 (10%)	118	0.93961	1	0.87649	1	1	1	0.13586	1	0.66155	1	0.50719	1	1	1	0.75196	1	0.063441	1	NA	NA	0.55509	1
19q gain	26 (20%)	105	0.24792	1	0.9509	1	0.21837	1	0.22564	1	0.57489	1	0.35926	1	0.85011	1	0.83943	1	0.73949	1	NA	NA	0.85774	1
20p gain	48 (37%)	83	0.32399	1	0.8441	1	0.14305	1	0.7528	1	0.43524	1	0.57802	1	0.19125	1	0.8029	1	0.41888	1	NA	NA	0.59139	1
20q gain	52 (40%)	79	0.73397	1	0.39971	1	1	1	0.63165	1	0.27948	1	0.081469	1	1	1	0.92275	1	0.40194	1	NA	NA	0.43329	1
21q gain	24 (18%)	107	0.4373	1	0.21642	1	1	1	0.90661	1	0.6391	1	0.75619	1	0.69033	1	0.1521	1	0.92899	1	NA	NA	0.020465	1
22q gain	11 (8%)	120	0.076064	1	0.54351	1	0.72937	1	0.60554	1	0.48697	1	0.0070852	1	0.82933	1	0.25636	1	0.54032	1	NA	NA	0.7328	1
Xq gain	6 (5%)	125	0.35055	1	0.82906	1	0.64141	1	NA	NA	0.50267	1	0.84452	1	0.068578	1	0.12033	1	0.72273	1	NA	NA	0.53078	1
2p loss	7 (5%)	124	0.58779	1	0.65439	1	0.6787	1	0.90435	1	0.23782	1	0.53544	1	0.76039	1	0.30727	1	NA	NA	NA	NA	0.32828	1
2q loss	15 (11%)	116	0.022752	1	0.65177	1	0.75986	1	0.49186	1	0.25051	1	0.88961	1	1	1	0.17876	1	0.2525	1	NA	NA	0.5781	1
3p loss	9 (7%)	122	0.94252	1	0.64512	1	0.22842	1	NA	NA	0.49385	1	0.048034	1	0.8041	1	0.5569	1	0.86167	1	NA	NA	0.91877	1
4p loss	25 (19%)	106	0.50324	1	0.92209	1	1	1	0.09483	1	0.54086	1	0.87067	1	0.18305	1	0.033808	1	0.26122	1	NA	NA	0.35806	1
4q loss	23 (18%)	108	0.70974	1	0.82539	1	0.79531	1	0.09483	1	0.95112	1	0.92503	1	0.20372	1	0.83943	1	0.72138	1	NA	NA	0.42215	1
5p loss	12 (9%)	119	0.37978	1	0.32515	1	0.17677	1	0.099796	1	0.97611	1	0.15158	1	0.82933	1	0.96988	1	0.78735	1	NA	NA	0.15083	1
5q loss	32 (24%)	99	0.99839	1	0.33477	1	0.81514	1	0.66599	1	0.26183	1	0.17995	1	0.13453	1	0.38139	1	0.37819	1	NA	NA	0.28646	1
6p loss	16 (12%)	115	0.92732	1	0.56451	1	0.54805	1	6.6253e-05	0.0474	0.66086	1	0.55981	1	0.49993	1	0.072947	1	0.34929	1	NA	NA	0.054913	1
6q loss	27 (21%)	104	0.42754	1	0.87412	1	0.62016	1	0.24229	1	0.35206	1	0.028979	1	0.11709	1	0.12936	1	0.23497	1	NA	NA	0.025334	1
8p loss	47 (36%)	84	0.23345	1	0.57491	1	0.29577	1	0.29011	1	0.16206	1	1	1	0.018323	1	0.34728	1	0.55172	1	NA	NA	0.27174	1
8q loss	5 (4%)	126	0.53097	1	0.086151	1	0.59945	1	NA	NA	0.88307	1	0.69707	1	0.10557	1	0.76728	1	0.26042	1	NA	NA	0.47265	1
9p loss	38 (29%)	93	0.95463	1	0.51654	1	0.27824	1	0.74332	1	0.28366	1	0.16708	1	0.18165	1	0.72153	1	0.89191	1	NA	NA	0.66325	1
9q loss	36 (27%)	95	0.81218	1	0.87559	1	0.18508	1	0.65069	1	0.19832	1	0.4441	1	0.53988	1	0.60556	1	0.06708	1	NA	NA	0.61401	1
