
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.49.4134/CNV2ClinicalAnalysis_nozzle_onlysig_focal.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.49.4134/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/417060/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/BLCA-TP/3348537/BLCA-TP.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=BLCA-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=BLCA-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=140, in cluster file=150, common to both=134
[1]  62 134
[1] "Amp Peak  1(1p34.2)"
[1] 3
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                           42                            92 
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                           42                            92 
[1] "Amp Peak  2(1p22.3)"
[1] 3
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                           42                            92 
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                           42                            92 
[1] "Amp Peak  3(1q21.3)"
[1] 3
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                           71                            63 
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                           71                            63 
[1] "Amp Peak  4(1q23.3)"
[1] 3
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                           75                            59 
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                           75                            59 
[1] "Amp Peak  5(3p25.2)"
[1] 3
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                           66                            68 
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                           66                            68 
[1] "Amp Peak  6(3q26.32)"
[1] 3
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                            78                             56 
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                            78                             56 
[1] "Amp Peak  7(4p16.3)"
[1] 3
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                           27                           107 
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                           27                           107 
[1] "Amp Peak  8(4q13.3)"
[1] 3
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                           19                           115 
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                           19                           115 
[1] "Amp Peak  9(5p15.1)"
[1] 3
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                           65                            69 
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                           65                            69 
[1] "Amp Peak 10(6p22.3)"
[1] 3
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                           56                            78 
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                           56                            78 
[1] "Amp Peak 11(6q12)"
[1] 3
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                         23                         111 
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                         23                         111 
[1] "Amp Peak 12(6q21)"
[1] 3
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                         16                         118 
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                         16                         118 
[1] "Amp Peak 13(7p11.2)"
[1] 3
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                           73                            61 
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                           73                            61 
[1] "Amp Peak 14(8p11.23)"
[1] 3
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                            47                             87 
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                            47                             87 
[1] "Amp Peak 15(8p11.21)"
[1] 3
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                            46                             88 
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                            46                             88 
[1] "Amp Peak 16(8q22.3)"
[1] 3
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                           85                            49 
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                           85                            49 
[1] "Amp Peak 17(8q24.21)"
[1] 3
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                            83                             51 
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                            83                             51 
[1] "Amp Peak 18(10p15.1)"
[1] 3
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                            57                             77 
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                            57                             77 
[1] "Amp Peak 19(11q13.3)"
[1] 3
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                            53                             81 
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                            53                             81 
[1] "Amp Peak 20(12q15)"
[1] 3
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                          44                           90 
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                          44                           90 
[1] "Amp Peak 21(13q34)"
[1] 3
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                          52                           82 
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                          52                           82 
[1] "Amp Peak 22(16p12.1)"
[1] 3
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                            37                             97 
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                            37                             97 
[1] "Amp Peak 23(17q11.2)"
[1] 3
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                            64                             70 
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                            64                             70 
[1] "Amp Peak 24(17q12)"
[1] 3
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                          58                           76 
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                          58                           76 
[1] "Amp Peak 25(19q12)"
[1] 3
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                          59                           75 
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                          59                           75 
[1] "Amp Peak 26(19q13.43)"
[1] 3
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                             57                              77 
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                             57                              77 
[1] "Amp Peak 27(20q11.21)"
[1] 3
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                             95                              39 
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                             95                              39 
[1] "Amp Peak 28(22q11.23)"
[1] 3
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                             32                             102 
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                             32                             102 
[1] "Del Peak  1(1p36.11)"
[1] 3
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                            24                            110 
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                            24                            110 
[1] "Del Peak  2(1q32.1)"
[1] 3
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                           26                           108 
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                           26                           108 
[1] "Del Peak  3(2q22.1)"
[1] 3
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                           41                            93 
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                           41                            93 
[1] "Del Peak  4(2q34)"
[1] 3
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                         57                          77 
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                         57                          77 
[1] "Del Peak  5(2q37.1)"
[1] 3
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                           68                            66 
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                           68                            66 
[1] "Del Peak  6(3p21.31)"
[1] 3
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                            44                             90 
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                            44                             90 
[1] "Del Peak  7(3p14.2)"
[1] 3
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                           45                            89 
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                           45                            89 
[1] "Del Peak  8(3p12.3)"
[1] 3
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                           38                            96 
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                           38                            96 
[1] "Del Peak  9(4q22.1)"
[1] 3
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                           53                            81 
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                           53                            81 
[1] "Del Peak 10(4q34.2)"
[1] 3
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                           59                            75 
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                           59                            75 
[1] "Del Peak 11(5q11.2)"
[1] 3
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                           71                            63 
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                           71                            63 
[1] "Del Peak 12(5q35.1)"
[1] 3
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                           68                            66 
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                           68                            66 
[1] "Del Peak 13(6p25.3)"
[1] 3
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                           38                            96 
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                           38                            96 
[1] "Del Peak 14(6q21)"
[1] 3
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                         57                          77 
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                         57                          77 
[1] "Del Peak 15(8p23.1)"
[1] 3
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                           75                            59 
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                           75                            59 
[1] "Del Peak 16(9p23)"
[1] 3
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                         61                          73 
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                         61                          73 
[1] "Del Peak 17(9p21.3)"
[1] 3
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                           79                            55 
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                           79                            55 
[1] "Del Peak 18(10p12.1)"
[1] 3
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                            28                            106 
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                            28                            106 
[1] "Del Peak 19(10q23.31)"
[1] 3
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                             58                              76 
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                             58                              76 
[1] "Del Peak 20(11p15.5)"
[1] 3
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                            68                             66 
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                            68                             66 
[1] "Del Peak 21(11q25)"
[1] 3
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                          42                           92 
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                          42                           92 
[1] "Del Peak 22(13q14.2)"
[1] 3
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                            52                             82 
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                            52                             82 
[1] "Del Peak 23(14q12)"
[1] 3
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                          39                           95 
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                          39                           95 
[1] "Del Peak 24(14q32.31)"
[1] 3
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                             38                              96 
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                             38                              96 
[1] "Del Peak 25(15q13.1)"
[1] 3
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                            50                             84 
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                            50                             84 
[1] "Del Peak 26(16p13.3)"
[1] 3
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                            49                             85 
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                            49                             85 
[1] "Del Peak 27(16q23.1)"
[1] 3
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                            38                             96 
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                            38                             96 
[1] "Del Peak 28(17p12)"
[1] 3
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                          71                           63 
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                          71                           63 
[1] "Del Peak 29(18q23)"
[1] 3
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                          58                           76 
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                          58                           76 
[1] "Del Peak 30(19p13.3)"
[1] 3
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                            54                             80 
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                            54                             80 
[1] "Del Peak 31(22q13.32)"
[1] 3
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                             54                              80 
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                             54                              80 
[1] "Del Peak 32(Xp11.3)"
[1] 3
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                           37                            97 
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                           37                            97 
[1] "Del Peak 33(Xq21.33)"
[1] 3
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                            31                            103 
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                            31                            103 
[1] "Del Peak 34(Xq23)"
[1] 3
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                         30                         104 
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                         30                         104 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "PRIMARYSITEOFDESEASE"                  
 [7] "GENDER"                                
 [8] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [9] "DAYSTOLASTKNOWNALIVE"                  
[10] "RADIATIONTHERAPY"                      
[11] "KARNOFSKYPERFORMANCESCORE"             
[12] "HISTOLOGICALTYPE"                      
[13] "RADIATIONS.RADIATION.REGIMENINDICATION"
[14] "NUMBERPACKYEARSSMOKED"                 
[15] "DISTANT.METASTASIS"                    
[16] "LYMPH.NODE.METASTASIS"                 
[17] "NUMBER.OF.LYMPH.NODES"                 
[18] "TUMOR.STAGECODE"                       
[19] "NEOPLASM.DISEASESTAGE"                 
[20] "BATCHNUMBER"                           

Input Data has 20 rows and 134 columns.

[1] "Batch" "20"   
[1] "Last Follow UP"
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
         389           NA           NA           NA           NA          363 
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
          NA           NA           NA           NA           NA           NA 
TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA 
          NA           NA           NA           NA           NA          179 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR 
         111           NA           NA           59           61           14 
TCGA-CF-A1HS TCGA-CF-A27C TCGA-CF-A3MF TCGA-CF-A3MG TCGA-CF-A3MH TCGA-CF-A3MI 
          13           21           NA           NA           NA           NA 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL 
          NA           NA          219          166          158          246 
TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB 
          77           NA          955          273          214          271 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX 
        3616         3056          218          178          202           55 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL 
         322           NA         3767         2291           67          121 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
         238           NA          319         1151          168          350 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 
          NA          252           NA         3989         1248           NA 
TCGA-E5-A2PC TCGA-E7-A3X6 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 
        1108           NA            3          268          253           NA 
TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA 
         209           NA          336          272          242          974 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP 
          NA          334          186          207           NA          138 
TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
          NA           NA           59          240          208          461 
TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
         106          124           NA         1518          806          172 
TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY 
          NA          997          525          214           NA           25 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD 
          87           68           40          137           42           31 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
          76           33          234           64           95          177 
TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX 
         194          230           98          133          195          187 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QG TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK 
         173          232           NA          237          125          202 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-HQ-A2OE TCGA-K4-A3WS 
         194          162           46          204           NA          265 
TCGA-K4-A3WU TCGA-K4-A3WV 
         104          141 
Variable 1:'AGE':	nDistinctValues=43,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=33,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=90,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=13,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'RADIATION.THERAPY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'KARNOFSKY.PERFORMANCE.SCORE':	nDistinctValues=7,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 12:'HISTOLOGICAL.TYPE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 13:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 14:'NUMBERPACKYEARSSMOKED':	nDistinctValues=35,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 15:'DISTANT.METASTASIS':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 16:'LYMPH.NODE.METASTASIS':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 17:'NUMBER.OF.LYMPH.NODES':	nDistinctValues=13,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 18:'TUMOR.STAGECODE':	nDistinctValues=9,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 19:'NEOPLASM.DISEASESTAGE':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 20:'BATCH.NUMBER':	nDistinctValues=13,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                         "GENDER"                     
[3] "KARNOFSKY.PERFORMANCE.SCORE" "NUMBERPACKYEARSSMOKED"      
[5] "DISTANT.METASTASIS"          "LYMPH.NODE.METASTASIS"      
[7] "NUMBER.OF.LYMPH.NODES"       "TUMOR.STAGECODE"            
[9] "NEOPLASM.DISEASESTAGE"      
[1] "TUMOR.?STAGE" "8"           
[1] "stage2"
vv
 T1  T2 T2A T2B  T3 T3A T3B  T4 T4A 
  1   6   4  20  26  22  19   2  18 
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 134 columns, 1 survival variables, and 9 non-survival variables.
AGE, nv=43, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE
KARNOFSKY.PERFORMANCE.SCORE, nv=7, binary=FALSE, numeric=TRUE
NUMBERPACKYEARSSMOKED, nv=35, binary=FALSE, numeric=TRUE
DISTANT.METASTASIS, nv=3, binary=FALSE, numeric=FALSE
LYMPH.NODE.METASTASIS, nv=5, binary=FALSE, numeric=FALSE
NUMBER.OF.LYMPH.NODES, nv=13, binary=FALSE, numeric=TRUE
TUMOR.STAGECODE, nv=0, binary=FALSE, numeric=TRUE
NEOPLASM.DISEASESTAGE, nv=4, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1p34.2)
D1V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  1(1P34.2) CNV       29 12
  AMP PEAK  1(1P34.2) WILD-TYPE 64 22
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                           41                            86 
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                           12                            22 
$`AMP PEAK  1(1P34.2) CNV`
TCGA-BT-A20J TCGA-BT-A20R TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 
       19.00         5.06         5.88         3.65         8.98         1.94 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AB 
        0.43        12.92         5.19         2.53         8.98         8.91 
TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IT 
       10.59       123.85         3.98         7.82         8.22         5.52 
TCGA-DK-A3IU TCGA-DK-A3X2 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SJ 
       11.51        17.98         8.94         4.01        32.02        24.30 
TCGA-FD-A3SL TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       10.98        19.79         1.94         7.89        15.16         4.08 
TCGA-G2-A2EL TCGA-G2-A3IE TCGA-GC-A3OO TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 
       26.93        20.12         1.32         1.02         1.08         7.69 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JW TCGA-GV-A40G TCGA-K4-A3WV 
        5.82         6.38         6.41         5.33         4.64 

$`AMP PEAK  1(1P34.2) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U 
       26.10        12.16        17.85        19.46        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR 
        5.06         8.35         8.25         4.64         2.01         0.46 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A5 
        0.69         4.90         7.20         5.46         8.09         2.14 
TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
       31.40         7.04       118.88       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IQ 
        6.64         1.81         7.76        75.32         2.20        10.49 
TCGA-DK-A3IS TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 
       37.84         9.67         8.28        10.55       131.15        41.03 
TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B8 
       36.43         0.10         8.81         8.32         6.87        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP 
        8.94         7.96         6.12         6.81         5.49         4.54 
TCGA-FD-A3SQ TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ 
       46.78         6.84         3.48         3.22        49.91        26.50 
TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM 
        5.65        32.78        17.26         7.04         0.82         2.86 
TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A3OP TCGA-GD-A3OQ 
        2.24         4.50         1.38         2.50         2.10         3.12 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF 
        7.56         3.22         4.37         6.15         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-H4-A2HQ 
        7.79         4.11         6.64         6.38         1.51         6.71 
TCGA-K4-A3WS TCGA-K4-A3WU 
        8.71         3.42 

      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE 
                        7.690                         6.955 
[1] "0.4 - 123.8 (7.7)" "0.1 - 131.2 (7.0)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK  1(1P34.2) CNV" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  1(1P34.2) CNV"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  1(1P34.2) WILD-TYPE"       "AMP PEAK  1(1P34.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  1(1P34.2) WILD-TYPE" "AMP PEAK  1(1P34.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK  1(1P34.2) CNV" 
[1] "hr=" "1.2"
D1V2, continuous
D1V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  1(1P34.2) CNV         12   30
  AMP PEAK  1(1P34.2) WILD-TYPE   22   70
        clus
vv       AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE
  FEMALE                      12                            22
  MALE                        30                            70
D1V4, continuous
D1V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  1(1P34.2) CNV       23  2 17
  AMP PEAK  1(1P34.2) WILD-TYPE 54  3 34
D1V6, multiclass
    clus
vv   AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE
  M0                      23                            54
  M1                       2                             3
  MX                      17                            34
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  1(1P34.2) CNV       20  7 10  1  3
  AMP PEAK  1(1P34.2) WILD-TYPE 55  7 17  4  7
D1V7, multiclass
D1V8, continuous
D1V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK  1(1P34.2) CNV             0       12        10       18
  AMP PEAK  1(1P34.2) WILD-TYPE       1       24        34       30
D1V10, multiclass
           clus
vv          AMP PEAK  1(1P34.2) CNV AMP PEAK  1(1P34.2) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       12                            24
  STAGE III                      10                            34
  STAGE IV                       18                            30

Clustering(2) Variable = Amp Peak  2(1p22.3)
D2V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  2(1P22.3) CNV       28 13
  AMP PEAK  2(1P22.3) WILD-TYPE 65 21
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                           41                            86 
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                           13                            21 
$`AMP PEAK  2(1P22.3) CNV`
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-CF-A1HS 
       19.00        26.10         5.06         5.88         1.94         0.43 
TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A2HX TCGA-DK-A2I2 
       12.92         5.19         2.14        31.40         1.81         7.76 
TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IU TCGA-DK-A3X1 
      123.85         3.98         7.82         8.22        11.51        41.03 
TCGA-DK-A3X2 TCGA-FD-A3B7 TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SP TCGA-FD-A3SR 
       17.98         4.01        24.30        10.98         4.54        19.79 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE 
        1.94         7.89        15.16         3.48         4.08         3.22 
TCGA-G2-A3IE TCGA-GC-A3OO TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42P 
       20.12         1.32         1.08         2.10         5.82         6.38 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QF TCGA-GV-A40G TCGA-K4-A3WV 
        4.37         6.41         7.63         5.33         4.64 

$`AMP PEAK  2(1P22.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V 
       12.16        17.85        19.46        14.89         8.61         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F6 
        8.35         8.25         3.65         4.64         8.98         2.01 
TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL 
        0.46         0.69         4.90         7.20         5.46         8.09 
TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD 
        2.53         8.98         7.04         8.91       118.88       100.47 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I6 TCGA-DK-A3IK 
        7.17         5.85         6.64        10.59        75.32         2.20 
TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX 
       10.49        37.84         5.52         9.67         8.28        10.55 
TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 
      131.15        36.43         0.10         8.81         8.32         8.94 
TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SM 
        6.87        11.05         8.94         7.96        32.02         6.12 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A43U TCGA-G2-A2EF TCGA-G2-A2EJ 
        6.81         5.49        46.78         6.84        49.91        26.50 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY 
        5.65        26.93        32.78        17.26         7.04         0.82 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC 
        2.86         2.24         4.50         1.38         1.02         2.50 
TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JX TCGA-GV-A3JZ 
        7.69         3.12         7.56         3.22         6.15         5.69 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-H4-A2HQ 
        7.79         4.11         6.64         6.38         1.51         6.71 
TCGA-K4-A3WS TCGA-K4-A3WU 
        8.71         3.42 

      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE 
                        5.880                         7.185 
[1] "0.4 - 123.8 (5.9)" "0.1 - 131.2 (7.2)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  2(1P22.3) CNV"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  2(1P22.3) CNV" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  2(1P22.3) WILD-TYPE"       "AMP PEAK  2(1P22.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  2(1P22.3) WILD-TYPE" "AMP PEAK  2(1P22.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK  2(1P22.3) CNV" 
[1] "hr=" "1.4"
D2V2, continuous
D2V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  2(1P22.3) CNV         10   32
  AMP PEAK  2(1P22.3) WILD-TYPE   24   68
        clus
vv       AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE
  FEMALE                      10                            24
  MALE                        32                            68
D2V4, continuous
D2V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  2(1P22.3) CNV       20  2 20
  AMP PEAK  2(1P22.3) WILD-TYPE 57  3 31
D2V6, multiclass
    clus
vv   AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE
  M0                      20                            57
  M1                       2                             3
  MX                      20                            31
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  2(1P22.3) CNV       20  6 10  3  3
  AMP PEAK  2(1P22.3) WILD-TYPE 55  8 17  2  7
D2V7, multiclass
D2V8, continuous
D2V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK  2(1P22.3) CNV             0       10        12       18
  AMP PEAK  2(1P22.3) WILD-TYPE       1       26        32       30
D2V10, multiclass
           clus
vv          AMP PEAK  2(1P22.3) CNV AMP PEAK  2(1P22.3) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       10                            26
  STAGE III                      12                            32
  STAGE IV                       18                            30

Clustering(3) Variable = Amp Peak  3(1q21.3)
D3V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  3(1Q21.3) CNV       48 19
  AMP PEAK  3(1Q21.3) WILD-TYPE 45 15
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                           67                            60 
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                           19                            15 
$`AMP PEAK  3(1Q21.3) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20T 
        2.66         6.74        19.00        26.10         5.06        14.89 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 
        5.06         8.35         5.88         3.65         8.98         1.94 
TCGA-CF-A1HS TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 
        0.43         5.46         5.19         2.53         2.14         8.98 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 
      118.88       100.47         1.81        10.59         7.76       123.85 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IU 
        2.20         3.98         7.82         8.22         5.52        11.51 
TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B7 TCGA-FD-A3NA 
       41.03        17.98        36.43         0.10         4.01        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SR TCGA-FD-A3SS 
       24.30        10.98         6.12         5.49        19.79         1.94 
TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2ES 
        7.89        15.16         3.48         4.08         3.22        17.26 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3WC TCGA-GC-A3YS 
       20.12         0.82         1.32         4.50         2.50         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW 
        7.69         2.10         5.82         6.38         4.37         6.41 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G 
        6.15         5.69         7.63         4.11         6.38         5.33 
TCGA-K4-A3WS 
        8.71 

$`AMP PEAK  3(1Q21.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P 
       12.79         7.33         6.58        11.93        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR 
       19.46         8.61         8.25         4.64         2.01         0.46 
TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A6 
        0.69        12.92         4.90         7.20         8.09        31.40 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I6 
        7.04         8.91         7.17         5.85         6.64        75.32 
TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY 
       10.49        37.84         9.67         8.28        10.55       131.15 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 
        8.81         8.32         8.94         6.87        11.05         8.94 
TCGA-FD-A3N6 TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43U TCGA-G2-A2EF 
        7.96         6.81         4.54        46.78         6.84        49.91 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A3IB TCGA-GC-A3BM 
       26.50         5.65        26.93        32.78         7.04         2.86 
TCGA-GC-A3I6 TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R 
        2.24         1.38         1.02         3.12         7.56         3.22 
TCGA-GV-A3QH TCGA-GV-A3QK TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        7.79         6.64         1.51         6.71         3.42         4.64 

      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                         0.10                          0.46 
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE 
                        6.120                         7.675 
[1] "0.1 - 123.8 (6.1)" "0.5 - 131.2 (7.7)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  3(1Q21.3) WILD-TYPE"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK  3(1Q21.3) CNV"       "AMP PEAK  3(1Q21.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  3(1Q21.3) WILD-TYPE" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  3(1Q21.3) CNV" "AMP PEAK  3(1Q21.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"AMP PEAK  3(1Q21.3) WILD-TYPE" 
[1] "hr=" "1.3"
D3V2, continuous
D3V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  3(1Q21.3) CNV         17   54
  AMP PEAK  3(1Q21.3) WILD-TYPE   17   46
        clus
vv       AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE
  FEMALE                      17                            17
  MALE                        54                            46
D3V4, continuous
D3V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  3(1Q21.3) CNV       37  4 29
  AMP PEAK  3(1Q21.3) WILD-TYPE 40  1 22
D3V6, multiclass
    clus
vv   AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE
  M0                      37                            40
  M1                       4                             1
  MX                      29                            22
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  3(1Q21.3) CNV       32 10 18  5  5
  AMP PEAK  3(1Q21.3) WILD-TYPE 43  4  9  0  5
D3V7, multiclass
D3V8, continuous
D3V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK  3(1Q21.3) CNV             0       18        19       32
  AMP PEAK  3(1Q21.3) WILD-TYPE       1       18        25       16
D3V10, multiclass
           clus
vv          AMP PEAK  3(1Q21.3) CNV AMP PEAK  3(1Q21.3) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       18                            18
  STAGE III                      19                            25
  STAGE IV                       32                            16

Clustering(4) Variable = Amp Peak  4(1q23.3)
D4V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  4(1Q23.3) CNV       53 18
  AMP PEAK  4(1Q23.3) WILD-TYPE 40 16
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                           71                            56 
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                           18                            16 
$`AMP PEAK  4(1Q23.3) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20T 
       12.79         2.66         6.74        19.00        26.10        14.89 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        5.06         8.35         5.88         3.65         4.64         8.98 
TCGA-C4-A0F0 TCGA-CF-A1HS TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1A3 TCGA-DK-A1A5 
        1.94         0.43         7.20         5.46         2.53         2.14 
TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 
        8.98       118.88       100.47        10.59         7.76       123.85 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IS 
       75.32         2.20         3.98         7.82         8.22        37.84 
TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-E7-A3Y1 
        5.52        11.51        41.03        17.98        36.43         0.10 
TCGA-FD-A3B4 TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM 
        8.32         4.01        32.02        24.30        10.98         6.12 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 
        5.49         4.54        19.79         1.94         7.89        15.16 
TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A3VY TCGA-GC-A3OO 
        3.48         4.08         3.22        49.91         0.82         1.32 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42P 
        2.50         1.08         7.69         2.10         5.82         6.38 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QI 
        4.37         6.41         6.15         5.69         7.63         4.11 
TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        5.33         1.51         6.71         8.71         3.42 

$`AMP PEAK  4(1Q23.3) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q 
        7.33         6.58        11.93        12.16        17.85        19.46 
TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20X TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C 
        5.06         8.61         8.25         2.01         0.46         0.69 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1AA 
       12.92         4.90         5.19         8.09        31.40         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A3IQ 
        8.91         7.17         5.85         6.64         1.81        10.49 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-FD-A3B3 TCGA-FD-A3B5 
        9.67         8.28        10.55       131.15         8.81         8.94 
TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SN TCGA-FD-A3SQ 
        6.87        11.05         8.94         7.96         6.81        46.78 
TCGA-FD-A43U TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES 
        6.84        26.50         5.65        26.93        32.78        17.26 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3RC 
        7.04        20.12         2.86         2.24         4.50         1.38 
TCGA-GC-A3RD TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3QH TCGA-GV-A3QK 
        1.02         3.12         7.56         3.22         7.79         6.64 
TCGA-GV-A40E TCGA-K4-A3WV 
        6.38         4.64 

      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                         0.10                          0.46 
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE 
                        6.380                         7.445 
[1] "0.1 - 123.8 (6.4)" "0.5 - 131.2 (7.4)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-K4-A3WV 
"AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-K4-A3WV 
"AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  4(1Q23.3) WILD-TYPE" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  4(1Q23.3) CNV" "AMP PEAK  4(1Q23.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  4(1Q23.3) WILD-TYPE"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  4(1Q23.3) CNV"       "AMP PEAK  4(1Q23.3) CNV" 
                   TCGA-K4-A3WV 
"AMP PEAK  4(1Q23.3) WILD-TYPE" 
[1] "hr=" "1.1"
D4V2, continuous
D4V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  4(1Q23.3) CNV         17   58
  AMP PEAK  4(1Q23.3) WILD-TYPE   17   42
        clus
vv       AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE
  FEMALE                      17                            17
  MALE                        58                            42
D4V4, continuous
D4V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  4(1Q23.3) CNV       37  5 32
  AMP PEAK  4(1Q23.3) WILD-TYPE 40  0 19
D4V6, multiclass
    clus
vv   AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE
  M0                      37                            40
  M1                       5                             0
  MX                      32                            19
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  4(1Q23.3) CNV       36  9 19  5  5
  AMP PEAK  4(1Q23.3) WILD-TYPE 39  5  8  0  5
D4V7, multiclass
D4V8, continuous
D4V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK  4(1Q23.3) CNV             1       17        21       33
  AMP PEAK  4(1Q23.3) WILD-TYPE       0       19        23       15
D4V10, multiclass
           clus
vv          AMP PEAK  4(1Q23.3) CNV AMP PEAK  4(1Q23.3) WILD-TYPE
  STAGE I                         1                             0
  STAGE II                       17                            19
  STAGE III                      21                            23
  STAGE IV                       33                            15

Clustering(5) Variable = Amp Peak  5(3p25.2)
D5V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  5(3P25.2) CNV       48 13
  AMP PEAK  5(3P25.2) WILD-TYPE 45 21
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                           61                            66 
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                           13                            21 
$`AMP PEAK  5(3P25.2) CNV`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A20N TCGA-BT-A20W TCGA-BT-A2LA 
       12.79         7.33         2.66        26.10         8.35         5.88 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3YL 
        3.65         4.64         0.46         4.90         7.20         8.09 
TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD 
        2.53         2.14        31.40         8.98       118.88       100.47 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IM TCGA-DK-A3IN 
        1.81        10.59       123.85        75.32         7.82         8.22 
TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B5 
       37.84        11.51        41.03        17.98         0.10         8.94 
TCGA-FD-A3B6 TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
        6.87        24.30        10.98         7.89         6.84        15.16 
TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EO TCGA-G2-A2ES 
        3.48         4.08         3.22        49.91        32.78        17.26 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GD-A3OP TCGA-GD-A3OS 
       20.12         0.82         1.32         4.50         2.10         5.82 
TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        6.38         4.37         6.41         5.69         7.63         7.79 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        4.11         6.64         5.33         1.51         8.71         3.42 
TCGA-K4-A3WV 
        4.64 

$`AMP PEAK  5(3P25.2) WILD-TYPE`
TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O TCGA-BT-A20P 
        6.74         6.58        11.93        19.00        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20X 
       19.46         5.06        14.89         8.61         5.06         8.25 
TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN 
        8.98         1.94         2.01         0.43         0.69        12.92 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF 
        5.46         5.19         7.04         8.91         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2I2 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IT 
        6.64         7.76         2.20         3.98        10.49         5.52 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-FD-A3B3 
        9.67         8.28        10.55       131.15        36.43         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA 
        8.32         4.01        11.05         8.94         7.96        32.02 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR 
        6.12         6.81         5.49         4.54        46.78        19.79 
TCGA-FD-A3SS TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM 
        1.94        26.50         5.65        26.93         7.04         2.86 
TCGA-GC-A3I6 TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 
        2.24         1.38         1.02         2.50         1.08         7.69 
TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JX TCGA-GV-A40E TCGA-H4-A2HQ 
        3.12         7.56         3.22         6.15         6.38         6.71 

      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                         0.10                          0.43 
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE 
                        7.200                         6.925 
[1] "0.1 - 123.8 (7.2)" "0.4 - 131.2 (6.9)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-K4-A3WV 
      "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-K4-A3WV 
      "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  5(3P25.2) WILD-TYPE" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  5(3P25.2) WILD-TYPE"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK  5(3P25.2) CNV" "AMP PEAK  5(3P25.2) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  5(3P25.2) CNV"       "AMP PEAK  5(3P25.2) CNV" 
                   TCGA-K4-A3WV 
      "AMP PEAK  5(3P25.2) CNV" 
[1] "hr=" "1.9"
D5V2, continuous
D5V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  5(3P25.2) CNV         11   55
  AMP PEAK  5(3P25.2) WILD-TYPE   23   45
        clus
vv       AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE
  FEMALE                      11                            23
  MALE                        55                            45
D5V4, continuous
D5V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  5(3P25.2) CNV       37  2 26
  AMP PEAK  5(3P25.2) WILD-TYPE 40  3 25
D5V6, multiclass
    clus
vv   AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE
  M0                      37                            40
  M1                       2                             3
  MX                      26                            25
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  5(3P25.2) CNV       34  6 17  3  5
  AMP PEAK  5(3P25.2) WILD-TYPE 41  8 10  2  5
D5V7, multiclass
D5V8, continuous
D5V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK  5(3P25.2) CNV             1       19        18       25
  AMP PEAK  5(3P25.2) WILD-TYPE       0       17        26       23
D5V10, multiclass
           clus
vv          AMP PEAK  5(3P25.2) CNV AMP PEAK  5(3P25.2) WILD-TYPE
  STAGE I                         1                             0
  STAGE II                       19                            17
  STAGE III                      18                            26
  STAGE IV                       25                            23

