
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.4.4139/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.4.4139/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/411528/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/CESC-TP/3143057/1.GDAC_mergedClustering.Finished/CESC-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=CESC-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=CESC-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=134, in cluster file=126, common to both=126
[1]  52 126
[1] "Amp Peak  1(1q21.3)"
[1] 3
      AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE 
                           67                            59 
      AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE 
                           67                            59 
[1] "Amp Peak  2(1q44)"
[1] 3
      AMP PEAK  2(1Q44) CNV AMP PEAK  2(1Q44) WILD-TYPE 
                         68                          58 
      AMP PEAK  2(1Q44) CNV AMP PEAK  2(1Q44) WILD-TYPE 
                         68                          58 
[1] "Amp Peak  3(2p24.3)"
[1] 3
      AMP PEAK  3(2P24.3) CNV AMP PEAK  3(2P24.3) WILD-TYPE 
                           33                            93 
      AMP PEAK  3(2P24.3) CNV AMP PEAK  3(2P24.3) WILD-TYPE 
                           33                            93 
[1] "Amp Peak  4(2q32.3)"
[1] 3
      AMP PEAK  4(2Q32.3) CNV AMP PEAK  4(2Q32.3) WILD-TYPE 
                           20                           106 
      AMP PEAK  4(2Q32.3) CNV AMP PEAK  4(2Q32.3) WILD-TYPE 
                           20                           106 
[1] "Amp Peak  5(3q26.2)"
[1] 3
      AMP PEAK  5(3Q26.2) CNV AMP PEAK  5(3Q26.2) WILD-TYPE 
                           95                            31 
      AMP PEAK  5(3Q26.2) CNV AMP PEAK  5(3Q26.2) WILD-TYPE 
                           95                            31 
[1] "Amp Peak  6(3q28)"
[1] 3
      AMP PEAK  6(3Q28) CNV AMP PEAK  6(3Q28) WILD-TYPE 
                         94                          32 
      AMP PEAK  6(3Q28) CNV AMP PEAK  6(3Q28) WILD-TYPE 
                         94                          32 
[1] "Amp Peak  7(4q12)"
[1] 3
      AMP PEAK  7(4Q12) CNV AMP PEAK  7(4Q12) WILD-TYPE 
                         12                         114 
      AMP PEAK  7(4Q12) CNV AMP PEAK  7(4Q12) WILD-TYPE 
                         12                         114 
[1] "Amp Peak  8(6p21.33)"
[1] 3
      AMP PEAK  8(6P21.33) CNV AMP PEAK  8(6P21.33) WILD-TYPE 
                            35                             91 
      AMP PEAK  8(6P21.33) CNV AMP PEAK  8(6P21.33) WILD-TYPE 
                            35                             91 
[1] "Amp Peak  9(6q12)"
[1] 3
      AMP PEAK  9(6Q12) CNV AMP PEAK  9(6Q12) WILD-TYPE 
                         24                         102 
      AMP PEAK  9(6Q12) CNV AMP PEAK  9(6Q12) WILD-TYPE 
                         24                         102 
[1] "Amp Peak 10(8q24.21)"
[1] 3
      AMP PEAK 10(8Q24.21) CNV AMP PEAK 10(8Q24.21) WILD-TYPE 
                            53                             73 
      AMP PEAK 10(8Q24.21) CNV AMP PEAK 10(8Q24.21) WILD-TYPE 
                            53                             73 
[1] "Amp Peak 11(8q24.21)"
[1] 3
      AMP PEAK 11(8Q24.21) CNV AMP PEAK 11(8Q24.21) WILD-TYPE 
                            48                             78 
      AMP PEAK 11(8Q24.21) CNV AMP PEAK 11(8Q24.21) WILD-TYPE 
                            48                             78 
[1] "Amp Peak 12(9p24.1)"
[1] 3
      AMP PEAK 12(9P24.1) CNV AMP PEAK 12(9P24.1) WILD-TYPE 
                           28                            98 
      AMP PEAK 12(9P24.1) CNV AMP PEAK 12(9P24.1) WILD-TYPE 
                           28                            98 
[1] "Amp Peak 13(11q13.3)"
[1] 3
      AMP PEAK 13(11Q13.3) CNV AMP PEAK 13(11Q13.3) WILD-TYPE 
                            18                            108 
      AMP PEAK 13(11Q13.3) CNV AMP PEAK 13(11Q13.3) WILD-TYPE 
                            18                            108 
[1] "Amp Peak 14(11q22.1)"
[1] 3
      AMP PEAK 14(11Q22.1) CNV AMP PEAK 14(11Q22.1) WILD-TYPE 
                            27                             99 
      AMP PEAK 14(11Q22.1) CNV AMP PEAK 14(11Q22.1) WILD-TYPE 
                            27                             99 
[1] "Amp Peak 15(13q22.1)"
[1] 3
      AMP PEAK 15(13Q22.1) CNV AMP PEAK 15(13Q22.1) WILD-TYPE 
                            27                             99 
      AMP PEAK 15(13Q22.1) CNV AMP PEAK 15(13Q22.1) WILD-TYPE 
                            27                             99 
[1] "Amp Peak 16(14q24.1)"
[1] 3
      AMP PEAK 16(14Q24.1) CNV AMP PEAK 16(14Q24.1) WILD-TYPE 
                            25                            101 
      AMP PEAK 16(14Q24.1) CNV AMP PEAK 16(14Q24.1) WILD-TYPE 
                            25                            101 
[1] "Amp Peak 17(15q26.3)"
[1] 3
      AMP PEAK 17(15Q26.3) CNV AMP PEAK 17(15Q26.3) WILD-TYPE 
                            30                             96 
      AMP PEAK 17(15Q26.3) CNV AMP PEAK 17(15Q26.3) WILD-TYPE 
                            30                             96 
[1] "Amp Peak 18(16p13.2)"
[1] 3
      AMP PEAK 18(16P13.2) CNV AMP PEAK 18(16P13.2) WILD-TYPE 
                            27                             99 
      AMP PEAK 18(16P13.2) CNV AMP PEAK 18(16P13.2) WILD-TYPE 
                            27                             99 
[1] "Amp Peak 19(16p13.13)"
[1] 3
      AMP PEAK 19(16P13.13) CNV AMP PEAK 19(16P13.13) WILD-TYPE 
                             30                              96 
      AMP PEAK 19(16P13.13) CNV AMP PEAK 19(16P13.13) WILD-TYPE 
                             30                              96 
[1] "Amp Peak 20(17q12)"
[1] 3
      AMP PEAK 20(17Q12) CNV AMP PEAK 20(17Q12) WILD-TYPE 
                          21                          105 
      AMP PEAK 20(17Q12) CNV AMP PEAK 20(17Q12) WILD-TYPE 
                          21                          105 
[1] "Amp Peak 21(17q25.1)"
[1] 3
      AMP PEAK 21(17Q25.1) CNV AMP PEAK 21(17Q25.1) WILD-TYPE 
                            34                             92 
      AMP PEAK 21(17Q25.1) CNV AMP PEAK 21(17Q25.1) WILD-TYPE 
                            34                             92 
[1] "Amp Peak 22(19q13.31)"
[1] 3
      AMP PEAK 22(19Q13.31) CNV AMP PEAK 22(19Q13.31) WILD-TYPE 
                             43                              83 
      AMP PEAK 22(19Q13.31) CNV AMP PEAK 22(19Q13.31) WILD-TYPE 
                             43                              83 
[1] "Amp Peak 23(20q11.21)"
[1] 3
      AMP PEAK 23(20Q11.21) CNV AMP PEAK 23(20Q11.21) WILD-TYPE 
                             61                              65 
      AMP PEAK 23(20Q11.21) CNV AMP PEAK 23(20Q11.21) WILD-TYPE 
                             61                              65 
[1] "Amp Peak 24(Xq28)"
[1] 3
      AMP PEAK 24(XQ28) CNV AMP PEAK 24(XQ28) WILD-TYPE 
                         36                          90 
      AMP PEAK 24(XQ28) CNV AMP PEAK 24(XQ28) WILD-TYPE 
                         36                          90 
[1] "Del Peak  1(1p36.23)"
[1] 3
      DEL PEAK  1(1P36.23) CNV DEL PEAK  1(1P36.23) WILD-TYPE 
                            20                            106 
      DEL PEAK  1(1P36.23) CNV DEL PEAK  1(1P36.23) WILD-TYPE 
                            20                            106 
[1] "Del Peak  2(1p13.1)"
[1] 3
      DEL PEAK  2(1P13.1) CNV DEL PEAK  2(1P13.1) WILD-TYPE 
                           12                           114 
      DEL PEAK  2(1P13.1) CNV DEL PEAK  2(1P13.1) WILD-TYPE 
                           12                           114 
[1] "Del Peak  3(2q22.1)"
[1] 3
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                           22                           104 
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                           22                           104 
[1] "Del Peak  4(2q37.1)"
[1] 3
      DEL PEAK  4(2Q37.1) CNV DEL PEAK  4(2Q37.1) WILD-TYPE 
                           51                            75 
      DEL PEAK  4(2Q37.1) CNV DEL PEAK  4(2Q37.1) WILD-TYPE 
                           51                            75 
[1] "Del Peak  5(3p11.1)"
[1] 3
      DEL PEAK  5(3P11.1) CNV DEL PEAK  5(3P11.1) WILD-TYPE 
                           51                            75 
      DEL PEAK  5(3P11.1) CNV DEL PEAK  5(3P11.1) WILD-TYPE 
                           51                            75 
[1] "Del Peak  6(4q22.1)"
[1] 3
      DEL PEAK  6(4Q22.1) CNV DEL PEAK  6(4Q22.1) WILD-TYPE 
                           39                            87 
      DEL PEAK  6(4Q22.1) CNV DEL PEAK  6(4Q22.1) WILD-TYPE 
                           39                            87 
[1] "Del Peak  7(4q35.2)"
[1] 3
      DEL PEAK  7(4Q35.2) CNV DEL PEAK  7(4Q35.2) WILD-TYPE 
                           47                            79 
      DEL PEAK  7(4Q35.2) CNV DEL PEAK  7(4Q35.2) WILD-TYPE 
                           47                            79 
[1] "Del Peak  8(5q14.3)"
[1] 3
      DEL PEAK  8(5Q14.3) CNV DEL PEAK  8(5Q14.3) WILD-TYPE 
                           36                            90 
      DEL PEAK  8(5Q14.3) CNV DEL PEAK  8(5Q14.3) WILD-TYPE 
                           36                            90 
[1] "Del Peak  9(6p24.3)"
[1] 3
      DEL PEAK  9(6P24.3) CNV DEL PEAK  9(6P24.3) WILD-TYPE 
                           18                           108 
      DEL PEAK  9(6P24.3) CNV DEL PEAK  9(6P24.3) WILD-TYPE 
                           18                           108 
[1] "Del Peak 10(6p12.1)"
[1] 3
      DEL PEAK 10(6P12.1) CNV DEL PEAK 10(6P12.1) WILD-TYPE 
                           20                           106 
      DEL PEAK 10(6P12.1) CNV DEL PEAK 10(6P12.1) WILD-TYPE 
                           20                           106 
[1] "Del Peak 11(6q26)"
[1] 3
      DEL PEAK 11(6Q26) CNV DEL PEAK 11(6Q26) WILD-TYPE 
                         48                          78 
      DEL PEAK 11(6Q26) CNV DEL PEAK 11(6Q26) WILD-TYPE 
                         48                          78 
[1] "Del Peak 12(7q34)"
[1] 3
      DEL PEAK 12(7Q34) CNV DEL PEAK 12(7Q34) WILD-TYPE 
                         28                          98 
      DEL PEAK 12(7Q34) CNV DEL PEAK 12(7Q34) WILD-TYPE 
                         28                          98 
[1] "Del Peak 13(10q23.31)"
[1] 3
      DEL PEAK 13(10Q23.31) CNV DEL PEAK 13(10Q23.31) WILD-TYPE 
                             39                              87 
      DEL PEAK 13(10Q23.31) CNV DEL PEAK 13(10Q23.31) WILD-TYPE 
                             39                              87 
[1] "Del Peak 14(10q26.3)"
[1] 3
      DEL PEAK 14(10Q26.3) CNV DEL PEAK 14(10Q26.3) WILD-TYPE 
                            38                             88 
      DEL PEAK 14(10Q26.3) CNV DEL PEAK 14(10Q26.3) WILD-TYPE 
                            38                             88 
[1] "Del Peak 15(11p15.1)"
[1] 3
      DEL PEAK 15(11P15.1) CNV DEL PEAK 15(11P15.1) WILD-TYPE 
                            40                             86 
      DEL PEAK 15(11P15.1) CNV DEL PEAK 15(11P15.1) WILD-TYPE 
                            40                             86 
[1] "Del Peak 16(11q25)"
[1] 3
      DEL PEAK 16(11Q25) CNV DEL PEAK 16(11Q25) WILD-TYPE 
                          74                           52 
      DEL PEAK 16(11Q25) CNV DEL PEAK 16(11Q25) WILD-TYPE 
                          74                           52 
[1] "Del Peak 17(13q13.3)"
[1] 3
      DEL PEAK 17(13Q13.3) CNV DEL PEAK 17(13Q13.3) WILD-TYPE 
                            52                             74 
      DEL PEAK 17(13Q13.3) CNV DEL PEAK 17(13Q13.3) WILD-TYPE 
                            52                             74 
[1] "Del Peak 18(14q32.31)"
[1] 3
      DEL PEAK 18(14Q32.31) CNV DEL PEAK 18(14Q32.31) WILD-TYPE 
                             25                             101 
      DEL PEAK 18(14Q32.31) CNV DEL PEAK 18(14Q32.31) WILD-TYPE 
                             25                             101 
[1] "Del Peak 19(15q15.1)"
[1] 3
      DEL PEAK 19(15Q15.1) CNV DEL PEAK 19(15Q15.1) WILD-TYPE 
                            29                             97 
      DEL PEAK 19(15Q15.1) CNV DEL PEAK 19(15Q15.1) WILD-TYPE 
                            29                             97 
[1] "Del Peak 20(16q11.2)"
[1] 3
      DEL PEAK 20(16Q11.2) CNV DEL PEAK 20(16Q11.2) WILD-TYPE 
                            25                            101 
      DEL PEAK 20(16Q11.2) CNV DEL PEAK 20(16Q11.2) WILD-TYPE 
                            25                            101 
[1] "Del Peak 21(16q23.1)"
[1] 3
      DEL PEAK 21(16Q23.1) CNV DEL PEAK 21(16Q23.1) WILD-TYPE 
                            28                             98 
      DEL PEAK 21(16Q23.1) CNV DEL PEAK 21(16Q23.1) WILD-TYPE 
                            28                             98 
[1] "Del Peak 22(17p12)"
[1] 3
      DEL PEAK 22(17P12) CNV DEL PEAK 22(17P12) WILD-TYPE 
                          42                           84 
      DEL PEAK 22(17P12) CNV DEL PEAK 22(17P12) WILD-TYPE 
                          42                           84 
[1] "Del Peak 23(17q25.3)"
[1] 3
      DEL PEAK 23(17Q25.3) CNV DEL PEAK 23(17Q25.3) WILD-TYPE 
                            22                            104 
      DEL PEAK 23(17Q25.3) CNV DEL PEAK 23(17Q25.3) WILD-TYPE 
                            22                            104 
[1] "Del Peak 24(19p13.3)"
[1] 3
      DEL PEAK 24(19P13.3) CNV DEL PEAK 24(19P13.3) WILD-TYPE 
                            39                             87 
      DEL PEAK 24(19P13.3) CNV DEL PEAK 24(19P13.3) WILD-TYPE 
                            39                             87 
[1] "Del Peak 25(20p12.1)"
[1] 3
      DEL PEAK 25(20P12.1) CNV DEL PEAK 25(20P12.1) WILD-TYPE 
                            17                            109 
      DEL PEAK 25(20P12.1) CNV DEL PEAK 25(20P12.1) WILD-TYPE 
                            17                            109 
[1] "Del Peak 26(21q21.1)"
[1] 3
      DEL PEAK 26(21Q21.1) CNV DEL PEAK 26(21Q21.1) WILD-TYPE 
                            27                             99 
      DEL PEAK 26(21Q21.1) CNV DEL PEAK 26(21Q21.1) WILD-TYPE 
                            27                             99 
[1] "Del Peak 27(Xp11.3)"
[1] 3
      DEL PEAK 27(XP11.3) CNV DEL PEAK 27(XP11.3) WILD-TYPE 
                           37                            89 
      DEL PEAK 27(XP11.3) CNV DEL PEAK 27(XP11.3) WILD-TYPE 
                           37                            89 
[1] "Del Peak 28(Xq21.33)"
[1] 3
      DEL PEAK 28(XQ21.33) CNV DEL PEAK 28(XQ21.33) WILD-TYPE 
                            27                             99 
      DEL PEAK 28(XQ21.33) CNV DEL PEAK 28(XQ21.33) WILD-TYPE 
                            27                             99 
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "MRNASEQ_CNMF"         
[4] "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 

