| GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140950/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/OV-TP/3140949/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mirnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140896/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mirnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mirnaConsensusClusteringPipeline/OV-TP/3140897/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3143749/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140992/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | OV-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140900/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/3140894/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140901/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/3140891/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140914/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/3140916/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 22:18:37 02-05-13 |
| Completed: | |
| Elapsed: | 00 hrs 04 mins 33 secs |
step 1. GDAC_mergedClustering [id: 397979] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140950/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/OV-TP/3140949/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| mirnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140896/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| mirnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mirnaConsensusClusteringPipeline/OV-TP/3140897/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3143749/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140992/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| mergedfile | OV-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140900/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/3140894/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140901/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/3140891/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/OV-TP/3140914/3.GDAC_CNMFselectcluster.Finished/OV-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/OV-TP/3140916/3.GDAC_selectBestcluster.Finished/OV-TP.bestclus.txt |
| Output Files: | |
| OV-TP.mergedcluster.txt | |
| OV-TP.transferedmergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 22:18:37 02-05-13 |
| Completed: | 22:19:03 02-05-13 |
| Elapsed: | 00 hrs 00 mins 25 secs |
step 2. GDAC_mergedReport [id: 397980]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | OV-TP.mergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 22:18:37 02-05-13 |
| Completed: | 22:23:09 02-05-13 |
| Elapsed: | 00 hrs 04 mins 31 secs |