Clinical Features	Time to Death		AGE		GENDER		DISTANT.METASTASIS		LYMPH.NODE.METASTASIS		TUMOR.STAGECODE		NEOPLASM.DISEASESTAGE	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Chi-square test_P	Chi-square test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q
1p gain	22 (14%)	136	0.15161	1	0.14278	1	0.63873	1	0.86324	1	0.42993	1	NA	NA	0.05499	1
1q gain	54 (34%)	104	0.32859	1	0.72356	1	0.73319	1	0.73449	1	0.146	1	NA	NA	0.29874	1
2p gain	13 (8%)	145	0.77866	1	0.15658	1	0.25097	1	0.95314	1	0.79986	1	NA	NA	0.77945	1
2q gain	11 (7%)	147	0.6132	1	0.46617	1	0.52946	1	0.96716	1	0.80873	1	NA	NA	0.67349	1
3p gain	16 (10%)	142	0.95466	1	0.4433	1	0.42131	1	0.92786	1	0.32513	1	NA	NA	0.74676	1
3q gain	21 (13%)	137	0.63971	1	0.2753	1	0.47364	1	0.87521	1	0.27791	1	NA	NA	0.80485	1
4p gain	16 (10%)	142	0.36943	1	0.090958	1	0.78899	1	0.93684	1	0.25392	1	NA	NA	0.056487	1
4q gain	12 (8%)	146	0.38939	1	0.092811	1	0.76576	1	0.97329	1	0.47736	1	NA	NA	0.04709	1
5p gain	17 (11%)	141	0.030666	1	0.44505	1	0.60041	1	0.022393	1	0.65615	1	NA	NA	0.65907	1
5q gain	6 (4%)	152	0.35404	1	0.22671	1	1	1	0.99162	1	0.34699	1	NA	NA	0.53036	1
6p gain	55 (35%)	103	0.64792	1	0.51269	1	0.17108	1	0.73488	1	0.41623	1	NA	NA	0.42962	1
6q gain	12 (8%)	146	0.7164	1	0.80037	1	0.54112	1	0.24904	1	0.92152	1	NA	NA	0.44001	1
7p gain	68 (43%)	90	0.5576	1	0.84285	1	0.41353	1	0.058183	1	0.22507	1	NA	NA	0.052225	1
7q gain	68 (43%)	90	0.91263	1	0.28451	1	0.87016	1	0.069372	1	0.25443	1	NA	NA	0.013834	1
8p gain	32 (20%)	126	0.70965	1	0.40365	1	0.32002	1	0.053408	1	0.68373	1	NA	NA	0.17854	1
8q gain	48 (30%)	110	0.96236	1	0.10875	1	0.37703	1	0.18057	1	0.61383	1	NA	NA	0.53395	1
11p gain	9 (6%)	149	0.97859	1	0.75402	1	0.48421	1	0.9788	1	0.048468	1	NA	NA	0.69484	1
11q gain	6 (4%)	152	0.25326	1	0.87789	1	0.40467	1	0.99162	1	0.8333	1	NA	NA	0.53288	1
12p gain	15 (9%)	143	0.64701	1	0.098043	1	0.40736	1	0.10509	1	0.60619	1	NA	NA	0.2392	1
12q gain	5 (3%)	153	0.9572	1	0.55662	1	0.649	1	0.99462	1	0.016592	1	NA	NA	0.018085	1
13q gain	27 (17%)	131	0.34977	1	0.37328	1	0.52502	1	0.6054	1	0.10239	1	NA	NA	0.084048	1
14q gain	13 (8%)	145	0.72508	1	0.98266	1	0.56983	1	0.96045	1	0.81889	1	NA	NA	0.88534	1