Input Data has 6 rows and 126 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "MRNASEQ_CNMF"         
[4] "MRNASEQ_CHIERARCHICAL" "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 126 columns, 0 survival variables, and 6 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=2, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1q21.3)
D1V1, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                      30                            12
  CLUS_2                      16                            16
  CLUS_3                      21                            31
D1V2, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                      23                            30
  CLUS_2                      27                            14
  CLUS_3                      17                            15
D1V3, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                      27                            23
  CLUS_2                      13                            17
  CLUS_3                      19                            12
D1V4, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                       7                             4
  CLUS_2                      32                            32
  CLUS_3                      20                            16
D1V5, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                      18                            15
  CLUS_2                      19                            24
  CLUS_3                       9                             4
  CLUS_4                      21                            16
D1V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  1(1Q21.3) CNV         44   23
  AMP PEAK  1(1Q21.3) WILD-TYPE   44   15
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                      44                            44
  CLUS_2                      23                            15

Clustering(2) Variable = Amp Peak  2(1q44)
D2V1, multiclass
        clus
vv       AMP PEAK  2(1Q44) CNV AMP PEAK  2(1Q44) WILD-TYPE
  CLUS_1                    29                          13
  CLUS_2                    19                          13
  CLUS_3                    20                          32
D2V2, multiclass
        clus
vv       AMP PEAK  2(1Q44) CNV AMP PEAK  2(1Q44) WILD-TYPE
  CLUS_1                    27                          26
  CLUS_2                    24                          17
  CLUS_3                    17                          15
D2V3, multiclass
        clus
vv       AMP PEAK  2(1Q44) CNV AMP PEAK  2(1Q44) WILD-TYPE
  CLUS_1                    27                          23
  CLUS_2                    14                          16
  CLUS_3                    19                          12
D2V4, multiclass
        clus
vv       AMP PEAK  2(1Q44) CNV AMP PEAK  2(1Q44) WILD-TYPE
  CLUS_1                     6                           5
  CLUS_2                    35                          29
  CLUS_3                    19                          17
D2V5, multiclass
        clus
vv       AMP PEAK  2(1Q44) CNV AMP PEAK  2(1Q44) WILD-TYPE
  CLUS_1                    16                          17
  CLUS_2                    24                          19
  CLUS_3                     7                           6
  CLUS_4                    21                          16
D2V6, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  2(1Q44) CNV         45   23
  AMP PEAK  2(1Q44) WILD-TYPE   43   15
        clus
vv       AMP PEAK  2(1Q44) CNV AMP PEAK  2(1Q44) WILD-TYPE
  CLUS_1                    45                          43
  CLUS_2                    23                          15

Clustering(3) Variable = Amp Peak  3(2p24.3)
D3V1, multiclass
        clus
vv       AMP PEAK  3(2P24.3) CNV AMP PEAK  3(2P24.3) WILD-TYPE
  CLUS_1                      13                            29
  CLUS_2                      11                            21
  CLUS_3                       9                            43
D3V2, multiclass
        clus
vv       AMP PEAK  3(2P24.3) CNV AMP PEAK  3(2P24.3) WILD-TYPE
  CLUS_1                      12                            41
  CLUS_2                      10                            31
  CLUS_3                      11                            21
D3V3, multiclass
        clus
vv       AMP PEAK  3(2P24.3) CNV AMP PEAK  3(2P24.3) WILD-TYPE
  CLUS_1                       9                            41
  CLUS_2                       8                            22
  CLUS_3                      13                            18
D3V4, multiclass
        clus
vv       AMP PEAK  3(2P24.3) CNV AMP PEAK  3(2P24.3) WILD-TYPE
  CLUS_1                       4                             7
  CLUS_2                      12                            52
  CLUS_3                      14                            22
D3V5, multiclass
        clus
vv       AMP PEAK  3(2P24.3) CNV AMP PEAK  3(2P24.3) WILD-TYPE
  CLUS_1                       7                            26
  CLUS_2                      11                            32
  CLUS_3                       2                            11
  CLUS_4                      13                            24
D3V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  3(2P24.3) CNV         19   14
  AMP PEAK  3(2P24.3) WILD-TYPE   69   24
        clus
vv       AMP PEAK  3(2P24.3) CNV AMP PEAK  3(2P24.3) WILD-TYPE
  CLUS_1                      19                            69
  CLUS_2                      14                            24

Clustering(4) Variable = Amp Peak  4(2q32.3)
D4V1, multiclass
        clus
vv       AMP PEAK  4(2Q32.3) CNV AMP PEAK  4(2Q32.3) WILD-TYPE
  CLUS_1                       9                            33
  CLUS_2                      10                            22
  CLUS_3                       1                            51
D4V2, multiclass
        clus
vv       AMP PEAK  4(2Q32.3) CNV AMP PEAK  4(2Q32.3) WILD-TYPE
  CLUS_1                       4                            49
  CLUS_2                       9                            32
  CLUS_3                       7                            25
D4V3, multiclass
        clus
vv       AMP PEAK  4(2Q32.3) CNV AMP PEAK  4(2Q32.3) WILD-TYPE
  CLUS_1                       1                            49
  CLUS_2                       9                            21
  CLUS_3                       6                            25
D4V4, multiclass
        clus
vv       AMP PEAK  4(2Q32.3) CNV AMP PEAK  4(2Q32.3) WILD-TYPE
  CLUS_1                       4                             7
  CLUS_2                       4                            60
  CLUS_3                       8                            28
D4V5, multiclass
        clus
vv       AMP PEAK  4(2Q32.3) CNV AMP PEAK  4(2Q32.3) WILD-TYPE
  CLUS_1                       3                            30
  CLUS_2                       9                            34
  CLUS_3                       1                            12
  CLUS_4                       7                            30
D4V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  4(2Q32.3) CNV         14    6
  AMP PEAK  4(2Q32.3) WILD-TYPE   74   32
        clus
vv       AMP PEAK  4(2Q32.3) CNV AMP PEAK  4(2Q32.3) WILD-TYPE
  CLUS_1                      14                            74
  CLUS_2                       6                            32

Clustering(5) Variable = Amp Peak  5(3q26.2)
D5V1, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) CNV AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                      42                             0
  CLUS_2                      20                            12
  CLUS_3                      33                            19
D5V2, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) CNV AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                      41                            12
  CLUS_2                      32                             9
  CLUS_3                      22                            10
D5V3, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) CNV AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                      43                             7
  CLUS_2                      20                            10
  CLUS_3                      22                             9
D5V4, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) CNV AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                      10                             1
  CLUS_2                      50                            14
  CLUS_3                      25                            11
D5V5, multiclass
        clus
vv       AMP PEAK  5(3Q26.2) CNV AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                      30                             3
  CLUS_2                      29                            14
  CLUS_3                      12                             1
  CLUS_4                      24                            13
D5V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  5(3Q26.2) CNV         69   26
  AMP PEAK  5(3Q26.2) WILD-TYPE   19   12
        clus
vv       AMP PEAK  5(3Q26.2) CNV AMP PEAK  5(3Q26.2) WILD-TYPE
  CLUS_1                      69                            19
  CLUS_2                      26                            12