Clustering(6) Variable = Amp Peak  6(3q26.32)
D6V1, survival
                                sevent
clus2                             0  1
  AMP PEAK  6(3Q26.32) CNV       60 14
  AMP PEAK  6(3Q26.32) WILD-TYPE 33 20
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                            74                             53 
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                            14                             20 
$`AMP PEAK  6(3Q26.32) CNV`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         2.66         6.74        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA 
       26.10         5.06         5.06         8.35         8.25         5.88 
TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR 
        4.64         0.46         0.43        12.92         4.90         7.20 
TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC 
        5.46         8.09         2.53        31.40         8.98       118.88 
TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A3IK TCGA-DK-A3IM 
      100.47         7.17         1.81        10.59         2.20         7.82 
TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC 
       10.49        37.84        11.51        41.03        17.98        36.43 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3NA 
        0.10         8.81         8.32         6.87         8.94        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-G2-A2EF 
       24.30        10.98         6.84         3.48         4.08        49.91 
TCGA-G2-A2EJ TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3I6 
       26.50        32.78        17.26         7.04         0.82         2.24 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS 
        1.32         4.50         1.38         1.02         2.50         1.08 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QF 
        5.82         6.38         7.56         6.41         6.15         7.63 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS 
        7.79         4.11         6.64         5.33         6.71         8.71 
TCGA-K4-A3WU TCGA-K4-A3WV 
        3.42         4.64 

$`AMP PEAK  6(3Q26.32) WILD-TYPE`
TCGA-BT-A0S7 TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U 
        6.58        12.16        17.85        19.46        14.89         8.61 
TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A3QU 
        3.65         8.98         1.94         2.01         0.69         5.19 
TCGA-DK-A1A5 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I2 
        2.14         7.04         8.91         5.85         6.64         7.76 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IV 
      123.85        75.32         3.98         8.22         5.52         9.67 
TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 
        8.28        10.55       131.15         8.94         4.01        11.05 
TCGA-FD-A3N6 TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
        7.96         6.12         6.81         5.49         4.54        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EK 
       19.79         1.94         7.89        15.16         3.22         5.65 
TCGA-G2-A2EL TCGA-G2-A3IE TCGA-GC-A3BM TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
       26.93        20.12         2.86         7.69         2.10         3.12 
TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A40E TCGA-H4-A2HO 
        3.22         4.37         5.69         6.38         1.51 

      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                          0.10                           0.69 
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                        118.88                         131.15 
      AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE 
                         7.105                          6.810 
[1] "0.1 - 118.9 (7.1)" "0.7 - 131.2 (6.8)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-K4-A3WV 
      "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-K4-A3WV 
      "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK  6(3Q26.32) CNV" "AMP PEAK  6(3Q26.32) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK  6(3Q26.32) WILD-TYPE"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK  6(3Q26.32) CNV"       "AMP PEAK  6(3Q26.32) CNV" 
                    TCGA-K4-A3WV 
      "AMP PEAK  6(3Q26.32) CNV" 
[1] "hr=" "2.1"
D6V2, continuous
D6V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  6(3Q26.32) CNV         19   59
  AMP PEAK  6(3Q26.32) WILD-TYPE   15   41
        clus
vv       AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE
  FEMALE                       19                             15
  MALE                         59                             41
D6V4, continuous
D6V5, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK  6(3Q26.32) CNV       47  3 27
  AMP PEAK  6(3Q26.32) WILD-TYPE 30  2 24
D6V6, multiclass
    clus
vv   AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE
  M0                       47                             30
  M1                        3                              2
  MX                       27                             24
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK  6(3Q26.32) CNV       46  5 18  2  6
  AMP PEAK  6(3Q26.32) WILD-TYPE 29  9  9  3  4
D6V7, multiclass
D6V8, continuous
D6V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK  6(3Q26.32) CNV             1       22        26       25
  AMP PEAK  6(3Q26.32) WILD-TYPE       0       14        18       23
D6V10, multiclass
           clus
vv          AMP PEAK  6(3Q26.32) CNV AMP PEAK  6(3Q26.32) WILD-TYPE
  STAGE I                          1                              0
  STAGE II                        22                             14
  STAGE III                       26                             18
  STAGE IV                        25                             23

Clustering(7) Variable = Amp Peak  7(4p16.3)
D7V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  7(4P16.3) CNV       20  4
  AMP PEAK  7(4P16.3) WILD-TYPE 73 30
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                           24                           103 
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                            4                            30 
$`AMP PEAK  7(4P16.3) CNV`
TCGA-BL-A0C8 TCGA-BT-A20P TCGA-BT-A20T TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A27C 
       12.79        17.85        14.89         1.94         2.01         0.69 
TCGA-CU-A3KJ TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AC TCGA-DK-A2I2 TCGA-DK-A2I6 
        5.46         2.14        31.40       118.88         7.76        75.32 
TCGA-DK-A3IM TCGA-DK-A3IS TCGA-FD-A3NA TCGA-FD-A3SL TCGA-G2-A2EO TCGA-G2-A2ES 
        7.82        37.84        32.02        10.98        32.78        17.26 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RC TCGA-GU-A42R TCGA-H4-A2HO TCGA-K4-A3WS 
        0.82         2.86         1.38         3.22         1.51         8.71 

$`AMP PEAK  7(4P16.3) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
        7.33         2.66         6.74         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V 
       26.10        12.16        19.46         5.06         8.61         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        8.35         8.25         5.88         3.65         4.64         8.98 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3QU 
        0.46         0.43        12.92         4.90         7.20         5.19 
TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD 
        8.09         2.53         8.98         7.04         8.91       100.47 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 
        7.17         5.85         6.64         1.81        10.59       123.85 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IU 
        2.20         3.98         8.22        10.49         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 
        9.67         8.28        10.55       131.15        41.03        17.98 
TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 
       36.43         0.10         8.81         8.32         8.94         6.87 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SJ TCGA-FD-A3SM 
        4.01        11.05         8.94         7.96        24.30         6.12 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS 
        6.81         5.49         4.54        46.78        19.79         1.94 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE 
        7.89         6.84        15.16         3.48         4.08         3.22 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3IE 
       49.91        26.50         5.65        26.93         7.04        20.12 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS 
        2.24         1.32         4.50         1.02         2.50         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q 
        7.69         2.10         3.12         5.82         6.38         7.56 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        4.37         6.41         6.15         5.69         7.63         7.79 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WU 
        4.11         6.64         6.38         5.33         6.71         3.42 
TCGA-K4-A3WV 
        4.64 

      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                         0.69                          0.10 
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                       118.88                        131.15 
      AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE 
                        8.265                         6.840 
[1] "0.7 - 118.9 (8.3)" "0.1 - 131.2 (6.8)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK  7(4P16.3) CNV"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  7(4P16.3) CNV"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK  7(4P16.3) CNV"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  7(4P16.3) CNV"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK  7(4P16.3) CNV"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  7(4P16.3) CNV"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  7(4P16.3) WILD-TYPE"       "AMP PEAK  7(4P16.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  7(4P16.3) WILD-TYPE" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK  7(4P16.3) CNV" "AMP PEAK  7(4P16.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"AMP PEAK  7(4P16.3) WILD-TYPE" 
[1] "hr=" "2.7"
D7V2, continuous
D7V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  7(4P16.3) CNV          3   24
  AMP PEAK  7(4P16.3) WILD-TYPE   31   76
        clus
vv       AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE
  FEMALE                       3                            31
  MALE                        24                            76
D7V4, continuous
D7V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  7(4P16.3) CNV       21  1  4
  AMP PEAK  7(4P16.3) WILD-TYPE 56  4 47
D7V6, multiclass
    clus
vv   AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE
  M0                      21                            56
  M1                       1                             4
  MX                       4                            47
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  7(4P16.3) CNV       19  3  1  1  1
  AMP PEAK  7(4P16.3) WILD-TYPE 56 11 26  4  9
D7V7, multiclass
D7V8, continuous
D7V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK  7(4P16.3) CNV             1       11         9        5
  AMP PEAK  7(4P16.3) WILD-TYPE       0       25        35       43
D7V10, multiclass
           clus
vv          AMP PEAK  7(4P16.3) CNV AMP PEAK  7(4P16.3) WILD-TYPE
  STAGE I                         1                             0
  STAGE II                       11                            25
  STAGE III                       9                            35
  STAGE IV                        5                            43

Clustering(8) Variable = Amp Peak  8(4q13.3)
D8V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  8(4Q13.3) CNV       14  5
  AMP PEAK  8(4Q13.3) WILD-TYPE 79 29
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                           19                           108 
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                            5                            29 
$`AMP PEAK  8(4Q13.3) CNV`
TCGA-BT-A20N TCGA-BT-A2LD TCGA-C4-A0F6 TCGA-CU-A3KJ TCGA-DK-A1A5 TCGA-DK-A1A7 
       26.10         3.65         2.01         5.46         2.14         8.98 
TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-FD-A3NA TCGA-FD-A3SR 
        7.76        75.32        41.03        17.98        32.02        19.79 
TCGA-G2-A2EJ TCGA-G2-A3VY TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GU-A42P TCGA-GV-A3JW 
       26.50         0.82         2.50         7.69         6.38         6.41 
TCGA-K4-A3WV 
        4.64 

$`AMP PEAK  8(4Q13.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T 
       19.00        12.16        17.85        19.46         5.06        14.89 
TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH 
        8.61         5.06         8.35         8.25         5.88         4.64 
TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN 
        8.98         1.94         0.46         0.43         0.69        12.92 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 
        4.90         7.20         5.19         8.09         2.53        31.40 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
        7.04         8.91       118.88       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IL 
        6.64         1.81        10.59       123.85         2.20         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
        7.82         8.22        10.49        37.84         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 
        9.67         8.28        10.55       131.15        36.43         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        8.81         8.32         8.94         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        8.94         7.96        24.30        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U 
        5.49         4.54        46.78         1.94         7.89         6.84 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EK 
       15.16         3.48         4.08         3.22        49.91         5.65 
TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3BM 
       26.93        32.78        17.26         7.04        20.12         2.86 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS 
        2.24         1.32         4.50         1.38         1.02         1.08 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV 
        2.10         3.12         5.82         7.56         3.22         4.37 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK 
        6.15         5.69         7.63         7.79         4.11         6.64 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        6.38         5.33         1.51         6.71         8.71         3.42 

      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                         0.82                          0.10 
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                        75.32                        131.15 
      AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE 
                        7.690                         6.955 
[1] "0.8 - 75.3 (7.7)"  "0.1 - 131.2 (7.0)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  8(4Q13.3) CNV"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  8(4Q13.3) CNV"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  8(4Q13.3) CNV"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  8(4Q13.3) CNV" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK  8(4Q13.3) WILD-TYPE"       "AMP PEAK  8(4Q13.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  8(4Q13.3) WILD-TYPE" "AMP PEAK  8(4Q13.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK  8(4Q13.3) CNV" 
[1] "hr=" "1.5"
D8V2, continuous
D8V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  8(4Q13.3) CNV          9   10
  AMP PEAK  8(4Q13.3) WILD-TYPE   25   90
        clus
vv       AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE
  FEMALE                       9                            25
  MALE                        10                            90
D8V4, continuous
D8V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  8(4Q13.3) CNV       11  0  7
  AMP PEAK  8(4Q13.3) WILD-TYPE 66  5 44
D8V6, multiclass
    clus
vv   AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE
  M0                      11                            66
  M1                       0                             5
  MX                       7                            44
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  8(4Q13.3) CNV        9  3  4  1  1
  AMP PEAK  8(4Q13.3) WILD-TYPE 66 11 23  4  9
D8V7, multiclass
D8V8, continuous
D8V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK  8(4Q13.3) CNV             0        6         5        8
  AMP PEAK  8(4Q13.3) WILD-TYPE       1       30        39       40
D8V10, multiclass
           clus
vv          AMP PEAK  8(4Q13.3) CNV AMP PEAK  8(4Q13.3) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                        6                            30
  STAGE III                       5                            39
  STAGE IV                        8                            40

Clustering(9) Variable = Amp Peak  9(5p15.1)
D9V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  9(5P15.1) CNV       43 17
  AMP PEAK  9(5P15.1) WILD-TYPE 50 17
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                           60                            67 
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                           17                            17 
$`AMP PEAK  9(5P15.1) CNV`
TCGA-BL-A0C8 TCGA-BL-A3JM TCGA-BT-A20N TCGA-BT-A20P TCGA-BT-A20T TCGA-BT-A20V 
       12.79         6.74        26.10        17.85        14.89         5.06 
TCGA-BT-A20W TCGA-BT-A2LA TCGA-C4-A0EZ TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR 
        8.35         5.88         8.98         0.43        12.92         7.20 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1AD TCGA-DK-A2I4 TCGA-DK-A2I6 
        5.46         5.19         2.53       100.47       123.85        75.32 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WX TCGA-DK-A3X1 
        7.82         8.22        11.51         9.67        10.55        41.03 
TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3N5 TCGA-FD-A3NA 
       36.43         8.81         8.32         8.94         8.94        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FJ-A3ZF 
       24.30         6.81         5.49         4.54        19.79         4.08 
TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EO TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY 
        3.22        49.91        32.78         7.04        20.12         0.82 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A3OP 
        2.24         1.32         4.50         1.02         1.08         2.10 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ 
        5.82         6.38         4.37         6.41         6.15         5.69 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ 
        7.63         7.79         4.11         6.38         5.33         6.71 

$`AMP PEAK  9(5P15.1) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O 
        7.33         2.66         6.58        11.93        19.00        12.16 
TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A2LD TCGA-BT-A3PH 
       19.46         5.06         8.61         8.25         3.65         4.64 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A3YL 
        1.94         2.01         0.46         0.69         4.90         8.09 
TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC 
        2.14        31.40         8.98         7.04         8.91       118.88 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 
        7.17         5.85         6.64         1.81        10.59         7.76 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3WW 
        2.20         3.98        10.49        37.84         5.52         8.28 
TCGA-DK-A3WY TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
      131.15        17.98         0.10         6.87         4.01        11.05 
TCGA-FD-A3N6 TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FD-A43N 
        7.96        10.98         6.12        46.78         1.94         7.89 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
        6.84        15.16         3.48        26.50         5.65        26.93 
TCGA-G2-A2ES TCGA-GC-A3BM TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GD-A3OQ 
       17.26         2.86         1.38         2.50         7.69         3.12 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        7.56         3.22         6.64         1.51         8.71         3.42 
TCGA-K4-A3WV 
        4.64 

      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE 
                         7.12                          6.87 
[1] "0.4 - 123.8 (7.1)" "0.1 - 131.2 (6.9)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-K4-A3WV 
"AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-K4-A3WV 
"AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK  9(5P15.1) CNV" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK  9(5P15.1) CNV"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK  9(5P15.1) WILD-TYPE"       "AMP PEAK  9(5P15.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK  9(5P15.1) WILD-TYPE" "AMP PEAK  9(5P15.1) WILD-TYPE" 
                   TCGA-K4-A3WV 
"AMP PEAK  9(5P15.1) WILD-TYPE" 
[1] "hr=" "1.1"
D9V2, continuous
D9V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  9(5P15.1) CNV         14   51
  AMP PEAK  9(5P15.1) WILD-TYPE   20   49
        clus
vv       AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE
  FEMALE                      14                            20
  MALE                        51                            49
D9V4, continuous
D9V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK  9(5P15.1) CNV       34  2 28
  AMP PEAK  9(5P15.1) WILD-TYPE 43  3 23
D9V6, multiclass
    clus
vv   AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE
  M0                      34                            43
  M1                       2                             3
  MX                      28                            23
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK  9(5P15.1) CNV       34 10  9  1 10
  AMP PEAK  9(5P15.1) WILD-TYPE 41  4 18  4  0
D9V7, multiclass
D9V8, continuous
D9V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK  9(5P15.1) CNV             1       18        23       21
  AMP PEAK  9(5P15.1) WILD-TYPE       0       18        21       27
D9V10, multiclass
           clus
vv          AMP PEAK  9(5P15.1) CNV AMP PEAK  9(5P15.1) WILD-TYPE
  STAGE I                         1                             0
  STAGE II                       18                            18
  STAGE III                      23                            21
  STAGE IV                       21                            27

Clustering(10) Variable = Amp Peak 10(6p22.3)
D10V1, survival
                               sevent
clus2                            0  1
  AMP PEAK 10(6P22.3) CNV       42 13
  AMP PEAK 10(6P22.3) WILD-TYPE 51 21
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                           55                            72 
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                           13                            21 
$`AMP PEAK 10(6P22.3) CNV`
TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A20R TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD 
        2.66         6.58         5.06         8.35         5.88         3.65 
TCGA-C4-A0EZ TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1A6 
        8.98         0.43        12.92         5.19         2.14        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 
        8.98       118.88       100.47        10.59         7.76       123.85 
TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3WX 
       75.32         3.98         7.82        37.84        11.51        10.55 
TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3SJ 
       36.43         8.81         6.87         4.01         8.94        24.30 
TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF 
        4.54        19.79         7.89        15.16         3.48         4.08 
TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO 
        3.22        49.91         0.82         2.86         2.24         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GU-A42P 
        4.50         1.38         1.02         1.08         7.69         6.38 
TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QH TCGA-GV-A40E TCGA-GV-A40G 
        3.22         6.41         5.69         7.79         6.38         5.33 
TCGA-K4-A3WV 
        4.64 

$`AMP PEAK 10(6P22.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N 
       12.79         7.33         6.74        11.93        19.00        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V 
       12.16        17.85        19.46        14.89         8.61         5.06 
TCGA-BT-A20X TCGA-BT-A3PH TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C 
        8.25         4.64         1.94         2.01         0.46         0.69 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1AA 
        4.90         7.20         5.46         8.09         2.53         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A3IK 
        8.91         7.17         5.85         6.64         1.81         2.20 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY 
        8.22        10.49         5.52         9.67         8.28       131.15 
TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B8 
       41.03        17.98         0.10         8.32         8.94        11.05 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO 
        7.96        32.02        10.98         6.12         6.81         5.49 
TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FD-A43U TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
       46.78         1.94         6.84        26.50         5.65        26.93 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3WC TCGA-GD-A3OP 
       32.78        17.26         7.04        20.12         2.50         2.10 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3QF 
        3.12         5.82         7.56         4.37         6.15         7.63 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        4.11         6.64         1.51         6.71         8.71         3.42 

      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE 
                        6.410                         7.185 
[1] "0.4 - 123.8 (6.4)" "0.1 - 131.2 (7.2)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK 10(6P22.3) CNV" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"AMP PEAK 10(6P22.3) WILD-TYPE"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK 10(6P22.3) CNV"       "AMP PEAK 10(6P22.3) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK 10(6P22.3) WILD-TYPE" "AMP PEAK 10(6P22.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK 10(6P22.3) CNV" 
[1] "hr=" "1.3"
D10V2, continuous
D10V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 10(6P22.3) CNV         15   41
  AMP PEAK 10(6P22.3) WILD-TYPE   19   59
        clus
vv       AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE
  FEMALE                      15                            19
  MALE                        41                            59
D10V4, continuous
D10V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK 10(6P22.3) CNV       31  2 22
  AMP PEAK 10(6P22.3) WILD-TYPE 46  3 29
D10V6, multiclass
    clus
vv   AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE
  M0                      31                            46
  M1                       2                             3
  MX                      22                            29
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK 10(6P22.3) CNV       30  9  9  3  3
  AMP PEAK 10(6P22.3) WILD-TYPE 45  5 18  2  7
D10V7, multiclass
D10V8, continuous
D10V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 10(6P22.3) CNV             0       18        16       20
  AMP PEAK 10(6P22.3) WILD-TYPE       1       18        28       28
D10V10, multiclass
           clus
vv          AMP PEAK 10(6P22.3) CNV AMP PEAK 10(6P22.3) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       18                            18
  STAGE III                      16                            28
  STAGE IV                       20                            28

Clustering(11) Variable = Amp Peak 11(6q12)
D11V1, survival
                             sevent
clus2                          0  1
  AMP PEAK 11(6Q12) CNV       19  4
  AMP PEAK 11(6Q12) WILD-TYPE 74 30
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                         23                         104 
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                          4                          30 
$`AMP PEAK 11(6Q12) CNV`
TCGA-BT-A0S7 TCGA-BT-A2LA TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1AC TCGA-DK-A1AD 
        6.58         5.88         7.20         5.46       118.88       100.47 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3WX TCGA-FD-A3B7 TCGA-FJ-A3ZE 
       75.32         2.20         7.82        10.55         4.01         3.48 
TCGA-FT-A3EE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC 
        3.22         0.82         2.86         1.32         4.50         1.38 
TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GV-A3JW TCGA-GV-A40E TCGA-GV-A40G 
        1.08         7.69         6.41         6.38         5.33 

$`AMP PEAK 11(6Q12) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         2.66         6.74        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T 
       26.10        12.16        17.85        19.46         5.06        14.89 
TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD TCGA-BT-A3PH 
        8.61         5.06         8.35         8.25         3.65         4.64 
TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C 
        8.98         1.94         2.01         0.46         0.43         0.69 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 
       12.92         4.90         5.19         8.09         2.53         2.14 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF 
       31.40         8.98         7.04         8.91         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL 
        6.64         1.81        10.59         7.76       123.85         3.98 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV 
        8.22        10.49        37.84         5.52        11.51         9.67 
TCGA-DK-A3WW TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-E7-A3Y1 
        8.28       131.15        41.03        17.98        36.43         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 
        8.81         8.32         8.94         6.87        11.05         8.94 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        7.96        32.02        24.30        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N 
        5.49         4.54        46.78        19.79         1.94         7.89 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
        6.84        15.16         4.08        49.91        26.50         5.65 
TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3I6 
       26.93        32.78        17.26         7.04        20.12         2.24 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P 
        1.02         2.50         2.10         3.12         5.82         6.38 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF 
        7.56         3.22         4.37         6.15         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS 
        7.79         4.11         6.64         1.51         6.71         8.71 
TCGA-K4-A3WU TCGA-K4-A3WV 
        3.42         4.64 

      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                       0.82                        0.10 
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                     118.88                      131.15 
      AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE 
                      5.460                       7.595 
[1] "0.8 - 118.9 (5.5)" "0.1 - 131.2 (7.6)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-K4-A3WV 
"AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-K4-A3WV 
"AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
      "AMP PEAK 11(6Q12) CNV" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"AMP PEAK 11(6Q12) WILD-TYPE"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
      "AMP PEAK 11(6Q12) CNV"       "AMP PEAK 11(6Q12) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"AMP PEAK 11(6Q12) WILD-TYPE" "AMP PEAK 11(6Q12) WILD-TYPE" 
                 TCGA-K4-A3WV 
"AMP PEAK 11(6Q12) WILD-TYPE" 
[1] "hr=" "1.2"
D11V2, continuous
D11V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 11(6Q12) CNV          3   20
  AMP PEAK 11(6Q12) WILD-TYPE   31   80
        clus
vv       AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE
  FEMALE                     3                          31
  MALE                      20                          80
D11V4, continuous
D11V5, continuous
                             vv
clus                          M0 M1 MX
  AMP PEAK 11(6Q12) CNV       13  1  8
  AMP PEAK 11(6Q12) WILD-TYPE 64  4 43
D11V6, multiclass
    clus
vv   AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE
  M0                    13                          64
  M1                     1                           4
  MX                     8                          43
                             vv
clus                          N0 N1 N2 N3 NX
  AMP PEAK 11(6Q12) CNV       13  2  4  1  2
  AMP PEAK 11(6Q12) WILD-TYPE 62 12 23  4  8
D11V7, multiclass
D11V8, continuous
D11V9, continuous
                             vv
clus                          STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 11(6Q12) CNV             0        7         9        7
  AMP PEAK 11(6Q12) WILD-TYPE       1       29        35       41
D11V10, multiclass
           clus
vv          AMP PEAK 11(6Q12) CNV AMP PEAK 11(6Q12) WILD-TYPE
  STAGE I                       0                           1
  STAGE II                      7                          29
  STAGE III                     9                          35
  STAGE IV                      7                          41

Clustering(12) Variable = Amp Peak 12(6q21)
D12V1, survival
                             sevent
clus2                          0  1
  AMP PEAK 12(6Q21) CNV       13  3
  AMP PEAK 12(6Q21) WILD-TYPE 80 31
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                         16                         111 
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                          3                          31 
$`AMP PEAK 12(6Q21) CNV`
TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A2LA TCGA-CF-A1HS TCGA-CU-A0YR TCGA-DK-A1A3 
        6.58        19.00         5.88         0.43         7.20         2.53 
TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A3WX TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF 
        8.98       118.88        10.55        15.16         3.48         4.08 
TCGA-GC-A3BM TCGA-GC-A3OO TCGA-GC-A3YS TCGA-GD-A2C5 
        2.86         1.32         1.08         7.69 

$`AMP PEAK 12(6Q21) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20N 
       12.79         7.33         2.66         6.74        11.93        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U 
       12.16        17.85        19.46         5.06        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        5.06         8.35         8.25         3.65         4.64         8.98 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO 
        1.94         2.01         0.46         0.69        12.92         4.90 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA 
        5.46         5.19         8.09         2.14        31.40         7.04 
TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX 
        8.91       100.47         7.17         5.85         6.64         1.81 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL 
       10.59         7.76       123.85        75.32         2.20         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
        7.82         8.22        10.49        37.84         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC 
        9.67         8.28       131.15        41.03        17.98        36.43 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 
        0.10         8.81         8.32         8.94         6.87         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL 
       11.05         8.94         7.96        32.02        24.30        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR 
        6.12         6.81         5.49         4.54        46.78        19.79 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ 
        1.94         7.89         6.84         3.22        49.91        26.50 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE 
        5.65        26.93        32.78        17.26         7.04        20.12 
TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC 
        0.82         2.24         4.50         1.38         1.02         2.50 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R 
        2.10         3.12         5.82         6.38         7.56         3.22 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        4.37         6.41         6.15         5.69         7.63         7.79 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ 
        4.11         6.64         6.38         5.33         1.51         6.71 
TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        8.71         3.42         4.64 

      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                       0.43                        0.10 
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                     118.88                      131.15 
      AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE 
                       6.23                        7.04 
[1] "0.4 - 118.9 (6.2)" "0.1 - 131.2 (7.0)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
      "AMP PEAK 12(6Q21) CNV"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "AMP PEAK 12(6Q21) CNV"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WV 
"AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
      "AMP PEAK 12(6Q21) CNV"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "AMP PEAK 12(6Q21) CNV"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WV 
"AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
      "AMP PEAK 12(6Q21) CNV"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
      "AMP PEAK 12(6Q21) CNV" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"AMP PEAK 12(6Q21) WILD-TYPE"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "AMP PEAK 12(6Q21) CNV"       "AMP PEAK 12(6Q21) CNV" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"AMP PEAK 12(6Q21) WILD-TYPE" "AMP PEAK 12(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WV 
"AMP PEAK 12(6Q21) WILD-TYPE" 
[1] "hr=" "1.1"
D12V2, continuous
D12V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 12(6Q21) CNV          4   12
  AMP PEAK 12(6Q21) WILD-TYPE   30   88
        clus
vv       AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE
  FEMALE                     4                          30
  MALE                      12                          88
D12V4, continuous
D12V5, continuous
                             vv
clus                          M0 M1 MX
  AMP PEAK 12(6Q21) CNV       10  1  5
  AMP PEAK 12(6Q21) WILD-TYPE 67  4 46
D12V6, multiclass
    clus
vv   AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE
  M0                    10                          67
  M1                     1                           4
  MX                     5                          46
                             vv
clus                          N0 N1 N2 N3 NX
  AMP PEAK 12(6Q21) CNV        9  1  5  1  0
  AMP PEAK 12(6Q21) WILD-TYPE 66 13 22  4 10
D12V7, multiclass
D12V8, continuous
D12V9, continuous
                             vv
clus                          STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 12(6Q21) CNV             0        3         5        7
  AMP PEAK 12(6Q21) WILD-TYPE       1       33        39       41
D12V10, multiclass
           clus
vv          AMP PEAK 12(6Q21) CNV AMP PEAK 12(6Q21) WILD-TYPE
  STAGE I                       0                           1
  STAGE II                      3                          33
  STAGE III                     5                          39
  STAGE IV                      7                          41

Clustering(13) Variable = Amp Peak 13(7p11.2)
D13V1, survival
                               sevent
clus2                            0  1
  AMP PEAK 13(7P11.2) CNV       49 21
  AMP PEAK 13(7P11.2) WILD-TYPE 44 13
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                           70                            57 
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                           21                            13 
$`AMP PEAK 13(7P11.2) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O 
       12.79         2.66         6.58        19.00        26.10        12.16 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0F6 
        5.06         8.35         8.25         5.88         3.65         2.01 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-DK-A1A3 TCGA-DK-A1A5 
        0.43        12.92         4.90         5.46         2.53         2.14 
TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 
        8.98       118.88       100.47         1.81        10.59         7.76 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
      123.85        75.32         2.20         3.98         7.82         8.22 
TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC 
       37.84        11.51         9.67        41.03        17.98        36.43 
TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3SJ 
        8.81         8.94         6.87         4.01         8.94        24.30 
TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3ZE 
       46.78        19.79         1.94         7.89         6.84         3.48 
TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EO TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 
        4.08         3.22        32.78         0.82         2.86         2.24 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GD-A2C5 TCGA-GD-A3OS TCGA-GU-A42P 
        4.50         1.38         1.02         7.69         5.82         6.38 
TCGA-GU-A42Q TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QK 
        7.56         6.41         5.69         7.63         7.79         6.64 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WV 
        6.38         5.33         6.71         4.64 

