Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
genset_table2	STAD-TP.sig_genesets_2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_muts_table	STAD-TP.cosmic_mutations.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cluster_table	STAD-TP.clustered_muts.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table	STAD-TP.cosmic_sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
cosmic_table2	STAD-TP.cosmic_sig_genes2.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
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geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
geneset_table	STAD-TP.sig_genesets.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_filt_rep_path	STAD-TP.mutation_filtering_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
categories_table	STAD-TP.mutation_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
mut_pre_rep_path	STAD-TP.mutation_preprocessing_report.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	XPOT.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PCDH15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SPRYD5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	POTEG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	WBSCR17.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PHF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	TPTE.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	CPS1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	ELF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	PARK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
breakdown_table	STAD-TP.mutation_breakdown.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:37	MutSigNozzleReport2.0_2013042100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReport2.0.Level_4.2013042100.0.0	yes