Clustering(6) Variable = Amp Peak  6(3q28)
D6V1, multiclass
        clus
vv       AMP PEAK  6(3Q28) CNV AMP PEAK  6(3Q28) WILD-TYPE
  CLUS_1                    42                           0
  CLUS_2                    19                          13
  CLUS_3                    33                          19
D6V2, multiclass
        clus
vv       AMP PEAK  6(3Q28) CNV AMP PEAK  6(3Q28) WILD-TYPE
  CLUS_1                    41                          12
  CLUS_2                    31                          10
  CLUS_3                    22                          10
D6V3, multiclass
        clus
vv       AMP PEAK  6(3Q28) CNV AMP PEAK  6(3Q28) WILD-TYPE
  CLUS_1                    43                           7
  CLUS_2                    19                          11
  CLUS_3                    22                           9
D6V4, multiclass
        clus
vv       AMP PEAK  6(3Q28) CNV AMP PEAK  6(3Q28) WILD-TYPE
  CLUS_1                    10                           1
  CLUS_2                    49                          15
  CLUS_3                    25                          11
D6V5, multiclass
        clus
vv       AMP PEAK  6(3Q28) CNV AMP PEAK  6(3Q28) WILD-TYPE
  CLUS_1                    30                           3
  CLUS_2                    28                          15
  CLUS_3                    12                           1
  CLUS_4                    24                          13
D6V6, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  6(3Q28) CNV         68   26
  AMP PEAK  6(3Q28) WILD-TYPE   20   12
        clus
vv       AMP PEAK  6(3Q28) CNV AMP PEAK  6(3Q28) WILD-TYPE
  CLUS_1                    68                          20
  CLUS_2                    26                          12

Clustering(7) Variable = Amp Peak  7(4q12)
D7V1, multiclass
        clus
vv       AMP PEAK  7(4Q12) CNV AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                     5                          37
  CLUS_2                     4                          28
  CLUS_3                     3                          49
D7V2, multiclass
        clus
vv       AMP PEAK  7(4Q12) CNV AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                     3                          50
  CLUS_2                     3                          38
  CLUS_3                     6                          26
D7V3, multiclass
        clus
vv       AMP PEAK  7(4Q12) CNV AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                     2                          48
  CLUS_2                     4                          26
  CLUS_3                     6                          25
D7V4, multiclass
        clus
vv       AMP PEAK  7(4Q12) CNV AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                     3                           8
  CLUS_2                     2                          62
  CLUS_3                     7                          29
D7V5, multiclass
        clus
vv       AMP PEAK  7(4Q12) CNV AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                     2                          31
  CLUS_2                     3                          40
  CLUS_3                     1                          12
  CLUS_4                     6                          31
D7V6, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  7(4Q12) CNV          5    7
  AMP PEAK  7(4Q12) WILD-TYPE   83   31
        clus
vv       AMP PEAK  7(4Q12) CNV AMP PEAK  7(4Q12) WILD-TYPE
  CLUS_1                     5                          83
  CLUS_2                     7                          31

Clustering(8) Variable = Amp Peak  8(6p21.33)
D8V1, multiclass
        clus
vv       AMP PEAK  8(6P21.33) CNV AMP PEAK  8(6P21.33) WILD-TYPE
  CLUS_1                       10                             32
  CLUS_2                       16                             16
  CLUS_3                        9                             43
D8V2, multiclass
        clus
vv       AMP PEAK  8(6P21.33) CNV AMP PEAK  8(6P21.33) WILD-TYPE
  CLUS_1                        8                             45
  CLUS_2                       18                             23
  CLUS_3                        9                             23
D8V3, multiclass
        clus
vv       AMP PEAK  8(6P21.33) CNV AMP PEAK  8(6P21.33) WILD-TYPE
  CLUS_1                        6                             44
  CLUS_2                       13                             17
  CLUS_3                       11                             20
D8V4, multiclass
        clus
vv       AMP PEAK  8(6P21.33) CNV AMP PEAK  8(6P21.33) WILD-TYPE
  CLUS_1                        5                              6
  CLUS_2                       12                             52
  CLUS_3                       13                             23
D8V5, multiclass
        clus
vv       AMP PEAK  8(6P21.33) CNV AMP PEAK  8(6P21.33) WILD-TYPE
  CLUS_1                        6                             27
  CLUS_2                       11                             32
  CLUS_3                        5                              8
  CLUS_4                       13                             24
D8V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  8(6P21.33) CNV         22   13
  AMP PEAK  8(6P21.33) WILD-TYPE   66   25
        clus
vv       AMP PEAK  8(6P21.33) CNV AMP PEAK  8(6P21.33) WILD-TYPE
  CLUS_1                       22                             66
  CLUS_2                       13                             25

Clustering(9) Variable = Amp Peak  9(6q12)
D9V1, multiclass
        clus
vv       AMP PEAK  9(6Q12) CNV AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                     7                          35
  CLUS_2                     9                          23
  CLUS_3                     8                          44
D9V2, multiclass
        clus
vv       AMP PEAK  9(6Q12) CNV AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                     6                          47
  CLUS_2                    11                          30
  CLUS_3                     7                          25
D9V3, multiclass
        clus
vv       AMP PEAK  9(6Q12) CNV AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                     6                          44
  CLUS_2                     7                          23
  CLUS_3                     9                          22
D9V4, multiclass
        clus
vv       AMP PEAK  9(6Q12) CNV AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                     5                           6
  CLUS_2                     7                          57
  CLUS_3                    10                          26
D9V5, multiclass
        clus
vv       AMP PEAK  9(6Q12) CNV AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                     4                          29
  CLUS_2                     8                          35
  CLUS_3                     4                           9
  CLUS_4                     8                          29
D9V6, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  9(6Q12) CNV         14   10
  AMP PEAK  9(6Q12) WILD-TYPE   74   28
        clus
vv       AMP PEAK  9(6Q12) CNV AMP PEAK  9(6Q12) WILD-TYPE
  CLUS_1                    14                          74
  CLUS_2                    10                          28

Clustering(10) Variable = Amp Peak 10(8q24.21)
D10V1, multiclass
        clus
vv       AMP PEAK 10(8Q24.21) CNV AMP PEAK 10(8Q24.21) WILD-TYPE
  CLUS_1                       13                             29
  CLUS_2                       22                             10
  CLUS_3                       18                             34
D10V2, multiclass
        clus
vv       AMP PEAK 10(8Q24.21) CNV AMP PEAK 10(8Q24.21) WILD-TYPE
  CLUS_1                       24                             29
  CLUS_2                       16                             25
  CLUS_3                       13                             19
D10V3, multiclass
        clus
vv       AMP PEAK 10(8Q24.21) CNV AMP PEAK 10(8Q24.21) WILD-TYPE
  CLUS_1                       23                             27
  CLUS_2                       11                             19
  CLUS_3                       15                             16
D10V4, multiclass
        clus
vv       AMP PEAK 10(8Q24.21) CNV AMP PEAK 10(8Q24.21) WILD-TYPE
  CLUS_1                        3                              8
  CLUS_2                       30                             34
  CLUS_3                       16                             20
D10V5, multiclass
        clus
vv       AMP PEAK 10(8Q24.21) CNV AMP PEAK 10(8Q24.21) WILD-TYPE
  CLUS_1                       14                             19
  CLUS_2                       19                             24
  CLUS_3                        3                             10
  CLUS_4                       17                             20
D10V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 10(8Q24.21) CNV         36   17
  AMP PEAK 10(8Q24.21) WILD-TYPE   52   21
        clus
vv       AMP PEAK 10(8Q24.21) CNV AMP PEAK 10(8Q24.21) WILD-TYPE
  CLUS_1                       36                             52
  CLUS_2                       17                             21

Clustering(11) Variable = Amp Peak 11(8q24.21)
D11V1, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) CNV AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                       14                             28
  CLUS_2                       20                             12
  CLUS_3                       14                             38
D11V2, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) CNV AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                       24                             29
  CLUS_2                       15                             26
  CLUS_3                        9                             23
D11V3, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) CNV AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                       22                             28
  CLUS_2                       11                             19
  CLUS_3                       11                             20
D11V4, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) CNV AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                        3                              8
  CLUS_2                       29                             35
  CLUS_3                       12                             24
D11V5, multiclass
        clus
vv       AMP PEAK 11(8Q24.21) CNV AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                       15                             18
  CLUS_2                       17                             26
  CLUS_3                        2                             11
  CLUS_4                       14                             23
D11V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 11(8Q24.21) CNV         35   13
  AMP PEAK 11(8Q24.21) WILD-TYPE   53   25
        clus
vv       AMP PEAK 11(8Q24.21) CNV AMP PEAK 11(8Q24.21) WILD-TYPE
  CLUS_1                       35                             53
  CLUS_2                       13                             25

Clustering(12) Variable = Amp Peak 12(9p24.1)
D12V1, multiclass
        clus
vv       AMP PEAK 12(9P24.1) CNV AMP PEAK 12(9P24.1) WILD-TYPE
  CLUS_1                       8                            34
  CLUS_2                      12                            20
  CLUS_3                       8                            44
D12V2, multiclass
        clus
vv       AMP PEAK 12(9P24.1) CNV AMP PEAK 12(9P24.1) WILD-TYPE
  CLUS_1                      13                            40
  CLUS_2                      10                            31
  CLUS_3                       5                            27
D12V3, multiclass
        clus
vv       AMP PEAK 12(9P24.1) CNV AMP PEAK 12(9P24.1) WILD-TYPE
  CLUS_1                      11                            39
  CLUS_2                       8                            22
  CLUS_3                       6                            25
D12V4, multiclass
        clus
vv       AMP PEAK 12(9P24.1) CNV AMP PEAK 12(9P24.1) WILD-TYPE
  CLUS_1                       3                             8
  CLUS_2                      12                            52
  CLUS_3                      10                            26
D12V5, multiclass
        clus
vv       AMP PEAK 12(9P24.1) CNV AMP PEAK 12(9P24.1) WILD-TYPE
  CLUS_1                       6                            27
  CLUS_2                      12                            31
  CLUS_3                       4                             9
  CLUS_4                       6                            31
D12V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 12(9P24.1) CNV         22    6
  AMP PEAK 12(9P24.1) WILD-TYPE   66   32
        clus
vv       AMP PEAK 12(9P24.1) CNV AMP PEAK 12(9P24.1) WILD-TYPE
  CLUS_1                      22                            66
  CLUS_2                       6                            32

Clustering(13) Variable = Amp Peak 13(11q13.3)
D13V1, multiclass
        clus
vv       AMP PEAK 13(11Q13.3) CNV AMP PEAK 13(11Q13.3) WILD-TYPE
  CLUS_1                        5                             37
  CLUS_2                        9                             23
  CLUS_3                        4                             48
D13V2, multiclass
        clus
vv       AMP PEAK 13(11Q13.3) CNV AMP PEAK 13(11Q13.3) WILD-TYPE
  CLUS_1                        6                             47
  CLUS_2                        7                             34
  CLUS_3                        5                             27
D13V3, multiclass
        clus
vv       AMP PEAK 13(11Q13.3) CNV AMP PEAK 13(11Q13.3) WILD-TYPE
  CLUS_1                        3                             47
  CLUS_2                        9                             21
  CLUS_3                        4                             27
D13V4, multiclass
        clus
vv       AMP PEAK 13(11Q13.3) CNV AMP PEAK 13(11Q13.3) WILD-TYPE
  CLUS_1                        1                             10
  CLUS_2                        5                             59
  CLUS_3                       10                             26
D13V5, multiclass
        clus
vv       AMP PEAK 13(11Q13.3) CNV AMP PEAK 13(11Q13.3) WILD-TYPE
  CLUS_1                        3                             30
  CLUS_2                        8                             35
  CLUS_3                        1                             12
  CLUS_4                        6                             31
D13V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 13(11Q13.3) CNV         12    6
  AMP PEAK 13(11Q13.3) WILD-TYPE   76   32
        clus
vv       AMP PEAK 13(11Q13.3) CNV AMP PEAK 13(11Q13.3) WILD-TYPE
  CLUS_1                       12                             76
  CLUS_2                        6                             32

