GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140430/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COADREAD-TP/3140429/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3142918/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140968/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 mergedfile | COADREAD-TP |
GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140369/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140371/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140374/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140372/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140427/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140426/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
Execution Times: | |
Submitted: | 22:02:19 02-05-13 |
Completed: | |
Elapsed: | 00 hrs 13 mins 11 secs |
step 1. GDAC_mergedClustering [id: 397958] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140430/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COADREAD-TP/3140429/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
mirnacnmf | |
mirnahc | |
copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3142918/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
methlyationhc | |
methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140968/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
mergedfile | COADREAD-TP |
PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140369/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140371/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
PredictionUNCTCGA | |
mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140374/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140372/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140427/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140426/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
Output Files: | |
COADREAD-TP.transferedmergedcluster.txt | |
COADREAD-TP.mergedcluster.txt | |
.lsf.out | |
stdout.txt |
Execution Times: | |
Submitted: | 22:02:19 02-05-13 |
Completed: | 22:02:41 02-05-13 |
Elapsed: | 00 hrs 00 mins 21 secs |
step 2. GDAC_mergedReport [id: 397959]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
mergedcluster | COADREAD-TP.transferedmergedcluster.txt |
Output Files: | |
report.html | |
.lsf.out | |
stdout.txt |
Execution Times: | |
Submitted: | 22:02:19 02-05-13 |
Completed: | 22:15:29 02-05-13 |
Elapsed: | 00 hrs 13 mins 09 secs |