name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-A4-7286-01A-11D-2136-08	48	43	5	32	1.041667e-01	1	exome+100bp flanks	34834024	11	32	3.157832e-07	9.186421e-07
TCGA-A4-7287-01A-11D-2136-08	48	47	1	37	2.083333e-02	1	exome+100bp flanks	34834024	10	37	2.870756e-07	1.062180e-06
TCGA-A4-7288-01A-11D-2136-08	79	78	1	62	1.265823e-02	0	coding only	34834024	16	62	4.593210e-07	1.779869e-06
TCGA-A4-7583-01A-11D-2136-08	70	67	3	55	4.285714e-02	1	exome+100bp flanks	34834024	12	54	3.444908e-07	1.550208e-06
TCGA-A4-7584-01A-11D-2136-08	85	82	3	65	3.529412e-02	1	exome+100bp flanks	34834024	17	63	4.880286e-07	1.808577e-06
TCGA-A4-7585-01A-11D-2136-08	98	96	2	81	2.040816e-02	0	coding only	34834024	14	80	4.019059e-07	2.296605e-06
TCGA-A4-7732-01A-11D-2136-08	73	71	2	62	2.739726e-02	0	coding only	34834024	9	59	2.583681e-07	1.693746e-06
TCGA-A4-7734-01A-11D-2136-08	61	59	2	49	3.278689e-02	1	exome+100bp flanks	34834024	10	49	2.870756e-07	1.406671e-06
TCGA-A4-7828-01A-11D-2136-08	42	40	2	33	4.761905e-02	1	exome+100bp flanks	34834024	7	33	2.009530e-07	9.473496e-07
TCGA-A4-7915-01A-11D-2201-08	35	34	1	28	2.857143e-02	1	exome+100bp flanks	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-A4-7996-01A-11D-2201-08	97	96	1	73	1.030928e-02	0	coding only	34834024	23	73	6.602740e-07	2.095652e-06
TCGA-A4-7997-01A-11D-2201-08	83	81	2	60	2.409639e-02	0	coding only	34834024	21	60	6.028589e-07	1.722454e-06
TCGA-AL-3466-01A-01D-1252-08	63	60	3	47	4.761905e-02	1	exome+100bp flanks	34834024	13	45	3.731983e-07	1.291840e-06
TCGA-AL-3467-01A-01D-1252-08	33	33	0	26	0	1	exome+100bp flanks	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-AL-3468-01A-01D-1252-08	126	118	8	91	6.349206e-02	1	exome+100bp flanks	34834024	26	89	7.463967e-07	2.554973e-06
TCGA-AL-3472-01A-01D-1252-08	66	65	1	53	1.515152e-02	0	coding only	34834024	12	50	3.444908e-07	1.435378e-06
TCGA-AL-3473-01A-01D-1252-08	84	78	6	66	7.142857e-02	1	exome+100bp flanks	34834024	12	64	3.444908e-07	1.837284e-06
TCGA-AL-7173-01A-11D-2136-08	69	68	1	56	1.449275e-02	0	coding only	34834024	12	54	3.444908e-07	1.550208e-06
TCGA-B1-5398-01A-02D-1589-08	130	128	2	92	1.538462e-02	0	coding only	34834024	35	92	1.004765e-06	2.641096e-06
TCGA-B3-3925-01A-01D-1252-08	100	96	4	72	4.000000e-02	1	exome+100bp flanks	34834024	24	70	6.889816e-07	2.009530e-06
TCGA-B3-3925-01A-01D-1458-08	92	86	6	63	6.521739e-02	1	exome+100bp flanks	34834024	21	61	6.028589e-07	1.751161e-06
TCGA-B3-3926-01A-01D-1252-08	29	28	1	23	3.448276e-02	1	exome+100bp flanks	34834024	4	23	1.148303e-07	6.602740e-07
TCGA-B3-4103-01A-01D-1252-08	91	87	4	69	4.395604e-02	1	exome+100bp flanks	34834024	17	69	4.880286e-07	1.980822e-06
TCGA-B3-4103-01A-01D-1458-08	87	82	5	64	5.747126e-02	1	exome+100bp flanks	34834024	18	64	5.167362e-07	1.837284e-06
TCGA-B3-4104-01A-01D-1252-08	133	126	7	96	5.263158e-02	1	exome+100bp flanks	34834024	30	96	8.612269e-07	2.755926e-06