Clustering(14) Variable = Amp Peak 14(11q22.1)
D14V1, multiclass
        clus
vv       AMP PEAK 14(11Q22.1) CNV AMP PEAK 14(11Q22.1) WILD-TYPE
  CLUS_1                        4                             38
  CLUS_2                       16                             16
  CLUS_3                        7                             45
D14V2, multiclass
        clus
vv       AMP PEAK 14(11Q22.1) CNV AMP PEAK 14(11Q22.1) WILD-TYPE
  CLUS_1                       11                             42
  CLUS_2                       13                             28
  CLUS_3                        3                             29
D14V3, multiclass
        clus
vv       AMP PEAK 14(11Q22.1) CNV AMP PEAK 14(11Q22.1) WILD-TYPE
  CLUS_1                        9                             41
  CLUS_2                       10                             20
  CLUS_3                        3                             28
D14V4, multiclass
        clus
vv       AMP PEAK 14(11Q22.1) CNV AMP PEAK 14(11Q22.1) WILD-TYPE
  CLUS_1                        0                             11
  CLUS_2                       14                             50
  CLUS_3                        8                             28
D14V5, multiclass
        clus
vv       AMP PEAK 14(11Q22.1) CNV AMP PEAK 14(11Q22.1) WILD-TYPE
  CLUS_1                        6                             27
  CLUS_2                       15                             28
  CLUS_3                        1                             12
  CLUS_4                        5                             32
D14V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 14(11Q22.1) CNV         23    4
  AMP PEAK 14(11Q22.1) WILD-TYPE   65   34
        clus
vv       AMP PEAK 14(11Q22.1) CNV AMP PEAK 14(11Q22.1) WILD-TYPE
  CLUS_1                       23                             65
  CLUS_2                        4                             34

Clustering(15) Variable = Amp Peak 15(13q22.1)
D15V1, multiclass
        clus
vv       AMP PEAK 15(13Q22.1) CNV AMP PEAK 15(13Q22.1) WILD-TYPE
  CLUS_1                        3                             39
  CLUS_2                       12                             20
  CLUS_3                       12                             40
D15V2, multiclass
        clus
vv       AMP PEAK 15(13Q22.1) CNV AMP PEAK 15(13Q22.1) WILD-TYPE
  CLUS_1                       12                             41
  CLUS_2                        6                             35
  CLUS_3                        9                             23
D15V3, multiclass
        clus
vv       AMP PEAK 15(13Q22.1) CNV AMP PEAK 15(13Q22.1) WILD-TYPE
  CLUS_1                        7                             43
  CLUS_2                        8                             22
  CLUS_3                        9                             22
D15V4, multiclass
        clus
vv       AMP PEAK 15(13Q22.1) CNV AMP PEAK 15(13Q22.1) WILD-TYPE
  CLUS_1                        0                             11
  CLUS_2                       15                             49
  CLUS_3                        9                             27
D15V5, multiclass
        clus
vv       AMP PEAK 15(13Q22.1) CNV AMP PEAK 15(13Q22.1) WILD-TYPE
  CLUS_1                        3                             30
  CLUS_2                       13                             30
  CLUS_3                        3                             10
  CLUS_4                        8                             29
D15V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 15(13Q22.1) CNV         18    9
  AMP PEAK 15(13Q22.1) WILD-TYPE   70   29
        clus
vv       AMP PEAK 15(13Q22.1) CNV AMP PEAK 15(13Q22.1) WILD-TYPE
  CLUS_1                       18                             70
  CLUS_2                        9                             29

Clustering(16) Variable = Amp Peak 16(14q24.1)
D16V1, multiclass
        clus
vv       AMP PEAK 16(14Q24.1) CNV AMP PEAK 16(14Q24.1) WILD-TYPE
  CLUS_1                       10                             32
  CLUS_2                        5                             27
  CLUS_3                       10                             42
D16V2, multiclass
        clus
vv       AMP PEAK 16(14Q24.1) CNV AMP PEAK 16(14Q24.1) WILD-TYPE
  CLUS_1                        9                             44
  CLUS_2                        9                             32
  CLUS_3                        7                             25
D16V3, multiclass
        clus
vv       AMP PEAK 16(14Q24.1) CNV AMP PEAK 16(14Q24.1) WILD-TYPE
  CLUS_1                        7                             43
  CLUS_2                        8                             22
  CLUS_3                        8                             23
D16V4, multiclass
        clus
vv       AMP PEAK 16(14Q24.1) CNV AMP PEAK 16(14Q24.1) WILD-TYPE
  CLUS_1                        3                              8
  CLUS_2                        9                             55
  CLUS_3                       11                             25
D16V5, multiclass
        clus
vv       AMP PEAK 16(14Q24.1) CNV AMP PEAK 16(14Q24.1) WILD-TYPE
  CLUS_1                        5                             28
  CLUS_2                       11                             32
  CLUS_3                        2                             11
  CLUS_4                        7                             30
D16V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 16(14Q24.1) CNV         18    7
  AMP PEAK 16(14Q24.1) WILD-TYPE   70   31
        clus
vv       AMP PEAK 16(14Q24.1) CNV AMP PEAK 16(14Q24.1) WILD-TYPE
  CLUS_1                       18                             70
  CLUS_2                        7                             31

Clustering(17) Variable = Amp Peak 17(15q26.3)
D17V1, multiclass
        clus
vv       AMP PEAK 17(15Q26.3) CNV AMP PEAK 17(15Q26.3) WILD-TYPE
  CLUS_1                       17                             25
  CLUS_2                        3                             29
  CLUS_3                       10                             42
D17V2, multiclass
        clus
vv       AMP PEAK 17(15Q26.3) CNV AMP PEAK 17(15Q26.3) WILD-TYPE
  CLUS_1                       15                             38
  CLUS_2                        7                             34
  CLUS_3                        8                             24
D17V3, multiclass
        clus
vv       AMP PEAK 17(15Q26.3) CNV AMP PEAK 17(15Q26.3) WILD-TYPE
  CLUS_1                       14                             36
  CLUS_2                        4                             26
  CLUS_3                        8                             23
D17V4, multiclass
        clus
vv       AMP PEAK 17(15Q26.3) CNV AMP PEAK 17(15Q26.3) WILD-TYPE
  CLUS_1                        1                             10
  CLUS_2                       15                             49
  CLUS_3                       10                             26
D17V5, multiclass
        clus
vv       AMP PEAK 17(15Q26.3) CNV AMP PEAK 17(15Q26.3) WILD-TYPE
  CLUS_1                       11                             22
  CLUS_2                        7                             36
  CLUS_3                        4                              9
  CLUS_4                        8                             29
D17V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 17(15Q26.3) CNV         22    8
  AMP PEAK 17(15Q26.3) WILD-TYPE   66   30
        clus
vv       AMP PEAK 17(15Q26.3) CNV AMP PEAK 17(15Q26.3) WILD-TYPE
  CLUS_1                       22                             66
  CLUS_2                        8                             30

Clustering(18) Variable = Amp Peak 18(16p13.2)
D18V1, multiclass
        clus
vv       AMP PEAK 18(16P13.2) CNV AMP PEAK 18(16P13.2) WILD-TYPE
  CLUS_1                       14                             28
  CLUS_2                        4                             28
  CLUS_3                        9                             43
D18V2, multiclass
        clus
vv       AMP PEAK 18(16P13.2) CNV AMP PEAK 18(16P13.2) WILD-TYPE
  CLUS_1                       14                             39
  CLUS_2                        5                             36
  CLUS_3                        8                             24
D18V3, multiclass
        clus
vv       AMP PEAK 18(16P13.2) CNV AMP PEAK 18(16P13.2) WILD-TYPE
  CLUS_1                       11                             39
  CLUS_2                        5                             25
  CLUS_3                        7                             24
D18V4, multiclass
        clus
vv       AMP PEAK 18(16P13.2) CNV AMP PEAK 18(16P13.2) WILD-TYPE
  CLUS_1                        3                              8
  CLUS_2                       12                             52
  CLUS_3                        8                             28
D18V5, multiclass
        clus
vv       AMP PEAK 18(16P13.2) CNV AMP PEAK 18(16P13.2) WILD-TYPE
  CLUS_1                        7                             26
  CLUS_2                       11                             32
  CLUS_3                        2                             11
  CLUS_4                        7                             30
D18V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 18(16P13.2) CNV         18    9
  AMP PEAK 18(16P13.2) WILD-TYPE   70   29
        clus
vv       AMP PEAK 18(16P13.2) CNV AMP PEAK 18(16P13.2) WILD-TYPE
  CLUS_1                       18                             70
  CLUS_2                        9                             29

Clustering(19) Variable = Amp Peak 19(16p13.13)
D19V1, multiclass
        clus
vv       AMP PEAK 19(16P13.13) CNV AMP PEAK 19(16P13.13) WILD-TYPE
  CLUS_1                        15                              27
  CLUS_2                         4                              28
  CLUS_3                        11                              41
D19V2, multiclass
        clus
vv       AMP PEAK 19(16P13.13) CNV AMP PEAK 19(16P13.13) WILD-TYPE
  CLUS_1                        13                              40
  CLUS_2                         6                              35
  CLUS_3                        11                              21
D19V3, multiclass
        clus
vv       AMP PEAK 19(16P13.13) CNV AMP PEAK 19(16P13.13) WILD-TYPE
  CLUS_1                        10                              40
  CLUS_2                         6                              24
  CLUS_3                         9                              22
D19V4, multiclass
        clus
vv       AMP PEAK 19(16P13.13) CNV AMP PEAK 19(16P13.13) WILD-TYPE
  CLUS_1                         4                               7
  CLUS_2                        11                              53
  CLUS_3                        10                              26
D19V5, multiclass
        clus
vv       AMP PEAK 19(16P13.13) CNV AMP PEAK 19(16P13.13) WILD-TYPE
  CLUS_1                         7                              26
  CLUS_2                        10                              33
  CLUS_3                         4                               9
  CLUS_4                         9                              28
D19V6, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 19(16P13.13) CNV         18   12
  AMP PEAK 19(16P13.13) WILD-TYPE   70   26
        clus
vv       AMP PEAK 19(16P13.13) CNV AMP PEAK 19(16P13.13) WILD-TYPE
  CLUS_1                        18                              70
  CLUS_2                        12                              26

Clustering(20) Variable = Amp Peak 20(17q12)
D20V1, multiclass
        clus
vv       AMP PEAK 20(17Q12) CNV AMP PEAK 20(17Q12) WILD-TYPE
  CLUS_1                      9                           33
  CLUS_2                      8                           24
  CLUS_3                      4                           48
D20V2, multiclass
        clus
vv       AMP PEAK 20(17Q12) CNV AMP PEAK 20(17Q12) WILD-TYPE
  CLUS_1                      7                           46
  CLUS_2                      4                           37
  CLUS_3                     10                           22
D20V3, multiclass
        clus
vv       AMP PEAK 20(17Q12) CNV AMP PEAK 20(17Q12) WILD-TYPE
  CLUS_1                      5                           45
  CLUS_2                      2                           28
  CLUS_3                     10                           21
D20V4, multiclass
        clus
vv       AMP PEAK 20(17Q12) CNV AMP PEAK 20(17Q12) WILD-TYPE
  CLUS_1                      2                            9
  CLUS_2                      6                           58
  CLUS_3                      9                           27
D20V5, multiclass
        clus
vv       AMP PEAK 20(17Q12) CNV AMP PEAK 20(17Q12) WILD-TYPE
  CLUS_1                      4                           29
  CLUS_2                      5                           38
  CLUS_3                      3                           10
  CLUS_4                      9                           28
D20V6, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 20(17Q12) CNV         10   11
  AMP PEAK 20(17Q12) WILD-TYPE   78   27
        clus
vv       AMP PEAK 20(17Q12) CNV AMP PEAK 20(17Q12) WILD-TYPE
  CLUS_1                     10                           78
  CLUS_2                     11                           27

Clustering(21) Variable = Amp Peak 21(17q25.1)
D21V1, multiclass
        clus
vv       AMP PEAK 21(17Q25.1) CNV AMP PEAK 21(17Q25.1) WILD-TYPE
  CLUS_1                       16                             26
  CLUS_2                       11                             21
  CLUS_3                        7                             45
D21V2, multiclass
        clus
vv       AMP PEAK 21(17Q25.1) CNV AMP PEAK 21(17Q25.1) WILD-TYPE
  CLUS_1                       15                             38
  CLUS_2                        6                             35
  CLUS_3                       13                             19
D21V3, multiclass
        clus
vv       AMP PEAK 21(17Q25.1) CNV AMP PEAK 21(17Q25.1) WILD-TYPE
  CLUS_1                       12                             38
  CLUS_2                        4                             26
  CLUS_3                       13                             18
D21V4, multiclass
        clus
vv       AMP PEAK 21(17Q25.1) CNV AMP PEAK 21(17Q25.1) WILD-TYPE
  CLUS_1                        4                              7
  CLUS_2                       14                             50
  CLUS_3                       11                             25
D21V5, multiclass
        clus
vv       AMP PEAK 21(17Q25.1) CNV AMP PEAK 21(17Q25.1) WILD-TYPE
  CLUS_1                       11                             22
  CLUS_2                        9                             34
  CLUS_3                        3                             10
  CLUS_4                       11                             26
D21V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 21(17Q25.1) CNV         21   13
  AMP PEAK 21(17Q25.1) WILD-TYPE   67   25
        clus
vv       AMP PEAK 21(17Q25.1) CNV AMP PEAK 21(17Q25.1) WILD-TYPE
  CLUS_1                       21                             67
  CLUS_2                       13                             25