15q gain	20 (13%)	138	0.77834	1	0.78812	1	1	1	0.89776	1	0.8109	1	NA	NA	0.8049	1
16p gain	11 (7%)	147	0.99544	1	0.66522	1	1	1	0.96045	1	0.89919	1	NA	NA	0.55782	1
16q gain	10 (6%)	148	0.81934	1	0.99273	1	0.74115	1	0.96716	1	0.8573	1	NA	NA	0.83954	1
17p gain	12 (8%)	146	0.36205	1	0.58376	1	1	1	0.19926	1	0.78777	1	NA	NA	0.039059	1
17q gain	20 (13%)	138	0.50542	1	0.13676	1	0.62792	1	0.52134	1	0.35223	1	NA	NA	0.10845	1
18p gain	19 (12%)	139	0.87337	1	0.17989	1	0.21914	1	0.49281	1	0.27316	1	NA	NA	1.3297e-05	0.00577
18q gain	11 (7%)	147	0.86314	1	0.49618	1	0.3429	1	0.97329	1	0.40258	1	NA	NA	1.1248e-06	0.000489
19p gain	10 (6%)	148	0.14854	1	0.30347	1	0.51551	1	0.9788	1	0.98534	1	NA	NA	0.75205	1
19q gain	12 (8%)	146	0.46237	1	0.3286	1	0.21913	1	0.96716	1	0.5512	1	NA	NA	0.53494	1
20p gain	48 (30%)	110	0.85446	1	0.84441	1	0.59634	1	0.18057	1	0.75325	1	NA	NA	0.68104	1
20q gain	59 (37%)	99	0.4339	1	0.59249	1	0.31592	1	0.041906	1	0.94751	1	NA	NA	0.63913	1
21q gain	21 (13%)	137	0.548	1	0.93203	1	0.47364	1	0.27565	1	0.23577	1	NA	NA	0.041945	1
22q gain	43 (27%)	115	0.20699	1	0.92101	1	0.46758	1	0.35213	1	0.1121	1	NA	NA	0.041326	1
Xq gain	3 (2%)	155	0.61988	1	0.069875	1	0.28017	1	NA	NA	NA	NA	NA	NA	NA	NA
1p loss	12 (8%)	146	0.10676	1	0.91871	1	1	1	0.97329	1	0.23717	1	NA	NA	0.22979	1
1q loss	6 (4%)	152	0.96071	1	0.46442	1	0.67997	1	0.98798	1	0.51064	1	NA	NA	0.83963	1
2p loss	14 (9%)	144	0.094408	1	0.87395	1	1	1	0.96045	1	0.90901	1	NA	NA	0.25302	1
2q loss	13 (8%)	145	0.15382	1	0.48212	1	0.76797	1	0.014947	1	0.92281	1	NA	NA	0.13174	1
3p loss	11 (7%)	147	0.44621	1	0.4116	1	0.75264	1	0.9788	1	0.075584	1	NA	NA	0.51674	1
3q loss	11 (7%)	147	0.51929	1	0.40805	1	0.3429	1	0.97329	1	0.14887	1	NA	NA	0.36906	1
4p loss	16 (10%)	142	0.72257	1	0.20947	1	0.058812	1	0.033258	1	0.77443	1	NA	NA	0.50899	1
4q loss	16 (10%)	142	0.70641	1	0.49438	1	0.058812	1	0.033258	1	0.77975	1	NA	NA	0.52701	1
5p loss	22 (14%)	136	0.90591	1	0.71749	1	0.81829	1	0.89776	1	0.86123	1	NA	NA	0.94846	1
5q loss	33 (21%)	125	0.91875	1	0.75979	1	0.54845	1	0.55044	1	0.59551	1	NA	NA	0.96156	1
6p loss	14 (9%)	144	0.88805	1	0.93928	1	0.78095	1	0.94527	1	0.86832	1	NA	NA	0.28763	1
6q loss	64 (41%)	94	0.54145	1	0.17777	1	0.86835	1	0.35331	1	0.39707	1	NA	NA	0.44581	1
