| GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3140907/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/LUSC-TP/3140904/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3144293/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3141119/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | LUSC-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3140849/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/3140851/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3140845/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/3140852/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3140870/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/3140869/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 18:36:09 02-05-13 |
| Completed: | |
| Elapsed: | 01 hrs 08 mins 10 secs |
step 1. GDAC_mergedClustering [id: 397752] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3140907/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/LUSC-TP/3140904/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| mirnacnmf | |
| mirnahc | |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3144293/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3141119/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| mergedfile | LUSC-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3140849/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/3140851/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3140845/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/3140852/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/LUSC-TP/3140870/3.GDAC_CNMFselectcluster.Finished/LUSC-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/LUSC-TP/3140869/3.GDAC_selectBestcluster.Finished/LUSC-TP.bestclus.txt |
| Output Files: | |
| LUSC-TP.mergedcluster.txt | |
| LUSC-TP.transferedmergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 18:36:09 02-05-13 |
| Completed: | 18:36:28 02-05-13 |
| Elapsed: | 00 hrs 00 mins 18 secs |
step 2. GDAC_mergedReport [id: 397753]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | LUSC-TP.mergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 18:36:09 02-05-13 |
| Completed: | 19:44:19 02-05-13 |
| Elapsed: | 01 hrs 08 mins 09 secs |