Clustering(22) Variable = Amp Peak 22(19q13.31)
D22V1, multiclass
        clus
vv       AMP PEAK 22(19Q13.31) CNV AMP PEAK 22(19Q13.31) WILD-TYPE
  CLUS_1                        15                              27
  CLUS_2                        17                              15
  CLUS_3                        11                              41
D22V2, multiclass
        clus
vv       AMP PEAK 22(19Q13.31) CNV AMP PEAK 22(19Q13.31) WILD-TYPE
  CLUS_1                        16                              37
  CLUS_2                        16                              25
  CLUS_3                        11                              21
D22V3, multiclass
        clus
vv       AMP PEAK 22(19Q13.31) CNV AMP PEAK 22(19Q13.31) WILD-TYPE
  CLUS_1                        14                              36
  CLUS_2                        11                              19
  CLUS_3                        14                              17
D22V4, multiclass
        clus
vv       AMP PEAK 22(19Q13.31) CNV AMP PEAK 22(19Q13.31) WILD-TYPE
  CLUS_1                         2                               9
  CLUS_2                        20                              44
  CLUS_3                        17                              19
D22V5, multiclass
        clus
vv       AMP PEAK 22(19Q13.31) CNV AMP PEAK 22(19Q13.31) WILD-TYPE
  CLUS_1                        11                              22
  CLUS_2                        13                              30
  CLUS_3                         4                               9
  CLUS_4                        15                              22
D22V6, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 22(19Q13.31) CNV         29   14
  AMP PEAK 22(19Q13.31) WILD-TYPE   59   24
        clus
vv       AMP PEAK 22(19Q13.31) CNV AMP PEAK 22(19Q13.31) WILD-TYPE
  CLUS_1                        29                              59
  CLUS_2                        14                              24

Clustering(23) Variable = Amp Peak 23(20q11.21)
D23V1, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) CNV AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                        29                              13
  CLUS_2                        16                              16
  CLUS_3                        16                              36
D23V2, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) CNV AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                        24                              29
  CLUS_2                        18                              23
  CLUS_3                        19                              13
D23V3, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) CNV AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                        22                              28
  CLUS_2                        13                              17
  CLUS_3                        19                              12
D23V4, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) CNV AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                         7                               4
  CLUS_2                        27                              37
  CLUS_3                        20                              16
D23V5, multiclass
        clus
vv       AMP PEAK 23(20Q11.21) CNV AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                        20                              13
  CLUS_2                        18                              25
  CLUS_3                         6                               7
  CLUS_4                        17                              20
D23V6, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 23(20Q11.21) CNV         41   20
  AMP PEAK 23(20Q11.21) WILD-TYPE   47   18
        clus
vv       AMP PEAK 23(20Q11.21) CNV AMP PEAK 23(20Q11.21) WILD-TYPE
  CLUS_1                        41                              47
  CLUS_2                        20                              18

Clustering(24) Variable = Amp Peak 24(Xq28)
D24V1, multiclass
        clus
vv       AMP PEAK 24(XQ28) CNV AMP PEAK 24(XQ28) WILD-TYPE
  CLUS_1                    13                          29
  CLUS_2                    10                          22
  CLUS_3                    13                          39
D24V2, multiclass
        clus
vv       AMP PEAK 24(XQ28) CNV AMP PEAK 24(XQ28) WILD-TYPE
  CLUS_1                    20                          33
  CLUS_2                     8                          33
  CLUS_3                     8                          24
D24V3, multiclass
        clus
vv       AMP PEAK 24(XQ28) CNV AMP PEAK 24(XQ28) WILD-TYPE
  CLUS_1                    15                          35
  CLUS_2                    11                          19
  CLUS_3                     8                          23
D24V4, multiclass
        clus
vv       AMP PEAK 24(XQ28) CNV AMP PEAK 24(XQ28) WILD-TYPE
  CLUS_1                     4                           7
  CLUS_2                    19                          45
  CLUS_3                    11                          25
D24V5, multiclass
        clus
vv       AMP PEAK 24(XQ28) CNV AMP PEAK 24(XQ28) WILD-TYPE
  CLUS_1                     8                          25
  CLUS_2                    19                          24
  CLUS_3                     1                          12
  CLUS_4                     8                          29
D24V6, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 24(XQ28) CNV         27    9
  AMP PEAK 24(XQ28) WILD-TYPE   61   29
        clus
vv       AMP PEAK 24(XQ28) CNV AMP PEAK 24(XQ28) WILD-TYPE
  CLUS_1                    27                          61
  CLUS_2                     9                          29

Clustering(25) Variable = Del Peak  1(1p36.23)
D25V1, multiclass
        clus
vv       DEL PEAK  1(1P36.23) CNV DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                        6                             36
  CLUS_2                        9                             23
  CLUS_3                        5                             47
D25V2, multiclass
        clus
vv       DEL PEAK  1(1P36.23) CNV DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                        6                             47
  CLUS_2                        4                             37
  CLUS_3                       10                             22
D25V3, multiclass
        clus
vv       DEL PEAK  1(1P36.23) CNV DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                        2                             48
  CLUS_2                        7                             23
  CLUS_3                       10                             21
D25V4, multiclass
        clus
vv       DEL PEAK  1(1P36.23) CNV DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                        3                              8
  CLUS_2                        4                             60
  CLUS_3                       12                             24
D25V5, multiclass
        clus
vv       DEL PEAK  1(1P36.23) CNV DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                        2                             31
  CLUS_2                        6                             37
  CLUS_3                        2                             11
  CLUS_4                       10                             27
D25V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  1(1P36.23) CNV          9   11
  DEL PEAK  1(1P36.23) WILD-TYPE   79   27
        clus
vv       DEL PEAK  1(1P36.23) CNV DEL PEAK  1(1P36.23) WILD-TYPE
  CLUS_1                        9                             79
  CLUS_2                       11                             27

Clustering(26) Variable = Del Peak  2(1p13.1)
D26V1, multiclass
        clus
vv       DEL PEAK  2(1P13.1) CNV DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                       5                            37
  CLUS_2                       2                            30
  CLUS_3                       5                            47
D26V2, multiclass
        clus
vv       DEL PEAK  2(1P13.1) CNV DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                       6                            47
  CLUS_2                       5                            36
  CLUS_3                       1                            31
D26V3, multiclass
        clus
vv       DEL PEAK  2(1P13.1) CNV DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                       5                            45
  CLUS_2                       3                            27
  CLUS_3                       3                            28
D26V4, multiclass
        clus
vv       DEL PEAK  2(1P13.1) CNV DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                       1                            10
  CLUS_2                       7                            57
  CLUS_3                       3                            33
D26V5, multiclass
        clus
vv       DEL PEAK  2(1P13.1) CNV DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                       5                            28
  CLUS_2                       3                            40
  CLUS_3                       2                            11
  CLUS_4                       2                            35
D26V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  2(1P13.1) CNV         10    2
  DEL PEAK  2(1P13.1) WILD-TYPE   78   36
        clus
vv       DEL PEAK  2(1P13.1) CNV DEL PEAK  2(1P13.1) WILD-TYPE
  CLUS_1                      10                            78
  CLUS_2                       2                            36

Clustering(27) Variable = Del Peak  3(2q22.1)
D27V1, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                       4                            38
  CLUS_2                      10                            22
  CLUS_3                       8                            44
D27V2, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                      11                            42
  CLUS_2                       7                            34
  CLUS_3                       4                            28
D27V3, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                      10                            40
  CLUS_2                       6                            24
  CLUS_3                       5                            26
D27V4, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                       1                            10
  CLUS_2                      13                            51
  CLUS_3                       7                            29
D27V5, multiclass
        clus
vv       DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                       3                            30
  CLUS_2                      10                            33
  CLUS_3                       3                            10
  CLUS_4                       6                            31
D27V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(2Q22.1) CNV         16    6
  DEL PEAK  3(2Q22.1) WILD-TYPE   72   32
        clus
vv       DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  CLUS_1                      16                            72
  CLUS_2                       6                            32

Clustering(28) Variable = Del Peak  4(2q37.1)
D28V1, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) CNV DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                      13                            29
  CLUS_2                      21                            11
  CLUS_3                      17                            35
D28V2, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) CNV DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                      26                            27
  CLUS_2                      18                            23
  CLUS_3                       7                            25
D28V3, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) CNV DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                      23                            27
  CLUS_2                      15                            15
  CLUS_3                       9                            22
D28V4, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) CNV DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                       4                             7
  CLUS_2                      31                            33
  CLUS_3                      12                            24
D28V5, multiclass
        clus
vv       DEL PEAK  4(2Q37.1) CNV DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                      13                            20
  CLUS_2                      23                            20
  CLUS_3                       4                             9
  CLUS_4                      11                            26
D28V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  4(2Q37.1) CNV         43    8
  DEL PEAK  4(2Q37.1) WILD-TYPE   45   30
        clus
vv       DEL PEAK  4(2Q37.1) CNV DEL PEAK  4(2Q37.1) WILD-TYPE
  CLUS_1                      43                            45
  CLUS_2                       8                            30

Clustering(29) Variable = Del Peak  5(3p11.1)
D29V1, multiclass
        clus
vv       DEL PEAK  5(3P11.1) CNV DEL PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                      15                            27
  CLUS_2                      22                            10
  CLUS_3                      14                            38
D29V2, multiclass
        clus
vv       DEL PEAK  5(3P11.1) CNV DEL PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                      27                            26
  CLUS_2                      17                            24
  CLUS_3                       7                            25
D29V3, multiclass
        clus
vv       DEL PEAK  5(3P11.1) CNV DEL PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                      24                            26
  CLUS_2                      13                            17
  CLUS_3                      10                            21
D29V4, multiclass
        clus
vv       DEL PEAK  5(3P11.1) CNV DEL PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                       2                             9
  CLUS_2                      36                            28
  CLUS_3                       9                            27
D29V5, multiclass
        clus
vv       DEL PEAK  5(3P11.1) CNV DEL PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                      15                            18
  CLUS_2                      23                            20
  CLUS_3                       2                            11
  CLUS_4                      11                            26
D29V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  5(3P11.1) CNV         42    9
  DEL PEAK  5(3P11.1) WILD-TYPE   46   29
        clus
vv       DEL PEAK  5(3P11.1) CNV DEL PEAK  5(3P11.1) WILD-TYPE
  CLUS_1                      42                            46
  CLUS_2                       9                            29

Clustering(30) Variable = Del Peak  6(4q22.1)
D30V1, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) CNV DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                      12                            30
  CLUS_2                      21                            11
  CLUS_3                       6                            46
D30V2, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) CNV DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                      15                            38
  CLUS_2                      18                            23
  CLUS_3                       6                            26
D30V3, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) CNV DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                      11                            39
  CLUS_2                      14                            16
  CLUS_3                       9                            22
D30V4, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) CNV DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                       4                             7
  CLUS_2                      17                            47
  CLUS_3                      13                            23
D30V5, multiclass
        clus
vv       DEL PEAK  6(4Q22.1) CNV DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                      10                            23
  CLUS_2                      16                            27
  CLUS_3                       3                            10
  CLUS_4                      10                            27
D30V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  6(4Q22.1) CNV         29   10
  DEL PEAK  6(4Q22.1) WILD-TYPE   59   28
        clus
vv       DEL PEAK  6(4Q22.1) CNV DEL PEAK  6(4Q22.1) WILD-TYPE
  CLUS_1                      29                            59
  CLUS_2                      10                            28

