| GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3140828/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/LUAD-TP/3140826/3.GDAC_selectBestcluster.Finished/LUAD-TP.bestclus.txt |
| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3143018/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3142075/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | LUAD-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3140814/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUAD-TP/3140806/3.GDAC_selectBestcluster.Finished/LUAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3140807/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUAD-TP/3140808/3.GDAC_selectBestcluster.Finished/LUAD-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3140827/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUAD-TP/3140823/3.GDAC_selectBestcluster.Finished/LUAD-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 18:32:01 02-05-13 |
| Completed: | |
| Elapsed: | 01 hrs 12 mins 01 secs |
step 1. GDAC_mergedClustering [id: 397748] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3140828/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/LUAD-TP/3140826/3.GDAC_selectBestcluster.Finished/LUAD-TP.bestclus.txt |
| mirnacnmf | |
| mirnahc | |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3143018/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3142075/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| mergedfile | LUAD-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3140814/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUAD-TP/3140806/3.GDAC_selectBestcluster.Finished/LUAD-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3140807/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUAD-TP/3140808/3.GDAC_selectBestcluster.Finished/LUAD-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUAD-TP/3140827/3.GDAC_CNMFselectcluster.Finished/LUAD-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUAD-TP/3140823/3.GDAC_selectBestcluster.Finished/LUAD-TP.bestclus.txt |
| Output Files: | |
| LUAD-TP.mergedcluster.txt | |
| LUAD-TP.transferedmergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 18:32:01 02-05-13 |
| Completed: | 18:32:20 02-05-13 |
| Elapsed: | 00 hrs 00 mins 18 secs |
step 2. GDAC_mergedReport [id: 397749]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | LUAD-TP.mergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 18:32:01 02-05-13 |
| Completed: | 19:44:01 02-05-13 |
| Elapsed: | 01 hrs 11 mins 59 secs |