TCGA-B3-4104-01A-01D-1458-08	135	129	6	98	4.444444e-02	1	exome+100bp flanks	34834024	31	97	8.899345e-07	2.784634e-06
TCGA-B9-4113-01A-01D-1252-08	88	87	1	67	1.136364e-02	0	coding only	34834024	19	66	5.454437e-07	1.894699e-06
TCGA-B9-4114-01A-01D-1252-08	100	98	2	78	2.000000e-02	0	coding only	34834024	20	78	5.741513e-07	2.239190e-06
TCGA-B9-4115-01A-01D-1252-08	79	78	1	53	1.265823e-02	0	coding only	34834024	25	51	7.176891e-07	1.464086e-06
TCGA-B9-4116-01A-01D-1252-08	109	107	2	84	1.834862e-02	0	coding only	34834024	22	82	6.315664e-07	2.354020e-06
TCGA-B9-4117-01A-01D-1252-08	69	66	3	54	4.347826e-02	1	exome+100bp flanks	34834024	12	52	3.444908e-07	1.492793e-06
TCGA-B9-4617-01A-01D-1252-08	78	73	5	59	6.410256e-02	1	exome+100bp flanks	34834024	13	58	3.731983e-07	1.665039e-06
TCGA-B9-5155-01A-01D-1589-08	137	134	3	104	2.189781e-02	0	coding only	34834024	30	104	8.612269e-07	2.985587e-06
TCGA-B9-5156-01A-01D-1589-08	101	100	1	79	9.900990e-03	0	coding only	34834024	20	78	5.741513e-07	2.239190e-06
TCGA-B9-7268-01A-11D-2136-08	61	58	3	40	4.918033e-02	1	exome+100bp flanks	34834024	18	38	5.167362e-07	1.090887e-06
TCGA-BQ-5875-01A-11D-1589-08	88	83	5	65	5.681818e-02	1	exome+100bp flanks	34834024	18	64	5.167362e-07	1.837284e-06
TCGA-BQ-5876-01A-11D-1589-08	96	93	3	76	3.125000e-02	1	exome+100bp flanks	34834024	17	75	4.880286e-07	2.153067e-06
TCGA-BQ-5877-01A-11D-1589-08	90	86	4	73	4.444444e-02	1	exome+100bp flanks	34834024	13	73	3.731983e-07	2.095652e-06
TCGA-BQ-5878-01A-11D-1589-08	131	128	3	90	2.290076e-02	0	coding only	34834024	37	87	1.062180e-06	2.497558e-06
TCGA-BQ-5879-01A-11D-1589-08	33	32	1	23	3.030303e-02	1	exome+100bp flanks	34834024	8	23	2.296605e-07	6.602740e-07
TCGA-BQ-5880-01A-11D-1589-08	70	68	2	55	2.857143e-02	0	coding only	34834024	13	52	3.731983e-07	1.492793e-06
TCGA-BQ-5881-01A-11D-1589-08	49	46	3	38	6.122449e-02	1	exome+100bp flanks	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-BQ-5882-01A-11D-1589-08	81	80	1	61	1.234568e-02	0	coding only	34834024	19	60	5.454437e-07	1.722454e-06
TCGA-BQ-5883-01A-11D-1589-08	50	43	7	35	1.400000e-01	1	exome+100bp flanks	34834024	7	33	2.009530e-07	9.473496e-07
TCGA-BQ-5884-01A-11D-1589-08	65	64	1	51	1.538462e-02	0	coding only	34834024	12	49	3.444908e-07	1.406671e-06
TCGA-BQ-5885-01A-11D-1589-08	125	124	1	100	8.000000e-03	0	coding only	34834024	24	99	6.889816e-07	2.842049e-06
TCGA-BQ-5886-01A-11D-1589-08	72	71	1	59	1.388889e-02	0	coding only	34834024	12	59	3.444908e-07	1.693746e-06
TCGA-BQ-5887-01A-11D-1961-08	29	28	1	22	3.448276e-02	1	exome+100bp flanks	34834024	6	18	1.722454e-07	5.167362e-07
TCGA-BQ-5888-01A-11D-1589-08	30	26	4	18	1.333333e-01	1	exome+100bp flanks	34834024	7	18	2.009530e-07	5.167362e-07
TCGA-BQ-5889-01A-11D-1589-08	71	67	4	52	5.633803e-02	1	exome+100bp flanks	34834024	15	52	4.306135e-07	1.492793e-06
TCGA-BQ-5890-01A-11D-1589-08	97	94	3	75	3.092784e-02	1	exome+100bp flanks	34834024	18	74	5.167362e-07	2.124360e-06
