# Created: Fri May 03 16:50:41 EDT 2013 by cgaadm_deadline
# Job: 399215    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: GDAC_mergedClustering urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
# Parameters: 
#    mrnacnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3140313/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    mrnahc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/BRCA-TP/3140310/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt
#    mirnacnmf = 
#    mirnahc = 
#    copynumber = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3143570/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    methlyationhc = 
#    methlyationcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3142940/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    mergedfile = BRCA-TP
#    PredictionU133aTCGA = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3139795/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    PredictionU133aPhilips = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/3139790/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt
#    PredictionUNCTCGA = 
#    mRNAseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3139794/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    mRNAseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/3139798/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt
#    miRseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/BRCA-TP/3139838/3.GDAC_CNMFselectcluster.Finished/BRCA-TP.bestclus.txt
#    miRseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/BRCA-TP/3139836/3.GDAC_selectBestcluster.Finished/BRCA-TP.bestclus.txt