10p loss	18 (14%)	113	0.48075	1	0.8965	1	1	1	0.018574	1	0.80428	1	0.033331	1	0.26449	1	0.80948	1	0.040943	1	NA	NA	0.83925	1
10q loss	26 (20%)	105	0.42711	1	0.023102	1	0.80491	1	0.13385	1	0.74374	1	0.23766	1	0.92443	1	0.71925	1	0.84878	1	NA	NA	0.69996	1
11p loss	43 (33%)	88	0.61748	1	0.21842	1	0.67035	1	0.035918	1	0.98217	1	0.74665	1	0.043672	1	0.77051	1	0.24112	1	NA	NA	0.036315	1
11q loss	32 (24%)	99	0.7147	1	0.52999	1	0.81514	1	0.7079	1	0.32454	1	0.48649	1	0.26147	1	0.26777	1	0.20252	1	NA	NA	0.53709	1
12p loss	5 (4%)	126	0.93656	1	0.29779	1	0.3296	1	NA	NA	0.67758	1	0.17296	1	1	1	0.76728	1	0.87656	1	NA	NA	0.86223	1
12q loss	8 (6%)	123	0.10176	1	0.74966	1	0.6787	1	0.52764	1	0.92288	1	0.947	1	1	1	0.19868	1	0.51475	1	NA	NA	0.90603	1
13q loss	18 (14%)	113	0.87442	1	0.68452	1	0.24001	1	0.015904	1	0.72336	1	0.06492	1	0.78596	1	0.81274	1	0.58198	1	NA	NA	0.55916	1
14q loss	22 (17%)	109	0.20983	1	0.24147	1	0.28023	1	0.77236	1	0.71941	1	0.82719	1	0.74148	1	0.54627	1	0.67615	1	NA	NA	0.14932	1
15q loss	15 (11%)	116	0.47244	1	0.82424	1	0.52773	1	0.76343	1	0.88305	1	0.19371	1	0.12039	1	0.95574	1	0.94606	1	NA	NA	0.67241	1
16p loss	14 (11%)	117	0.45859	1	0.20516	1	0.18832	1	0.0945	1	0.44345	1	0.0040408	1	0.86102	1	0.55438	1	0.9758	1	NA	NA	0.83226	1
16q loss	15 (11%)	116	0.71832	1	0.30959	1	0.35363	1	0.19118	1	0.94614	1	7.368e-05	0.0525	0.86621	1	0.052558	1	0.34367	1	NA	NA	0.5781	1
17p loss	36 (27%)	95	0.34743	1	0.71244	1	0.65936	1	0.85582	1	0.35779	1	0.66317	1	0.37544	1	0.5564	1	0.70577	1	NA	NA	0.72981	1
17q loss	5 (4%)	126	0.88676	1	0.40675	1	1	1	0.76998	1	0.52583	1	1	1	1	1	0.028072	1	NA	NA	NA	NA	0.46038	1
18p loss	19 (15%)	112	0.16184	1	0.050561	1	0.56848	1	0.29542	1	0.67386	1	0.96612	1	0.71264	1	0.71846	1	0.85531	1	NA	NA	0.49489	1
18q loss	36 (27%)	95	0.037503	1	0.023217	1	0.25901	1	0.5701	1	0.37911	1	0.41226	1	0.80637	1	0.91965	1	0.89651	1	NA	NA	0.33644	1
19p loss	8 (6%)	123	0.34132	1	0.91276	1	1	1	NA	NA	0.92934	1	0.30733	1	0.0053078	1	0.023715	1	0.26487	1	NA	NA	0.023714	1
19q loss	3 (2%)	128	0.00088914	0.631	0.90038	1	0.57162	1	NA	NA	NA	NA	0.39878	1	0.60441	1	0.67721	1	0.69206	1	NA	NA	0.78124	1
20p loss	5 (4%)	126	0.83434	1	0.22277	1	1	1	NA	NA	0.0059565	1	0.40219	1	1	1	0.88482	1	0.72384	1	NA	NA	1	1
21q loss	14 (11%)	117	0.996	1	0.020363	1	0.75026	1	0.38342	1	0.89387	1	0.96137	1	0.32964	1	0.17357	1	0.69687	1	NA	NA	0.4647	1
22q loss	25 (19%)	106	0.11487	1	0.51791	1	0.79864	1	0.18684	1	0.80765	1	0.10895	1	0.11891	1	0.3109	1	0.62666	1	NA	NA	0.58313	1
Xq loss	4 (3%)	127	0.31013	1	0.71433	1	1	1	NA	NA	0.34856	1	0.60207	1	1	1	0.0047123	1	NA	NA	NA	NA	0.030517	1