$`AMP PEAK 13(7P11.2) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
        7.33         6.74        11.93        17.85        19.46         5.06 
TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR 
       14.89         8.61         4.64         8.98         1.94         0.46 
TCGA-CF-A27C TCGA-CU-A0YR TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1AA 
        0.69         7.20         5.19         8.09        31.40         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A3IQ TCGA-DK-A3IT 
        8.91         7.17         5.85         6.64        10.49         5.52 
TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B8 
        8.28        10.55       131.15         0.10         8.32        11.05 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO 
        7.96        32.02        10.98         6.12         6.81         5.49 
TCGA-FD-A3SP TCGA-FJ-A3Z7 TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
        4.54        15.16        49.91        26.50         5.65        26.93 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3OO TCGA-GC-A3WC TCGA-GC-A3YS 
       17.26         7.04        20.12         1.32         2.50         1.08 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3QI 
        2.10         3.12         3.22         4.37         6.15         4.11 
TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        1.51         8.71         3.42 

      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE 
                        6.855                         7.040 
[1] "0.4 - 123.8 (6.9)" "0.1 - 131.2 (7.0)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "AMP PEAK 13(7P11.2) CNV" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK 13(7P11.2) CNV"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"AMP PEAK 13(7P11.2) WILD-TYPE"       "AMP PEAK 13(7P11.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"AMP PEAK 13(7P11.2) WILD-TYPE" "AMP PEAK 13(7P11.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "AMP PEAK 13(7P11.2) CNV" 
[1] "hr=" "1.2"
D13V2, continuous
D13V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 13(7P11.2) CNV         19   54
  AMP PEAK 13(7P11.2) WILD-TYPE   15   46
        clus
vv       AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE
  FEMALE                      19                            15
  MALE                        54                            46
D13V4, continuous
D13V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK 13(7P11.2) CNV       42  2 28
  AMP PEAK 13(7P11.2) WILD-TYPE 35  3 23
D13V6, multiclass
    clus
vv   AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE
  M0                      42                            35
  M1                       2                             3
  MX                      28                            23
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK 13(7P11.2) CNV       37  5 19  4  7
  AMP PEAK 13(7P11.2) WILD-TYPE 38  9  8  1  3
D13V7, multiclass
D13V8, continuous
D13V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 13(7P11.2) CNV             1       20        22       28
  AMP PEAK 13(7P11.2) WILD-TYPE       0       16        22       20
D13V10, multiclass
           clus
vv          AMP PEAK 13(7P11.2) CNV AMP PEAK 13(7P11.2) WILD-TYPE
  STAGE I                         1                             0
  STAGE II                       20                            16
  STAGE III                      22                            22
  STAGE IV                       28                            20

Clustering(14) Variable = Amp Peak 14(8p11.23)
D14V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 14(8P11.23) CNV       31 13
  AMP PEAK 14(8P11.23) WILD-TYPE 62 21
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                            44                             83 
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                            13                             21 
$`AMP PEAK 14(8P11.23) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20N TCGA-BT-A20V TCGA-BT-A2LA TCGA-BT-A2LD 
        2.66         6.74        26.10         5.06         5.88         3.65 
TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1AD TCGA-DK-A2I1 
        2.01         0.69         5.19         2.14       100.47        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3WX 
       75.32         2.20        10.49        37.84        11.51        10.55 
TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SM 
       17.98        36.43         4.01        32.02        24.30         6.12 
TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-FT-A3EE 
       46.78        19.79         1.94         6.84         3.48         3.22 
TCGA-G2-A2ES TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RD 
       17.26        20.12         0.82         2.86         2.24         1.02 
TCGA-GD-A2C5 TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QI TCGA-GV-A40E 
        7.69         4.37         6.41         6.15         4.11         6.38 
TCGA-K4-A3WU TCGA-K4-A3WV 
        3.42         4.64 

$`AMP PEAK 14(8P11.23) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O 
       12.79         7.33         6.58        11.93        19.00        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20W 
       17.85        19.46         5.06        14.89         8.61         8.35 
TCGA-BT-A20X TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS 
        8.25         4.64         8.98         1.94         0.46         0.43 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 
       12.92         4.90         7.20         5.46         8.09         2.53 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE 
       31.40         8.98         7.04         8.91       118.88         7.17 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL 
        5.85         6.64         1.81         7.76       123.85         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY 
        7.82         8.22         5.52         9.67         8.28       131.15 
TCGA-DK-A3X1 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 
       41.03         0.10         8.81         8.32         8.94         6.87 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SL TCGA-FD-A3SN TCGA-FD-A3SO 
       11.05         8.94         7.96        10.98         6.81         5.49 
TCGA-FD-A3SP TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ 
        4.54         7.89        15.16         4.08        49.91        26.50 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A3IB TCGA-GC-A3OO TCGA-GC-A3RB 
        5.65        26.93        32.78         7.04         1.32         4.50 
TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        1.38         2.50         1.08         2.10         3.12         5.82 
TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        6.38         7.56         3.22         5.69         7.63         7.79 
TCGA-GV-A3QK TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS 
        6.64         5.33         1.51         6.71         8.71 

      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                          0.69                           0.10 
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                        100.47                         131.15 
      AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE 
                         6.135                          7.560 
[1] "0.7 - 100.5 (6.1)" "0.1 - 131.2 (7.6)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-K4-A3WV 
      "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-K4-A3WV 
      "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 14(8P11.23) CNV"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 14(8P11.23) CNV" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 14(8P11.23) WILD-TYPE" "AMP PEAK 14(8P11.23) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"AMP PEAK 14(8P11.23) WILD-TYPE"       "AMP PEAK 14(8P11.23) CNV" 
                    TCGA-K4-A3WV 
      "AMP PEAK 14(8P11.23) CNV" 
[1] "hr=" "1"  
D14V2, continuous
D14V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 14(8P11.23) CNV         10   37
  AMP PEAK 14(8P11.23) WILD-TYPE   24   63
        clus
vv       AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE
  FEMALE                       10                             24
  MALE                         37                             63
D14V4, continuous
D14V5, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 14(8P11.23) CNV       24  2 20
  AMP PEAK 14(8P11.23) WILD-TYPE 53  3 31
D14V6, multiclass
    clus
vv   AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE
  M0                       24                             53
  M1                        2                              3
  MX                       20                             31
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 14(8P11.23) CNV       23  5 12  2  4
  AMP PEAK 14(8P11.23) WILD-TYPE 52  9 15  3  6
D14V7, multiclass
D14V8, continuous
D14V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 14(8P11.23) CNV             0       14        12       18
  AMP PEAK 14(8P11.23) WILD-TYPE       1       22        32       30
D14V10, multiclass
           clus
vv          AMP PEAK 14(8P11.23) CNV AMP PEAK 14(8P11.23) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                        14                             22
  STAGE III                       12                             32
  STAGE IV                        18                             30

Clustering(15) Variable = Amp Peak 15(8p11.21)
D15V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 15(8P11.21) CNV       34 10
  AMP PEAK 15(8P11.21) WILD-TYPE 59 24
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                            44                             83 
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                            10                             24 
$`AMP PEAK 15(8P11.21) CNV`
TCGA-BL-A3JM TCGA-BT-A20N TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0F6 
        6.74        26.10         8.35         5.88         3.65         2.01 
TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AD 
        0.69        12.92         5.19        31.40         8.98       100.47 
TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IQ TCGA-DK-A3IS 
       10.59       123.85        75.32         2.20        10.49        37.84 
TCGA-DK-A3IU TCGA-DK-A3WX TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3NA TCGA-FD-A3SJ 
       11.51        10.55        17.98        36.43        32.02        24.30 
TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FT-A3EE 
       46.78        19.79         1.94         7.89         6.84         3.22 
TCGA-G2-A2ES TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GD-A3OS TCGA-GV-A3JV 
       17.26         2.86         2.24         4.50         5.82         4.37 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E 
        6.15         5.69         7.63         7.79         4.11         6.38 
TCGA-K4-A3WS TCGA-K4-A3WU 
        8.71         3.42 

$`AMP PEAK 15(8P11.21) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         2.66         6.58        11.93        19.00 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U 
       12.16        17.85        19.46         5.06        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR 
        5.06         8.25         4.64         8.98         1.94         0.46 
TCGA-CF-A1HS TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 
        0.43         4.90         7.20         5.46         8.09         2.53 
TCGA-DK-A1A5 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF 
        2.14         7.04         8.91       118.88         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
        6.64         1.81         7.76         3.98         7.82         8.22 
TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-E7-A3Y1 
        5.52         9.67         8.28       131.15        41.03         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        8.81         8.32         8.94         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO 
        8.94         7.96        10.98         6.12         6.81         5.49 
TCGA-FD-A3SP TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ 
        4.54        15.16         3.48         4.08        49.91        26.50 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY 
        5.65        26.93        32.78         7.04        20.12         0.82 
TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 
        1.32         1.38         1.02         2.50         1.08         7.69 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JW 
        2.10         3.12         6.38         7.56         3.22         6.41 
TCGA-GV-A3QK TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WV 
        6.64         5.33         1.51         6.71         4.64 

      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                          0.69                           0.10 
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                        123.85                         131.15 
      AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE 
                          7.84                           6.81 
[1] "0.7 - 123.8 (7.8)" "0.1 - 131.2 (6.8)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-K4-A3WV 
"AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-K4-A3WV 
"AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"AMP PEAK 15(8P11.21) WILD-TYPE"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 15(8P11.21) CNV" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 15(8P11.21) WILD-TYPE" "AMP PEAK 15(8P11.21) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 15(8P11.21) CNV"       "AMP PEAK 15(8P11.21) CNV" 
                    TCGA-K4-A3WV 
"AMP PEAK 15(8P11.21) WILD-TYPE" 
[1] "hr=" "2.1"
D15V2, continuous
D15V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 15(8P11.21) CNV          8   38
  AMP PEAK 15(8P11.21) WILD-TYPE   26   62
        clus
vv       AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE
  FEMALE                        8                             26
  MALE                         38                             62
D15V4, continuous
D15V5, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 15(8P11.21) CNV       25  0 21
  AMP PEAK 15(8P11.21) WILD-TYPE 52  5 30
D15V6, multiclass
    clus
vv   AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE
  M0                       25                             52
  M1                        0                              5
  MX                       21                             30
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 15(8P11.21) CNV       25  6 10  2  3
  AMP PEAK 15(8P11.21) WILD-TYPE 50  8 17  3  7
D15V7, multiclass
D15V8, continuous
D15V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 15(8P11.21) CNV             0       11        15       17
  AMP PEAK 15(8P11.21) WILD-TYPE       1       25        29       31
D15V10, multiclass
           clus
vv          AMP PEAK 15(8P11.21) CNV AMP PEAK 15(8P11.21) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                        11                             25
  STAGE III                       15                             29
  STAGE IV                        17                             31

Clustering(16) Variable = Amp Peak 16(8q22.3)
D16V1, survival
                               sevent
clus2                            0  1
  AMP PEAK 16(8Q22.3) CNV       62 20
  AMP PEAK 16(8Q22.3) WILD-TYPE 31 14
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                           82                            45 
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                           20                            14 
$`AMP PEAK 16(8Q22.3) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20T 
       12.79         2.66         6.74        19.00        26.10        14.89 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ 
        5.06         8.35         8.25         5.88         3.65         8.98 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YR 
        1.94         2.01         0.43         0.69        12.92         7.20 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 
        5.46         5.19         2.53         2.14        31.40         8.98 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 
      118.88       100.47         7.17        10.59       123.85        75.32 
TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT 
        2.20         7.82         8.22        10.49        37.84         5.52 
TCGA-DK-A3IU TCGA-DK-A3WX TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B5 
       11.51        10.55        41.03        17.98        36.43         8.94 
TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SP 
        6.87         4.01         7.96        32.02        24.30         4.54 
TCGA-FD-A3SQ TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FT-A3EE 
       46.78         7.89         6.84        15.16         3.48         3.22 
TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM 
        5.65        32.78        17.26        20.12         0.82         2.86 
TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP 
        2.24         4.50         1.02         2.50         1.08         2.10 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW 
        3.12         5.82         6.38         3.22         4.37         6.41 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E 
        6.15         5.69         7.63         7.79         4.11         6.38 
TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        1.51         6.71         8.71         3.42 

$`AMP PEAK 16(8Q22.3) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q 
        7.33         6.58        11.93        12.16        17.85        19.46 
TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CU-A0YO TCGA-CU-A3YL 
        5.06         8.61         4.64         0.46         4.90         8.09 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 
        7.04         8.91         5.85         6.64         1.81         7.76 
TCGA-DK-A3IL TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 
        3.98         9.67         8.28       131.15         0.10         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        8.32        11.05         8.94        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ 
        5.49        19.79         1.94         4.08        49.91        26.50 
TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GD-A2C5 TCGA-GU-A42Q 
       26.93         7.04         1.32         1.38         7.69         7.56 
TCGA-GV-A3QK TCGA-GV-A40G TCGA-K4-A3WV 
        6.64         5.33         4.64 

      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                         0.43                          0.10 
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                       123.85                        131.15 
      AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE 
                         6.79                          7.33 
[1] "0.4 - 123.8 (6.8)" "0.1 - 131.2 (7.3)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-K4-A3WV 
"AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-K4-A3WV 
"AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"AMP PEAK 16(8Q22.3) WILD-TYPE" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"AMP PEAK 16(8Q22.3) WILD-TYPE"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "AMP PEAK 16(8Q22.3) CNV" "AMP PEAK 16(8Q22.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "AMP PEAK 16(8Q22.3) CNV"       "AMP PEAK 16(8Q22.3) CNV" 
                   TCGA-K4-A3WV 
"AMP PEAK 16(8Q22.3) WILD-TYPE" 
[1] "hr=" "1.5"
D16V2, continuous
D16V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 16(8Q22.3) CNV         17   68
  AMP PEAK 16(8Q22.3) WILD-TYPE   17   32
        clus
vv       AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE
  FEMALE                      17                            17
  MALE                        68                            32
D16V4, continuous
D16V5, continuous
                               vv
clus                            M0 M1 MX
  AMP PEAK 16(8Q22.3) CNV       47  3 34
  AMP PEAK 16(8Q22.3) WILD-TYPE 30  2 17
D16V6, multiclass
    clus
vv   AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE
  M0                      47                            30
  M1                       3                             2
  MX                      34                            17
                               vv
clus                            N0 N1 N2 N3 NX
  AMP PEAK 16(8Q22.3) CNV       46 12 16  2  7
  AMP PEAK 16(8Q22.3) WILD-TYPE 29  2 11  3  3
D16V7, multiclass
D16V8, continuous
D16V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 16(8Q22.3) CNV             1       22        28       30
  AMP PEAK 16(8Q22.3) WILD-TYPE       0       14        16       18
D16V10, multiclass
           clus
vv          AMP PEAK 16(8Q22.3) CNV AMP PEAK 16(8Q22.3) WILD-TYPE
  STAGE I                         1                             0
  STAGE II                       22                            14
  STAGE III                      28                            16
  STAGE IV                       30                            18

Clustering(17) Variable = Amp Peak 17(8q24.21)
D17V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 17(8Q24.21) CNV       60 19
  AMP PEAK 17(8Q24.21) WILD-TYPE 33 15
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                            79                             48 
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                            19                             15 
$`AMP PEAK 17(8Q24.21) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N 
       12.79         2.66         6.74        11.93        19.00        26.10 
TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0EZ 
       14.89         5.06         8.35         8.25         5.88         8.98 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YR 
        1.94         2.01         0.43         0.69        12.92         7.20 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 
        5.46         5.19         2.53         2.14        31.40         8.98 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 
      118.88       100.47         7.17        10.59       123.85        75.32 
TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT 
        2.20         7.82         8.22        10.49        37.84         5.52 
TCGA-DK-A3IU TCGA-DK-A3WX TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B6 
       11.51        10.55        41.03        17.98        36.43         6.87 
TCGA-FD-A3B7 TCGA-FD-A3N6 TCGA-FD-A3SJ TCGA-FD-A3SQ TCGA-FD-A43N TCGA-FD-A43U 
        4.01         7.96        24.30        46.78         7.89         6.84 
TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EK TCGA-G2-A2EO 
        3.48         4.08         3.22        49.91         5.65        32.78 
TCGA-G2-A2ES TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB 
       17.26        20.12         0.82         2.86         2.24         4.50 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        1.02         2.50         1.08         2.10         3.12         5.82 
TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ 
        6.38         7.56         4.37         6.41         6.15         5.69 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E TCGA-H4-A2HQ TCGA-K4-A3WS 
        7.63         7.79         4.11         6.38         6.71         8.71 
TCGA-K4-A3WU 
        3.42 

$`AMP PEAK 17(8Q24.21) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
        7.33         6.58        12.16        17.85        19.46         5.06 
TCGA-BT-A20U TCGA-BT-A2LD TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CU-A0YO TCGA-CU-A3YL 
        8.61         3.65         4.64         0.46         4.90         8.09 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 
        7.04         8.91         5.85         6.64         1.81         7.76 
TCGA-DK-A3IL TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 
        3.98         9.67         8.28       131.15         0.10         8.81 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SL 
        8.32         8.94        11.05         8.94        32.02        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A3SS 
        6.12         6.81         5.49         4.54        19.79         1.94 
TCGA-FJ-A3Z7 TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3OO TCGA-GC-A3RC 
       15.16        26.50        26.93         7.04         1.32         1.38 
TCGA-GD-A2C5 TCGA-GU-A42R TCGA-GV-A3QK TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WV 
        7.69         3.22         6.64         5.33         1.51         4.64 

      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                          0.43                           0.10 
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                        123.85                         131.15 
      AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE 
                          6.87                           7.04 
[1] "0.4 - 123.8 (6.9)" "0.1 - 131.2 (7.0)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-K4-A3WV 
"AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-K4-A3WV 
"AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 17(8Q24.21) WILD-TYPE" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 17(8Q24.21) CNV" "AMP PEAK 17(8Q24.21) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 17(8Q24.21) WILD-TYPE"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 17(8Q24.21) CNV"       "AMP PEAK 17(8Q24.21) CNV" 
                    TCGA-K4-A3WV 
"AMP PEAK 17(8Q24.21) WILD-TYPE" 
[1] "hr=" "1.6"
D17V2, continuous
D17V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 17(8Q24.21) CNV         17   66
  AMP PEAK 17(8Q24.21) WILD-TYPE   17   34
        clus
vv       AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE
  FEMALE                       17                             17
  MALE                         66                             34
D17V4, continuous
D17V5, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 17(8Q24.21) CNV       51  3 28
  AMP PEAK 17(8Q24.21) WILD-TYPE 26  2 23
D17V6, multiclass
    clus
vv   AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE
  M0                       51                             26
  M1                        3                              2
  MX                       28                             23
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 17(8Q24.21) CNV       48 10 15  2  7
  AMP PEAK 17(8Q24.21) WILD-TYPE 27  4 12  3  3
D17V7, multiclass
D17V8, continuous
D17V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 17(8Q24.21) CNV             1       22        29       27
  AMP PEAK 17(8Q24.21) WILD-TYPE       0       14        15       21
D17V10, multiclass
           clus
vv          AMP PEAK 17(8Q24.21) CNV AMP PEAK 17(8Q24.21) WILD-TYPE
  STAGE I                          1                              0
  STAGE II                        22                             14
  STAGE III                       29                             15
  STAGE IV                        27                             21

Clustering(18) Variable = Amp Peak 18(10p15.1)
D18V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 18(10P15.1) CNV       36 18
  AMP PEAK 18(10P15.1) WILD-TYPE 57 16
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                            54                             73 
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                            18                             16 
$`AMP PEAK 18(10P15.1) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A20N TCGA-BT-A20Q TCGA-BT-A20R 
       12.79         2.66         6.58        26.10        19.46         5.06 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F6 
        5.06         8.35         3.65         4.64         8.98         2.01 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 
        0.43        12.92         5.46         5.19         2.53         2.14 
TCGA-DK-A1A6 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I6 
       31.40       118.88       100.47         1.81        10.59        75.32 
TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IV TCGA-DK-A3X1 TCGA-FD-A3B3 
        3.98         7.82         8.22         9.67        41.03         8.81 
TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SR 
        8.94         6.87         8.94        32.02        24.30        19.79 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EO TCGA-G2-A2ES 
        1.94         7.89        15.16         3.22        32.78        17.26 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GD-A2C5 TCGA-GD-A3OS 
       20.12         0.82         4.50         1.02         7.69         5.82 
TCGA-GU-A42P TCGA-GV-A3JW TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40E TCGA-K4-A3WS 
        6.38         6.41         7.63         7.79         6.38         8.71 

$`AMP PEAK 18(10P15.1) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O TCGA-BT-A20P 
        7.33         6.74        11.93        19.00        12.16        17.85 
TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-CF-A1HR 
       14.89         8.61         8.25         5.88         1.94         0.46 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A7 TCGA-DK-A1AA 
        0.69         4.90         7.20         8.09         8.98         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I2 TCGA-DK-A2I4 
        8.91         7.17         5.85         6.64         7.76       123.85 
TCGA-DK-A3IK TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WW 
        2.20        10.49        37.84         5.52        11.51         8.28 
TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B4 
       10.55       131.15        17.98        36.43         0.10         8.32 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
        4.01        11.05         7.96        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-FJ-A3ZF 
        5.49         4.54        46.78         6.84         3.48         4.08 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM 
       49.91        26.50         5.65        26.93         7.04         2.86 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP 
        2.24         1.32         1.38         2.50         1.08         2.10 
TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ 
        3.12         7.56         3.22         4.37         6.15         5.69 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WU 
        4.11         6.64         5.33         1.51         6.71         3.42 
TCGA-K4-A3WV 
        4.64 

      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                          0.43                           0.10 
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                        118.88                         131.15 
      AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE 
                         7.805                          6.740 
[1] "0.4 - 118.9 (7.8)" "0.1 - 131.2 (6.7)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
"AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
"AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"AMP PEAK 18(10P15.1) WILD-TYPE"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 18(10P15.1) CNV"       "AMP PEAK 18(10P15.1) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 18(10P15.1) WILD-TYPE" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 18(10P15.1) CNV" "AMP PEAK 18(10P15.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
"AMP PEAK 18(10P15.1) WILD-TYPE" 
[1] "hr=" "1.2"
D18V2, continuous
D18V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 18(10P15.1) CNV         15   42
  AMP PEAK 18(10P15.1) WILD-TYPE   19   58
        clus
vv       AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE
  FEMALE                       15                             19
  MALE                         42                             58
D18V4, continuous
D18V5, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 18(10P15.1) CNV       32  1 23
  AMP PEAK 18(10P15.1) WILD-TYPE 45  4 28
D18V6, multiclass
    clus
vv   AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE
  M0                       32                             45
  M1                        1                              4
  MX                       23                             28
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 18(10P15.1) CNV       26  8 14  1  7
  AMP PEAK 18(10P15.1) WILD-TYPE 49  6 13  4  3
D18V7, multiclass
D18V8, continuous
D18V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 18(10P15.1) CNV             1       15        17       22
  AMP PEAK 18(10P15.1) WILD-TYPE       0       21        27       26
D18V10, multiclass
           clus
vv          AMP PEAK 18(10P15.1) CNV AMP PEAK 18(10P15.1) WILD-TYPE
  STAGE I                          1                              0
  STAGE II                        15                             21
  STAGE III                       17                             27
  STAGE IV                        22                             26

Clustering(19) Variable = Amp Peak 19(11q13.3)
D19V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 19(11Q13.3) CNV       38 13
  AMP PEAK 19(11Q13.3) WILD-TYPE 55 21
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                            51                             76 
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                            13                             21 
$`AMP PEAK 19(11Q13.3) CNV`
TCGA-BL-A13J TCGA-BT-A20N TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HS 
        2.66        26.10         5.88         4.64         2.01         0.43 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1A3 TCGA-DK-A1A5 
       12.92         4.90         7.20         5.46         2.53         2.14 
TCGA-DK-A1A6 TCGA-DK-A1AF TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IL 
       31.40         5.85        10.59         7.76        75.32         3.98 
TCGA-DK-A3IM TCGA-DK-A3IQ TCGA-DK-A3WX TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC 
        7.82        10.49        10.55        41.03        17.98        36.43 
TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A43N 
        8.94         6.87         4.01        32.02        24.30         7.89 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3I6 
        6.84        15.16        17.26         7.04        20.12         2.24 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GD-A2C5 TCGA-GD-A3OS TCGA-GV-A3JV TCGA-GV-A3JW 
        1.38         1.02         7.69         5.82         4.37         6.41 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        5.69         7.63         7.79         4.11         6.64         6.38 
TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WV 
        5.33         6.71         4.64 

$`AMP PEAK 19(11Q13.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         6.74         6.58        11.93        19.00 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U 
       12.16        17.85        19.46         5.06        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 
        5.06         8.35         8.25         3.65         8.98         1.94 
TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A7 TCGA-DK-A1AA 
        0.46         0.69         5.19         8.09         8.98         7.04 
TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AG TCGA-DK-A2HX 
        8.91       118.88       100.47         7.17         6.64         1.81 
TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IN TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
      123.85         2.20         8.22        37.84         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 
        9.67         8.28       131.15         0.10         8.81         8.32 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
       11.05         8.94         7.96        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZE 
        5.49         4.54        46.78        19.79         1.94         3.48 
TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
        4.08         3.22        49.91        26.50         5.65        26.93 
TCGA-G2-A2EO TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3WC 
       32.78         0.82         2.86         1.32         4.50         2.50 
TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R 
        1.08         2.10         3.12         6.38         7.56         3.22 
TCGA-GV-A3JX TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        6.15         1.51         8.71         3.42 

      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                          0.43                           0.10 
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                         75.32                         131.15 
      AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE 
                          6.84                           7.25 
[1] "0.4 - 75.3 (6.8)"  "0.1 - 131.2 (7.2)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
      "AMP PEAK 19(11Q13.3) CNV" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 19(11Q13.3) CNV"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 19(11Q13.3) WILD-TYPE"       "AMP PEAK 19(11Q13.3) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"AMP PEAK 19(11Q13.3) WILD-TYPE" "AMP PEAK 19(11Q13.3) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "AMP PEAK 19(11Q13.3) CNV" 
[1] "hr=" "1"  
D19V2, continuous
D19V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 19(11Q13.3) CNV         15   38
  AMP PEAK 19(11Q13.3) WILD-TYPE   19   62
        clus
vv       AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE
  FEMALE                       15                             19
  MALE                         38                             62
D19V4, continuous
D19V5, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 19(11Q13.3) CNV       26  1 26
  AMP PEAK 19(11Q13.3) WILD-TYPE 51  4 25
D19V6, multiclass
    clus
vv   AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE
  M0                       26                             51
  M1                        1                              4
  MX                       26                             25
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 19(11Q13.3) CNV       24  5 15  2  7
  AMP PEAK 19(11Q13.3) WILD-TYPE 51  9 12  3  3
D19V7, multiclass
D19V8, continuous
D19V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 19(11Q13.3) CNV             0       15        14       22
  AMP PEAK 19(11Q13.3) WILD-TYPE       1       21        30       26
D19V10, multiclass
           clus
vv          AMP PEAK 19(11Q13.3) CNV AMP PEAK 19(11Q13.3) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                        15                             21
  STAGE III                       14                             30
  STAGE IV                        22                             26

Clustering(20) Variable = Amp Peak 20(12q15)
D20V1, survival
                              sevent
clus2                           0  1
  AMP PEAK 20(12Q15) CNV       27 12
  AMP PEAK 20(12Q15) WILD-TYPE 66 22
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                          39                           88 
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                          12                           22 
$`AMP PEAK 20(12Q15) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N 
       12.79         2.66         6.74         6.58        19.00        26.10 
TCGA-BT-A20P TCGA-BT-A20R TCGA-BT-A20V TCGA-BT-A20X TCGA-C4-A0F6 TCGA-CU-A0YO 
       17.85         5.06         5.06         8.25         2.01         4.90 
TCGA-CU-A0YR TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC 
        7.20         2.53         2.14        31.40         8.98       118.88 
TCGA-DK-A2I4 TCGA-DK-A3IS TCGA-DK-A3WX TCGA-FJ-A3Z7 TCGA-G2-A2EF TCGA-G2-A2EK 
      123.85        37.84        10.55        15.16        49.91         5.65 
TCGA-G2-A2EO TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RD TCGA-GU-A42R 
       32.78         0.82         2.86         2.24         1.02         3.22 
TCGA-GV-A3JW TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO 
        6.41         7.79         4.11         6.64         6.38         1.51 
TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        6.71         3.42         4.64 

$`AMP PEAK 20(12Q15) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U 
        7.33        11.93        12.16        19.46        14.89         8.61 
TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 
        8.35         5.88         3.65         4.64         8.98         1.94 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3QU 
        0.46         0.43         0.69        12.92         5.46         5.19 
TCGA-CU-A3YL TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
        8.09         7.04         8.91       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IK 
        6.64         1.81        10.59         7.76        75.32         2.20 
TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IU 
        3.98         7.82         8.22        10.49         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC 
        9.67         8.28       131.15        41.03        17.98        36.43 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 
        0.10         8.81         8.32         8.94         6.87         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL 
       11.05         8.94         7.96        32.02        24.30        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR 
        6.12         6.81         5.49         4.54        46.78        19.79 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE 
        1.94         7.89         6.84         3.48         4.08         3.22 
TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3OO 
       26.50        26.93        17.26         7.04        20.12         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP 
        4.50         1.38         2.50         1.08         7.69         2.10 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3JX 
        3.12         5.82         6.38         7.56         4.37         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A40G TCGA-K4-A3WS 
        5.69         7.63         5.33         8.71 

      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                        0.82                         0.10 
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                      123.85                       131.15 
      AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE 
                       6.580                        7.445 
[1] "0.8 - 123.8 (6.6)" "0.1 - 131.2 (7.4)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-K4-A3WV 
      "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-K4-A3WV 
      "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"AMP PEAK 20(12Q15) WILD-TYPE" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "AMP PEAK 20(12Q15) CNV" "AMP PEAK 20(12Q15) WILD-TYPE" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
      "AMP PEAK 20(12Q15) CNV"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"AMP PEAK 20(12Q15) WILD-TYPE"       "AMP PEAK 20(12Q15) CNV" 
                  TCGA-K4-A3WV 
      "AMP PEAK 20(12Q15) CNV" 
[1] "hr=" "1.1"
D20V2, continuous
D20V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 20(12Q15) CNV         10   34
  AMP PEAK 20(12Q15) WILD-TYPE   24   66
        clus
vv       AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE
  FEMALE                     10                           24
  MALE                       34                           66
D20V4, continuous
D20V5, continuous
                              vv
clus                           M0 M1 MX
  AMP PEAK 20(12Q15) CNV       28  1 14
  AMP PEAK 20(12Q15) WILD-TYPE 49  4 37
D20V6, multiclass
    clus
vv   AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE
  M0                     28                           49
  M1                      1                            4
  MX                     14                           37
                              vv
clus                           N0 N1 N2 N3 NX
  AMP PEAK 20(12Q15) CNV       25  2 10  0  5
  AMP PEAK 20(12Q15) WILD-TYPE 50 12 17  5  5
D20V7, multiclass
D20V8, continuous
D20V9, continuous
                              vv
clus                           STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 20(12Q15) CNV             1       15        14       12
  AMP PEAK 20(12Q15) WILD-TYPE       0       21        30       36
D20V10, multiclass
           clus
vv          AMP PEAK 20(12Q15) CNV AMP PEAK 20(12Q15) WILD-TYPE
  STAGE I                        1                            0
  STAGE II                      15                           21
  STAGE III                     14                           30
  STAGE IV                      12                           36