TCGA-BQ-5891-01A-11D-1589-08	44	43	1	27	2.272727e-02	1	exome+100bp flanks	34834024	16	26	4.593210e-07	7.463967e-07
TCGA-BQ-5892-01A-11D-1589-08	86	84	2	71	2.325581e-02	0	coding only	34834024	13	70	3.731983e-07	2.009530e-06
TCGA-BQ-5893-01A-11D-1589-08	63	60	3	42	4.761905e-02	1	exome+100bp flanks	34834024	18	41	5.167362e-07	1.177010e-06
TCGA-BQ-5894-01A-11D-1589-08	41	40	1	34	2.439024e-02	1	exome+100bp flanks	34834024	6	33	1.722454e-07	9.473496e-07
TCGA-BQ-7044-01A-11D-1961-08	89	87	2	68	2.247191e-02	0	coding only	34834024	18	68	5.167362e-07	1.952114e-06
TCGA-BQ-7045-01A-31D-1961-08	94	90	4	65	4.255319e-02	1	exome+100bp flanks	34834024	23	65	6.602740e-07	1.865992e-06
TCGA-BQ-7046-01A-11D-1961-08	51	49	2	39	3.921569e-02	1	exome+100bp flanks	34834024	10	38	2.870756e-07	1.090887e-06
TCGA-BQ-7048-01A-11D-1961-08	91	89	2	70	2.197802e-02	0	coding only	34834024	19	69	5.454437e-07	1.980822e-06
TCGA-BQ-7049-01A-11D-1961-08	41	39	2	30	4.878049e-02	1	exome+100bp flanks	34834024	9	29	2.583681e-07	8.325194e-07
TCGA-BQ-7050-01A-11D-1961-08	26	24	2	20	7.692308e-02	1	exome+100bp flanks	34834024	4	20	1.148303e-07	5.741513e-07
TCGA-BQ-7051-01A-12D-1961-08	111	109	2	79	1.801802e-02	0	coding only	34834024	30	77	8.612269e-07	2.210482e-06
TCGA-BQ-7053-01A-11D-1961-08	67	65	2	52	2.985075e-02	0	coding only	34834024	13	49	3.731983e-07	1.406671e-06
TCGA-BQ-7055-01A-11D-1961-08	16	12	4	8	2.500000e-01	1	exome+100bp flanks	34834024	3	8	8.612269e-08	2.296605e-07
TCGA-BQ-7056-01A-11D-1961-08	46	43	3	33	6.521739e-02	1	exome+100bp flanks	34834024	10	33	2.870756e-07	9.473496e-07
TCGA-BQ-7058-01A-11D-1961-08	86	86	0	72	0	0	coding only	34834024	14	68	4.019059e-07	1.952114e-06
TCGA-BQ-7059-01A-11D-1961-08	89	86	3	64	3.370787e-02	1	exome+100bp flanks	34834024	21	64	6.028589e-07	1.837284e-06
TCGA-BQ-7060-01A-11D-1961-08	46	45	1	36	2.173913e-02	1	exome+100bp flanks	34834024	9	34	2.583681e-07	9.760572e-07
TCGA-BQ-7061-01A-11D-1961-08	91	89	2	73	2.197802e-02	0	coding only	34834024	16	73	4.593210e-07	2.095652e-06
TCGA-BQ-7062-01A-11D-1961-08	50	48	2	39	4.000000e-02	1	exome+100bp flanks	34834024	8	36	2.296605e-07	1.033472e-06
TCGA-DW-5560-01A-01D-1589-08	42	39	3	30	7.142857e-02	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-DW-5561-01A-01D-1589-08	53	53	0	40	0	0	coding only	34834024	12	38	3.444908e-07	1.090887e-06
TCGA-DW-7834-01A-11D-2136-08	71	70	1	51	1.408451e-02	0	coding only	34834024	19	51	5.454437e-07	1.464086e-06
TCGA-DW-7837-01A-11D-2136-08	36	36	0	26	0	1	exome+100bp flanks	34834024	10	26	2.870756e-07	7.463967e-07
TCGA-DW-7838-01A-11D-2136-08	100	100	0	75	0	0	coding only	34834024	24	74	6.889816e-07	2.124360e-06
TCGA-DW-7839-01A-11D-2136-08	49	49	0	44	0	1	exome+100bp flanks	34834024	4	43	1.148303e-07	1.234425e-06
TCGA-DW-7840-01A-11D-2136-08	103	99	4	79	3.883495e-02	1	exome+100bp flanks	34834024	20	78	5.741513e-07	2.239190e-06
