| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LIHC-TP/3142841/3.GDAC_CNMFselectcluster.Finished/LIHC-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LIHC-TP/3140974/3.GDAC_CNMFselectcluster.Finished/LIHC-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | LIHC-TP |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LIHC-TP/3140753/3.GDAC_CNMFselectcluster.Finished/LIHC-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LIHC-TP/3140754/3.GDAC_selectBestcluster.Finished/LIHC-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LIHC-TP/3140767/3.GDAC_CNMFselectcluster.Finished/LIHC-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LIHC-TP/3140774/3.GDAC_selectBestcluster.Finished/LIHC-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 16:53:50 02-05-13 |
| Completed: | |
| Elapsed: | 00 hrs 05 mins 06 secs |
step 1. GDAC_mergedClustering [id: 397373] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | |
| mrnahc | |
| mirnacnmf | |
| mirnahc | |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LIHC-TP/3142841/3.GDAC_CNMFselectcluster.Finished/LIHC-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LIHC-TP/3140974/3.GDAC_CNMFselectcluster.Finished/LIHC-TP.bestclus.txt |
| mergedfile | LIHC-TP |
| PredictionU133aTCGA | |
| PredictionU133aPhilips | |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LIHC-TP/3140753/3.GDAC_CNMFselectcluster.Finished/LIHC-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LIHC-TP/3140754/3.GDAC_selectBestcluster.Finished/LIHC-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LIHC-TP/3140767/3.GDAC_CNMFselectcluster.Finished/LIHC-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LIHC-TP/3140774/3.GDAC_selectBestcluster.Finished/LIHC-TP.bestclus.txt |
| Output Files: | |
| LIHC-TP.mergedcluster.txt | |
| LIHC-TP.transferedmergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 16:53:53 02-05-13 |
| Completed: | 16:57:09 02-05-13 |
| Elapsed: | 00 hrs 03 mins 15 secs |
step 2. GDAC_mergedReport [id: 397374]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | LIHC-TP.mergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 16:53:53 02-05-13 |
| Completed: | 16:58:56 02-05-13 |
| Elapsed: | 00 hrs 05 mins 02 secs |