Clustering(21) Variable = Amp Peak 21(13q34)
D21V1, survival
                              sevent
clus2                           0  1
  AMP PEAK 21(13Q34) CNV       36 13
  AMP PEAK 21(13Q34) WILD-TYPE 57 21
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                          49                           78 
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                          13                           21 
$`AMP PEAK 21(13Q34) CNV`
TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A2LD 
        6.74         6.58        19.46         8.61         8.35         3.65 
TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR 
        8.98         1.94         0.46         0.43        12.92         7.20 
TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A2HX TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS 
        5.19         8.09         1.81         3.98        10.49        37.84 
TCGA-DK-A3IU TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B6 
       11.51        41.03        17.98        36.43         8.32         6.87 
TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SQ 
        4.01         8.94        24.30         6.12         6.81        46.78 
TCGA-FD-A3SR TCGA-FJ-A3ZE TCGA-G2-A2EF TCGA-G2-A2EK TCGA-G2-A2EL TCGA-GC-A3OO 
       19.79         3.48        49.91         5.65        26.93         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42P 
        4.50         1.38         2.50         2.10         5.82         6.38 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK 
        6.15         5.69         7.63         7.79         4.11         6.64 
TCGA-K4-A3WV 
        4.64 

$`AMP PEAK 21(13Q34) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N 
       12.79         7.33         2.66        11.93        19.00        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20X 
       12.16        17.85         5.06        14.89         5.06         8.25 
TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A3KJ 
        5.88         4.64         2.01         0.69         4.90         5.46 
TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB 
        2.53         2.14        31.40         8.98         7.04         8.91 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 
      118.88       100.47         7.17         5.85         6.64        10.59 
TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IN 
        7.76       123.85        75.32         2.20         7.82         8.22 
TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
        5.52         9.67         8.28        10.55       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL 
        8.81         8.94        11.05         7.96        32.02        10.98 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
        5.49         4.54         1.94         7.89         6.84        15.16 
TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB 
        4.08         3.22        26.50        32.78        17.26         7.04 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RD TCGA-GC-A3YS 
       20.12         0.82         2.86         2.24         1.02         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW 
        7.69         3.12         7.56         3.22         4.37         6.41 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        6.38         5.33         1.51         6.71         8.71         3.42 

      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                        0.43                         0.10 
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                       49.91                       131.15 
      AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE 
                        6.74                         7.25 
[1] "0.4 - 49.9 (6.7)"  "0.1 - 131.2 (7.2)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-K4-A3WV 
      "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-K4-A3WV 
      "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
"AMP PEAK 21(13Q34) WILD-TYPE"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "AMP PEAK 21(13Q34) CNV" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
      "AMP PEAK 21(13Q34) CNV"       "AMP PEAK 21(13Q34) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"AMP PEAK 21(13Q34) WILD-TYPE" "AMP PEAK 21(13Q34) WILD-TYPE" 
                  TCGA-K4-A3WV 
      "AMP PEAK 21(13Q34) CNV" 
[1] "hr=" "1"  
D21V2, continuous
D21V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 21(13Q34) CNV         14   38
  AMP PEAK 21(13Q34) WILD-TYPE   20   62
        clus
vv       AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE
  FEMALE                     14                           20
  MALE                       38                           62
D21V4, continuous
D21V5, continuous
                              vv
clus                           M0 M1 MX
  AMP PEAK 21(13Q34) CNV       29  3 20
  AMP PEAK 21(13Q34) WILD-TYPE 48  2 31
D21V6, multiclass
    clus
vv   AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE
  M0                     29                           48
  M1                      3                            2
  MX                     20                           31
                              vv
clus                           N0 N1 N2 N3 NX
  AMP PEAK 21(13Q34) CNV       30  5 12  3  2
  AMP PEAK 21(13Q34) WILD-TYPE 45  9 15  2  8
D21V7, multiclass
D21V8, continuous
D21V9, continuous
                              vv
clus                           STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 21(13Q34) CNV             0       16        13       21
  AMP PEAK 21(13Q34) WILD-TYPE       1       20        31       27
D21V10, multiclass
           clus
vv          AMP PEAK 21(13Q34) CNV AMP PEAK 21(13Q34) WILD-TYPE
  STAGE I                        0                            1
  STAGE II                      16                           20
  STAGE III                     13                           31
  STAGE IV                      21                           27

Clustering(22) Variable = Amp Peak 22(16p12.1)
D22V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 22(16P12.1) CNV       24 13
  AMP PEAK 22(16P12.1) WILD-TYPE 69 21
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                            37                             90 
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                            13                             21 
$`AMP PEAK 22(16P12.1) CNV`
TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A20R TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LA 
        2.66         6.58         5.06         5.06         8.25         5.88 
TCGA-C4-A0EZ TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1AC TCGA-DK-A2I1 TCGA-DK-A2I2 
        8.98        12.92         5.19       118.88        10.59         7.76 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IS TCGA-DK-A3IV TCGA-DK-A3X1 
        2.20         3.98         7.82        37.84         9.67        41.03 
TCGA-E5-A2PC TCGA-FD-A3B6 TCGA-FD-A3SJ TCGA-FD-A3SR TCGA-FD-A43U TCGA-FJ-A3ZE 
       36.43         6.87        24.30        19.79         6.84         3.48 
TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EO TCGA-G2-A3IE TCGA-GC-A3BM TCGA-GC-A3I6 
        3.22        49.91        32.78        20.12         2.86         2.24 
TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-H4-A2HQ TCGA-K4-A3WS 
        6.38         4.37         6.41         5.69         6.71         8.71 
TCGA-K4-A3WU 
        3.42 

$`AMP PEAK 22(16P12.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N 
       12.79         7.33         6.74        11.93        19.00        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20W 
       12.16        17.85        19.46        14.89         8.61         8.35 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS 
        3.65         4.64         1.94         2.01         0.46         0.43 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 
        0.69         4.90         7.20         5.46         8.09         2.53 
TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD 
        2.14        31.40         8.98         7.04         8.91       100.47 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I4 TCGA-DK-A2I6 
        7.17         5.85         6.64         1.81       123.85        75.32 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX 
        8.22        10.49         5.52        11.51         8.28        10.55 
TCGA-DK-A3WY TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 
      131.15        17.98         0.10         8.81         8.32         8.94 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL 
        4.01        11.05         8.94         7.96        32.02        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SS 
        6.12         6.81         5.49         4.54        46.78         1.94 
TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
        7.89        15.16         4.08        26.50         5.65        26.93 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC 
       17.26         7.04         0.82         1.32         4.50         1.38 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
        1.02         2.50         1.08         7.69         2.10         3.12 
TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QH 
        5.82         7.56         3.22         6.15         7.63         7.79 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WV 
        4.11         6.64         6.38         5.33         1.51         4.64 

      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                           2.2                            0.1 
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                        118.88                         131.15 
      AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE 
                         6.840                          7.105 
[1] "2.2 - 118.9 (6.8)" "0.1 - 131.2 (7.1)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-K4-A3WV 
"AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-K4-A3WV 
"AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "AMP PEAK 22(16P12.1) CNV" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"AMP PEAK 22(16P12.1) WILD-TYPE" "AMP PEAK 22(16P12.1) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 22(16P12.1) WILD-TYPE"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "AMP PEAK 22(16P12.1) CNV"       "AMP PEAK 22(16P12.1) CNV" 
                    TCGA-K4-A3WV 
"AMP PEAK 22(16P12.1) WILD-TYPE" 
[1] "hr=" "1.2"
D22V2, continuous
D22V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 22(16P12.1) CNV         10   27
  AMP PEAK 22(16P12.1) WILD-TYPE   24   73
        clus
vv       AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE
  FEMALE                       10                             24
  MALE                         27                             73
D22V4, continuous
D22V5, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 22(16P12.1) CNV       21  3 13
  AMP PEAK 22(16P12.1) WILD-TYPE 56  2 38
D22V6, multiclass
    clus
vv   AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE
  M0                       21                             56
  M1                        3                              2
  MX                       13                             38
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 22(16P12.1) CNV       16  6  8  3  4
  AMP PEAK 22(16P12.1) WILD-TYPE 59  8 19  2  6
D22V7, multiclass
D22V8, continuous
D22V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 22(16P12.1) CNV             0        8        10       18
  AMP PEAK 22(16P12.1) WILD-TYPE       1       28        34       30
D22V10, multiclass
           clus
vv          AMP PEAK 22(16P12.1) CNV AMP PEAK 22(16P12.1) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                         8                             28
  STAGE III                       10                             34
  STAGE IV                        18                             30

Clustering(23) Variable = Amp Peak 23(17q11.2)
D23V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 23(17Q11.2) CNV       41 19
  AMP PEAK 23(17Q11.2) WILD-TYPE 52 15
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                            60                             67 
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                            19                             15 
$`AMP PEAK 23(17Q11.2) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
        2.66         6.74         6.58        17.85        19.46         5.06 
TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
       14.89         8.61         8.35         3.65         4.64         8.98 
TCGA-CF-A1HR TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 
        0.46         7.20         8.09         2.14        31.40         8.98 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A3IK TCGA-DK-A3IM 
      118.88       100.47        10.59         7.76         2.20         7.82 
TCGA-DK-A3IS TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3B6 
       37.84        41.03        17.98        36.43         8.94         6.87 
TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43N 
        8.94        32.02        24.30         4.54        46.78         7.89 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EO TCGA-G2-A3IE TCGA-G2-A3VY 
        6.84        15.16         3.22        32.78        20.12         0.82 
TCGA-GC-A3RB TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42R 
        4.50         1.08         7.69         2.10         6.38         3.22 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI 
        4.37         6.41         5.69         7.63         7.79         4.11 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        6.64         6.38         5.33         6.71         3.42         4.64 

$`AMP PEAK 23(17Q11.2) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O 
       12.79         7.33        11.93        19.00        26.10        12.16 
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS 
        5.06         8.25         5.88         1.94         2.01         0.43 
TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 
        0.69        12.92         4.90         5.46         5.19         2.53 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX 
        7.04         8.91         7.17         5.85         6.64         1.81 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT 
      123.85        75.32         3.98         8.22        10.49         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
       11.51         9.67         8.28        10.55       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3SL 
        8.81         8.32         4.01        11.05         7.96        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZE 
        6.12         6.81         5.49        19.79         1.94         3.48 
TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES 
        4.08        49.91        26.50         5.65        26.93        17.26 
TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GC-A3RD 
        7.04         2.86         2.24         1.32         1.38         1.02 
TCGA-GC-A3WC TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GV-A3JX TCGA-H4-A2HO 
        2.50         3.12         5.82         7.56         6.15         1.51 
TCGA-K4-A3WS 
        8.71 

      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                          0.46                           0.10 
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                        118.88                         131.15 
      AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE 
                         7.415                          6.810 
[1] "0.5 - 118.9 (7.4)" "0.1 - 131.2 (6.8)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-K4-A3WV 
      "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-K4-A3WV 
      "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"AMP PEAK 23(17Q11.2) WILD-TYPE" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "AMP PEAK 23(17Q11.2) CNV" "AMP PEAK 23(17Q11.2) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "AMP PEAK 23(17Q11.2) CNV"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"AMP PEAK 23(17Q11.2) WILD-TYPE"       "AMP PEAK 23(17Q11.2) CNV" 
                    TCGA-K4-A3WV 
      "AMP PEAK 23(17Q11.2) CNV" 
[1] "hr=" "1.1"
D23V2, continuous
D23V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 23(17Q11.2) CNV         16   48
  AMP PEAK 23(17Q11.2) WILD-TYPE   18   52
        clus
vv       AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE
  FEMALE                       16                             18
  MALE                         48                             52
D23V4, continuous
D23V5, continuous
                                vv
clus                             M0 M1 MX
  AMP PEAK 23(17Q11.2) CNV       31  2 30
  AMP PEAK 23(17Q11.2) WILD-TYPE 46  3 21
D23V6, multiclass
    clus
vv   AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE
  M0                       31                             46
  M1                        2                              3
  MX                       30                             21
                                vv
clus                             N0 N1 N2 N3 NX
  AMP PEAK 23(17Q11.2) CNV       28 10 17  2  5
  AMP PEAK 23(17Q11.2) WILD-TYPE 47  4 10  3  5
D23V7, multiclass
D23V8, continuous
D23V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 23(17Q11.2) CNV             0       17        15       29
  AMP PEAK 23(17Q11.2) WILD-TYPE       1       19        29       19
D23V10, multiclass
           clus
vv          AMP PEAK 23(17Q11.2) CNV AMP PEAK 23(17Q11.2) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                        17                             19
  STAGE III                       15                             29
  STAGE IV                        29                             19

Clustering(24) Variable = Amp Peak 24(17q12)
D24V1, survival
                              sevent
clus2                           0  1
  AMP PEAK 24(17Q12) CNV       34 20
  AMP PEAK 24(17Q12) WILD-TYPE 59 14
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                          54                           73 
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                          20                           14 
$`AMP PEAK 24(17Q12) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20O TCGA-BT-A20P 
       12.79         2.66         6.74         6.58        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD 
       19.46         5.06         8.61         8.35         8.25         3.65 
TCGA-C4-A0EZ TCGA-CF-A1HR TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 
        8.98         0.46         7.20         8.09         2.14        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AD TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IM 
        8.98       100.47        10.59         7.76        75.32         7.82 
TCGA-DK-A3IS TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3B6 
       37.84        41.03        17.98        36.43         8.94         6.87 
TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43U 
        4.01        32.02        24.30         4.54        46.78         6.84 
TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A3IE TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42R 
       15.16         3.22        20.12         2.10         6.38         3.22 
TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK 
        4.37         5.69         7.63         7.79         4.11         6.64 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        6.38         5.33         1.51         6.71         3.42         4.64 

$`AMP PEAK 24(17Q12) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A20V 
        7.33        11.93        19.00        26.10        14.89         5.06 
TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CF-A27C 
        5.88         4.64         1.94         2.01         0.43         0.69 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1AA 
       12.92         4.90         5.46         5.19         2.53         7.04 
TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX 
        8.91       118.88         7.17         5.85         6.64         1.81 
TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT 
      123.85         2.20         3.98         8.22        10.49         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 
       11.51         9.67         8.28        10.55       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SL 
        8.81         8.32        11.05         8.94         7.96        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N 
        6.12         6.81         5.49        19.79         1.94         7.89 
TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
        3.48         4.08        49.91        26.50         5.65        26.93 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 
       32.78        17.26         7.04         0.82         2.86         2.24 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS 
        1.32         4.50         1.38         1.02         2.50         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GV-A3JW TCGA-GV-A3JX 
        7.69         3.12         5.82         7.56         6.41         6.15 
TCGA-K4-A3WS 
        8.71 

      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                        0.46                         0.10 
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                      100.47                       131.15 
      AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE 
                       7.695                        6.640 
[1] "0.5 - 100.5 (7.7)" "0.1 - 131.2 (6.6)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-K4-A3WV 
      "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-K4-A3WV 
      "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"AMP PEAK 24(17Q12) WILD-TYPE" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
      "AMP PEAK 24(17Q12) CNV" "AMP PEAK 24(17Q12) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
      "AMP PEAK 24(17Q12) CNV"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"AMP PEAK 24(17Q12) WILD-TYPE"       "AMP PEAK 24(17Q12) CNV" 
                  TCGA-K4-A3WV 
      "AMP PEAK 24(17Q12) CNV" 
[1] "hr=" "1.5"
D24V2, continuous
D24V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 24(17Q12) CNV         15   43
  AMP PEAK 24(17Q12) WILD-TYPE   19   57
        clus
vv       AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE
  FEMALE                     15                           19
  MALE                       43                           57
D24V4, continuous
D24V5, continuous
                              vv
clus                           M0 M1 MX
  AMP PEAK 24(17Q12) CNV       29  2 27
  AMP PEAK 24(17Q12) WILD-TYPE 48  3 24
D24V6, multiclass
    clus
vv   AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE
  M0                     29                           48
  M1                      2                            3
  MX                     27                           24
                              vv
clus                           N0 N1 N2 N3 NX
  AMP PEAK 24(17Q12) CNV       26  9 15  2  5
  AMP PEAK 24(17Q12) WILD-TYPE 49  5 12  3  5
D24V7, multiclass
D24V8, continuous
D24V9, continuous
                              vv
clus                           STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 24(17Q12) CNV             1       14        14       26
  AMP PEAK 24(17Q12) WILD-TYPE       0       22        30       22
D24V10, multiclass
           clus
vv          AMP PEAK 24(17Q12) CNV AMP PEAK 24(17Q12) WILD-TYPE
  STAGE I                        1                            0
  STAGE II                      14                           22
  STAGE III                     14                           30
  STAGE IV                      26                           22

Clustering(25) Variable = Amp Peak 25(19q12)
D25V1, survival
                              sevent
clus2                           0  1
  AMP PEAK 25(19Q12) CNV       43 13
  AMP PEAK 25(19Q12) WILD-TYPE 50 21
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                          56                           71 
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                          13                           21 
$`AMP PEAK 25(19Q12) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20V 
        2.66         6.74        19.00        26.10        12.16         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0F0 TCGA-C4-A0F6 
        8.35         8.25         5.88         3.65         1.94         2.01 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 
        0.43        12.92         5.46         8.09         2.53        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I4 TCGA-DK-A2I6 
        8.98         8.91       100.47         1.81       123.85        75.32 
TCGA-DK-A3IL TCGA-DK-A3X1 TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B8 TCGA-FD-A3SJ 
        3.98        41.03        36.43         8.81        11.05        24.30 
TCGA-FD-A3SL TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
       10.98        19.79         1.94         7.89         6.84        15.16 
TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EO TCGA-G2-A3IE TCGA-G2-A3VY 
        4.08         3.22        49.91        32.78        20.12         0.82 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GU-A42R 
        4.50         1.38         1.02         1.08         7.69         3.22 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40G 
        4.37         6.41         5.69         7.63         7.79         5.33 
TCGA-H4-A2HQ TCGA-K4-A3WS 
        6.71         8.71 

$`AMP PEAK 25(19Q12) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20P TCGA-BT-A20Q 
       12.79         7.33         6.58        11.93        17.85        19.46 
TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-CF-A1HR 
        5.06        14.89         8.61         4.64         8.98         0.46 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1AA 
        0.69         4.90         7.20         5.19         2.14         7.04 
TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I2 
      118.88         7.17         5.85         6.64        10.59         7.76 
TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT 
        2.20         7.82         8.22        10.49        37.84         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X2 
       11.51         9.67         8.28        10.55       131.15        17.98 
TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N5 
        0.10         8.32         8.94         6.87         4.01         8.94 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP 
        7.96        32.02         6.12         6.81         5.49         4.54 
TCGA-FD-A3SQ TCGA-FJ-A3ZE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES 
       46.78         3.48        26.50         5.65        26.93        17.26 
TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3WC TCGA-GD-A3OP 
        7.04         2.86         2.24         1.32         2.50         2.10 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JX TCGA-GV-A3QI 
        3.12         5.82         6.38         7.56         6.15         4.11 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-K4-A3WU TCGA-K4-A3WV 
        6.64         6.38         1.51         3.42         4.64 

      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                        0.43                         0.10 
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                      123.85                       131.15 
      AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE 
                        7.66                         6.87 
[1] "0.4 - 123.8 (7.7)" "0.1 - 131.2 (6.9)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-K4-A3WV 
"AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-K4-A3WV 
"AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "AMP PEAK 25(19Q12) CNV"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"AMP PEAK 25(19Q12) WILD-TYPE" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"AMP PEAK 25(19Q12) WILD-TYPE"       "AMP PEAK 25(19Q12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
      "AMP PEAK 25(19Q12) CNV" "AMP PEAK 25(19Q12) WILD-TYPE" 
                  TCGA-K4-A3WV 
"AMP PEAK 25(19Q12) WILD-TYPE" 
[1] "hr=" "1.7"
D25V2, continuous
D25V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 25(19Q12) CNV         15   44
  AMP PEAK 25(19Q12) WILD-TYPE   19   56
        clus
vv       AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE
  FEMALE                     15                           19
  MALE                       44                           56
D25V4, continuous
D25V5, continuous
                              vv
clus                           M0 M1 MX
  AMP PEAK 25(19Q12) CNV       31  2 25
  AMP PEAK 25(19Q12) WILD-TYPE 46  3 26
D25V6, multiclass
    clus
vv   AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE
  M0                     31                           46
  M1                      2                            3
  MX                     25                           26
                              vv
clus                           N0 N1 N2 N3 NX
  AMP PEAK 25(19Q12) CNV       28  6 16  2  4
  AMP PEAK 25(19Q12) WILD-TYPE 47  8 11  3  6
D25V7, multiclass
D25V8, continuous
D25V9, continuous
                              vv
clus                           STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 25(19Q12) CNV             0       13        19       25
  AMP PEAK 25(19Q12) WILD-TYPE       1       23        25       23
D25V10, multiclass
           clus
vv          AMP PEAK 25(19Q12) CNV AMP PEAK 25(19Q12) WILD-TYPE
  STAGE I                        0                            1
  STAGE II                      13                           23
  STAGE III                     19                           25
  STAGE IV                      25                           23

Clustering(26) Variable = Amp Peak 26(19q13.43)
D26V1, survival
                                 sevent
clus2                              0  1
  AMP PEAK 26(19Q13.43) CNV       43 11
  AMP PEAK 26(19Q13.43) WILD-TYPE 50 23
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                             54                              73 
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                             11                              23 
$`AMP PEAK 26(19Q13.43) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20V TCGA-BT-A20X 
        2.66         6.74        19.00        26.10         5.06         8.25 
TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CU-A0YR 
        3.65         8.98         1.94         2.01         0.43         7.20 
TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AB 
        5.46         8.09         2.53        31.40         8.98         8.91 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM 
      118.88       100.47       123.85         2.20         3.98         7.82 
TCGA-DK-A3IV TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3SL TCGA-FD-A3SS 
        9.67        17.98        36.43         8.81        10.98         1.94 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EO 
        7.89         6.84        15.16         3.22        49.91        32.78 
TCGA-G2-A3IE TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OQ 
       20.12         1.38         1.02         1.08         7.69         3.12 
TCGA-GD-A3OS TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF 
        5.82         3.22         4.37         6.41         5.69         7.63 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WU 
        7.79         4.11         5.33         1.51         6.71         3.42 

$`AMP PEAK 26(19Q13.43) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P 
       12.79         7.33         6.58        11.93        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A2LA 
       19.46         5.06        14.89         8.61         8.35         5.88 
TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3QU 
        4.64         0.46         0.69        12.92         4.90         5.19 
TCGA-DK-A1A5 TCGA-DK-A1AA TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX 
        2.14         7.04         7.17         5.85         6.64         1.81 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS 
       10.59         7.76        75.32         8.22        10.49        37.84 
TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 
        5.52        11.51         8.28        10.55       131.15        41.03 
TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.32         8.94         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SM TCGA-FD-A3SN 
        8.94         7.96        32.02        24.30         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FJ-A3ZE TCGA-FJ-A3ZF 
        5.49         4.54        46.78        19.79         3.48         4.08 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY 
       26.50         5.65        26.93        17.26         7.04         0.82 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3WC TCGA-GD-A3OP 
        2.86         2.24         1.32         4.50         2.50         2.10 
TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JX TCGA-GV-A3QK TCGA-GV-A40E TCGA-K4-A3WS 
        6.38         7.56         6.15         6.64         6.38         8.71 
TCGA-K4-A3WV 
        4.64 

      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                           0.43                            0.10 
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                         123.85                          131.15 
      AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE 
                           6.79                            7.04 
[1] "0.4 - 123.8 (6.8)" "0.1 - 131.2 (7.0)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-K4-A3WV 
"AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-K4-A3WV 
"AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"AMP PEAK 26(19Q13.43) WILD-TYPE" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "AMP PEAK 26(19Q13.43) CNV" "AMP PEAK 26(19Q13.43) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
      "AMP PEAK 26(19Q13.43) CNV"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
"AMP PEAK 26(19Q13.43) WILD-TYPE"       "AMP PEAK 26(19Q13.43) CNV" 
                     TCGA-K4-A3WV 
"AMP PEAK 26(19Q13.43) WILD-TYPE" 
[1] "hr=" "1.6"
D26V2, continuous
D26V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 26(19Q13.43) CNV         15   42
  AMP PEAK 26(19Q13.43) WILD-TYPE   19   58
        clus
vv       AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE
  FEMALE                        15                              19
  MALE                          42                              58
D26V4, continuous
D26V5, continuous
                                 vv
clus                              M0 M1 MX
  AMP PEAK 26(19Q13.43) CNV       29  3 25
  AMP PEAK 26(19Q13.43) WILD-TYPE 48  2 26
D26V6, multiclass
    clus
vv   AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE
  M0                        29                              48
  M1                         3                               2
  MX                        25                              26
                                 vv
clus                              N0 N1 N2 N3 NX
  AMP PEAK 26(19Q13.43) CNV       24  7 16  2  6
  AMP PEAK 26(19Q13.43) WILD-TYPE 51  7 11  3  4
D26V7, multiclass
D26V8, continuous
D26V9, continuous
                                 vv
clus                              STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 26(19Q13.43) CNV             0       12        16       26
  AMP PEAK 26(19Q13.43) WILD-TYPE       1       24        28       22
D26V10, multiclass
           clus
vv          AMP PEAK 26(19Q13.43) CNV AMP PEAK 26(19Q13.43) WILD-TYPE
  STAGE I                           0                               1
  STAGE II                         12                              24
  STAGE III                        16                              28
  STAGE IV                         26                              22

Clustering(27) Variable = Amp Peak 27(20q11.21)
D27V1, survival
                                 sevent
clus2                              0  1
  AMP PEAK 27(20Q11.21) CNV       64 26
  AMP PEAK 27(20Q11.21) WILD-TYPE 29  8
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                             90                              37 
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                             26                               8 
$`AMP PEAK 27(20Q11.21) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N 
       12.79         2.66         6.74         6.58        19.00        26.10 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W 
       17.85        19.46         5.06        14.89         5.06         8.35 
TCGA-BT-A20X TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR 
        8.25         3.65         8.98         1.94         2.01         0.46 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1A5 
        0.43        12.92         4.90         7.20         5.46         2.14 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 
       31.40         8.98       118.88       100.47         1.81        10.59 
TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM 
        7.76       123.85        75.32         2.20         3.98         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WX 
        8.22        10.49        37.84        11.51         9.67        10.55 
TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 
       41.03        17.98        36.43         8.81         6.87         4.01 
TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SP TCGA-FD-A3SQ 
        8.94        32.02        24.30        10.98         4.54        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FT-A3EE 
       19.79         1.94         7.89        15.16         3.48         3.22 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A3VY TCGA-GC-A3BM 
       49.91        26.50         5.65        32.78         0.82         2.86 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS 
        2.24         1.32         4.50         1.38         1.02         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV 
        7.69         2.10         5.82         7.56         3.22         4.37 
TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI 
        6.41         6.15         5.69         7.63         7.79         4.11 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.38         5.33         6.71         8.71         3.42         4.64 

$`AMP PEAK 27(20Q11.21) WILD-TYPE`
TCGA-BL-A13I TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20U TCGA-BT-A2LA TCGA-BT-A3PH 
        7.33        11.93        12.16         8.61         5.88         4.64 
TCGA-CF-A27C TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1AA TCGA-DK-A1AB 
        0.69         5.19         8.09         2.53         7.04         8.91 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A3IT TCGA-DK-A3WW TCGA-DK-A3WY 
        7.17         5.85         6.64         5.52         8.28       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3SM 
        0.10         8.32         8.94        11.05         7.96         6.12 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A43U TCGA-FJ-A3ZF TCGA-G2-A2EL TCGA-G2-A2ES 
        6.81         5.49         6.84         4.08        26.93        17.26 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3WC TCGA-GD-A3OQ TCGA-GU-A42P TCGA-GV-A3QK 
        7.04        20.12         2.50         3.12         6.38         6.64 
TCGA-H4-A2HO 
        1.51 

      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                           0.43                            0.10 
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                         123.85                          131.15 
      AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE 
                           7.38                            6.84 
[1] "0.4 - 123.8 (7.4)" "0.1 - 131.2 (6.8)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-K4-A3WV 
      "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-K4-A3WV 
      "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"AMP PEAK 27(20Q11.21) WILD-TYPE" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "AMP PEAK 27(20Q11.21) CNV" "AMP PEAK 27(20Q11.21) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"AMP PEAK 27(20Q11.21) WILD-TYPE"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
      "AMP PEAK 27(20Q11.21) CNV"       "AMP PEAK 27(20Q11.21) CNV" 
                     TCGA-K4-A3WV 
      "AMP PEAK 27(20Q11.21) CNV" 
[1] "hr=" "1.1"
D27V2, continuous
D27V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 27(20Q11.21) CNV         24   71
  AMP PEAK 27(20Q11.21) WILD-TYPE   10   29
        clus
vv       AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE
  FEMALE                        24                              10
  MALE                          71                              29
D27V4, continuous
D27V5, continuous
                                 vv
clus                              M0 M1 MX
  AMP PEAK 27(20Q11.21) CNV       53  4 37
  AMP PEAK 27(20Q11.21) WILD-TYPE 24  1 14
D27V6, multiclass
    clus
vv   AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE
  M0                        53                              24
  M1                         4                               1
  MX                        37                              14
                                 vv
clus                              N0 N1 N2 N3 NX
  AMP PEAK 27(20Q11.21) CNV       51  9 21  5  7
  AMP PEAK 27(20Q11.21) WILD-TYPE 24  5  6  0  3
D27V7, multiclass
D27V8, continuous
D27V9, continuous
                                 vv
clus                              STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 27(20Q11.21) CNV             1       27        28       35
  AMP PEAK 27(20Q11.21) WILD-TYPE       0        9        16       13
D27V10, multiclass
           clus
vv          AMP PEAK 27(20Q11.21) CNV AMP PEAK 27(20Q11.21) WILD-TYPE
  STAGE I                           1                               0
  STAGE II                         27                               9
  STAGE III                        28                              16
  STAGE IV                         35                              13