TCGA-DW-7841-01A-11D-2136-08	64	61	3	48	4.687500e-02	1	exome+100bp flanks	34834024	12	47	3.444908e-07	1.349256e-06
TCGA-DW-7842-01A-11D-2136-08	30	29	1	25	3.333333e-02	1	exome+100bp flanks	34834024	4	25	1.148303e-07	7.176891e-07
TCGA-DZ-6131-01A-11D-1961-08	36	35	1	24	2.777778e-02	1	exome+100bp flanks	34834024	11	24	3.157832e-07	6.889816e-07
TCGA-DZ-6132-01A-11D-1961-08	137	136	1	117	7.299270e-03	0	coding only	34834024	19	116	5.454437e-07	3.330078e-06
TCGA-DZ-6133-01A-11D-1961-08	132	129	3	103	2.272727e-02	0	coding only	34834024	26	102	7.463967e-07	2.928172e-06
TCGA-DZ-6134-01A-11D-1961-08	60	59	1	42	1.666667e-02	0	coding only	34834024	16	39	4.593210e-07	1.119595e-06
TCGA-DZ-6135-01A-11D-1961-08	40	37	3	24	7.500000e-02	1	exome+100bp flanks	34834024	13	24	3.731983e-07	6.889816e-07
TCGA-EV-5901-01A-11D-1589-08	46	45	1	36	2.173913e-02	1	exome+100bp flanks	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-EV-5902-01A-11D-1589-08	100	99	1	81	1.000000e-02	0	coding only	34834024	17	79	4.880286e-07	2.267898e-06
TCGA-EV-5903-01A-11D-1589-08	126	125	1	100	7.936508e-03	0	coding only	34834024	25	99	7.176891e-07	2.842049e-06
TCGA-G7-6789-01A-11D-1961-08	30	29	1	21	3.333333e-02	1	exome+100bp flanks	34834024	8	21	2.296605e-07	6.028589e-07
TCGA-G7-6790-01A-11D-1961-08	78	78	0	61	0	0	coding only	34834024	16	60	4.593210e-07	1.722454e-06
TCGA-G7-6792-01A-21D-1961-08	43	42	1	29	2.325581e-02	1	exome+100bp flanks	34834024	13	29	3.731983e-07	8.325194e-07
TCGA-G7-6793-01A-11D-1961-08	45	44	1	36	2.222222e-02	1	exome+100bp flanks	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-G7-6795-01A-11D-1961-08	86	84	2	65	2.325581e-02	0	coding only	34834024	19	65	5.454437e-07	1.865992e-06
TCGA-G7-6796-01A-11D-1961-08	66	64	2	50	3.030303e-02	1	exome+100bp flanks	34834024	14	50	4.019059e-07	1.435378e-06
TCGA-G7-6797-01A-11D-1961-08	104	101	3	86	2.884615e-02	0	coding only	34834024	15	86	4.306135e-07	2.468851e-06
TCGA-G7-7501-01A-11D-2201-08	47	46	1	34	2.127660e-02	1	exome+100bp flanks	34834024	10	34	2.870756e-07	9.760572e-07
TCGA-G7-7502-01A-11D-2201-08	80	77	3	60	3.750000e-02	1	exome+100bp flanks	34834024	17	59	4.880286e-07	1.693746e-06
TCGA-GL-6846-01A-11D-1961-08	84	82	2	62	2.380952e-02	0	coding only	34834024	19	62	5.454437e-07	1.779869e-06
TCGA-GL-7773-01A-11D-2136-08	133	131	2	101	1.503759e-02	0	coding only	34834024	30	99	8.612269e-07	2.842049e-06
TCGA-GL-7966-01A-11D-2201-08	51	49	2	33	3.921569e-02	1	exome+100bp flanks	34834024	16	33	4.593210e-07	9.473496e-07
TCGA-HE-7128-01A-11D-1961-08	51	51	0	44	0	0	coding only	34834024	7	44	2.009530e-07	1.263133e-06
TCGA-HE-7129-01A-11D-1961-08	81	78	3	61	3.703704e-02	1	exome+100bp flanks	34834024	17	61	4.880286e-07	1.751161e-06
TCGA-HE-7130-01A-11D-1961-08	220	217	3	173	1.363636e-02	0	coding only	34834024	44	170	1.263133e-06	4.880286e-06
TCGA-J7-6720-01A-11D-2136-08	48	44	4	34	8.333333e-02	1	exome+100bp flanks	34834024	10	31	2.870756e-07	8.899345e-07