| GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140354/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COAD-TP/3140352/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3142015/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140794/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | COAD-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140320/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/3140317/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140324/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/3140321/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140340/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/3140341/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 16:33:39 02-05-13 |
| Completed: | |
| Elapsed: | 00 hrs 21 mins 09 secs |
step 1. GDAC_mergedClustering [id: 397281] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140354/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COAD-TP/3140352/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
| mirnacnmf | |
| mirnahc | |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3142015/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140794/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| mergedfile | COAD-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140320/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/3140317/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140324/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/3140321/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140340/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/3140341/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt |
| Output Files: | |
| COAD-TP.transferedmergedcluster.txt | |
| .lsf.out | |
| COAD-TP.mergedcluster.txt | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 16:33:39 02-05-13 |
| Completed: | 16:34:04 02-05-13 |
| Elapsed: | 00 hrs 00 mins 25 secs |
step 2. GDAC_mergedReport [id: 397282]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | COAD-TP.transferedmergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 16:33:39 02-05-13 |
| Completed: | 16:54:47 02-05-13 |
| Elapsed: | 00 hrs 21 mins 08 secs |