Clinical Features CN_CNMF METHLYATION_CNMF MRNASEQ_CNMF MRNASEQ_CHIERARCHICAL MIRSEQ_CNMF MIRSEQ_CHIERARCHICAL nMutated (%) nWild-Type Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q NKX3-1 5 (6%) 78 0.17698 1 0.36635 1 0.84501 1 0.58303 1 0.11811 1 0.14026 1 TP53 5 (6%) 78 0.0058277 0.455 0.36635 1 0.20993 1 0.11723 1 0.49369 1 1 1 FRG1 4 (5%) 79 0.25459 1 0.56994 1 0.36252 1 0.66762 1 0.56505 1 1 1 SPOP 4 (5%) 79 0.014785 1 0.069531 1 0.059613 1 0.009365 0.721 0.56505 1 1 1 YBX1 3 (4%) 80 0.7009 1 0.22479 1 1 1 0.29539 1 1 1 0.59361 1 CCNF 3 (4%) 80 1 1 0.79626 1 0.47082 1 0.43631 1 1 1 1 1 CLSTN1 3 (4%) 80 1 1 0.44141 1 0.61752 1 1 1 0.70715 1 0.32498 1 PRR21 4 (5%) 79 0.7009 1 0.45864 1 1 1 1 1 0.19435 1 1 1 AGT 3 (4%) 80 0.7009 1 1 1 1 1 0.771 1 1 1 0.15967 1 CTNNB1 3 (4%) 80 1 1 0.6027 1 0.47082 1 0.43631 1 0.32182 1 0.32498 1 DUSP27 3 (4%) 80 0.5131 1 0.44141 1 0.61752 1 0.58311 1 0.70715 1 0.32498 1 OR4D5 3 (4%) 80 0.22444 1 1 1 1 1 0.771 1 0.70715 1 1 1 OR6N1 3 (4%) 80 0.36355 1 1 1 1 1 0.771 1 0.077778 1 0.59361 1