Clustering(28) Variable = Amp Peak 28(22q11.23)
D28V1, survival
                                 sevent
clus2                              0  1
  AMP PEAK 28(22Q11.23) CNV       24  6
  AMP PEAK 28(22Q11.23) WILD-TYPE 69 28
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                             30                              97 
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                              6                              28 
$`AMP PEAK 28(22Q11.23) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A20W TCGA-C4-A0F6 TCGA-CU-A0YR TCGA-DK-A1A6 
       12.79         2.66         8.35         2.01         7.20        31.40 
TCGA-DK-A1AD TCGA-DK-A2I6 TCGA-DK-A3IN TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3WX 
      100.47        75.32         8.22        37.84        11.51        10.55 
TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3SL TCGA-FD-A3SN TCGA-G2-A2EF TCGA-G2-A2EO 
        6.87         4.01        10.98         6.81        49.91        32.78 
TCGA-G2-A2ES TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RD TCGA-GD-A2C5 
       17.26        20.12         2.24         1.32         1.02         7.69 
TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        4.37         5.69         7.79         4.11         6.64         6.38 

$`AMP PEAK 28(22Q11.23) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N 
        7.33         6.74         6.58        11.93        19.00        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U 
       12.16        17.85        19.46         5.06        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        5.06         8.25         5.88         3.65         4.64         8.98 
TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO 
        1.94         0.46         0.43         0.69        12.92         4.90 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 
        5.46         5.19         8.09         2.53         2.14         8.98 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG 
        7.04         8.91       118.88         7.17         5.85         6.64 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IL 
        1.81        10.59         7.76       123.85         2.20         3.98 
TCGA-DK-A3IM TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY 
        7.82        10.49         5.52         9.67         8.28       131.15 
TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 
       41.03        17.98        36.43         0.10         8.81         8.32 
TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ 
        8.94        11.05         8.94         7.96        32.02        24.30 
TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS 
        6.12         5.49         4.54        46.78        19.79         1.94 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE 
        7.89         6.84        15.16         3.48         4.08         3.22 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM 
       26.50         5.65        26.93         7.04         0.82         2.86 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OQ 
        4.50         1.38         2.50         1.08         2.10         3.12 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3JX 
        5.82         6.38         7.56         3.22         6.41         6.15 
TCGA-GV-A3QF TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        7.63         5.33         1.51         6.71         8.71         3.42 
TCGA-K4-A3WV 
        4.64 

      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                           1.02                            0.10 
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                         100.47                          131.15 
      AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE 
                           7.74                            6.74 
[1] "1.0 - 100.5 (7.7)" "0.1 - 131.2 (6.7)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-K4-A3WV 
"AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-K4-A3WV 
"AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
"AMP PEAK 28(22Q11.23) WILD-TYPE"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "AMP PEAK 28(22Q11.23) CNV"       "AMP PEAK 28(22Q11.23) CNV" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "AMP PEAK 28(22Q11.23) CNV" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
"AMP PEAK 28(22Q11.23) WILD-TYPE" "AMP PEAK 28(22Q11.23) WILD-TYPE" 
                     TCGA-K4-A3WV 
"AMP PEAK 28(22Q11.23) WILD-TYPE" 
[1] "hr=" "2"  
D28V2, continuous
D28V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 28(22Q11.23) CNV          5   27
  AMP PEAK 28(22Q11.23) WILD-TYPE   29   73
        clus
vv       AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE
  FEMALE                         5                              29
  MALE                          27                              73
D28V4, continuous
D28V5, continuous
                                 vv
clus                              M0 M1 MX
  AMP PEAK 28(22Q11.23) CNV       20  1 11
  AMP PEAK 28(22Q11.23) WILD-TYPE 57  4 40
D28V6, multiclass
    clus
vv   AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE
  M0                        20                              57
  M1                         1                               4
  MX                        11                              40
                                 vv
clus                              N0 N1 N2 N3 NX
  AMP PEAK 28(22Q11.23) CNV       17  3  7  1  4
  AMP PEAK 28(22Q11.23) WILD-TYPE 58 11 20  4  6
D28V7, multiclass
D28V8, continuous
D28V9, continuous
                                 vv
clus                              STAGE I STAGE II STAGE III STAGE IV
  AMP PEAK 28(22Q11.23) CNV             1       10         9       11
  AMP PEAK 28(22Q11.23) WILD-TYPE       0       26        35       37
D28V10, multiclass
           clus
vv          AMP PEAK 28(22Q11.23) CNV AMP PEAK 28(22Q11.23) WILD-TYPE
  STAGE I                           1                               0
  STAGE II                         10                              26
  STAGE III                         9                              35
  STAGE IV                         11                              37

Clustering(29) Variable = Del Peak  1(1p36.11)
D29V1, survival
                                sevent
clus2                             0  1
  DEL PEAK  1(1P36.11) CNV       14  8
  DEL PEAK  1(1P36.11) WILD-TYPE 79 26
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                            22                            105 
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                             8                             26 
$`DEL PEAK  1(1P36.11) CNV`
TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20T TCGA-BT-A2LD TCGA-CF-A1HR TCGA-CF-A1HS 
        6.58        19.00        14.89         3.65         0.46         0.43 
TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1AE TCGA-DK-A2I2 TCGA-DK-A3IQ TCGA-DK-A3IT 
        7.20         5.46         7.17         7.76        10.49         5.52 
TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3SO TCGA-FJ-A3ZE TCGA-G2-A2EL 
       10.55        36.43         8.94         5.49         3.48        26.93 
TCGA-GV-A3JV TCGA-GV-A3QI TCGA-K4-A3WS TCGA-K4-A3WV 
        4.37         4.11         8.71         4.64 

$`DEL PEAK  1(1P36.11) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20N 
       12.79         7.33         2.66         6.74        11.93        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V 
       12.16        17.85        19.46         5.06         8.61         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 
        8.35         8.25         5.88         4.64         8.98         1.94 
TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3QU TCGA-CU-A3YL 
        2.01         0.69        12.92         4.90         5.19         8.09 
TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB 
        2.53         2.14        31.40         8.98         7.04         8.91 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 
      118.88       100.47         5.85         6.64         1.81        10.59 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
      123.85        75.32         2.20         3.98         7.82         8.22 
TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-DK-A3X1 
       37.84        11.51         9.67         8.28       131.15        41.03 
TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 
       17.98         0.10         8.81         8.32         6.87         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL 
       11.05         8.94         7.96        32.02        24.30        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS 
        6.12         6.81         4.54        46.78        19.79         1.94 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF 
        7.89         6.84        15.16         4.08         3.22        49.91 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE 
       26.50         5.65        32.78        17.26         7.04        20.12 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC 
        0.82         2.86         2.24         1.32         4.50         1.38 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
        1.02         2.50         1.08         7.69         2.10         3.12 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3JX 
        5.82         6.38         7.56         3.22         6.41         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G 
        5.69         7.63         7.79         6.64         6.38         5.33 
TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WU 
        1.51         6.71         3.42 

      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                         36.43                         131.15 
      DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE 
                         6.875                          7.040 
[1] "0.4 - 36.4 (6.9)"  "0.1 - 131.2 (7.0)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  1(1P36.11) CNV"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  1(1P36.11) CNV"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  1(1P36.11) CNV"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK  1(1P36.11) WILD-TYPE"       "DEL PEAK  1(1P36.11) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK  1(1P36.11) WILD-TYPE" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK  1(1P36.11) CNV" "DEL PEAK  1(1P36.11) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK  1(1P36.11) CNV" 
[1] "hr=" "1.8"
D29V2, continuous
D29V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  1(1P36.11) CNV          6   18
  DEL PEAK  1(1P36.11) WILD-TYPE   28   82
        clus
vv       DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE
  FEMALE                        6                             28
  MALE                         18                             82
D29V4, continuous
D29V5, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK  1(1P36.11) CNV       13  1 10
  DEL PEAK  1(1P36.11) WILD-TYPE 64  4 41
D29V6, multiclass
    clus
vv   DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE
  M0                       13                             64
  M1                        1                              4
  MX                       10                             41
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK  1(1P36.11) CNV       14  6  1  3  0
  DEL PEAK  1(1P36.11) WILD-TYPE 61  8 26  2 10
D29V7, multiclass
D29V8, continuous
D29V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK  1(1P36.11) CNV             0        4         8       10
  DEL PEAK  1(1P36.11) WILD-TYPE       1       32        36       38
D29V10, multiclass
           clus
vv          DEL PEAK  1(1P36.11) CNV DEL PEAK  1(1P36.11) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                         4                             32
  STAGE III                        8                             36
  STAGE IV                        10                             38

Clustering(30) Variable = Del Peak  2(1q32.1)
D30V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  2(1Q32.1) CNV       20  6
  DEL PEAK  2(1Q32.1) WILD-TYPE 73 28
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                           26                           101 
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                            6                            28 
$`DEL PEAK  2(1Q32.1) CNV`
TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A20W TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YO 
       26.10        14.89         8.35         0.46         0.43         4.90 
TCGA-CU-A3YL TCGA-DK-A2HX TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IQ 
        8.09         1.81        75.32         2.20         7.82        10.49 
TCGA-DK-A3IS TCGA-DK-A3X1 TCGA-FD-A3SL TCGA-FD-A3SR TCGA-FJ-A3Z7 TCGA-G2-A2EK 
       37.84        41.03        10.98        19.79        15.16         5.65 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RC TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QH 
       20.12         0.82         1.38         6.41         5.69         7.79 
TCGA-GV-A40E TCGA-K4-A3WU 
        6.38         3.42 

$`DEL PEAK  2(1Q32.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U 
       19.00        12.16        17.85        19.46         5.06         8.61 
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        5.06         8.25         5.88         3.65         4.64         8.98 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ 
        1.94         2.01         0.69        12.92         7.20         5.46 
TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA 
        5.19         2.53         2.14        31.40         8.98         7.04 
TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG 
        8.91       118.88       100.47         7.17         5.85         6.64 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IT 
       10.59         7.76       123.85         3.98         8.22         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X2 
       11.51         9.67         8.28        10.55       131.15        17.98 
TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 
       36.43         0.10         8.81         8.32         8.94         6.87 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ 
        4.01        11.05         8.94         7.96        32.02        24.30 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SS 
        6.12         6.81         5.49         4.54        46.78         1.94 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF 
        7.89         6.84         3.48         4.08         3.22        49.91 
TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3BM 
       26.50        26.93        32.78        17.26         7.04         2.86 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS 
        2.24         1.32         4.50         1.02         2.50         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q 
        7.69         2.10         3.12         5.82         6.38         7.56 
TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A3QK 
        3.22         4.37         6.15         7.63         4.11         6.64 
TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WV 
        5.33         1.51         6.71         8.71         4.64 

      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                        75.32                        131.15 
      DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE 
                        7.805                         6.870 
[1] "0.4 - 75.3 (7.8)"  "0.1 - 131.2 (6.9)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  2(1Q32.1) CNV"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-K4-A3WV 
"DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  2(1Q32.1) CNV"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-K4-A3WV 
"DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  2(1Q32.1) CNV"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK  2(1Q32.1) CNV" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  2(1Q32.1) WILD-TYPE" "DEL PEAK  2(1Q32.1) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK  2(1Q32.1) WILD-TYPE"       "DEL PEAK  2(1Q32.1) CNV" 
                   TCGA-K4-A3WV 
"DEL PEAK  2(1Q32.1) WILD-TYPE" 
[1] "hr=" "1.5"
D30V2, continuous
D30V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  2(1Q32.1) CNV          3   23
  DEL PEAK  2(1Q32.1) WILD-TYPE   31   77
        clus
vv       DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE
  FEMALE                       3                            31
  MALE                        23                            77
D30V4, continuous
D30V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  2(1Q32.1) CNV       14  1 10
  DEL PEAK  2(1Q32.1) WILD-TYPE 63  4 41
D30V6, multiclass
    clus
vv   DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE
  M0                      14                            63
  M1                       1                             4
  MX                      10                            41
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  2(1Q32.1) CNV       12  2  6  1  4
  DEL PEAK  2(1Q32.1) WILD-TYPE 63 12 21  4  6
D30V7, multiclass
D30V8, continuous
D30V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK  2(1Q32.1) CNV             0        9         5        9
  DEL PEAK  2(1Q32.1) WILD-TYPE       1       27        39       39
D30V10, multiclass
           clus
vv          DEL PEAK  2(1Q32.1) CNV DEL PEAK  2(1Q32.1) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                        9                            27
  STAGE III                       5                            39
  STAGE IV                        9                            39

Clustering(31) Variable = Del Peak  3(2q22.1)
D31V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  3(2Q22.1) CNV       25 14
  DEL PEAK  3(2Q22.1) WILD-TYPE 68 20
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                           39                            88 
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                           14                            20 
$`DEL PEAK  3(2Q22.1) CNV`
TCGA-BL-A13I TCGA-BT-A20P TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LA 
        7.33        17.85        14.89         5.06         8.35         5.88 
TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F6 TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3QU 
        4.64         8.98         2.01        12.92         5.46         5.19 
TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A3IK TCGA-DK-A3IS 
        2.53         8.98         1.81        10.59         2.20        37.84 
TCGA-DK-A3IV TCGA-DK-A3X2 TCGA-FD-A3B5 TCGA-FD-A3N6 TCGA-FD-A3SJ TCGA-FD-A3SR 
        9.67        17.98         8.94         7.96        24.30        19.79 
TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A3VY TCGA-GC-A3BM 
        4.08        49.91        26.50        26.93         0.82         2.86 
TCGA-GC-A3RD TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3JW 
        1.02         2.10         5.82         7.56         4.37         6.41 
TCGA-GV-A3JZ TCGA-GV-A3QK TCGA-K4-A3WU 
        5.69         6.64         3.42 

$`DEL PEAK  3(2Q22.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         2.66         6.74         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20X 
       26.10        12.16        19.46         5.06         8.61         8.25 
TCGA-BT-A2LD TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YO 
        3.65         1.94         0.46         0.43         0.69         4.90 
TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB 
        7.20         8.09         2.14        31.40         7.04         8.91 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I2 
      118.88       100.47         7.17         5.85         6.64         7.76 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ 
      123.85        75.32         3.98         7.82         8.22        10.49 
TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 
        5.52        11.51         8.28        10.55       131.15        41.03 
TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 
       36.43         0.10         8.81         8.32         6.87         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
       11.05         8.94        32.02        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U 
        5.49         4.54        46.78         1.94         7.89         6.84 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FT-A3EE TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES 
       15.16         3.48         3.22         5.65        32.78        17.26 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC 
        7.04        20.12         2.24         1.32         4.50         1.38 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GU-A42P TCGA-GU-A42R 
        2.50         1.08         7.69         3.12         6.38         3.22 
TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G 
        6.15         7.63         7.79         4.11         6.38         5.33 
TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WV 
        1.51         6.71         8.71         4.64 

      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                         0.82                          0.10 
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                        49.91                        131.15 
      DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE 
                         6.64                          7.04 
[1] "0.8 - 49.9 (6.6)"  "0.1 - 131.2 (7.0)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-K4-A3WV 
"DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-K4-A3WV 
"DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK  3(2Q22.1) CNV" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK  3(2Q22.1) CNV"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK  3(2Q22.1) WILD-TYPE"       "DEL PEAK  3(2Q22.1) CNV" 
                   TCGA-K4-A3WV 
"DEL PEAK  3(2Q22.1) WILD-TYPE" 
[1] "hr=" "1.6"
D31V2, continuous
D31V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(2Q22.1) CNV         14   27
  DEL PEAK  3(2Q22.1) WILD-TYPE   20   73
        clus
vv       DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  FEMALE                      14                            20
  MALE                        27                            73
D31V4, continuous
D31V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  3(2Q22.1) CNV       28  1 11
  DEL PEAK  3(2Q22.1) WILD-TYPE 49  4 40
D31V6, multiclass
    clus
vv   DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  M0                      28                            49
  M1                       1                             4
  MX                      11                            40
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  3(2Q22.1) CNV       20  5 11  1  3
  DEL PEAK  3(2Q22.1) WILD-TYPE 55  9 16  4  7
D31V7, multiclass
D31V8, continuous
D31V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK  3(2Q22.1) CNV             0       13        10       17
  DEL PEAK  3(2Q22.1) WILD-TYPE       1       23        34       31
D31V10, multiclass
           clus
vv          DEL PEAK  3(2Q22.1) CNV DEL PEAK  3(2Q22.1) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       13                            23
  STAGE III                      10                            34
  STAGE IV                       17                            31

Clustering(32) Variable = Del Peak  4(2q34)
D32V1, survival
                             sevent
clus2                          0  1
  DEL PEAK  4(2Q34) CNV       37 16
  DEL PEAK  4(2Q34) WILD-TYPE 56 18
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                         53                          74 
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                         16                          18 
$`DEL PEAK  4(2Q34) CNV`
TCGA-BL-A13J TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X 
        2.66        26.10        14.89         5.06         8.35         8.25 
TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3KJ 
        5.88         4.64         8.98         0.43        12.92         5.46 
TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX 
        5.19         8.09         2.14       118.88       100.47         1.81 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IS 
       10.59         7.76         2.20         3.98         7.82        37.84 
TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-FD-A3B4 TCGA-FD-A3B5 
        5.52         9.67        41.03        17.98         8.32         8.94 
TCGA-FD-A3N5 TCGA-FD-A3SN TCGA-FD-A3SR TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EK 
        8.94         6.81        19.79         4.08        49.91         5.65 
TCGA-G2-A2EL TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS 
       26.93         0.82         2.86         1.02         2.50         1.08 
TCGA-GD-A3OP TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QH TCGA-GV-A3QI 
        2.10         6.38         4.37         6.41         7.79         4.11 
TCGA-GV-A3QK TCGA-GV-A40G TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.64         5.33         8.71         3.42         4.64 

$`DEL PEAK  4(2Q34) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         6.74         6.58        11.93        19.00 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A2LD 
       12.16        17.85        19.46         5.06         8.61         3.65 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR 
        1.94         2.01         0.46         0.69         4.90         7.20 
TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE 
        2.53        31.40         8.98         7.04         8.91         7.17 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IN TCGA-DK-A3IQ 
        5.85         6.64       123.85        75.32         8.22        10.49 
TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 
       11.51         8.28        10.55       131.15        36.43         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA 
        8.81         6.87         4.01        11.05         7.96        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
       24.30        10.98         6.12         5.49         4.54        46.78 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FT-A3EE 
        1.94         7.89         6.84        15.16         3.48         3.22 
TCGA-G2-A2EJ TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3I6 
       26.50        32.78        17.26         7.04        20.12         2.24 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS 
        1.32         4.50         1.38         7.69         3.12         5.82 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A40E 
        7.56         3.22         6.15         5.69         7.63         6.38 
TCGA-H4-A2HO TCGA-H4-A2HQ 
        1.51         6.71 

      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                       0.43                        0.10 
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                     118.88                      131.15 
      DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE 
                      6.410                       7.185 
[1] "0.4 - 118.9 (6.4)" "0.1 - 131.2 (7.2)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-K4-A3WV 
      "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-K4-A3WV 
      "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
      "DEL PEAK  4(2Q34) CNV" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"DEL PEAK  4(2Q34) WILD-TYPE"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK  4(2Q34) WILD-TYPE" "DEL PEAK  4(2Q34) WILD-TYPE" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
      "DEL PEAK  4(2Q34) CNV"       "DEL PEAK  4(2Q34) CNV" 
                 TCGA-K4-A3WV 
      "DEL PEAK  4(2Q34) CNV" 
[1] "hr=" "1.4"
D32V2, continuous
D32V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  4(2Q34) CNV         14   43
  DEL PEAK  4(2Q34) WILD-TYPE   20   57
        clus
vv       DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE
  FEMALE                    14                          20
  MALE                      43                          57
D32V4, continuous
D32V5, continuous
                             vv
clus                          M0 M1 MX
  DEL PEAK  4(2Q34) CNV       36  1 19
  DEL PEAK  4(2Q34) WILD-TYPE 41  4 32
D32V6, multiclass
    clus
vv   DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE
  M0                    36                          41
  M1                     1                           4
  MX                    19                          32
                             vv
clus                          N0 N1 N2 N3 NX
  DEL PEAK  4(2Q34) CNV       31  7 13  1  4
  DEL PEAK  4(2Q34) WILD-TYPE 44  7 14  4  6
D32V7, multiclass
D32V8, continuous
D32V9, continuous
                             vv
clus                          STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK  4(2Q34) CNV             0       17        16       21
  DEL PEAK  4(2Q34) WILD-TYPE       1       19        28       27
D32V10, multiclass
           clus
vv          DEL PEAK  4(2Q34) CNV DEL PEAK  4(2Q34) WILD-TYPE
  STAGE I                       0                           1
  STAGE II                     17                          19
  STAGE III                    16                          28
  STAGE IV                     21                          27

Clustering(33) Variable = Del Peak  5(2q37.1)
D33V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  5(2Q37.1) CNV       45 18
  DEL PEAK  5(2Q37.1) WILD-TYPE 48 16
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                           63                            64 
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                           18                            16 
$`DEL PEAK  5(2Q37.1) CNV`
TCGA-BL-A13J TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20V 
        2.66        19.00        26.10        19.46        14.89         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-CF-A1HR 
        8.35         8.25         5.88         4.64         8.98         0.46 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL 
        0.43        12.92         7.20         5.46         5.19         8.09 
TCGA-DK-A1A5 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 
        2.14       118.88       100.47         6.64         1.81        10.59 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
        2.20         3.98         7.82        37.84         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3X2 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3N5 TCGA-FD-A3SJ 
        9.67        17.98         8.32         8.94         8.94        24.30 
TCGA-FD-A3SN TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EK 
        6.81        19.79         1.94         4.08        49.91         5.65 
TCGA-G2-A2EL TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD 
       26.93         0.82         2.86         4.50         1.38         1.02 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JW 
        2.50         1.08         2.10         6.38         4.37         6.41 
TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40G 
        6.15         7.63         7.79         4.11         6.64         5.33 
TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        8.71         3.42         4.64 

$`DEL PEAK  5(2Q37.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O 
       12.79         7.33         6.74         6.58        11.93        12.16 
TCGA-BT-A20P TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A2LD TCGA-C4-A0F0 TCGA-C4-A0F6 
       17.85         5.06         8.61         3.65         1.94         2.01 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA 
        0.69         4.90         2.53        31.40         8.98         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 
        8.91         7.17         5.85         7.76       123.85        75.32 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 
        8.22        10.49         8.28        10.55       131.15        41.03 
TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
       36.43         0.10         8.81         6.87         4.01        11.05 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP 
        7.96        32.02        10.98         6.12         5.49         4.54 
TCGA-FD-A3SQ TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FT-A3EE 
       46.78         7.89         6.84        15.16         3.48         3.22 
TCGA-G2-A2EJ TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-GC-A3I6 
       26.50        32.78        17.26         7.04        20.12         2.24 
TCGA-GC-A3OO TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R 
        1.32         7.69         3.12         5.82         7.56         3.22 
TCGA-GV-A3JZ TCGA-GV-A40E TCGA-H4-A2HO TCGA-H4-A2HQ 
        5.69         6.38         1.51         6.71 

      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                       118.88                        131.15 
      DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE 
                        6.410                         7.445 
[1] "0.4 - 118.9 (6.4)" "0.1 - 131.2 (7.4)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK  5(2Q37.1) CNV" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  5(2Q37.1) WILD-TYPE"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  5(2Q37.1) WILD-TYPE" "DEL PEAK  5(2Q37.1) WILD-TYPE" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  5(2Q37.1) CNV"       "DEL PEAK  5(2Q37.1) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK  5(2Q37.1) CNV" 
[1] "hr=" "1.4"
D33V2, continuous
D33V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  5(2Q37.1) CNV         12   56
  DEL PEAK  5(2Q37.1) WILD-TYPE   22   44
        clus
vv       DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE
  FEMALE                      12                            22
  MALE                        56                            44
D33V4, continuous
D33V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  5(2Q37.1) CNV       42  1 24
  DEL PEAK  5(2Q37.1) WILD-TYPE 35  4 27
D33V6, multiclass
    clus
vv   DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE
  M0                      42                            35
  M1                       1                             4
  MX                      24                            27
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  5(2Q37.1) CNV       38  7 17  1  4
  DEL PEAK  5(2Q37.1) WILD-TYPE 37  7 10  4  6
D33V7, multiclass
D33V8, continuous
D33V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK  5(2Q37.1) CNV             0       21        18       25
  DEL PEAK  5(2Q37.1) WILD-TYPE       1       15        26       23
D33V10, multiclass
           clus
vv          DEL PEAK  5(2Q37.1) CNV DEL PEAK  5(2Q37.1) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       21                            15
  STAGE III                      18                            26
  STAGE IV                       25                            23

Clustering(34) Variable = Del Peak  6(3p21.31)
D34V1, survival
                                sevent
clus2                             0  1
  DEL PEAK  6(3P21.31) CNV       31 12
  DEL PEAK  6(3P21.31) WILD-TYPE 62 22
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                            43                             84 
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                            12                             22 
$`DEL PEAK  6(3P21.31) CNV`
TCGA-BL-A3JM TCGA-BT-A20J TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20X TCGA-C4-A0EZ 
        6.74        19.00        14.89         5.06         8.25         8.98 
TCGA-C4-A0F0 TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ 
        1.94         0.43        12.92         4.90         7.20         5.46 
TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1AB TCGA-DK-A2I2 TCGA-DK-A3IM TCGA-DK-A3IQ 
        8.09        31.40         8.91         7.76         7.82        10.49 
TCGA-DK-A3WX TCGA-DK-A3X1 TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3N5 
       10.55        41.03        36.43         8.32         6.87         8.94 
TCGA-FD-A3SJ TCGA-FJ-A3ZE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A2ES 
       24.30         3.48        49.91        26.50        26.93        17.26 
TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3WC 
        7.04         0.82         2.86         2.24         4.50         2.50 
TCGA-GC-A3YS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JW TCGA-H4-A2HQ TCGA-K4-A3WS 
        1.08         7.56         3.22         6.41         6.71         8.71 
TCGA-K4-A3WV 
        4.64 

$`DEL PEAK  6(3P21.31) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20N 
       12.79         7.33         2.66         6.58        11.93        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20W 
       12.16        17.85        19.46         5.06         8.61         8.35 
TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C 
        5.88         3.65         4.64         2.01         0.46         0.69 
TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AC 
        5.19         2.53         2.14         8.98         7.04       118.88 
TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 
      100.47         7.17         5.85         6.64         1.81        10.59 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IS 
      123.85        75.32         2.20         3.98         8.22        37.84 
TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-DK-A3X2 
        5.52        11.51         9.67         8.28       131.15        17.98 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 
        0.10         8.81         8.94         4.01        11.05         7.96 
TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP 
       32.02        10.98         6.12         6.81         5.49         4.54 
TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 
       46.78        19.79         1.94         7.89         6.84        15.16 
TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A3IE TCGA-GC-A3OO 
        4.08         3.22         5.65        32.78        20.12         1.32 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        1.38         1.02         7.69         2.10         3.12         5.82 
TCGA-GU-A42P TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        6.38         4.37         6.15         5.69         7.63         7.79 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU 
        4.11         6.64         6.38         5.33         1.51         3.42 

      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                         49.91                         131.15 
      DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE 
                          7.76                           6.64 
[1] "0.4 - 49.9 (7.8)"  "0.1 - 131.2 (6.6)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK  6(3P21.31) CNV"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK  6(3P21.31) WILD-TYPE" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK  6(3P21.31) WILD-TYPE"       "DEL PEAK  6(3P21.31) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK  6(3P21.31) CNV" "DEL PEAK  6(3P21.31) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK  6(3P21.31) CNV" 
[1] "hr=" "1"  
D34V2, continuous
D34V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  6(3P21.31) CNV         13   31
  DEL PEAK  6(3P21.31) WILD-TYPE   21   69
        clus
vv       DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE
  FEMALE                       13                             21
  MALE                         31                             69
D34V4, continuous
D34V5, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK  6(3P21.31) CNV       25  3 15
  DEL PEAK  6(3P21.31) WILD-TYPE 52  2 36
D34V6, multiclass
    clus
vv   DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE
  M0                       25                             52
  M1                        3                              2
  MX                       15                             36
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK  6(3P21.31) CNV       25  5  6  2  3
  DEL PEAK  6(3P21.31) WILD-TYPE 50  9 21  3  7
D34V7, multiclass
D34V8, continuous
D34V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK  6(3P21.31) CNV             0       14        14       14
  DEL PEAK  6(3P21.31) WILD-TYPE       1       22        30       34
D34V10, multiclass
           clus
vv          DEL PEAK  6(3P21.31) CNV DEL PEAK  6(3P21.31) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                        14                             22
  STAGE III                       14                             30
  STAGE IV                        14                             34

Clustering(35) Variable = Del Peak  7(3p14.2)
D35V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  7(3P14.2) CNV       33 10
  DEL PEAK  7(3P14.2) WILD-TYPE 60 24
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                           43                            84 
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                           10                            24 
$`DEL PEAK  7(3P14.2) CNV`
TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-C4-A0EZ TCGA-C4-A0F0 
       14.89         5.06         8.35         8.25         8.98         1.94 
TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A6 
        0.43        12.92         7.20         5.46         8.09        31.40 
TCGA-DK-A1AB TCGA-DK-A2I2 TCGA-DK-A3IM TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3WX 
        8.91         7.76         7.82        10.49        37.84        10.55 
TCGA-DK-A3X1 TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3SJ 
       41.03        36.43         8.32         6.87         8.94        24.30 
TCGA-FD-A3SN TCGA-FD-A43N TCGA-FJ-A3ZE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2ES 
        6.81         7.89         3.48        49.91        26.50        17.26 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB 
        7.04        20.12         0.82         2.86         2.24         4.50 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GU-A42Q TCGA-GV-A3JW TCGA-H4-A2HQ TCGA-K4-A3WS 
        2.50         1.08         7.56         6.41         6.71         8.71 
TCGA-K4-A3WV 
        4.64 