Clustering(31) Variable = Del Peak  7(4q35.2)
D31V1, multiclass
        clus
vv       DEL PEAK  7(4Q35.2) CNV DEL PEAK  7(4Q35.2) WILD-TYPE
  CLUS_1                      13                            29
  CLUS_2                      23                             9
  CLUS_3                      11                            41
D31V2, multiclass
        clus
vv       DEL PEAK  7(4Q35.2) CNV DEL PEAK  7(4Q35.2) WILD-TYPE
  CLUS_1                      16                            37
  CLUS_2                      22                            19
  CLUS_3                       9                            23
D31V3, multiclass
        clus
vv       DEL PEAK  7(4Q35.2) CNV DEL PEAK  7(4Q35.2) WILD-TYPE
  CLUS_1                      13                            37
  CLUS_2                      16                            14
  CLUS_3                      12                            19
D31V4, multiclass
        clus
vv       DEL PEAK  7(4Q35.2) CNV DEL PEAK  7(4Q35.2) WILD-TYPE
  CLUS_1                       6                             5
  CLUS_2                      19                            45
  CLUS_3                      16                            20
D31V5, multiclass
        clus
vv       DEL PEAK  7(4Q35.2) CNV DEL PEAK  7(4Q35.2) WILD-TYPE
  CLUS_1                      10                            23
  CLUS_2                      19                            24
  CLUS_3                       5                             8
  CLUS_4                      13                            24
D31V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  7(4Q35.2) CNV         35   12
  DEL PEAK  7(4Q35.2) WILD-TYPE   53   26
        clus
vv       DEL PEAK  7(4Q35.2) CNV DEL PEAK  7(4Q35.2) WILD-TYPE
  CLUS_1                      35                            53
  CLUS_2                      12                            26

Clustering(32) Variable = Del Peak  8(5q14.3)
D32V1, multiclass
        clus
vv       DEL PEAK  8(5Q14.3) CNV DEL PEAK  8(5Q14.3) WILD-TYPE
  CLUS_1                      11                            31
  CLUS_2                      15                            17
  CLUS_3                      10                            42
D32V2, multiclass
        clus
vv       DEL PEAK  8(5Q14.3) CNV DEL PEAK  8(5Q14.3) WILD-TYPE
  CLUS_1                      18                            35
  CLUS_2                      13                            28
  CLUS_3                       5                            27
D32V3, multiclass
        clus
vv       DEL PEAK  8(5Q14.3) CNV DEL PEAK  8(5Q14.3) WILD-TYPE
  CLUS_1                      18                            32
  CLUS_2                       9                            21
  CLUS_3                       8                            23
D32V4, multiclass
        clus
vv       DEL PEAK  8(5Q14.3) CNV DEL PEAK  8(5Q14.3) WILD-TYPE
  CLUS_1                       2                             9
  CLUS_2                      25                            39
  CLUS_3                       8                            28
D32V5, multiclass
        clus
vv       DEL PEAK  8(5Q14.3) CNV DEL PEAK  8(5Q14.3) WILD-TYPE
  CLUS_1                      13                            20
  CLUS_2                      13                            30
  CLUS_3                       1                            12
  CLUS_4                       9                            28
D32V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  8(5Q14.3) CNV         29    7
  DEL PEAK  8(5Q14.3) WILD-TYPE   59   31
        clus
vv       DEL PEAK  8(5Q14.3) CNV DEL PEAK  8(5Q14.3) WILD-TYPE
  CLUS_1                      29                            59
  CLUS_2                       7                            31

Clustering(33) Variable = Del Peak  9(6p24.3)
D33V1, multiclass
        clus
vv       DEL PEAK  9(6P24.3) CNV DEL PEAK  9(6P24.3) WILD-TYPE
  CLUS_1                       6                            36
  CLUS_2                       3                            29
  CLUS_3                       9                            43
D33V2, multiclass
        clus
vv       DEL PEAK  9(6P24.3) CNV DEL PEAK  9(6P24.3) WILD-TYPE
  CLUS_1                      11                            42
  CLUS_2                       3                            38
  CLUS_3                       4                            28
D33V3, multiclass
        clus
vv       DEL PEAK  9(6P24.3) CNV DEL PEAK  9(6P24.3) WILD-TYPE
  CLUS_1                      10                            40
  CLUS_2                       2                            28
  CLUS_3                       4                            27
D33V4, multiclass
        clus
vv       DEL PEAK  9(6P24.3) CNV DEL PEAK  9(6P24.3) WILD-TYPE
  CLUS_1                       2                             9
  CLUS_2                      12                            52
  CLUS_3                       2                            34
D33V5, multiclass
        clus
vv       DEL PEAK  9(6P24.3) CNV DEL PEAK  9(6P24.3) WILD-TYPE
  CLUS_1                       6                            27
  CLUS_2                       7                            36
  CLUS_3                       1                            12
  CLUS_4                       4                            33
D33V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  9(6P24.3) CNV         13    5
  DEL PEAK  9(6P24.3) WILD-TYPE   75   33
        clus
vv       DEL PEAK  9(6P24.3) CNV DEL PEAK  9(6P24.3) WILD-TYPE
  CLUS_1                      13                            75
  CLUS_2                       5                            33

Clustering(34) Variable = Del Peak 10(6p12.1)
D34V1, multiclass
        clus
vv       DEL PEAK 10(6P12.1) CNV DEL PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                       5                            37
  CLUS_2                       6                            26
  CLUS_3                       9                            43
D34V2, multiclass
        clus
vv       DEL PEAK 10(6P12.1) CNV DEL PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                      11                            42
  CLUS_2                       5                            36
  CLUS_3                       4                            28
D34V3, multiclass
        clus
vv       DEL PEAK 10(6P12.1) CNV DEL PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                      10                            40
  CLUS_2                       4                            26
  CLUS_3                       3                            28
D34V4, multiclass
        clus
vv       DEL PEAK 10(6P12.1) CNV DEL PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                       2                             9
  CLUS_2                      13                            51
  CLUS_3                       2                            34
D34V5, multiclass
        clus
vv       DEL PEAK 10(6P12.1) CNV DEL PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                       4                            29
  CLUS_2                      10                            33
  CLUS_3                       1                            12
  CLUS_4                       5                            32
D34V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(6P12.1) CNV         15    5
  DEL PEAK 10(6P12.1) WILD-TYPE   73   33
        clus
vv       DEL PEAK 10(6P12.1) CNV DEL PEAK 10(6P12.1) WILD-TYPE
  CLUS_1                      15                            73
  CLUS_2                       5                            33

Clustering(35) Variable = Del Peak 11(6q26)
D35V1, multiclass
        clus
vv       DEL PEAK 11(6Q26) CNV DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                    14                          28
  CLUS_2                    17                          15
  CLUS_3                    17                          35
D35V2, multiclass
        clus
vv       DEL PEAK 11(6Q26) CNV DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                    23                          30
  CLUS_2                    12                          29
  CLUS_3                    13                          19
D35V3, multiclass
        clus
vv       DEL PEAK 11(6Q26) CNV DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                    21                          29
  CLUS_2                     8                          22
  CLUS_3                    13                          18
D35V4, multiclass
        clus
vv       DEL PEAK 11(6Q26) CNV DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                     3                           8
  CLUS_2                    26                          38
  CLUS_3                    13                          23
D35V5, multiclass
        clus
vv       DEL PEAK 11(6Q26) CNV DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                    12                          21
  CLUS_2                    18                          25
  CLUS_3                     5                           8
  CLUS_4                    13                          24
D35V6, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 11(6Q26) CNV         34   14
  DEL PEAK 11(6Q26) WILD-TYPE   54   24
        clus
vv       DEL PEAK 11(6Q26) CNV DEL PEAK 11(6Q26) WILD-TYPE
  CLUS_1                    34                          54
  CLUS_2                    14                          24

Clustering(36) Variable = Del Peak 12(7q34)
D36V1, multiclass
        clus
vv       DEL PEAK 12(7Q34) CNV DEL PEAK 12(7Q34) WILD-TYPE
  CLUS_1                     7                          35
  CLUS_2                    14                          18
  CLUS_3                     7                          45
D36V2, multiclass
        clus
vv       DEL PEAK 12(7Q34) CNV DEL PEAK 12(7Q34) WILD-TYPE
  CLUS_1                    13                          40
  CLUS_2                     8                          33
  CLUS_3                     7                          25
D36V3, multiclass
        clus
vv       DEL PEAK 12(7Q34) CNV DEL PEAK 12(7Q34) WILD-TYPE
  CLUS_1                     8                          42
  CLUS_2                    11                          19
  CLUS_3                     7                          24
D36V4, multiclass
        clus
vv       DEL PEAK 12(7Q34) CNV DEL PEAK 12(7Q34) WILD-TYPE
  CLUS_1                     3                           8
  CLUS_2                    13                          51
  CLUS_3                    10                          26
D36V5, multiclass
        clus
vv       DEL PEAK 12(7Q34) CNV DEL PEAK 12(7Q34) WILD-TYPE
  CLUS_1                     4                          29
  CLUS_2                    14                          29
  CLUS_3                     2                          11
  CLUS_4                     8                          29
D36V6, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 12(7Q34) CNV         21    7
  DEL PEAK 12(7Q34) WILD-TYPE   67   31
        clus
vv       DEL PEAK 12(7Q34) CNV DEL PEAK 12(7Q34) WILD-TYPE
  CLUS_1                    21                          67
  CLUS_2                     7                          31

Clustering(37) Variable = Del Peak 13(10q23.31)
D37V1, multiclass
        clus
vv       DEL PEAK 13(10Q23.31) CNV DEL PEAK 13(10Q23.31) WILD-TYPE
  CLUS_1                        12                              30
  CLUS_2                        16                              16
  CLUS_3                        11                              41
D37V2, multiclass
        clus
vv       DEL PEAK 13(10Q23.31) CNV DEL PEAK 13(10Q23.31) WILD-TYPE
  CLUS_1                        15                              38
  CLUS_2                        15                              26
  CLUS_3                         9                              23
D37V3, multiclass
        clus
vv       DEL PEAK 13(10Q23.31) CNV DEL PEAK 13(10Q23.31) WILD-TYPE
  CLUS_1                        13                              37
  CLUS_2                        13                              17
  CLUS_3                        10                              21
D37V4, multiclass
        clus
vv       DEL PEAK 13(10Q23.31) CNV DEL PEAK 13(10Q23.31) WILD-TYPE
  CLUS_1                         7                               4
  CLUS_2                        15                              49
  CLUS_3                        14                              22
D37V5, multiclass
        clus
vv       DEL PEAK 13(10Q23.31) CNV DEL PEAK 13(10Q23.31) WILD-TYPE
  CLUS_1                        10                              23
  CLUS_2                        13                              30
  CLUS_3                         5                               8
  CLUS_4                        11                              26
D37V6, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 13(10Q23.31) CNV         27   12
  DEL PEAK 13(10Q23.31) WILD-TYPE   61   26
        clus
vv       DEL PEAK 13(10Q23.31) CNV DEL PEAK 13(10Q23.31) WILD-TYPE
  CLUS_1                        27                              61
  CLUS_2                        12                              26

Clustering(38) Variable = Del Peak 14(10q26.3)
D38V1, multiclass
        clus
vv       DEL PEAK 14(10Q26.3) CNV DEL PEAK 14(10Q26.3) WILD-TYPE
  CLUS_1                       11                             31
  CLUS_2                       19                             13
  CLUS_3                        8                             44
D38V2, multiclass
        clus
vv       DEL PEAK 14(10Q26.3) CNV DEL PEAK 14(10Q26.3) WILD-TYPE
  CLUS_1                       18                             35
  CLUS_2                       13                             28
  CLUS_3                        7                             25
D38V3, multiclass
        clus
vv       DEL PEAK 14(10Q26.3) CNV DEL PEAK 14(10Q26.3) WILD-TYPE
  CLUS_1                       14                             36
  CLUS_2                       12                             18
  CLUS_3                        8                             23
D38V4, multiclass
        clus
vv       DEL PEAK 14(10Q26.3) CNV DEL PEAK 14(10Q26.3) WILD-TYPE
  CLUS_1                        5                              6
  CLUS_2                       17                             47
  CLUS_3                       12                             24
D38V5, multiclass
        clus
vv       DEL PEAK 14(10Q26.3) CNV DEL PEAK 14(10Q26.3) WILD-TYPE
  CLUS_1                        9                             24
  CLUS_2                       15                             28
  CLUS_3                        3                             10
  CLUS_4                       11                             26
D38V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 14(10Q26.3) CNV         27   11
  DEL PEAK 14(10Q26.3) WILD-TYPE   61   27
        clus
vv       DEL PEAK 14(10Q26.3) CNV DEL PEAK 14(10Q26.3) WILD-TYPE
  CLUS_1                       27                             61
  CLUS_2                       11                             27