8p loss	21 (13%)	137	0.5408	1	0.69623	1	0.63628	1	0.087336	1	0.49931	1	NA	NA	0.29753	1
8q loss	3 (2%)	155	0.26288	1	0.6302	1	0.05864	1	0.99696	1	0.45316	1	NA	NA	0.48885	1
9p loss	91 (58%)	67	0.38059	1	0.29292	1	0.74248	1	0.6731	1	0.023385	1	NA	NA	0.062856	1
9q loss	72 (46%)	86	0.91704	1	0.044968	1	0.033698	1	0.42446	1	0.46604	1	NA	NA	0.039674	1
10p loss	69 (44%)	89	0.2093	1	0.28391	1	0.13915	1	0.29429	1	0.17046	1	NA	NA	0.95712	1
10q loss	76 (48%)	82	0.65955	1	0.0054586	1	0.19436	1	0.26807	1	0.23903	1	NA	NA	0.92841	1
11p loss	41 (26%)	117	0.085782	1	0.57959	1	0.093775	1	0.093398	1	0.093456	1	NA	NA	0.011331	1
11q loss	44 (28%)	114	0.03449	1	0.63639	1	0.10275	1	0.13385	1	0.089029	1	NA	NA	0.0042173	1
12p loss	9 (6%)	149	0.61813	1	0.98185	1	0.31611	1	0.10345	1	0.16064	1	NA	NA	0.8314	1
12q loss	17 (11%)	141	0.83804	1	0.86307	1	0.29345	1	0.13589	1	0.52272	1	NA	NA	0.64874	1
13q loss	25 (16%)	133	0.96216	1	0.46474	1	0.65768	1	0.091862	1	0.12476	1	NA	NA	0.61695	1
14q loss	39 (25%)	119	0.5796	1	0.3196	1	0.45189	1	0.10955	1	0.46473	1	NA	NA	0.25923	1
15q loss	11 (7%)	147	0.79483	1	0.28726	1	0.75264	1	0.0087378	1	0.34442	1	NA	NA	0.81485	1
16p loss	12 (8%)	146	0.31632	1	0.54562	1	0.21913	1	0.97329	1	0.89569	1	NA	NA	0.17871	1
16q loss	28 (18%)	130	0.0048187	1	0.85447	1	0.40164	1	0.12228	1	0.68254	1	NA	NA	0.17343	1
17p loss	37 (23%)	121	0.27673	1	0.42074	1	0.7008	1	0.27605	1	0.70808	1	NA	NA	0.61985	1
17q loss	16 (10%)	142	0.094005	1	0.98257	1	1	1	0.10509	1	0.1449	1	NA	NA	0.4094	1
18p loss	32 (20%)	126	0.46469	1	0.4893	1	0.84272	1	0.76788	1	0.079902	1	NA	NA	0.22823	1
18q loss	28 (18%)	130	0.2745	1	0.65811	1	1	1	0.20397	1	0.48393	1	NA	NA	0.27094	1
19p loss	13 (8%)	145	0.71132	1	0.44556	1	0.034627	1	0.0033998	1	0.62078	1	NA	NA	0.38073	1
19q loss	15 (9%)	143	0.7865	1	0.91395	1	0.099713	1	0.0033998	1	0.51781	1	NA	NA	0.65861	1
20p loss	6 (4%)	152	0.31079	1	0.28235	1	0.40467	1	0.031649	1	0.97428	1	NA	NA	0.57308	1
21q loss	20 (13%)	138	0.78555	1	0.93953	1	0.62792	1	0.88673	1	0.846	1	NA	NA	0.13268	1
22q loss	11 (7%)	147	0.88015	1	0.69248	1	0.3429	1	0.96045	1	0.97013	1	NA	NA	0.36966	1
Xq loss	6 (4%)	152	0.70225	1	0.50114	1	0.03478	1	0.99462	1	0.97479	1	NA	NA	0.84568	1