$`DEL PEAK  7(3P14.2) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
       19.00        26.10        12.16        17.85        19.46         5.06 
TCGA-BT-A20U TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR 
        8.61         5.88         3.65         4.64         2.01         0.46 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 
        0.69         4.90         5.19         2.53         2.14         8.98 
TCGA-DK-A1AA TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG 
        7.04       118.88       100.47         7.17         5.85         6.64 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL 
        1.81        10.59       123.85        75.32         2.20         3.98 
TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY 
        8.22         5.52        11.51         9.67         8.28       131.15 
TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 
       17.98         0.10         8.81         8.94         4.01        11.05 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP 
        7.96        32.02        10.98         6.12         5.49         4.54 
TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       46.78        19.79         1.94         6.84        15.16         4.08 
TCGA-FT-A3EE TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-GC-A3OO TCGA-GC-A3RC 
        3.22         5.65        26.93        32.78         1.32         1.38 
TCGA-GC-A3RD TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P 
        1.02         7.69         2.10         3.12         5.82         6.38 
TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        3.22         4.37         6.15         5.69         7.63         7.79 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU 
        4.11         6.64         6.38         5.33         1.51         3.42 

      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                        49.91                        131.15 
      DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE 
                         7.89                          6.48 
[1] "0.4 - 49.9 (7.9)"  "0.1 - 131.2 (6.5)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  7(3P14.2) CNV"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  7(3P14.2) WILD-TYPE" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  7(3P14.2) WILD-TYPE"       "DEL PEAK  7(3P14.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  7(3P14.2) CNV" "DEL PEAK  7(3P14.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK  7(3P14.2) CNV" 
[1] "hr=" "1.4"
D35V2, continuous
D35V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  7(3P14.2) CNV         13   32
  DEL PEAK  7(3P14.2) WILD-TYPE   21   68
        clus
vv       DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE
  FEMALE                      13                            21
  MALE                        32                            68
D35V4, continuous
D35V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  7(3P14.2) CNV       25  3 16
  DEL PEAK  7(3P14.2) WILD-TYPE 52  2 35
D35V6, multiclass
    clus
vv   DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE
  M0                      25                            52
  M1                       3                             2
  MX                      16                            35
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  7(3P14.2) CNV       26  5  5  3  4
  DEL PEAK  7(3P14.2) WILD-TYPE 49  9 22  2  6
D35V7, multiclass
D35V8, continuous
D35V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK  7(3P14.2) CNV             0       14        14       15
  DEL PEAK  7(3P14.2) WILD-TYPE       1       22        30       33
D35V10, multiclass
           clus
vv          DEL PEAK  7(3P14.2) CNV DEL PEAK  7(3P14.2) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       14                            22
  STAGE III                      14                            30
  STAGE IV                       15                            33

Clustering(36) Variable = Del Peak  8(3p12.3)
D36V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  8(3P12.3) CNV       27  9
  DEL PEAK  8(3P12.3) WILD-TYPE 66 25
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                           36                            91 
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                            9                            25 
$`DEL PEAK  8(3P12.3) CNV`
TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20X TCGA-C4-A0EZ TCGA-C4-A0F0 
       26.10        14.89         5.06         8.25         8.98         1.94 
TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1AB 
       12.92         7.20         5.46         8.09        31.40         8.91 
TCGA-DK-A2I2 TCGA-DK-A3IM TCGA-DK-A3WX TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B6 
        7.76         7.82        10.55        36.43         8.32         6.87 
TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FJ-A3ZE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
        8.94        24.30         3.48        49.91        26.50         5.65 
TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RB TCGA-GC-A3WC 
        7.04         0.82         2.86         2.24         4.50         2.50 
TCGA-GC-A3YS TCGA-GV-A3JW TCGA-GV-A3QH TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WV 
        1.08         6.41         7.79         6.71         8.71         4.64 

$`DEL PEAK  8(3P12.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U 
       19.00        12.16        17.85        19.46         5.06         8.61 
TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR 
        8.35         5.88         3.65         4.64         2.01         0.46 
TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 
        0.43         0.69         4.90         5.19         2.53         2.14 
TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
        8.98         7.04       118.88       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK 
        6.64         1.81        10.59       123.85        75.32         2.20 
TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
        3.98         8.22        10.49        37.84         5.52        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E7-A3Y1 
        9.67         8.28       131.15        41.03        17.98         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA 
        8.81         8.94         4.01        11.05         7.96        32.02 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
       10.98         6.12         6.81         5.49         4.54        46.78 
TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       19.79         1.94         7.89         6.84        15.16         4.08 
TCGA-FT-A3EE TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-GC-A3OO 
        3.22        26.93        32.78        17.26        20.12         1.32 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        1.38         1.02         7.69         2.10         3.12         5.82 
TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ 
        6.38         7.56         3.22         4.37         6.15         5.69 
TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO 
        7.63         4.11         6.64         6.38         5.33         1.51 
TCGA-K4-A3WU 
        3.42 

      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                         0.82                          0.10 
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                        49.91                        131.15 
      DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE 
                        7.775                         6.740 
[1] "0.8 - 49.9 (7.8)"  "0.1 - 131.2 (6.7)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK  8(3P12.3) CNV"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  8(3P12.3) WILD-TYPE" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  8(3P12.3) WILD-TYPE"       "DEL PEAK  8(3P12.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  8(3P12.3) CNV" "DEL PEAK  8(3P12.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK  8(3P12.3) CNV" 
[1] "hr=" "1.1"
D36V2, continuous
D36V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  8(3P12.3) CNV         11   27
  DEL PEAK  8(3P12.3) WILD-TYPE   23   73
        clus
vv       DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE
  FEMALE                      11                            23
  MALE                        27                            73
D36V4, continuous
D36V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  8(3P12.3) CNV       19  3 15
  DEL PEAK  8(3P12.3) WILD-TYPE 58  2 36
D36V6, multiclass
    clus
vv   DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE
  M0                      19                            58
  M1                       3                             2
  MX                      15                            36
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  8(3P12.3) CNV       19  5  5  3  4
  DEL PEAK  8(3P12.3) WILD-TYPE 56  9 22  2  6
D36V7, multiclass
D36V8, continuous
D36V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK  8(3P12.3) CNV             0       12        11       14
  DEL PEAK  8(3P12.3) WILD-TYPE       1       24        33       34
D36V10, multiclass
           clus
vv          DEL PEAK  8(3P12.3) CNV DEL PEAK  8(3P12.3) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       12                            24
  STAGE III                      11                            33
  STAGE IV                       14                            34

Clustering(37) Variable = Del Peak  9(4q22.1)
D37V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  9(4Q22.1) CNV       36 14
  DEL PEAK  9(4Q22.1) WILD-TYPE 57 20
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                           50                            77 
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                           14                            20 
$`DEL PEAK  9(4Q22.1) CNV`
TCGA-BL-A13I TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A2LD TCGA-BT-A3PH 
        7.33         5.06         8.61         5.06         3.65         4.64 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO 
        1.94         2.01         0.46         0.43        12.92         4.90 
TCGA-CU-A0YR TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 
        7.20         2.53         8.98       100.47         1.81        10.59 
TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ 
        7.76        75.32         2.20         7.82         8.22        10.49 
TCGA-DK-A3IT TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 
        5.52        17.98        36.43         8.81         6.87         4.01 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SO TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF 
       24.30        10.98         5.49        15.16         4.08        49.91 
TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3OO 
       26.93        32.78        17.26         7.04         2.86         1.32 
TCGA-GC-A3RB TCGA-GD-A2C5 TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3QH TCGA-H4-A2HQ 
        4.50         7.69         7.56         4.37         7.79         6.71 
TCGA-K4-A3WS TCGA-K4-A3WV 
        8.71         4.64 

$`DEL PEAK  9(4Q22.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         2.66         6.74         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20W 
       26.10        12.16        17.85        19.46        14.89         8.35 
TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0EZ TCGA-CF-A27C TCGA-CU-A3KJ TCGA-CU-A3QU 
        8.25         5.88         8.98         0.69         5.46         5.19 
TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC 
        8.09         2.14        31.40         7.04         8.91       118.88 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IS 
        7.17         5.85         6.64       123.85         3.98        37.84 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 
       11.51         9.67         8.28        10.55       131.15        41.03 
TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 
        0.10         8.32         8.94        11.05         8.94         7.96 
TCGA-FD-A3NA TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR 
       32.02         6.12         6.81         4.54        46.78        19.79 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-FT-A3EE TCGA-G2-A2EJ 
        1.94         7.89         6.84         3.48         3.22        26.50 
TCGA-G2-A2EK TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3RC TCGA-GC-A3RD 
        5.65        20.12         0.82         2.24         1.38         1.02 
TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P 
        2.50         1.08         2.10         3.12         5.82         6.38 
TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QI 
        3.22         6.41         6.15         5.69         7.63         4.11 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU 
        6.64         6.38         5.33         1.51         3.42 

      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                       100.47                        131.15 
      DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE 
                        7.265                         6.810 
[1] "0.4 - 100.5 (7.3)" "0.1 - 131.2 (6.8)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "DEL PEAK  9(4Q22.1) CNV"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK  9(4Q22.1) WILD-TYPE" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK  9(4Q22.1) WILD-TYPE"       "DEL PEAK  9(4Q22.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK  9(4Q22.1) CNV" "DEL PEAK  9(4Q22.1) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK  9(4Q22.1) CNV" 
[1] "hr=" "1.1"
D37V2, continuous
D37V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  9(4Q22.1) CNV         16   37
  DEL PEAK  9(4Q22.1) WILD-TYPE   18   63
        clus
vv       DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE
  FEMALE                      16                            18
  MALE                        37                            63
D37V4, continuous
D37V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK  9(4Q22.1) CNV       36  2 15
  DEL PEAK  9(4Q22.1) WILD-TYPE 41  3 36
D37V6, multiclass
    clus
vv   DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE
  M0                      36                            41
  M1                       2                             3
  MX                      15                            36
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK  9(4Q22.1) CNV       28  6 14  1  4
  DEL PEAK  9(4Q22.1) WILD-TYPE 47  8 13  4  6
D37V7, multiclass
D37V8, continuous
D37V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK  9(4Q22.1) CNV             0       14        15       22
  DEL PEAK  9(4Q22.1) WILD-TYPE       1       22        29       26
D37V10, multiclass
           clus
vv          DEL PEAK  9(4Q22.1) CNV DEL PEAK  9(4Q22.1) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       14                            22
  STAGE III                      15                            29
  STAGE IV                       22                            26

Clustering(38) Variable = Del Peak 10(4q34.2)
D38V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 10(4Q34.2) CNV       41 15
  DEL PEAK 10(4Q34.2) WILD-TYPE 52 19
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                           56                            71 
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                           15                            19 
$`DEL PEAK 10(4Q34.2) CNV`
TCGA-BL-A13J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W 
        2.66        26.10         5.06        14.89         5.06         8.35 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN 
        3.65         4.64         1.94         0.46         0.43        12.92 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AD TCGA-DK-A1AE 
        4.90         7.20         2.53         8.98       100.47         7.17 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM 
        1.81        10.59         7.76        75.32         2.20         7.82 
TCGA-DK-A3IN TCGA-DK-A3IT TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3B7 
        8.22         5.52        36.43         8.81         6.87         4.01 
TCGA-FD-A3SL TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       10.98         6.81         5.49         7.89        15.16         4.08 
TCGA-G2-A2EF TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM 
       49.91        26.93         7.04        20.12         0.82         2.86 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GU-A42Q 
        1.32         4.50         1.38         2.50         7.69         7.56 
TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QH TCGA-GV-A40G TCGA-H4-A2HQ 
        3.22         4.37         6.41         7.79         5.33         6.71 
TCGA-K4-A3WS TCGA-K4-A3WV 
        8.71         4.64 

$`DEL PEAK 10(4Q34.2) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         6.74         6.58        11.93        19.00 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A2LA 
       12.16        17.85        19.46         8.61         8.25         5.88 
TCGA-C4-A0EZ TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL 
        8.98         2.01         0.69         5.46         5.19         8.09 
TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AF 
        2.14        31.40         7.04         8.91       118.88         5.85 
TCGA-DK-A1AG TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU 
        6.64       123.85         3.98        10.49        37.84        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 
        9.67         8.28        10.55       131.15        41.03        17.98 
TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 
        0.10         8.32         8.94        11.05         8.94         7.96 
TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SM TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR 
       32.02        24.30         6.12         4.54        46.78        19.79 
TCGA-FD-A3SS TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK 
        1.94         6.84         3.48         3.22        26.50         5.65 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-GC-A3I6 TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A3OP 
       32.78        17.26         2.24         1.02         1.08         2.10 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF 
        3.12         5.82         6.38         6.15         5.69         7.63 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-K4-A3WU 
        4.11         6.64         6.38         1.51         3.42 

      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                       100.47                        131.15 
      DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE 
                         6.76                          7.63 
[1] "0.4 - 100.5 (6.8)" "0.1 - 131.2 (7.6)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
      "DEL PEAK 10(4Q34.2) CNV"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 10(4Q34.2) WILD-TYPE" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 10(4Q34.2) WILD-TYPE"       "DEL PEAK 10(4Q34.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 10(4Q34.2) CNV" "DEL PEAK 10(4Q34.2) WILD-TYPE" 
                   TCGA-K4-A3WV 
      "DEL PEAK 10(4Q34.2) CNV" 
[1] "hr=" "1.3"
D38V2, continuous
D38V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(4Q34.2) CNV         14   45
  DEL PEAK 10(4Q34.2) WILD-TYPE   20   55
        clus
vv       DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE
  FEMALE                      14                            20
  MALE                        45                            55
D38V4, continuous
D38V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 10(4Q34.2) CNV       33  2 23
  DEL PEAK 10(4Q34.2) WILD-TYPE 44  3 28
D38V6, multiclass
    clus
vv   DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE
  M0                      33                            44
  M1                       2                             3
  MX                      23                            28
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 10(4Q34.2) CNV       30  7 14  1  5
  DEL PEAK 10(4Q34.2) WILD-TYPE 45  7 13  4  5
D38V7, multiclass
D38V8, continuous
D38V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 10(4Q34.2) CNV             0       19        14       23
  DEL PEAK 10(4Q34.2) WILD-TYPE       1       17        30       25
D38V10, multiclass
           clus
vv          DEL PEAK 10(4Q34.2) CNV DEL PEAK 10(4Q34.2) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       19                            17
  STAGE III                      14                            30
  STAGE IV                       23                            25

Clustering(39) Variable = Del Peak 11(5q11.2)
D39V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 11(5Q11.2) CNV       49 17
  DEL PEAK 11(5Q11.2) WILD-TYPE 44 17
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                           66                            61 
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                           17                            17 
$`DEL PEAK 11(5Q11.2) CNV`
TCGA-BL-A0C8 TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20T 
       12.79         6.58        19.00        26.10         5.06        14.89 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 
        5.06         8.35         5.88         3.65         4.64         2.01 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1A7 TCGA-DK-A1AD 
        0.46         0.43         5.19         2.14         8.98       100.47 
TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM 
       10.59       123.85        75.32         2.20         3.98         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV 
        8.22        10.49        37.84         5.52        11.51         9.67 
TCGA-DK-A3WX TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3B6 
       10.55        41.03        17.98        36.43         8.94         6.87 
TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SP TCGA-FD-A3SR 
        8.94        24.30        10.98         6.12         4.54        19.79 
TCGA-FD-A3SS TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-G2-A2EF 
        1.94         6.84        15.16         3.48         4.08        49.91 
TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3YS TCGA-GD-A2C5 
       26.93         7.04         0.82         2.86         1.08         7.69 
TCGA-GD-A3OP TCGA-GU-A42P TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QF TCGA-GV-A3QH 
        2.10         6.38         6.41         6.15         7.63         7.79 
TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WU TCGA-K4-A3WV 
        4.11         6.38         5.33         6.71         3.42         4.64 

$`DEL PEAK 11(5Q11.2) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P 
        7.33         2.66         6.74        11.93        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20X TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A27C 
       19.46         8.61         8.25         8.98         1.94         0.69 
TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 
       12.92         4.90         7.20         5.46         8.09         2.53 
TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF 
       31.40         7.04         8.91       118.88         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 
        6.64         1.81         7.76         8.28       131.15         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA 
        8.81         8.32         4.01        11.05         7.96        32.02 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A43N TCGA-FT-A3EE TCGA-G2-A2EJ 
        6.81         5.49        46.78         7.89         3.22        26.50 
TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-GC-A3I6 TCGA-GC-A3OO 
        5.65        32.78        17.26        20.12         2.24         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A3OQ TCGA-GD-A3OS 
        4.50         1.38         1.02         2.50         3.12         5.82 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QK TCGA-H4-A2HO 
        7.56         3.22         4.37         5.69         6.64         1.51 
TCGA-K4-A3WS 
        8.71 

      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                       123.85                        131.15 
      DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE 
                        6.855                         7.170 
[1] "0.4 - 123.8 (6.9)" "0.1 - 131.2 (7.2)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 11(5Q11.2) WILD-TYPE" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK 11(5Q11.2) CNV" "DEL PEAK 11(5Q11.2) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 11(5Q11.2) CNV"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK 11(5Q11.2) WILD-TYPE"       "DEL PEAK 11(5Q11.2) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK 11(5Q11.2) CNV" 
[1] "hr=" "1.2"
D39V2, continuous
D39V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 11(5Q11.2) CNV         15   56
  DEL PEAK 11(5Q11.2) WILD-TYPE   19   44
        clus
vv       DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE
  FEMALE                      15                            19
  MALE                        56                            44
D39V4, continuous
D39V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 11(5Q11.2) CNV       37  4 29
  DEL PEAK 11(5Q11.2) WILD-TYPE 40  1 22
D39V6, multiclass
    clus
vv   DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE
  M0                      37                            40
  M1                       4                             1
  MX                      29                            22
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 11(5Q11.2) CNV       33  9 17  3  8
  DEL PEAK 11(5Q11.2) WILD-TYPE 42  5 10  2  2
D39V7, multiclass
D39V8, continuous
D39V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 11(5Q11.2) CNV             1       22        15       29
  DEL PEAK 11(5Q11.2) WILD-TYPE       0       14        29       19
D39V10, multiclass
           clus
vv          DEL PEAK 11(5Q11.2) CNV DEL PEAK 11(5Q11.2) WILD-TYPE
  STAGE I                         1                             0
  STAGE II                       22                            14
  STAGE III                      15                            29
  STAGE IV                       29                            19

Clustering(40) Variable = Del Peak 12(5q35.1)
D40V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 12(5Q35.1) CNV       48 15
  DEL PEAK 12(5Q35.1) WILD-TYPE 45 19
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                           63                            64 
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                           15                            19 
$`DEL PEAK 12(5Q35.1) CNV`
TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20V TCGA-BT-A20W 
        6.58        19.00        26.10         5.06         5.06         8.35 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CU-A3QU TCGA-DK-A1A3 
        3.65         4.64         2.01         0.46         5.19         2.53 
TCGA-DK-A1A5 TCGA-DK-A1AA TCGA-DK-A1AD TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 
        2.14         7.04       100.47        10.59       123.85        75.32 
TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3WX 
        3.98         8.22        10.49        37.84         5.52        10.55 
TCGA-DK-A3X1 TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3NA 
       41.03        36.43         8.94         6.87         8.94        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A3SR 
       24.30        10.98         6.12         6.81         4.54        19.79 
TCGA-FD-A3SS TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-G2-A2EF 
        1.94         6.84        15.16         3.48         4.08        49.91 
TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RB 
       26.93         7.04        20.12         0.82         2.86         4.50 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P 
        1.38         1.02         1.08         7.69         2.10         6.38 
TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40E 
        6.41         6.15         5.69         7.63         7.79         6.38 
TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WU 
        5.33         6.71         3.42 

$`DEL PEAK 12(5Q35.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20O 
       12.79         7.33         2.66         6.74        11.93        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A2LA 
       17.85        19.46        14.89         8.61         8.25         5.88 
TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO 
        8.98         1.94         0.43         0.69        12.92         4.90 
TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AB 
        7.20         5.46         8.09        31.40         8.98         8.91 
TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 
      118.88         7.17         5.85         6.64         1.81         7.76 
TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY 
        2.20         7.82        11.51         9.67         8.28       131.15 
TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B7 TCGA-FD-A3B8 
       17.98         0.10         8.81         8.32         4.01        11.05 
TCGA-FD-A3N6 TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A43N TCGA-FT-A3EE TCGA-G2-A2EJ 
        7.96         5.49        46.78         7.89         3.22        26.50 
TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3WC 
        5.65        32.78        17.26         2.24         1.32         2.50 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3QI 
        3.12         5.82         7.56         3.22         4.37         4.11 
TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WV 
        6.64         1.51         8.71         4.64 

      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                         0.46                          0.10 
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                       123.85                        131.15 
      DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE 
                         6.71                          7.66 
[1] "0.5 - 123.8 (6.7)" "0.1 - 131.2 (7.7)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-K4-A3WV 
"DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-K4-A3WV 
"DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 12(5Q35.1) CNV" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 12(5Q35.1) WILD-TYPE" "DEL PEAK 12(5Q35.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 12(5Q35.1) CNV"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK 12(5Q35.1) WILD-TYPE"       "DEL PEAK 12(5Q35.1) CNV" 
                   TCGA-K4-A3WV 
"DEL PEAK 12(5Q35.1) WILD-TYPE" 
[1] "hr=" "1.5"
D40V2, continuous
D40V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 12(5Q35.1) CNV         13   55
  DEL PEAK 12(5Q35.1) WILD-TYPE   21   45
        clus
vv       DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE
  FEMALE                      13                            21
  MALE                        55                            45
D40V4, continuous
D40V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 12(5Q35.1) CNV       32  4 31
  DEL PEAK 12(5Q35.1) WILD-TYPE 45  1 20
D40V6, multiclass
    clus
vv   DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE
  M0                      32                            45
  M1                       4                             1
  MX                      31                            20
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 12(5Q35.1) CNV       33  8 15  4  7
  DEL PEAK 12(5Q35.1) WILD-TYPE 42  6 12  1  3
D40V7, multiclass
D40V8, continuous
D40V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 12(5Q35.1) CNV             0       22        15       28
  DEL PEAK 12(5Q35.1) WILD-TYPE       1       14        29       20
D40V10, multiclass
           clus
vv          DEL PEAK 12(5Q35.1) CNV DEL PEAK 12(5Q35.1) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       22                            14
  STAGE III                      15                            29
  STAGE IV                       28                            20

Clustering(41) Variable = Del Peak 13(6p25.3)
D41V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 13(6P25.3) CNV       31  6
  DEL PEAK 13(6P25.3) WILD-TYPE 62 28
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                           37                            90 
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                            6                            28 
$`DEL PEAK 13(6P25.3) CNV`
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-CU-A0YR 
        5.06         8.25         5.88         3.65         4.64         7.20 
TCGA-DK-A1A6 TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A2HX TCGA-DK-A2I1 
       31.40         8.91       118.88         7.17         1.81        10.59 
TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IT TCGA-DK-A3X1 TCGA-DK-A3X2 
        7.76       123.85         3.98         5.52        41.03        17.98 
TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SN 
        8.32         6.87         4.01        32.02        10.98         6.81 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EO TCGA-GD-A3OP TCGA-GD-A3OS 
        6.84        15.16         4.08        32.78         2.10         5.82 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        5.69         7.63         7.79         4.11         6.64         6.38 
TCGA-H4-A2HQ 
        6.71 

$`DEL PEAK 13(6P25.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
       19.00        26.10        12.16        17.85        19.46         5.06 
TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20W TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 
       14.89         8.61         8.35         8.98         1.94         2.01 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A3KJ 
        0.46         0.43         0.69        12.92         4.90         5.46 
TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 TCGA-DK-A1AA 
        5.19         8.09         2.53         2.14         8.98         7.04 
TCGA-DK-A1AD TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM 
      100.47         5.85         6.64        75.32         2.20         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW 
        8.22        10.49        37.84        11.51         9.67         8.28 
TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 
       10.55       131.15        36.43         0.10         8.81         8.94 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SJ TCGA-FD-A3SM TCGA-FD-A3SO 
       11.05         8.94         7.96        24.30         6.12         5.49 
TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3ZE 
        4.54        46.78        19.79         1.94         7.89         3.48 
TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES 
        3.22        49.91        26.50         5.65        26.93        17.26 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO 
        7.04        20.12         0.82         2.86         2.24         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 
        4.50         1.38         1.02         2.50         1.08         7.69 
TCGA-GD-A3OQ TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW 
        3.12         6.38         7.56         3.22         4.37         6.41 
TCGA-GV-A3JX TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.15         5.33         1.51         8.71         3.42         4.64 

      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                         1.81                          0.10 
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                       123.85                        131.15 
      DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE 
                         6.87                          7.04 
[1] "1.8 - 123.8 (6.9)" "0.1 - 131.2 (7.0)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK 13(6P25.3) CNV"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 13(6P25.3) CNV" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 13(6P25.3) WILD-TYPE"       "DEL PEAK 13(6P25.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
"DEL PEAK 13(6P25.3) WILD-TYPE" "DEL PEAK 13(6P25.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"DEL PEAK 13(6P25.3) WILD-TYPE" 
[1] "hr=" "2.1"
D41V2, continuous
D41V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 13(6P25.3) CNV         13   25
  DEL PEAK 13(6P25.3) WILD-TYPE   21   75
        clus
vv       DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE
  FEMALE                      13                            21
  MALE                        25                            75
D41V4, continuous
D41V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 13(6P25.3) CNV       21  2 15
  DEL PEAK 13(6P25.3) WILD-TYPE 56  3 36
D41V6, multiclass
    clus
vv   DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE
  M0                      21                            56
  M1                       2                             3
  MX                      15                            36
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 13(6P25.3) CNV       16  2 13  2  4
  DEL PEAK 13(6P25.3) WILD-TYPE 59 12 14  3  6
D41V7, multiclass
D41V8, continuous
D41V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 13(6P25.3) CNV             0        7        11       20
  DEL PEAK 13(6P25.3) WILD-TYPE       1       29        33       28
D41V10, multiclass
           clus
vv          DEL PEAK 13(6P25.3) CNV DEL PEAK 13(6P25.3) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                        7                            29
  STAGE III                      11                            33
  STAGE IV                       20                            28

Clustering(42) Variable = Del Peak 14(6q21)
D42V1, survival
                             sevent
clus2                          0  1
  DEL PEAK 14(6Q21) CNV       41 12
  DEL PEAK 14(6Q21) WILD-TYPE 52 22
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                         53                          74 
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                         12                          22 
$`DEL PEAK 14(6Q21) CNV`
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A2LD TCGA-BT-A3PH 
       19.00        26.10        14.89         5.06         3.65         4.64 
TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A6 
        1.94         0.46         0.69         5.19         2.53        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AB TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 
        8.98         8.91         1.81        10.59         7.76       123.85 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT 
       75.32         2.20         3.98        10.49        37.84         5.52 
TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3SJ TCGA-FD-A3SL 
       41.03        17.98        36.43         8.94        24.30        10.98 
TCGA-FD-A3SN TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43U TCGA-FJ-A3Z7 
        6.81        46.78        19.79         1.94         6.84        15.16 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3RD 
       32.78        17.26        20.12         0.82         2.24         1.02 
TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QF 
        2.10         6.38         3.22         6.41         6.15         7.63 
TCGA-GV-A3QH TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WV 
        7.79         6.38         5.33         6.71         4.64 

$`DEL PEAK 14(6Q21) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20W 
       12.16        17.85        19.46         5.06         8.61         8.35 
TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0EZ TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CU-A0YN 
        8.25         5.88         8.98         2.01         0.43        12.92 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1AA 
        4.90         7.20         5.46         8.09         2.14         7.04 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A3IM 
      118.88       100.47         7.17         5.85         6.64         7.82 
TCGA-DK-A3IN TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY 
        8.22        11.51         9.67         8.28        10.55       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.81         8.32         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP 
        8.94         7.96        32.02         6.12         5.49         4.54 
TCGA-FD-A43N TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ 
        7.89         3.48         4.08         3.22        49.91        26.50 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3OO TCGA-GC-A3RB 
        5.65        26.93         7.04         2.86         1.32         4.50 
TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS 
        1.38         2.50         1.08         7.69         3.12         5.82 
TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QI TCGA-GV-A3QK TCGA-H4-A2HO 
        7.56         4.37         5.69         4.11         6.64         1.51 
TCGA-K4-A3WS TCGA-K4-A3WU 
        8.71         3.42 

      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                       0.46                        0.10 
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                     123.85                      131.15 
      DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE 
                       6.84                        7.04 
[1] "0.5 - 123.8 (6.8)" "0.1 - 131.2 (7.0)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WV 
      "DEL PEAK 14(6Q21) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WV 
      "DEL PEAK 14(6Q21) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
      "DEL PEAK 14(6Q21) CNV" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
      "DEL PEAK 14(6Q21) CNV"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK 14(6Q21) WILD-TYPE"       "DEL PEAK 14(6Q21) CNV" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"DEL PEAK 14(6Q21) WILD-TYPE" "DEL PEAK 14(6Q21) WILD-TYPE" 
                 TCGA-K4-A3WV 
      "DEL PEAK 14(6Q21) CNV" 
[1] "hr=" "1.9"
D42V2, continuous
D42V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 14(6Q21) CNV         14   43
  DEL PEAK 14(6Q21) WILD-TYPE   20   57
        clus
vv       DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE
  FEMALE                    14                          20
  MALE                      43                          57
D42V4, continuous
D42V5, continuous
                             vv
clus                          M0 M1 MX
  DEL PEAK 14(6Q21) CNV       31  2 23
  DEL PEAK 14(6Q21) WILD-TYPE 46  3 28
D42V6, multiclass
    clus
vv   DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE
  M0                    31                          46
  M1                     2                           3
  MX                    23                          28
                             vv
clus                          N0 N1 N2 N3 NX
  DEL PEAK 14(6Q21) CNV       21  8 17  2  6
  DEL PEAK 14(6Q21) WILD-TYPE 54  6 10  3  4
D42V7, multiclass
D42V8, continuous
D42V9, continuous
                             vv
clus                          STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 14(6Q21) CNV             0       16         9       29
  DEL PEAK 14(6Q21) WILD-TYPE       1       20        35       19
D42V10, multiclass
           clus
vv          DEL PEAK 14(6Q21) CNV DEL PEAK 14(6Q21) WILD-TYPE
  STAGE I                       0                           1
  STAGE II                     16                          20
  STAGE III                     9                          35
  STAGE IV                     29                          19

