
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_selectBestcluster.32.3613/selecte_best_cluster_new_v1.R")
> result <- main("-mPearson", "-u/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/396474/outputprefix.expclu.gct", "-w/xchip/cga/gdac-prod/tcga-gdac/jobResults/miRseq_preprocessor/UCEC-TP/3141243/0.miRseq_preprocessor.Finished/UCEC-TP.miRseq_RPKM_log2.txt", "-vUCEC-TP", "-a/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/396475/outputprefix.expclu.sub392.2.clu", "-b/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/396475/outputprefix.expclu.sub392.3.clu", "-c/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/396475/outputprefix.expclu.sub392.4.clu", "-d/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/396475/outputprefix.expclu.sub392.5.clu", "-e/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/396475/outputprefix.expclu.sub392.6.clu", "-f/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/396475/outputprefix.expclu.sub392.7.clu", "-g/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/396475/outputprefix.expclu.sub392.8.clu")
 [1] "allexpression" "file.clu.2"    "file.clu.3"    "file.clu.4"   
 [5] "file.clu.5"    "file.clu.6"    "file.clu.7"    "file.clu.8"   
 [9] "inputexp"      "measure"       "output"       
> q(save="no")