Clustering(39) Variable = Del Peak 15(11p15.1)
D39V1, multiclass
        clus
vv       DEL PEAK 15(11P15.1) CNV DEL PEAK 15(11P15.1) WILD-TYPE
  CLUS_1                       14                             28
  CLUS_2                       13                             19
  CLUS_3                       13                             39
D39V2, multiclass
        clus
vv       DEL PEAK 15(11P15.1) CNV DEL PEAK 15(11P15.1) WILD-TYPE
  CLUS_1                       22                             31
  CLUS_2                       12                             29
  CLUS_3                        6                             26
D39V3, multiclass
        clus
vv       DEL PEAK 15(11P15.1) CNV DEL PEAK 15(11P15.1) WILD-TYPE
  CLUS_1                       21                             29
  CLUS_2                        7                             23
  CLUS_3                        8                             23
D39V4, multiclass
        clus
vv       DEL PEAK 15(11P15.1) CNV DEL PEAK 15(11P15.1) WILD-TYPE
  CLUS_1                        1                             10
  CLUS_2                       26                             38
  CLUS_3                        9                             27
D39V5, multiclass
        clus
vv       DEL PEAK 15(11P15.1) CNV DEL PEAK 15(11P15.1) WILD-TYPE
  CLUS_1                       12                             21
  CLUS_2                       16                             27
  CLUS_3                        4                              9
  CLUS_4                        8                             29
D39V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 15(11P15.1) CNV         31    9
  DEL PEAK 15(11P15.1) WILD-TYPE   57   29
        clus
vv       DEL PEAK 15(11P15.1) CNV DEL PEAK 15(11P15.1) WILD-TYPE
  CLUS_1                       31                             57
  CLUS_2                        9                             29

Clustering(40) Variable = Del Peak 16(11q25)
D40V1, multiclass
        clus
vv       DEL PEAK 16(11Q25) CNV DEL PEAK 16(11Q25) WILD-TYPE
  CLUS_1                     31                           11
  CLUS_2                     22                           10
  CLUS_3                     21                           31
D40V2, multiclass
        clus
vv       DEL PEAK 16(11Q25) CNV DEL PEAK 16(11Q25) WILD-TYPE
  CLUS_1                     36                           17
  CLUS_2                     23                           18
  CLUS_3                     15                           17
D40V3, multiclass
        clus
vv       DEL PEAK 16(11Q25) CNV DEL PEAK 16(11Q25) WILD-TYPE
  CLUS_1                     34                           16
  CLUS_2                     17                           13
  CLUS_3                     14                           17
D40V4, multiclass
        clus
vv       DEL PEAK 16(11Q25) CNV DEL PEAK 16(11Q25) WILD-TYPE
  CLUS_1                      8                            3
  CLUS_2                     41                           23
  CLUS_3                     16                           20
D40V5, multiclass
        clus
vv       DEL PEAK 16(11Q25) CNV DEL PEAK 16(11Q25) WILD-TYPE
  CLUS_1                     22                           11
  CLUS_2                     28                           15
  CLUS_3                      5                            8
  CLUS_4                     19                           18
D40V6, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 16(11Q25) CNV         55   19
  DEL PEAK 16(11Q25) WILD-TYPE   33   19
        clus
vv       DEL PEAK 16(11Q25) CNV DEL PEAK 16(11Q25) WILD-TYPE
  CLUS_1                     55                           33
  CLUS_2                     19                           19

Clustering(41) Variable = Del Peak 17(13q13.3)
D41V1, multiclass
        clus
vv       DEL PEAK 17(13Q13.3) CNV DEL PEAK 17(13Q13.3) WILD-TYPE
  CLUS_1                       16                             26
  CLUS_2                       18                             14
  CLUS_3                       18                             34
D41V2, multiclass
        clus
vv       DEL PEAK 17(13Q13.3) CNV DEL PEAK 17(13Q13.3) WILD-TYPE
  CLUS_1                       24                             29
  CLUS_2                       20                             21
  CLUS_3                        8                             24
D41V3, multiclass
        clus
vv       DEL PEAK 17(13Q13.3) CNV DEL PEAK 17(13Q13.3) WILD-TYPE
  CLUS_1                       20                             30
  CLUS_2                       15                             15
  CLUS_3                       10                             21
D41V4, multiclass
        clus
vv       DEL PEAK 17(13Q13.3) CNV DEL PEAK 17(13Q13.3) WILD-TYPE
  CLUS_1                        5                              6
  CLUS_2                       27                             37
  CLUS_3                       13                             23
D41V5, multiclass
        clus
vv       DEL PEAK 17(13Q13.3) CNV DEL PEAK 17(13Q13.3) WILD-TYPE
  CLUS_1                       14                             19
  CLUS_2                       23                             20
  CLUS_3                        5                              8
  CLUS_4                       10                             27
D41V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 17(13Q13.3) CNV         41   11
  DEL PEAK 17(13Q13.3) WILD-TYPE   47   27
        clus
vv       DEL PEAK 17(13Q13.3) CNV DEL PEAK 17(13Q13.3) WILD-TYPE
  CLUS_1                       41                             47
  CLUS_2                       11                             27

Clustering(42) Variable = Del Peak 18(14q32.31)
D42V1, multiclass
        clus
vv       DEL PEAK 18(14Q32.31) CNV DEL PEAK 18(14Q32.31) WILD-TYPE
  CLUS_1                         6                              36
  CLUS_2                        11                              21
  CLUS_3                         8                              44
D42V2, multiclass
        clus
vv       DEL PEAK 18(14Q32.31) CNV DEL PEAK 18(14Q32.31) WILD-TYPE
  CLUS_1                         4                              49
  CLUS_2                        11                              30
  CLUS_3                        10                              22
D42V3, multiclass
        clus
vv       DEL PEAK 18(14Q32.31) CNV DEL PEAK 18(14Q32.31) WILD-TYPE
  CLUS_1                         3                              47
  CLUS_2                         6                              24
  CLUS_3                        12                              19
D42V4, multiclass
        clus
vv       DEL PEAK 18(14Q32.31) CNV DEL PEAK 18(14Q32.31) WILD-TYPE
  CLUS_1                         3                               8
  CLUS_2                         5                              59
  CLUS_3                        13                              23
D42V5, multiclass
        clus
vv       DEL PEAK 18(14Q32.31) CNV DEL PEAK 18(14Q32.31) WILD-TYPE
  CLUS_1                         3                              30
  CLUS_2                         5                              38
  CLUS_3                         5                               8
  CLUS_4                        12                              25
D42V6, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 18(14Q32.31) CNV         14   11
  DEL PEAK 18(14Q32.31) WILD-TYPE   74   27
        clus
vv       DEL PEAK 18(14Q32.31) CNV DEL PEAK 18(14Q32.31) WILD-TYPE
  CLUS_1                        14                              74
  CLUS_2                        11                              27

Clustering(43) Variable = Del Peak 19(15q15.1)
D43V1, multiclass
        clus
vv       DEL PEAK 19(15Q15.1) CNV DEL PEAK 19(15Q15.1) WILD-TYPE
  CLUS_1                        7                             35
  CLUS_2                       17                             15
  CLUS_3                        5                             47
D43V2, multiclass
        clus
vv       DEL PEAK 19(15Q15.1) CNV DEL PEAK 19(15Q15.1) WILD-TYPE
  CLUS_1                        9                             44
  CLUS_2                       12                             29
  CLUS_3                        8                             24
D43V3, multiclass
        clus
vv       DEL PEAK 19(15Q15.1) CNV DEL PEAK 19(15Q15.1) WILD-TYPE
  CLUS_1                        9                             41
  CLUS_2                       10                             20
  CLUS_3                        7                             24
D43V4, multiclass
        clus
vv       DEL PEAK 19(15Q15.1) CNV DEL PEAK 19(15Q15.1) WILD-TYPE
  CLUS_1                        4                              7
  CLUS_2                       12                             52
  CLUS_3                       10                             26
D43V5, multiclass
        clus
vv       DEL PEAK 19(15Q15.1) CNV DEL PEAK 19(15Q15.1) WILD-TYPE
  CLUS_1                        4                             29
  CLUS_2                       14                             29
  CLUS_3                        1                             12
  CLUS_4                       10                             27
D43V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 19(15Q15.1) CNV         20    9
  DEL PEAK 19(15Q15.1) WILD-TYPE   68   29
        clus
vv       DEL PEAK 19(15Q15.1) CNV DEL PEAK 19(15Q15.1) WILD-TYPE
  CLUS_1                       20                             68
  CLUS_2                        9                             29

Clustering(44) Variable = Del Peak 20(16q11.2)
D44V1, multiclass
        clus
vv       DEL PEAK 20(16Q11.2) CNV DEL PEAK 20(16Q11.2) WILD-TYPE
  CLUS_1                       10                             32
  CLUS_2                        6                             26
  CLUS_3                        9                             43
D44V2, multiclass
        clus
vv       DEL PEAK 20(16Q11.2) CNV DEL PEAK 20(16Q11.2) WILD-TYPE
  CLUS_1                       10                             43
  CLUS_2                        4                             37
  CLUS_3                       11                             21
D44V3, multiclass
        clus
vv       DEL PEAK 20(16Q11.2) CNV DEL PEAK 20(16Q11.2) WILD-TYPE
  CLUS_1                        5                             45
  CLUS_2                        6                             24
  CLUS_3                       12                             19
D44V4, multiclass
        clus
vv       DEL PEAK 20(16Q11.2) CNV DEL PEAK 20(16Q11.2) WILD-TYPE
  CLUS_1                        4                              7
  CLUS_2                        7                             57
  CLUS_3                       12                             24
D44V5, multiclass
        clus
vv       DEL PEAK 20(16Q11.2) CNV DEL PEAK 20(16Q11.2) WILD-TYPE
  CLUS_1                        4                             29
  CLUS_2                        6                             37
  CLUS_3                        2                             11
  CLUS_4                       13                             24
D44V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 20(16Q11.2) CNV         11   14
  DEL PEAK 20(16Q11.2) WILD-TYPE   77   24
        clus
vv       DEL PEAK 20(16Q11.2) CNV DEL PEAK 20(16Q11.2) WILD-TYPE
  CLUS_1                       11                             77
  CLUS_2                       14                             24

Clustering(45) Variable = Del Peak 21(16q23.1)
D45V1, multiclass
        clus
vv       DEL PEAK 21(16Q23.1) CNV DEL PEAK 21(16Q23.1) WILD-TYPE
  CLUS_1                        9                             33
  CLUS_2                        7                             25
  CLUS_3                       12                             40
D45V2, multiclass
        clus
vv       DEL PEAK 21(16Q23.1) CNV DEL PEAK 21(16Q23.1) WILD-TYPE
  CLUS_1                        9                             44
  CLUS_2                        6                             35
  CLUS_3                       13                             19
D45V3, multiclass
        clus
vv       DEL PEAK 21(16Q23.1) CNV DEL PEAK 21(16Q23.1) WILD-TYPE
  CLUS_1                        3                             47
  CLUS_2                        9                             21
  CLUS_3                       13                             18
D45V4, multiclass
        clus
vv       DEL PEAK 21(16Q23.1) CNV DEL PEAK 21(16Q23.1) WILD-TYPE
  CLUS_1                        6                              5
  CLUS_2                        5                             59
  CLUS_3                       14                             22
D45V5, multiclass
        clus
vv       DEL PEAK 21(16Q23.1) CNV DEL PEAK 21(16Q23.1) WILD-TYPE
  CLUS_1                        2                             31
  CLUS_2                        9                             34
  CLUS_3                        3                             10
  CLUS_4                       14                             23
D45V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 21(16Q23.1) CNV         12   16
  DEL PEAK 21(16Q23.1) WILD-TYPE   76   22
        clus
vv       DEL PEAK 21(16Q23.1) CNV DEL PEAK 21(16Q23.1) WILD-TYPE
  CLUS_1                       12                             76
  CLUS_2                       16                             22