Clustering(43) Variable = Del Peak 15(8p23.1)
D43V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 15(8P23.1) CNV       57 15
  DEL PEAK 15(8P23.1) WILD-TYPE 36 19
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                           72                            55 
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                           15                            19 
$`DEL PEAK 15(8P23.1) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A20J TCGA-BT-A20V TCGA-BT-A20W TCGA-C4-A0EZ 
       12.79         2.66        19.00         5.06         8.35         8.98 
TCGA-C4-A0F0 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ 
        1.94         0.43         0.69        12.92         7.20         5.46 
TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A7 TCGA-DK-A1AC 
        5.19         8.09         2.53         2.14         8.98       118.88 
TCGA-DK-A1AD TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 
      100.47         6.64         1.81        10.59       123.85        75.32 
TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT 
        2.20         3.98         7.82         8.22        10.49         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 
       11.51         9.67         8.32         8.94         6.87         4.01 
TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO 
        8.94        32.02        24.30        10.98         6.12         5.49 
TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZE 
        4.54        19.79         1.94         7.89        15.16         3.48 
TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EK TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RB 
        4.08        49.91         5.65        20.12         0.82         4.50 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP 
        1.38         1.02         2.50         1.08         7.69         2.10 
TCGA-GD-A3OQ TCGA-GU-A42P TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        3.12         6.38         6.15         5.69         7.63         7.79 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.38         5.33         6.71         8.71         3.42         4.64 

$`DEL PEAK 15(8P23.1) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20N TCGA-BT-A20O 
        7.33         6.74         6.58        11.93        26.10        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20X 
       17.85        19.46         5.06        14.89         8.61         8.25 
TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CU-A0YO 
        5.88         3.65         4.64         2.01         0.46         4.90 
TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A2I2 
       31.40         7.04         8.91         7.17         5.85         7.76 
TCGA-DK-A3IS TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 
       37.84         8.28        10.55       131.15        41.03        17.98 
TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3SN 
       36.43         0.10         8.81        11.05         7.96         6.81 
TCGA-FD-A3SQ TCGA-FD-A43U TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A2EO 
       46.78         6.84         3.22        26.50        26.93        32.78 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GD-A3OS 
       17.26         7.04         2.86         2.24         1.32         5.82 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QI TCGA-GV-A3QK 
        7.56         3.22         4.37         6.41         4.11         6.64 
TCGA-H4-A2HO 
        1.51 

      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                         0.43                          0.10 
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                       123.85                        131.15 
      DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE 
                         6.51                          7.33 
[1] "0.4 - 123.8 (6.5)" "0.1 - 131.2 (7.3)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 15(8P23.1) CNV" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 15(8P23.1) WILD-TYPE" "DEL PEAK 15(8P23.1) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 15(8P23.1) WILD-TYPE"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 15(8P23.1) CNV"       "DEL PEAK 15(8P23.1) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK 15(8P23.1) CNV" 
[1] "hr=" "1.3"
D43V2, continuous
D43V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 15(8P23.1) CNV         14   61
  DEL PEAK 15(8P23.1) WILD-TYPE   20   39
        clus
vv       DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE
  FEMALE                      14                            20
  MALE                        61                            39
D43V4, continuous
D43V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 15(8P23.1) CNV       39  5 30
  DEL PEAK 15(8P23.1) WILD-TYPE 38  0 21
D43V6, multiclass
    clus
vv   DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE
  M0                      39                            38
  M1                       5                             0
  MX                      30                            21
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 15(8P23.1) CNV       38  8 17  4  7
  DEL PEAK 15(8P23.1) WILD-TYPE 37  6 10  1  3
D43V7, multiclass
D43V8, continuous
D43V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 15(8P23.1) CNV             1       21        20       30
  DEL PEAK 15(8P23.1) WILD-TYPE       0       15        24       18
D43V10, multiclass
           clus
vv          DEL PEAK 15(8P23.1) CNV DEL PEAK 15(8P23.1) WILD-TYPE
  STAGE I                         1                             0
  STAGE II                       21                            15
  STAGE III                      20                            24
  STAGE IV                       30                            18

Clustering(44) Variable = Del Peak 16(9p23)
D44V1, survival
                             sevent
clus2                          0  1
  DEL PEAK 16(9P23) CNV       42 13
  DEL PEAK 16(9P23) WILD-TYPE 51 21
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                         55                          72 
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                         13                          21 
$`DEL PEAK 16(9P23) CNV`
TCGA-BL-A0C8 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20Q TCGA-BT-A20T 
       12.79        11.93        19.00        26.10        19.46        14.89 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A27C 
        8.35         8.25         5.88         1.94         0.46         0.69 
TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1AA TCGA-DK-A1AB 
        4.90         5.46         8.09         2.53         7.04         8.91 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A3IK TCGA-DK-A3IN TCGA-DK-A3IQ 
        5.85         6.64        10.59         2.20         8.22        10.49 
TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3WX TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC 
       37.84         5.52        10.55        41.03        17.98        36.43 
TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SQ TCGA-FD-A3SR 
        8.32         8.94         6.12         6.81        46.78        19.79 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3ZE TCGA-G2-A2EJ TCGA-G2-A2EO TCGA-G2-A3IB 
        1.94         7.89         3.48        26.50        32.78         7.04 
TCGA-G2-A3VY TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q 
        0.82         1.02         1.08         3.12         5.82         7.56 
TCGA-GV-A3JW TCGA-GV-A3QH TCGA-GV-A3QK TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        6.41         7.79         6.64         6.71         8.71         3.42 
TCGA-K4-A3WV 
        4.64 

$`DEL PEAK 16(9P23) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20O TCGA-BT-A20P 
        7.33         2.66         6.74         6.58        12.16        17.85 
TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ 
        5.06         8.61         5.06         3.65         4.64         8.98 
TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3QU TCGA-DK-A1A5 
        2.01         0.43        12.92         7.20         5.19         2.14 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A2HX 
       31.40         8.98       118.88       100.47         7.17         1.81 
TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IU 
        7.76       123.85        75.32         3.98         7.82        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B6 
        9.67         8.28       131.15         0.10         8.81         6.87 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ 
        4.01        11.05         8.94         7.96        32.02        24.30 
TCGA-FD-A3SL TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       10.98         5.49         4.54         6.84        15.16         4.08 
TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES TCGA-G2-A3IE 
        3.22        49.91         5.65        26.93        17.26        20.12 
TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC 
        2.86         2.24         1.32         4.50         1.38         2.50 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JX 
        7.69         2.10         6.38         3.22         4.37         6.15 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO 
        5.69         7.63         4.11         6.38         5.33         1.51 

      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                       0.46                        0.10 
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                      46.78                      131.15 
      DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE 
                       7.56                        6.79 
[1] "0.5 - 46.8 (7.6)"  "0.1 - 131.2 (6.8)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-K4-A3WV 
      "DEL PEAK 16(9P23) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-K4-A3WV 
      "DEL PEAK 16(9P23) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
      "DEL PEAK 16(9P23) CNV" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"DEL PEAK 16(9P23) WILD-TYPE" "DEL PEAK 16(9P23) WILD-TYPE" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK 16(9P23) WILD-TYPE"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
      "DEL PEAK 16(9P23) CNV"       "DEL PEAK 16(9P23) CNV" 
                 TCGA-K4-A3WV 
      "DEL PEAK 16(9P23) CNV" 
[1] "hr=" "1.3"
D44V2, continuous
D44V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 16(9P23) CNV         14   47
  DEL PEAK 16(9P23) WILD-TYPE   20   53
        clus
vv       DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE
  FEMALE                    14                          20
  MALE                      47                          53
D44V4, continuous
D44V5, continuous
                             vv
clus                          M0 M1 MX
  DEL PEAK 16(9P23) CNV       36  3 21
  DEL PEAK 16(9P23) WILD-TYPE 41  2 30
D44V6, multiclass
    clus
vv   DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE
  M0                    36                          41
  M1                     3                           2
  MX                    21                          30
                             vv
clus                          N0 N1 N2 N3 NX
  DEL PEAK 16(9P23) CNV       33  5 12  2  7
  DEL PEAK 16(9P23) WILD-TYPE 42  9 15  3  3
D44V7, multiclass
D44V8, continuous
D44V9, continuous
                             vv
clus                          STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 16(9P23) CNV             1       16        19       21
  DEL PEAK 16(9P23) WILD-TYPE       0       20        25       27
D44V10, multiclass
           clus
vv          DEL PEAK 16(9P23) CNV DEL PEAK 16(9P23) WILD-TYPE
  STAGE I                       1                           0
  STAGE II                     16                          20
  STAGE III                    19                          25
  STAGE IV                     21                          27

Clustering(45) Variable = Del Peak 17(9p21.3)
D45V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 17(9P21.3) CNV       52 21
  DEL PEAK 17(9P21.3) WILD-TYPE 41 13
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                           73                            54 
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                           21                            13 
$`DEL PEAK 17(9P21.3) CNV`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         2.66         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V 
       26.10        17.85        19.46        14.89         8.61         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A27C 
        8.35         8.25         1.94         2.01         0.46         0.69 
TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1AA 
        4.90         5.46         8.09         2.53         2.14         7.04 
TCGA-DK-A1AB TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A3IK 
        8.91         7.17         5.85         6.64        10.59         2.20 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3WW TCGA-DK-A3WX 
        8.22        10.49        37.84         5.52         8.28        10.55 
TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B5 TCGA-FD-A3N6 TCGA-FD-A3NA 
       41.03        17.98        36.43         8.94         7.96        32.02 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS 
        6.12         6.81         4.54        46.78        19.79         1.94 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-G2-A2EF TCGA-G2-A2EO 
        7.89         6.84        15.16         3.48        49.91        32.78 
TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RD TCGA-GC-A3YS 
        7.04        20.12         0.82         2.86         1.02         1.08 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3QF 
        3.12         5.82         7.56         3.22         6.41         7.63 
TCGA-GV-A3QH TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        7.79         6.64         6.38         6.71         8.71         3.42 
TCGA-K4-A3WV 
        4.64 

$`DEL PEAK 17(9P21.3) WILD-TYPE`
TCGA-BL-A3JM TCGA-BT-A20O TCGA-BT-A20R TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH 
        6.74        12.16         5.06         5.88         3.65         4.64 
TCGA-C4-A0EZ TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3QU TCGA-DK-A1A6 
        8.98         0.43        12.92         7.20         5.19        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 
        8.98       118.88       100.47         1.81         7.76       123.85 
TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WY 
       75.32         3.98         7.82        11.51         9.67       131.15 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.81         8.32         6.87         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SO TCGA-FJ-A3ZF TCGA-FT-A3EE 
        8.94        24.30        10.98         5.49         4.08         3.22 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2ES TCGA-GC-A3I6 TCGA-GC-A3OO 
       26.50         5.65        26.93        17.26         2.24         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P 
        4.50         1.38         2.50         7.69         2.10         6.38 
TCGA-GV-A3JV TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HO 
        4.37         6.15         5.69         4.11         5.33         1.51 

      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                         0.46                          0.10 
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                        49.91                        131.15 
      DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE 
                         7.17                          6.56 
[1] "0.5 - 49.9 (7.2)"  "0.1 - 131.2 (6.6)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
"DEL PEAK 17(9P21.3) WILD-TYPE" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
      "DEL PEAK 17(9P21.3) CNV" "DEL PEAK 17(9P21.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 17(9P21.3) WILD-TYPE"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 17(9P21.3) CNV"       "DEL PEAK 17(9P21.3) CNV" 
                   TCGA-K4-A3WV 
      "DEL PEAK 17(9P21.3) CNV" 
[1] "hr=" "1.3"
D45V2, continuous
D45V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 17(9P21.3) CNV         18   61
  DEL PEAK 17(9P21.3) WILD-TYPE   16   39
        clus
vv       DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE
  FEMALE                      18                            16
  MALE                        61                            39
D45V4, continuous
D45V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 17(9P21.3) CNV       45  3 30
  DEL PEAK 17(9P21.3) WILD-TYPE 32  2 21
D45V6, multiclass
    clus
vv   DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE
  M0                      45                            32
  M1                       3                             2
  MX                      30                            21
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 17(9P21.3) CNV       43  5 17  2  9
  DEL PEAK 17(9P21.3) WILD-TYPE 32  9 10  3  1
D45V7, multiclass
D45V8, continuous
D45V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 17(9P21.3) CNV             1       23        25       26
  DEL PEAK 17(9P21.3) WILD-TYPE       0       13        19       22
D45V10, multiclass
           clus
vv          DEL PEAK 17(9P21.3) CNV DEL PEAK 17(9P21.3) WILD-TYPE
  STAGE I                         1                             0
  STAGE II                       23                            13
  STAGE III                      25                            19
  STAGE IV                       26                            22

Clustering(46) Variable = Del Peak 18(10p12.1)
D46V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 18(10P12.1) CNV       22  6
  DEL PEAK 18(10P12.1) WILD-TYPE 71 28
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                            28                             99 
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                             6                             28 
$`DEL PEAK 18(10P12.1) CNV`
TCGA-BT-A20U TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-CF-A27C TCGA-CU-A0YR TCGA-CU-A3KJ 
        8.61         5.88         1.94         0.69         7.20         5.46 
TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A3IK TCGA-DK-A3IS TCGA-E5-A2PC TCGA-FD-A3B4 
        1.81         7.76         2.20        37.84        36.43         8.32 
TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N 
        8.94         4.01         8.94        19.79         1.94         7.89 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM 
       15.16         3.48         4.08        26.93         7.04         2.86 
TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GV-A40G TCGA-H4-A2HQ 
        1.38         2.50         5.33         6.71 

$`DEL PEAK 18(10P12.1) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
       19.00        26.10        12.16        17.85        19.46         5.06 
TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LD TCGA-BT-A3PH 
       14.89         5.06         8.35         8.25         3.65         4.64 
TCGA-C4-A0EZ TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YO 
        8.98         2.01         0.46         0.43        12.92         4.90 
TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 
        5.19         8.09         2.53         2.14        31.40         8.98 
TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
        7.04         8.91       118.88       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IL TCGA-DK-A3IM 
        6.64        10.59       123.85        75.32         3.98         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW 
        8.22        10.49         5.52        11.51         9.67         8.28 
TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B3 
       10.55       131.15        41.03        17.98         0.10         8.81 
TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL 
        6.87        11.05         7.96        32.02        24.30        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43U 
        6.12         6.81         5.49         4.54        46.78         6.84 
TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES 
        3.22        49.91        26.50         5.65        32.78        17.26 
TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RD 
       20.12         0.82         2.24         1.32         4.50         1.02 
TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P 
        1.08         7.69         2.10         3.12         5.82         6.38 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ 
        7.56         3.22         4.37         6.41         6.15         5.69 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO 
        7.63         7.79         4.11         6.64         6.38         1.51 
TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        8.71         3.42         4.64 

      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                          0.69                           0.10 
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                         37.84                         131.15 
      DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE 
                         6.295                          7.170 
[1] "0.7 - 37.8 (6.3)"  "0.1 - 131.2 (7.2)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 18(10P12.1) CNV"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK 18(10P12.1) CNV" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 18(10P12.1) WILD-TYPE"       "DEL PEAK 18(10P12.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 18(10P12.1) WILD-TYPE" "DEL PEAK 18(10P12.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 18(10P12.1) WILD-TYPE" 
[1] "hr=" "1"  
D46V2, continuous
D46V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 18(10P12.1) CNV          7   21
  DEL PEAK 18(10P12.1) WILD-TYPE   27   79
        clus
vv       DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE
  FEMALE                        7                             27
  MALE                         21                             79
D46V4, continuous
D46V5, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 18(10P12.1) CNV       14  2 12
  DEL PEAK 18(10P12.1) WILD-TYPE 63  3 39
D46V6, multiclass
    clus
vv   DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE
  M0                       14                             63
  M1                        2                              3
  MX                       12                             39
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 18(10P12.1) CNV       16  2  5  3  2
  DEL PEAK 18(10P12.1) WILD-TYPE 59 12 22  2  8
D46V7, multiclass
D46V8, continuous
D46V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 18(10P12.1) CNV             0        8         8       11
  DEL PEAK 18(10P12.1) WILD-TYPE       1       28        36       37
D46V10, multiclass
           clus
vv          DEL PEAK 18(10P12.1) CNV DEL PEAK 18(10P12.1) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                         8                             28
  STAGE III                        8                             36
  STAGE IV                        11                             37

Clustering(47) Variable = Del Peak 19(10q23.31)
D47V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 19(10Q23.31) CNV       43 14
  DEL PEAK 19(10Q23.31) WILD-TYPE 50 20
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                             57                              70 
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                             14                              20 
$`DEL PEAK 19(10Q23.31) CNV`
TCGA-BL-A0C8 TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W 
       12.79        26.10         5.06         8.61         5.06         8.35 
TCGA-BT-A2LD TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A3KJ 
        3.65         1.94         2.01         0.69         4.90         5.46 
TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1A7 TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I2 
        5.19         2.14         8.98       100.47         1.81         7.76 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IS 
       75.32         2.20         3.98         7.82         8.22        37.84 
TCGA-DK-A3IV TCGA-E5-A2PC TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SR 
        9.67        36.43         6.87         8.94        24.30        19.79 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF 
        1.94         7.89         6.84        15.16         3.48         4.08 
TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM 
        5.65        26.93         7.04        20.12         0.82         2.86 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A3OP TCGA-GU-A42P TCGA-GV-A3JW 
        1.38         1.02         2.50         2.10         6.38         6.41 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40G 
        6.15         5.69         7.63         7.79         4.11         5.33 
TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        6.71         8.71         3.42 

$`DEL PEAK 19(10Q23.31) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
        7.33         2.66         6.74         6.58        11.93        19.00 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20X TCGA-BT-A2LA 
       12.16        17.85        19.46        14.89         8.25         5.88 
TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR 
        4.64         8.98         0.46         0.43        12.92         7.20 
TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AC 
        8.09         2.53        31.40         7.04         8.91       118.88 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I4 TCGA-DK-A3IQ 
        7.17         5.85         6.64        10.59       123.85        10.49 
TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 
        5.52        11.51         8.28        10.55       131.15        41.03 
TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B7 
       17.98         0.10         8.81         8.32         8.94         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN 
       11.05         7.96        32.02        10.98         6.12         6.81 
TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ 
        5.49         4.54        46.78         3.22        49.91        26.50 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3YS 
       32.78        17.26         2.24         1.32         4.50         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV 
        7.69         3.12         5.82         7.56         3.22         4.37 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO TCGA-K4-A3WV 
        6.64         6.38         1.51         4.64 

      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                           0.69                            0.10 
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                         100.47                          131.15 
      DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE 
                          6.380                           7.625 
[1] "0.7 - 100.5 (6.4)" "0.1 - 131.2 (7.6)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-K4-A3WV 
"DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-K4-A3WV 
"DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
"DEL PEAK 19(10Q23.31) WILD-TYPE" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "DEL PEAK 19(10Q23.31) CNV" "DEL PEAK 19(10Q23.31) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"DEL PEAK 19(10Q23.31) WILD-TYPE"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
      "DEL PEAK 19(10Q23.31) CNV"       "DEL PEAK 19(10Q23.31) CNV" 
                     TCGA-K4-A3WV 
"DEL PEAK 19(10Q23.31) WILD-TYPE" 
[1] "hr=" "1.1"
D47V2, continuous
D47V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 19(10Q23.31) CNV         14   44
  DEL PEAK 19(10Q23.31) WILD-TYPE   20   56
        clus
vv       DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE
  FEMALE                        14                              20
  MALE                          44                              56
D47V4, continuous
D47V5, continuous
                                 vv
clus                              M0 M1 MX
  DEL PEAK 19(10Q23.31) CNV       31  2 24
  DEL PEAK 19(10Q23.31) WILD-TYPE 46  3 27
D47V6, multiclass
    clus
vv   DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE
  M0                        31                              46
  M1                         2                               3
  MX                        24                              27
                                 vv
clus                              N0 N1 N2 N3 NX
  DEL PEAK 19(10Q23.31) CNV       26  6 13  4  8
  DEL PEAK 19(10Q23.31) WILD-TYPE 49  8 14  1  2
D47V7, multiclass
D47V8, continuous
D47V9, continuous
                                 vv
clus                              STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 19(10Q23.31) CNV             1       18        13       24
  DEL PEAK 19(10Q23.31) WILD-TYPE       0       18        31       24
D47V10, multiclass
           clus
vv          DEL PEAK 19(10Q23.31) CNV DEL PEAK 19(10Q23.31) WILD-TYPE
  STAGE I                           1                               0
  STAGE II                         18                              18
  STAGE III                        13                              31
  STAGE IV                         24                              24

Clustering(48) Variable = Del Peak 20(11p15.5)
D48V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 20(11P15.5) CNV       45 17
  DEL PEAK 20(11P15.5) WILD-TYPE 48 17
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                            62                             65 
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                            17                             17 
$`DEL PEAK 20(11P15.5) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20T 
       12.79         2.66        19.00        26.10         5.06        14.89 
TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 
        5.06         8.35         4.64         8.98         1.94         2.01 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-DK-A1A5 
        0.46         0.43         0.69         7.20         5.46         2.14 
TCGA-DK-A1A7 TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AF TCGA-DK-A2HX TCGA-DK-A2I1 
        8.98         8.91       100.47         5.85         1.81        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ 
       75.32         2.20         3.98         7.82         8.22        10.49 
TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3X2 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3SJ 
       37.84         5.52        17.98         8.94         4.01        24.30 
TCGA-FD-A3SL TCGA-FD-A3SN TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3Z7 
       10.98         6.81        19.79         1.94         7.89        15.16 
TCGA-FJ-A3ZE TCGA-G2-A2EO TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 
        3.48        32.78        20.12         0.82         2.86         2.24 
TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42Q TCGA-GU-A42R 
        1.02         1.08         7.69         2.10         7.56         3.22 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QF TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ 
        4.37         6.41         7.63         6.38         5.33         6.71 
TCGA-K4-A3WS TCGA-K4-A3WV 
        8.71         4.64 

$`DEL PEAK 20(11P15.5) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P 
        7.33         6.74         6.58        11.93        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-CU-A0YN 
       19.46         8.61         8.25         5.88         3.65        12.92 
TCGA-CU-A0YO TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1AA 
        4.90         5.19         8.09         2.53        31.40         7.04 
TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AG TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IU 
      118.88         7.17         6.64         7.76       123.85        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-E5-A2PC 
        9.67         8.28        10.55       131.15        41.03        36.43 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 
        0.10         8.81         8.32         6.87        11.05         8.94 
TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
        7.96        32.02         6.12         5.49         4.54        46.78 
TCGA-FD-A43U TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
        6.84         4.08         3.22        49.91        26.50         5.65 
TCGA-G2-A2EL TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC 
       26.93        17.26         7.04         1.32         4.50         1.38 
TCGA-GC-A3WC TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JX TCGA-GV-A3JZ 
        2.50         3.12         5.82         6.38         6.15         5.69 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WU 
        7.79         4.11         6.64         1.51         3.42 

      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                        100.47                         131.15 
      DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE 
                          6.56                           7.17 
[1] "0.4 - 100.5 (6.6)" "0.1 - 131.2 (7.2)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 20(11P15.5) WILD-TYPE" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "DEL PEAK 20(11P15.5) CNV"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 20(11P15.5) WILD-TYPE"       "DEL PEAK 20(11P15.5) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 20(11P15.5) CNV" "DEL PEAK 20(11P15.5) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK 20(11P15.5) CNV" 
[1] "hr=" "1.3"
D48V2, continuous
D48V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 20(11P15.5) CNV         16   52
  DEL PEAK 20(11P15.5) WILD-TYPE   18   48
        clus
vv       DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE
  FEMALE                       16                             18
  MALE                         52                             48
D48V4, continuous
D48V5, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 20(11P15.5) CNV       39  4 24
  DEL PEAK 20(11P15.5) WILD-TYPE 38  1 27
D48V6, multiclass
    clus
vv   DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE
  M0                       39                             38
  M1                        4                              1
  MX                       24                             27
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 20(11P15.5) CNV       31  7 19  2  6
  DEL PEAK 20(11P15.5) WILD-TYPE 44  7  8  3  4
D48V7, multiclass
D48V8, continuous
D48V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 20(11P15.5) CNV             1       18        15       30
  DEL PEAK 20(11P15.5) WILD-TYPE       0       18        29       18
D48V10, multiclass
           clus
vv          DEL PEAK 20(11P15.5) CNV DEL PEAK 20(11P15.5) WILD-TYPE
  STAGE I                          1                              0
  STAGE II                        18                             18
  STAGE III                       15                             29
  STAGE IV                        30                             18

Clustering(49) Variable = Del Peak 21(11q25)
D49V1, survival
                              sevent
clus2                           0  1
  DEL PEAK 21(11Q25) CNV       29 10
  DEL PEAK 21(11Q25) WILD-TYPE 64 24
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                          39                           88 
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                          10                           24 
$`DEL PEAK 21(11Q25) CNV`
TCGA-BL-A0C8 TCGA-BT-A20J TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ 
       12.79        19.00         8.35         5.88         4.64         8.98 
TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-DK-A1A5 TCGA-DK-A1A6 
        0.43         0.69        12.92         5.46         2.14        31.40 
TCGA-DK-A1AB TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-E5-A2PC 
        8.91         7.82         8.22        10.49        37.84        36.43 
TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3SJ TCGA-FD-A43N TCGA-G2-A2ES TCGA-G2-A3IB 
        8.94         4.01        24.30         7.89        17.26         7.04 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP 
        0.82         2.86         1.02         1.08         7.69         2.10 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QK TCGA-GV-A40E 
        7.56         3.22         4.37         6.41         6.64         6.38 
TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WV 
        5.33         6.71         4.64 

$`DEL PEAK 21(11Q25) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20N 
        7.33         2.66         6.74         6.58        11.93        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U 
       12.16        17.85        19.46         5.06        14.89         8.61 
TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A2LD TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR 
        5.06         8.25         3.65         1.94         2.01         0.46 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A7 
        4.90         7.20         5.19         8.09         2.53         8.98 
TCGA-DK-A1AA TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG 
        7.04       118.88       100.47         7.17         5.85         6.64 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK 
        1.81        10.59         7.76       123.85        75.32         2.20 
TCGA-DK-A3IL TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX 
        3.98         5.52        11.51         9.67         8.28        10.55 
TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 
      131.15        41.03        17.98         0.10         8.81         8.32 
TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL 
        6.87        11.05         8.94         7.96        32.02        10.98 
TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR 
        6.12         6.81         5.49         4.54        46.78        19.79 
TCGA-FD-A3SS TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE 
        1.94         6.84        15.16         3.48         4.08         3.22 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A3IE 
       49.91        26.50         5.65        26.93        32.78        20.12 
TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GD-A3OQ 
        2.24         1.32         4.50         1.38         2.50         3.12 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH 
        5.82         6.38         6.15         5.69         7.63         7.79 
TCGA-GV-A3QI TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        4.11         1.51         8.71         3.42 

      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                        0.43                         0.10 
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                       37.84                       131.15 
      DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE 
                       6.710                        7.105 
[1] "0.4 - 37.8 (6.7)"  "0.1 - 131.2 (7.1)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-K4-A3WV 
      "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-K4-A3WV 
      "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "DEL PEAK 21(11Q25) CNV" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "DEL PEAK 21(11Q25) CNV"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 21(11Q25) WILD-TYPE"       "DEL PEAK 21(11Q25) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"DEL PEAK 21(11Q25) WILD-TYPE" "DEL PEAK 21(11Q25) WILD-TYPE" 
                  TCGA-K4-A3WV 
      "DEL PEAK 21(11Q25) CNV" 
[1] "hr=" "1.2"
D49V2, continuous
D49V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 21(11Q25) CNV         10   32
  DEL PEAK 21(11Q25) WILD-TYPE   24   68
        clus
vv       DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE
  FEMALE                     10                           24
  MALE                       32                           68
D49V4, continuous
D49V5, continuous
                              vv
clus                           M0 M1 MX
  DEL PEAK 21(11Q25) CNV       21  2 18
  DEL PEAK 21(11Q25) WILD-TYPE 56  3 33
D49V6, multiclass
    clus
vv   DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE
  M0                     21                           56
  M1                      2                            3
  MX                     18                           33
                              vv
clus                           N0 N1 N2 N3 NX
  DEL PEAK 21(11Q25) CNV       22  6  6  0  5
  DEL PEAK 21(11Q25) WILD-TYPE 53  8 21  5  5
D49V7, multiclass
D49V8, continuous
D49V9, continuous
                              vv
clus                           STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 21(11Q25) CNV             1       14        11       13
  DEL PEAK 21(11Q25) WILD-TYPE       0       22        33       35
D49V10, multiclass
           clus
vv          DEL PEAK 21(11Q25) CNV DEL PEAK 21(11Q25) WILD-TYPE
  STAGE I                        1                            0
  STAGE II                      14                           22
  STAGE III                     11                           33
  STAGE IV                      13                           35

