| GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3140313/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/BRCA-TP/3140310/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt |
| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3143570/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3142940/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | BRCA-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3139795/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/3139790/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3139794/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/3139798/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3139838/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/3139836/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 16:50:15 03-05-13 |
| Completed: | |
| Elapsed: | 00 hrs 01 mins 28 secs |
step 1. GDAC_mergedClustering [id: 399215] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3140313/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/BRCA-TP/3140310/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt |
| mirnacnmf | |
| mirnahc | |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3143570/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3142940/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| mergedfile | BRCA-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3139795/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/3139790/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3139794/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/3139798/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3139838/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/3139836/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt |
| Output Files: | |
| BRCA-TP.transferedmergedcluster.txt | |
| BRCA-TP.mergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 16:50:15 03-05-13 |
| Completed: | 16:50:41 03-05-13 |
| Elapsed: | 00 hrs 00 mins 26 secs |
step 2. GDAC_mergedReport [id: 399216]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | BRCA-TP.transferedmergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 16:50:15 03-05-13 |
| Completed: | 16:51:43 03-05-13 |
| Elapsed: | 00 hrs 01 mins 27 secs |