Clustering(46) Variable = Del Peak 22(17p12)
D46V1, multiclass
        clus
vv       DEL PEAK 22(17P12) CNV DEL PEAK 22(17P12) WILD-TYPE
  CLUS_1                     14                           28
  CLUS_2                     17                           15
  CLUS_3                     11                           41
D46V2, multiclass
        clus
vv       DEL PEAK 22(17P12) CNV DEL PEAK 22(17P12) WILD-TYPE
  CLUS_1                     23                           30
  CLUS_2                     11                           30
  CLUS_3                      8                           24
D46V3, multiclass
        clus
vv       DEL PEAK 22(17P12) CNV DEL PEAK 22(17P12) WILD-TYPE
  CLUS_1                     17                           33
  CLUS_2                     13                           17
  CLUS_3                      7                           24
D46V4, multiclass
        clus
vv       DEL PEAK 22(17P12) CNV DEL PEAK 22(17P12) WILD-TYPE
  CLUS_1                      4                            7
  CLUS_2                     23                           41
  CLUS_3                     10                           26
D46V5, multiclass
        clus
vv       DEL PEAK 22(17P12) CNV DEL PEAK 22(17P12) WILD-TYPE
  CLUS_1                     10                           23
  CLUS_2                     19                           24
  CLUS_3                      6                            7
  CLUS_4                      7                           30
D46V6, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 22(17P12) CNV         33    9
  DEL PEAK 22(17P12) WILD-TYPE   55   29
        clus
vv       DEL PEAK 22(17P12) CNV DEL PEAK 22(17P12) WILD-TYPE
  CLUS_1                     33                           55
  CLUS_2                      9                           29

Clustering(47) Variable = Del Peak 23(17q25.3)
D47V1, multiclass
        clus
vv       DEL PEAK 23(17Q25.3) CNV DEL PEAK 23(17Q25.3) WILD-TYPE
  CLUS_1                        7                             35
  CLUS_2                       10                             22
  CLUS_3                        5                             47
D47V2, multiclass
        clus
vv       DEL PEAK 23(17Q25.3) CNV DEL PEAK 23(17Q25.3) WILD-TYPE
  CLUS_1                       17                             36
  CLUS_2                        4                             37
  CLUS_3                        1                             31
D47V3, multiclass
        clus
vv       DEL PEAK 23(17Q25.3) CNV DEL PEAK 23(17Q25.3) WILD-TYPE
  CLUS_1                       11                             39
  CLUS_2                        7                             23
  CLUS_3                        1                             30
D47V4, multiclass
        clus
vv       DEL PEAK 23(17Q25.3) CNV DEL PEAK 23(17Q25.3) WILD-TYPE
  CLUS_1                        0                             11
  CLUS_2                       16                             48
  CLUS_3                        3                             33
D47V5, multiclass
        clus
vv       DEL PEAK 23(17Q25.3) CNV DEL PEAK 23(17Q25.3) WILD-TYPE
  CLUS_1                        5                             28
  CLUS_2                       14                             29
  CLUS_3                        1                             12
  CLUS_4                        2                             35
D47V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 23(17Q25.3) CNV         20    2
  DEL PEAK 23(17Q25.3) WILD-TYPE   68   36
        clus
vv       DEL PEAK 23(17Q25.3) CNV DEL PEAK 23(17Q25.3) WILD-TYPE
  CLUS_1                       20                             68
  CLUS_2                        2                             36

Clustering(48) Variable = Del Peak 24(19p13.3)
D48V1, multiclass
        clus
vv       DEL PEAK 24(19P13.3) CNV DEL PEAK 24(19P13.3) WILD-TYPE
  CLUS_1                       13                             29
  CLUS_2                       17                             15
  CLUS_3                        9                             43
D48V2, multiclass
        clus
vv       DEL PEAK 24(19P13.3) CNV DEL PEAK 24(19P13.3) WILD-TYPE
  CLUS_1                       16                             37
  CLUS_2                       13                             28
  CLUS_3                       10                             22
D48V3, multiclass
        clus
vv       DEL PEAK 24(19P13.3) CNV DEL PEAK 24(19P13.3) WILD-TYPE
  CLUS_1                        8                             42
  CLUS_2                       14                             16
  CLUS_3                       14                             17
D48V4, multiclass
        clus
vv       DEL PEAK 24(19P13.3) CNV DEL PEAK 24(19P13.3) WILD-TYPE
  CLUS_1                        2                              9
  CLUS_2                       17                             47
  CLUS_3                       17                             19
D48V5, multiclass
        clus
vv       DEL PEAK 24(19P13.3) CNV DEL PEAK 24(19P13.3) WILD-TYPE
  CLUS_1                        6                             27
  CLUS_2                       14                             29
  CLUS_3                        4                              9
  CLUS_4                       15                             22
D48V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 24(19P13.3) CNV         24   15
  DEL PEAK 24(19P13.3) WILD-TYPE   64   23
        clus
vv       DEL PEAK 24(19P13.3) CNV DEL PEAK 24(19P13.3) WILD-TYPE
  CLUS_1                       24                             64
  CLUS_2                       15                             23

Clustering(49) Variable = Del Peak 25(20p12.1)
D49V1, multiclass
        clus
vv       DEL PEAK 25(20P12.1) CNV DEL PEAK 25(20P12.1) WILD-TYPE
  CLUS_1                        6                             36
  CLUS_2                        5                             27
  CLUS_3                        6                             46
D49V2, multiclass
        clus
vv       DEL PEAK 25(20P12.1) CNV DEL PEAK 25(20P12.1) WILD-TYPE
  CLUS_1                        9                             44
  CLUS_2                        3                             38
  CLUS_3                        5                             27
D49V3, multiclass
        clus
vv       DEL PEAK 25(20P12.1) CNV DEL PEAK 25(20P12.1) WILD-TYPE
  CLUS_1                        5                             45
  CLUS_2                        3                             27
  CLUS_3                        5                             26
D49V4, multiclass
        clus
vv       DEL PEAK 25(20P12.1) CNV DEL PEAK 25(20P12.1) WILD-TYPE
  CLUS_1                        1                             10
  CLUS_2                        8                             56
  CLUS_3                        4                             32
D49V5, multiclass
        clus
vv       DEL PEAK 25(20P12.1) CNV DEL PEAK 25(20P12.1) WILD-TYPE
  CLUS_1                        5                             28
  CLUS_2                        6                             37
  CLUS_3                        0                             13
  CLUS_4                        6                             31
D49V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 25(20P12.1) CNV         12    5
  DEL PEAK 25(20P12.1) WILD-TYPE   76   33
        clus
vv       DEL PEAK 25(20P12.1) CNV DEL PEAK 25(20P12.1) WILD-TYPE
  CLUS_1                       12                             76
  CLUS_2                        5                             33

Clustering(50) Variable = Del Peak 26(21q21.1)
D50V1, multiclass
        clus
vv       DEL PEAK 26(21Q21.1) CNV DEL PEAK 26(21Q21.1) WILD-TYPE
  CLUS_1                       11                             31
  CLUS_2                       10                             22
  CLUS_3                        6                             46
D50V2, multiclass
        clus
vv       DEL PEAK 26(21Q21.1) CNV DEL PEAK 26(21Q21.1) WILD-TYPE
  CLUS_1                        9                             44
  CLUS_2                       12                             29
  CLUS_3                        6                             26
D50V3, multiclass
        clus
vv       DEL PEAK 26(21Q21.1) CNV DEL PEAK 26(21Q21.1) WILD-TYPE
  CLUS_1                        9                             41
  CLUS_2                        8                             22
  CLUS_3                        8                             23
D50V4, multiclass
        clus
vv       DEL PEAK 26(21Q21.1) CNV DEL PEAK 26(21Q21.1) WILD-TYPE
  CLUS_1                        2                              9
  CLUS_2                       12                             52
  CLUS_3                       11                             25
D50V5, multiclass
        clus
vv       DEL PEAK 26(21Q21.1) CNV DEL PEAK 26(21Q21.1) WILD-TYPE
  CLUS_1                        8                             25
  CLUS_2                        9                             34
  CLUS_3                        2                             11
  CLUS_4                        8                             29
D50V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 26(21Q21.1) CNV         19    8
  DEL PEAK 26(21Q21.1) WILD-TYPE   69   30
        clus
vv       DEL PEAK 26(21Q21.1) CNV DEL PEAK 26(21Q21.1) WILD-TYPE
  CLUS_1                       19                             69
  CLUS_2                        8                             30

Clustering(51) Variable = Del Peak 27(Xp11.3)
D51V1, multiclass
        clus
vv       DEL PEAK 27(XP11.3) CNV DEL PEAK 27(XP11.3) WILD-TYPE
  CLUS_1                       9                            33
  CLUS_2                      17                            15
  CLUS_3                      11                            41
D51V2, multiclass
        clus
vv       DEL PEAK 27(XP11.3) CNV DEL PEAK 27(XP11.3) WILD-TYPE
  CLUS_1                      24                            29
  CLUS_2                       8                            33
  CLUS_3                       5                            27
D51V3, multiclass
        clus
vv       DEL PEAK 27(XP11.3) CNV DEL PEAK 27(XP11.3) WILD-TYPE
  CLUS_1                      16                            34
  CLUS_2                      12                            18
  CLUS_3                       6                            25
D51V4, multiclass
        clus
vv       DEL PEAK 27(XP11.3) CNV DEL PEAK 27(XP11.3) WILD-TYPE
  CLUS_1                       4                             7
  CLUS_2                      23                            41
  CLUS_3                       7                            29
D51V5, multiclass
        clus
vv       DEL PEAK 27(XP11.3) CNV DEL PEAK 27(XP11.3) WILD-TYPE
  CLUS_1                       9                            24
  CLUS_2                      21                            22
  CLUS_3                       0                            13
  CLUS_4                       7                            30
D51V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 27(XP11.3) CNV         29    8
  DEL PEAK 27(XP11.3) WILD-TYPE   59   30
        clus
vv       DEL PEAK 27(XP11.3) CNV DEL PEAK 27(XP11.3) WILD-TYPE
  CLUS_1                      29                            59
  CLUS_2                       8                            30

Clustering(52) Variable = Del Peak 28(Xq21.33)
D52V1, multiclass
        clus
vv       DEL PEAK 28(XQ21.33) CNV DEL PEAK 28(XQ21.33) WILD-TYPE
  CLUS_1                        7                             35
  CLUS_2                       13                             19
  CLUS_3                        7                             45
D52V2, multiclass
        clus
vv       DEL PEAK 28(XQ21.33) CNV DEL PEAK 28(XQ21.33) WILD-TYPE
  CLUS_1                       19                             34
  CLUS_2                        5                             36
  CLUS_3                        3                             29
D52V3, multiclass
        clus
vv       DEL PEAK 28(XQ21.33) CNV DEL PEAK 28(XQ21.33) WILD-TYPE
  CLUS_1                       12                             38
  CLUS_2                       10                             20
  CLUS_3                        4                             27
D52V4, multiclass
        clus
vv       DEL PEAK 28(XQ21.33) CNV DEL PEAK 28(XQ21.33) WILD-TYPE
  CLUS_1                        3                              8
  CLUS_2                       19                             45
  CLUS_3                        4                             32
D52V5, multiclass
        clus
vv       DEL PEAK 28(XQ21.33) CNV DEL PEAK 28(XQ21.33) WILD-TYPE
  CLUS_1                        7                             26
  CLUS_2                       15                             28
  CLUS_3                        0                             13
  CLUS_4                        5                             32
D52V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 28(XQ21.33) CNV         22    5
  DEL PEAK 28(XQ21.33) WILD-TYPE   66   33
        clus
vv       DEL PEAK 28(XQ21.33) CNV DEL PEAK 28(XQ21.33) WILD-TYPE
  CLUS_1                       22                             66
  CLUS_2                        5                             33
                     V1                      V2                      V3 
              "CN_CNMF"      "METHLYATION_CNMF"          "MRNASEQ_CNMF" 
                     V4                      V5                      V6 
"MRNASEQ_CHIERARCHICAL"           "MIRSEQ_CNMF"  "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
