| GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140430/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COADREAD-TP/3140429/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3142918/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140968/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | COADREAD-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140369/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140371/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140374/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140372/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140427/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140426/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 22:02:19 02-05-13 |
| Completed: | |
| Elapsed: | 00 hrs 13 mins 11 secs |
step 1. GDAC_mergedClustering [id: 397958] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140430/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COADREAD-TP/3140429/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| mirnacnmf | |
| mirnahc | |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3142918/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140968/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| mergedfile | COADREAD-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140369/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140371/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140374/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140372/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/3140427/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/3140426/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| Output Files: | |
| COADREAD-TP.transferedmergedcluster.txt | |
| COADREAD-TP.mergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 22:02:19 02-05-13 |
| Completed: | 22:02:41 02-05-13 |
| Elapsed: | 00 hrs 00 mins 21 secs |
step 2. GDAC_mergedReport [id: 397959]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | COADREAD-TP.transferedmergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 22:02:19 02-05-13 |
| Completed: | 22:15:29 02-05-13 |
| Elapsed: | 00 hrs 13 mins 09 secs |