# Created: Thu May 02 16:34:04 EDT 2013 by cgaadm_deadline
# Job: 397281    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: GDAC_mergedClustering urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
# Parameters: 
#    mrnacnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140354/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    mrnahc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COAD-TP/3140352/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt
#    mirnacnmf = 
#    mirnahc = 
#    copynumber = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3142015/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    methlyationhc = 
#    methlyationcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140794/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    mergedfile = COAD-TP
#    PredictionU133aTCGA = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140320/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    PredictionU133aPhilips = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/3140317/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt
#    PredictionUNCTCGA = 
#    mRNAseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140324/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    mRNAseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/3140321/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt
#    miRseqcnmf = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COAD-TP/3140340/3.GDAC_CNMFselectcluster.Finished/COAD-TP.bestclus.txt
#    miRseqhc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COAD-TP/3140341/3.GDAC_selectBestcluster.Finished/COAD-TP.bestclus.txt