Clustering(50) Variable = Del Peak 22(13q14.2)
D50V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 22(13Q14.2) CNV       32 18
  DEL PEAK 22(13Q14.2) WILD-TYPE 61 16
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                            50                             77 
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                            18                             16 
$`DEL PEAK 22(13Q14.2) CNV`
TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20V 
        2.66         6.74        26.10         5.06        14.89         5.06 
TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HS 
        8.25         5.88         4.64         8.98         1.94         0.43 
TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE 
        5.19         2.53         8.98       118.88       100.47         7.17 
TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IM 
        1.81         7.76       123.85        75.32         2.20         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IV TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B3 
        8.22        10.49         9.67        17.98        36.43         8.81 
TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3N5 TCGA-FD-A3SJ TCGA-FD-A3SN 
        8.94         6.87         4.01         8.94        24.30         6.81 
TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZF TCGA-G2-A2EO TCGA-G2-A2ES 
       46.78        19.79         1.94         4.08        32.78        17.26 
TCGA-GC-A3BM TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GV-A3JW 
        2.86         1.32         4.50         1.08         2.10         6.41 
TCGA-GV-A3JX TCGA-GV-A3QI 
        6.15         4.11 

$`DEL PEAK 22(13Q14.2) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O 
       12.79         7.33         6.58        11.93        19.00        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A2LD TCGA-C4-A0F6 
       17.85        19.46         8.61         8.35         3.65         2.01 
TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ 
        0.46         0.69        12.92         4.90         7.20         5.46 
TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AF 
        8.09         2.14        31.40         7.04         8.91         5.85 
TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A3IL TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU 
        6.64        10.59         3.98        37.84         5.52        11.51 
TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-E7-A3Y1 TCGA-FD-A3B4 
        8.28        10.55       131.15        41.03         0.10         8.32 
TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO 
       11.05         7.96        32.02        10.98         6.12         5.49 
TCGA-FD-A3SP TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FT-A3EE 
        4.54         7.89         6.84        15.16         3.48         3.22 
TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A3IB TCGA-G2-A3IE 
       49.91        26.50         5.65        26.93         7.04        20.12 
TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A2C5 
        0.82         2.24         1.38         1.02         2.50         7.69 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV 
        3.12         5.82         6.38         7.56         3.22         4.37 
TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G 
        5.69         7.63         7.79         6.64         6.38         5.33 
TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        1.51         6.71         8.71         3.42         4.64 

      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                        123.85                         131.15 
      DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE 
                          7.02                           7.04 
[1] "0.4 - 123.8 (7.0)" "0.1 - 131.2 (7.0)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
      "DEL PEAK 22(13Q14.2) CNV"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 22(13Q14.2) WILD-TYPE"       "DEL PEAK 22(13Q14.2) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK 22(13Q14.2) CNV" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 22(13Q14.2) WILD-TYPE" "DEL PEAK 22(13Q14.2) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 22(13Q14.2) WILD-TYPE" 
[1] "hr=" "1.4"
D50V2, continuous
D50V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 22(13Q14.2) CNV         10   42
  DEL PEAK 22(13Q14.2) WILD-TYPE   24   58
        clus
vv       DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE
  FEMALE                       10                             24
  MALE                         42                             58
D50V4, continuous
D50V5, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 22(13Q14.2) CNV       32  1 19
  DEL PEAK 22(13Q14.2) WILD-TYPE 45  4 32
D50V6, multiclass
    clus
vv   DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE
  M0                       32                             45
  M1                        1                              4
  MX                       19                             32
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 22(13Q14.2) CNV       24  8 15  2  3
  DEL PEAK 22(13Q14.2) WILD-TYPE 51  6 12  3  7
D50V7, multiclass
D50V8, continuous
D50V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 22(13Q14.2) CNV             0        9        16       25
  DEL PEAK 22(13Q14.2) WILD-TYPE       1       27        28       23
D50V10, multiclass
           clus
vv          DEL PEAK 22(13Q14.2) CNV DEL PEAK 22(13Q14.2) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                         9                             27
  STAGE III                       16                             28
  STAGE IV                        25                             23

Clustering(51) Variable = Del Peak 23(14q12)
D51V1, survival
                              sevent
clus2                           0  1
  DEL PEAK 23(14Q12) CNV       27 10
  DEL PEAK 23(14Q12) WILD-TYPE 66 24
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                          37                           90 
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                          10                           24 
$`DEL PEAK 23(14Q12) CNV`
TCGA-BT-A20J TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A2LD TCGA-CF-A1HR TCGA-CU-A0YO 
       19.00        14.89         5.06         3.65         0.46         4.90 
TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2I1 
        5.19         2.53         2.14       118.88       100.47        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3X1 TCGA-DK-A3X2 
       75.32         2.20        10.49        37.84        41.03        17.98 
TCGA-FD-A3B5 TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A43U TCGA-FJ-A3Z7 
        8.94         4.54        46.78        19.79         6.84        15.16 
TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RB TCGA-GC-A3RD 
        4.08        49.91        20.12         0.82         4.50         1.02 
TCGA-GU-A42Q TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HQ 
        7.56         5.69         7.63         6.64         6.38         6.71 
TCGA-K4-A3WU 
        3.42 

$`DEL PEAK 23(14Q12) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U 
       26.10        12.16        17.85        19.46         5.06         8.61 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 
        8.35         8.25         5.88         4.64         8.98         1.94 
TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YR TCGA-CU-A3KJ 
        2.01         0.43         0.69        12.92         7.20         5.46 
TCGA-CU-A3YL TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AE 
        8.09        31.40         8.98         7.04         8.91         7.17 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL 
        5.85         6.64         1.81         7.76       123.85         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW 
        7.82         8.22         5.52        11.51         9.67         8.28 
TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 
       10.55       131.15        36.43         0.10         8.81         8.32 
TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA 
        6.87         4.01        11.05         8.94         7.96        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SS 
       24.30        10.98         6.12         6.81         5.49         1.94 
TCGA-FD-A43N TCGA-FJ-A3ZE TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL 
        7.89         3.48         3.22        26.50         5.65        26.93 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO 
       32.78        17.26         7.04         2.86         2.24         1.32 
TCGA-GC-A3RC TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ 
        1.38         2.50         1.08         7.69         2.10         3.12 
TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX 
        5.82         6.38         3.22         4.37         6.41         6.15 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WV 
        7.79         4.11         5.33         1.51         8.71         4.64 

      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                        0.46                         0.10 
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                      118.88                       131.15 
      DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE 
                        6.84                         7.04 
[1] "0.5 - 118.9 (6.8)" "0.1 - 131.2 (7.0)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-K4-A3WV 
"DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-K4-A3WV 
"DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 23(14Q12) CNV"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"DEL PEAK 23(14Q12) WILD-TYPE" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "DEL PEAK 23(14Q12) CNV" "DEL PEAK 23(14Q12) WILD-TYPE" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"DEL PEAK 23(14Q12) WILD-TYPE"       "DEL PEAK 23(14Q12) CNV" 
                  TCGA-K4-A3WV 
"DEL PEAK 23(14Q12) WILD-TYPE" 
[1] "hr=" "1.5"
D51V2, continuous
D51V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 23(14Q12) CNV          7   32
  DEL PEAK 23(14Q12) WILD-TYPE   27   68
        clus
vv       DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE
  FEMALE                      7                           27
  MALE                       32                           68
D51V4, continuous
D51V5, continuous
                              vv
clus                           M0 M1 MX
  DEL PEAK 23(14Q12) CNV       23  1 14
  DEL PEAK 23(14Q12) WILD-TYPE 54  4 37
D51V6, multiclass
    clus
vv   DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE
  M0                     23                           54
  M1                      1                            4
  MX                     14                           37
                              vv
clus                           N0 N1 N2 N3 NX
  DEL PEAK 23(14Q12) CNV       16  5 13  1  3
  DEL PEAK 23(14Q12) WILD-TYPE 59  9 14  4  7
D51V7, multiclass
D51V8, continuous
D51V9, continuous
                              vv
clus                           STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 23(14Q12) CNV             0        9         8       19
  DEL PEAK 23(14Q12) WILD-TYPE       1       27        36       29
D51V10, multiclass
           clus
vv          DEL PEAK 23(14Q12) CNV DEL PEAK 23(14Q12) WILD-TYPE
  STAGE I                        0                            1
  STAGE II                       9                           27
  STAGE III                      8                           36
  STAGE IV                      19                           29

Clustering(52) Variable = Del Peak 24(14q32.31)
D52V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 24(14Q32.31) CNV       29  7
  DEL PEAK 24(14Q32.31) WILD-TYPE 64 27
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                             36                              91 
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                              7                              27 
$`DEL PEAK 24(14Q32.31) CNV`
TCGA-BT-A20J TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LD TCGA-CF-A1HR 
       19.00        14.89         5.06         8.35         3.65         0.46 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1AC TCGA-DK-A2I1 
        4.90         7.20         2.53         2.14       118.88        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IQ TCGA-FD-A3B6 TCGA-FD-A3SN TCGA-FD-A3SP 
       75.32         2.20        10.49         6.87         6.81         4.54 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A3IE 
        7.89         6.84        15.16         4.08        49.91        20.12 
TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GU-A42Q TCGA-GV-A3JX TCGA-GV-A3JZ 
        4.50         1.02         1.08         7.56         6.15         5.69 
TCGA-GV-A3QF TCGA-GV-A3QI TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WU 
        7.63         4.11         6.38         5.33         6.71         3.42 

$`DEL PEAK 24(14Q32.31) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U 
       26.10        12.16        17.85        19.46         5.06         8.61 
TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 
        8.25         5.88         4.64         8.98         1.94         2.01 
TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL 
        0.43         0.69        12.92         5.46         5.19         8.09 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AE 
       31.40         8.98         7.04         8.91       100.47         7.17 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL 
        5.85         6.64         1.81         7.76       123.85         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3IV 
        7.82         8.22        37.84         5.52        11.51         9.67 
TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC 
        8.28        10.55       131.15        41.03        17.98        36.43 
TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.81         8.32         8.94         4.01        11.05 
TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM 
        8.94         7.96        32.02        24.30        10.98         6.12 
TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FJ-A3ZE TCGA-FT-A3EE 
        5.49        46.78        19.79         1.94         3.48         3.22 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB 
       26.50         5.65        26.93        32.78        17.26         7.04 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GC-A3WC 
        0.82         2.86         2.24         1.32         1.38         2.50 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42R 
        7.69         2.10         3.12         5.82         6.38         3.22 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3QH TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WS 
        4.37         6.41         7.79         6.64         1.51         8.71 
TCGA-K4-A3WV 
        4.64 

      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                           0.46                            0.10 
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                         118.88                          131.15 
      DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE 
                          6.545                           7.690 
[1] "0.5 - 118.9 (6.5)" "0.1 - 131.2 (7.7)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-K4-A3WV 
"DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-K4-A3WV 
"DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
"DEL PEAK 24(14Q32.31) WILD-TYPE" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
      "DEL PEAK 24(14Q32.31) CNV" "DEL PEAK 24(14Q32.31) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "DEL PEAK 24(14Q32.31) CNV"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
"DEL PEAK 24(14Q32.31) WILD-TYPE"       "DEL PEAK 24(14Q32.31) CNV" 
                     TCGA-K4-A3WV 
"DEL PEAK 24(14Q32.31) WILD-TYPE" 
[1] "hr=" "1.2"
D52V2, continuous
D52V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 24(14Q32.31) CNV          5   33
  DEL PEAK 24(14Q32.31) WILD-TYPE   29   67
        clus
vv       DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE
  FEMALE                         5                              29
  MALE                          33                              67
D52V4, continuous
D52V5, continuous
                                 vv
clus                              M0 M1 MX
  DEL PEAK 24(14Q32.31) CNV       19  1 18
  DEL PEAK 24(14Q32.31) WILD-TYPE 58  4 33
D52V6, multiclass
    clus
vv   DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE
  M0                        19                              58
  M1                         1                               4
  MX                        18                              33
                                 vv
clus                              N0 N1 N2 N3 NX
  DEL PEAK 24(14Q32.31) CNV       21  4  9  1  3
  DEL PEAK 24(14Q32.31) WILD-TYPE 54 10 18  4  7
D52V7, multiclass
D52V8, continuous
D52V9, continuous
                                 vv
clus                              STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 24(14Q32.31) CNV             0       10        10       15
  DEL PEAK 24(14Q32.31) WILD-TYPE       1       26        34       33
D52V10, multiclass
           clus
vv          DEL PEAK 24(14Q32.31) CNV DEL PEAK 24(14Q32.31) WILD-TYPE
  STAGE I                           0                               1
  STAGE II                         10                              26
  STAGE III                        10                              34
  STAGE IV                         15                              33

Clustering(53) Variable = Del Peak 25(15q13.1)
D53V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 25(15Q13.1) CNV       36 12
  DEL PEAK 25(15Q13.1) WILD-TYPE 57 22
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                            48                             79 
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                            12                             22 
$`DEL PEAK 25(15Q13.1) CNV`
TCGA-BL-A0C8 TCGA-BT-A0S7 TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20W TCGA-BT-A20X 
       12.79         6.58        19.00        26.10         8.35         8.25 
TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CU-A0YR TCGA-CU-A3QU TCGA-DK-A1A6 
        3.65         8.98         1.94         7.20         5.19        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IM 
        8.98       100.47         1.81         7.76       123.85         7.82 
TCGA-DK-A3IN TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3N5 TCGA-FD-A3NA 
        8.22        17.98        36.43         8.81         8.94        32.02 
TCGA-FD-A3SJ TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A43N TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       24.30         6.81         4.54         7.89        15.16         4.08 
TCGA-G2-A2EF TCGA-G2-A2EL TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3OO TCGA-GC-A3RB 
       49.91        26.93        20.12         0.82         1.32         4.50 
TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GU-A42P TCGA-GV-A3JW TCGA-GV-A3JX 
        1.02         1.08         2.10         6.38         6.41         6.15 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS 
        7.63         7.79         6.38         5.33         6.71         8.71 

$`DEL PEAK 25(15Q13.1) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20P 
        7.33         2.66         6.74        11.93        12.16        17.85 
TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A2LA 
       19.46         5.06        14.89         8.61         5.06         5.88 
TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A0YN 
        4.64         2.01         0.46         0.43         0.69        12.92 
TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1AA 
        4.90         5.46         8.09         2.53         2.14         7.04 
TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 
        8.91       118.88         7.17         5.85         6.64        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IT 
       75.32         2.20         3.98        10.49        37.84         5.52 
TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 
       11.51         9.67         8.28        10.55       131.15        41.03 
TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 
        0.10         8.32         8.94         6.87         4.01        11.05 
TCGA-FD-A3N6 TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A3SR 
        7.96        10.98         6.12         5.49        46.78        19.79 
TCGA-FD-A3SS TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK 
        1.94         6.84         3.48         3.22        26.50         5.65 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3RC 
       32.78        17.26         7.04         2.86         2.24         1.38 
TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R 
        2.50         7.69         3.12         5.82         7.56         3.22 
TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QI TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WU 
        4.37         5.69         4.11         6.64         1.51         3.42 
TCGA-K4-A3WV 
        4.64 

      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                          0.82                           0.10 
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                        123.85                         131.15 
      DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE 
                         7.805                          6.640 
[1] "0.8 - 123.8 (7.8)" "0.1 - 131.2 (6.6)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 25(15Q13.1) WILD-TYPE" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
      "DEL PEAK 25(15Q13.1) CNV"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 25(15Q13.1) WILD-TYPE"       "DEL PEAK 25(15Q13.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 25(15Q13.1) CNV" "DEL PEAK 25(15Q13.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 25(15Q13.1) WILD-TYPE" 
[1] "hr=" "1.5"
D53V2, continuous
D53V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 25(15Q13.1) CNV         10   40
  DEL PEAK 25(15Q13.1) WILD-TYPE   24   60
        clus
vv       DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE
  FEMALE                       10                             24
  MALE                         40                             60
D53V4, continuous
D53V5, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 25(15Q13.1) CNV       23  2 24
  DEL PEAK 25(15Q13.1) WILD-TYPE 54  3 27
D53V6, multiclass
    clus
vv   DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE
  M0                       23                             54
  M1                        2                              3
  MX                       24                             27
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 25(15Q13.1) CNV       23  7 11  2  6
  DEL PEAK 25(15Q13.1) WILD-TYPE 52  7 16  3  4
D53V7, multiclass
D53V8, continuous
D53V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 25(15Q13.1) CNV             1       14        13       21
  DEL PEAK 25(15Q13.1) WILD-TYPE       0       22        31       27
D53V10, multiclass
           clus
vv          DEL PEAK 25(15Q13.1) CNV DEL PEAK 25(15Q13.1) WILD-TYPE
  STAGE I                          1                              0
  STAGE II                        14                             22
  STAGE III                       13                             31
  STAGE IV                        21                             27

Clustering(54) Variable = Del Peak 26(16p13.3)
D54V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 26(16P13.3) CNV       34 14
  DEL PEAK 26(16P13.3) WILD-TYPE 59 20
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                            48                             79 
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                            14                             20 
$`DEL PEAK 26(16P13.3) CNV`
TCGA-BL-A13J TCGA-BT-A0S7 TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20W TCGA-BT-A2LA 
        2.66         6.58        26.10         5.06         8.35         5.88 
TCGA-BT-A3PH TCGA-C4-A0F6 TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A3KJ TCGA-CU-A3QU 
        4.64         2.01         0.43        12.92         5.46         5.19 
TCGA-DK-A1A3 TCGA-DK-A1A7 TCGA-DK-A2HX TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK 
        2.53         8.98         1.81       123.85        75.32         2.20 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3WX TCGA-DK-A3X2 
        7.82         8.22         5.52         9.67        10.55        17.98 
TCGA-FD-A3B3 TCGA-FD-A3B6 TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FD-A43N TCGA-FD-A43U 
        8.81         6.87         4.54        19.79         7.89         6.84 
TCGA-FJ-A3Z7 TCGA-G2-A2EF TCGA-G2-A2EL TCGA-G2-A3IE TCGA-GC-A3RB TCGA-GC-A3RC 
       15.16        49.91        26.93        20.12         4.50         1.38 
TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42R 
        1.02         1.08         7.69         2.10         6.38         3.22 
TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QH TCGA-H4-A2HQ TCGA-K4-A3WS 
        6.41         6.15         5.69         7.79         6.71         8.71 

$`DEL PEAK 26(16P13.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20O 
       12.79         7.33         6.74        11.93        19.00        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20X 
       17.85        19.46        14.89         8.61         5.06         8.25 
TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-CF-A1HR TCGA-CF-A27C TCGA-CU-A0YO 
        3.65         8.98         1.94         0.46         0.69         4.90 
TCGA-CU-A0YR TCGA-CU-A3YL TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB 
        7.20         8.09         2.14        31.40         7.04         8.91 
TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 
      118.88       100.47         7.17         5.85         6.64        10.59 
TCGA-DK-A2I2 TCGA-DK-A3IL TCGA-DK-A3IQ TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3WW 
        7.76         3.98        10.49        37.84        11.51         8.28 
TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B4 TCGA-FD-A3B5 
      131.15        41.03        36.43         0.10         8.32         8.94 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ 
        4.01        11.05         8.94         7.96        32.02        24.30 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SQ TCGA-FD-A3SS 
       10.98         6.12         6.81         5.49        46.78         1.94 
TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO 
        3.48         4.08         3.22        26.50         5.65        32.78 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO 
       17.26         7.04         0.82         2.86         2.24         1.32 
TCGA-GC-A3WC TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GV-A3JV TCGA-GV-A3QF 
        2.50         3.12         5.82         7.56         4.37         7.63 
TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU 
        4.11         6.64         6.38         5.33         1.51         3.42 
TCGA-K4-A3WV 
        4.64 

      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                        123.85                         131.15 
      DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE 
                         6.645                          7.200 
[1] "0.4 - 123.8 (6.6)" "0.1 - 131.2 (7.2)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 26(16P13.3) CNV"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 26(16P13.3) WILD-TYPE" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 26(16P13.3) WILD-TYPE"       "DEL PEAK 26(16P13.3) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 26(16P13.3) CNV" "DEL PEAK 26(16P13.3) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 26(16P13.3) WILD-TYPE" 
[1] "hr=" "1.3"
D54V2, continuous
D54V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 26(16P13.3) CNV         11   38
  DEL PEAK 26(16P13.3) WILD-TYPE   23   62
        clus
vv       DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE
  FEMALE                       11                             23
  MALE                         38                             62
D54V4, continuous
D54V5, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 26(16P13.3) CNV       27  1 21
  DEL PEAK 26(16P13.3) WILD-TYPE 50  4 30
D54V6, multiclass
    clus
vv   DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE
  M0                       27                             50
  M1                        1                              4
  MX                       21                             30
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 26(16P13.3) CNV       24  5 13  1  5
  DEL PEAK 26(16P13.3) WILD-TYPE 51  9 14  4  5
D54V7, multiclass
D54V8, continuous
D54V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 26(16P13.3) CNV             0       10        18       19
  DEL PEAK 26(16P13.3) WILD-TYPE       1       26        26       29
D54V10, multiclass
           clus
vv          DEL PEAK 26(16P13.3) CNV DEL PEAK 26(16P13.3) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                        10                             26
  STAGE III                       18                             26
  STAGE IV                        19                             29

Clustering(55) Variable = Del Peak 27(16q23.1)
D55V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 27(16Q23.1) CNV       29  8
  DEL PEAK 27(16Q23.1) WILD-TYPE 64 26
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                            37                             90 
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                             8                             26 
$`DEL PEAK 27(16Q23.1) CNV`
TCGA-BL-A0C8 TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A3 TCGA-DK-A1AC TCGA-DK-A2HX 
       12.79        12.92         5.19         2.53       118.88         1.81 
TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IN TCGA-DK-A3IV 
       10.59         7.76       123.85        75.32         8.22         9.67 
TCGA-DK-A3WW TCGA-DK-A3X2 TCGA-FD-A3B5 TCGA-FD-A3N5 TCGA-FD-A3SO TCGA-FD-A3SS 
        8.28        17.98         8.94         8.94         5.49         1.94 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A3IE 
        7.89         6.84        15.16        49.91        26.50        20.12 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GD-A3OP TCGA-GU-A42P TCGA-GU-A42Q TCGA-GV-A3JV 
        1.38         1.02         2.10         6.38         7.56         4.37 
TCGA-GV-A3JX TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-H4-A2HQ 
        6.15         5.69         7.63         7.79         4.11         6.71 
TCGA-K4-A3WV 
        4.64 

$`DEL PEAK 27(16Q23.1) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
        7.33         2.66         6.74         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20T 
       26.10        12.16        17.85        19.46         5.06        14.89 
TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD 
        8.61         5.06         8.35         8.25         5.88         3.65 
TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS 
        4.64         8.98         1.94         2.01         0.46         0.43 
TCGA-CF-A27C TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A5 
        0.69         4.90         7.20         5.46         8.09         2.14 
TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AE 
       31.40         8.98         7.04         8.91       100.47         7.17 
TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IQ 
        5.85         6.64         2.20         3.98         7.82        10.49 
TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IU TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 
       37.84         5.52        11.51        10.55       131.15        41.03 
TCGA-E5-A2PC TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3B7 
       36.43         0.10         8.81         8.32         6.87         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM 
       11.05         7.96        32.02        24.30        10.98         6.12 
TCGA-FD-A3SN TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR TCGA-FJ-A3ZE TCGA-FJ-A3ZF 
        6.81         4.54        46.78        19.79         3.48         4.08 
TCGA-FT-A3EE TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IB 
        3.22         5.65        26.93        32.78        17.26         7.04 
TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3WC 
        0.82         2.86         2.24         1.32         4.50         2.50 
TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42R TCGA-GV-A3JW 
        1.08         7.69         3.12         5.82         3.22         6.41 
TCGA-GV-A3QK TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        6.64         6.38         5.33         1.51         8.71         3.42 

      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                          1.02                           0.10 
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                        123.85                         131.15 
      DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE 
                         7.760                          6.775 
[1] "1.0 - 123.8 (7.8)" "0.1 - 131.2 (6.8)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
      "DEL PEAK 27(16Q23.1) CNV"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK 27(16Q23.1) CNV" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 27(16Q23.1) WILD-TYPE"       "DEL PEAK 27(16Q23.1) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 27(16Q23.1) WILD-TYPE" "DEL PEAK 27(16Q23.1) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK 27(16Q23.1) CNV" 
[1] "hr=" "1.5"
D55V2, continuous
D55V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 27(16Q23.1) CNV          8   30
  DEL PEAK 27(16Q23.1) WILD-TYPE   26   70
        clus
vv       DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE
  FEMALE                        8                             26
  MALE                         30                             70
D55V4, continuous
D55V5, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 27(16Q23.1) CNV       20  1 17
  DEL PEAK 27(16Q23.1) WILD-TYPE 57  4 34
D55V6, multiclass
    clus
vv   DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE
  M0                       20                             57
  M1                        1                              4
  MX                       17                             34
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 27(16Q23.1) CNV       16  6  8  3  5
  DEL PEAK 27(16Q23.1) WILD-TYPE 59  8 19  2  5
D55V7, multiclass
D55V8, continuous
D55V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 27(16Q23.1) CNV             1        9        10       17
  DEL PEAK 27(16Q23.1) WILD-TYPE       0       27        34       31
D55V10, multiclass
           clus
vv          DEL PEAK 27(16Q23.1) CNV DEL PEAK 27(16Q23.1) WILD-TYPE
  STAGE I                          1                              0
  STAGE II                         9                             27
  STAGE III                       10                             34
  STAGE IV                        17                             31

Clustering(56) Variable = Del Peak 28(17p12)
D56V1, survival
                              sevent
clus2                           0  1
  DEL PEAK 28(17P12) CNV       49 19
  DEL PEAK 28(17P12) WILD-TYPE 44 15
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                          68                           59 
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                          19                           15 
$`DEL PEAK 28(17P12) CNV`
TCGA-BL-A0C8 TCGA-BL-A13J TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20P TCGA-BT-A20Q 
       12.79         2.66        19.00        26.10        17.85        19.46 
TCGA-BT-A20T TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 
       14.89         8.25         5.88         4.64         8.98         1.94 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C TCGA-CU-A3KJ TCGA-DK-A1A5 TCGA-DK-A1A6 
        0.46         0.43         0.69         5.46         2.14        31.40 
TCGA-DK-A1A7 TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I1 
        8.98         8.91       118.88       100.47         1.81        10.59 
TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IS 
       75.32         2.20         3.98         8.22        10.49        37.84 
TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B4 
        5.52         9.67        41.03        17.98        36.43         8.32 
TCGA-FD-A3B5 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SQ 
        8.94        32.02        24.30         6.81         5.49        46.78 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-G2-A2EF 
        1.94         7.89         6.84        15.16         3.48        49.91 
TCGA-G2-A2EJ TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3BM 
       26.50        26.93        32.78        20.12         0.82         2.86 
TCGA-GC-A3RB TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42P 
        4.50         1.02         1.08         7.69         2.10         6.38 
TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A40E 
        7.56         3.22         5.69         7.63         7.79         6.38 
TCGA-GV-A40G TCGA-H4-A2HQ 
        5.33         6.71 

$`DEL PEAK 28(17P12) WILD-TYPE`
TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20O TCGA-BT-A20R 
        7.33         6.74         6.58        11.93        12.16         5.06 
TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LD TCGA-C4-A0F6 TCGA-CU-A0YN 
        8.61         5.06         8.35         3.65         2.01        12.92 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1AA 
        4.90         7.20         5.19         8.09         2.53         7.04 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IM 
        7.17         5.85         6.64         7.76       123.85         7.82 
TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 
       11.51         8.28        10.55       131.15         0.10         8.81 
TCGA-FD-A3B6 TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3SL 
        6.87         4.01        11.05         8.94         7.96        10.98 
TCGA-FD-A3SM TCGA-FD-A3SP TCGA-FD-A3SR TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EK 
        6.12         4.54        19.79         4.08         3.22         5.65 
TCGA-G2-A2ES TCGA-G2-A3IB TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RC TCGA-GC-A3WC 
       17.26         7.04         2.24         1.32         1.38         2.50 
TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A3QI 
        3.12         5.82         4.37         6.41         6.15         4.11 
TCGA-GV-A3QK TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU TCGA-K4-A3WV 
        6.64         1.51         8.71         3.42         4.64 

      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                        0.43                         0.10 
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                      118.88                       131.15 
      DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE 
                        7.84                         6.64 
[1] "0.4 - 118.9 (7.8)" "0.1 - 131.2 (6.6)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-K4-A3WV 
"DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-K4-A3WV 
"DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "DEL PEAK 28(17P12) CNV" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
      "DEL PEAK 28(17P12) CNV"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 28(17P12) WILD-TYPE"       "DEL PEAK 28(17P12) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
"DEL PEAK 28(17P12) WILD-TYPE" "DEL PEAK 28(17P12) WILD-TYPE" 
                  TCGA-K4-A3WV 
"DEL PEAK 28(17P12) WILD-TYPE" 
[1] "hr=" "1.9"
D56V2, continuous
D56V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 28(17P12) CNV         16   55
  DEL PEAK 28(17P12) WILD-TYPE   18   45
        clus
vv       DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE
  FEMALE                     16                           18
  MALE                       55                           45
D56V4, continuous
D56V5, continuous
                              vv
clus                           M0 M1 MX
  DEL PEAK 28(17P12) CNV       41  3 26
  DEL PEAK 28(17P12) WILD-TYPE 36  2 25
D56V6, multiclass
    clus
vv   DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE
  M0                     41                           36
  M1                      3                            2
  MX                     26                           25
                              vv
clus                           N0 N1 N2 N3 NX
  DEL PEAK 28(17P12) CNV       32  9 18  3  6
  DEL PEAK 28(17P12) WILD-TYPE 43  5  9  2  4
D56V7, multiclass
D56V8, continuous
D56V9, continuous
                              vv
clus                           STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 28(17P12) CNV             1       19        15       32
  DEL PEAK 28(17P12) WILD-TYPE       0       17        29       16
D56V10, multiclass
           clus
vv          DEL PEAK 28(17P12) CNV DEL PEAK 28(17P12) WILD-TYPE
  STAGE I                        1                            0
  STAGE II                      19                           17
  STAGE III                     15                           29
  STAGE IV                      32                           16

Clustering(57) Variable = Del Peak 29(18q23)
D57V1, survival
                              sevent
clus2                           0  1
  DEL PEAK 29(18Q23) CNV       41 12
  DEL PEAK 29(18Q23) WILD-TYPE 52 22
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                          53                           74 
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                          12                           22 
$`DEL PEAK 29(18Q23) CNV`
TCGA-BT-A0YX TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20R TCGA-BT-A20W TCGA-BT-A2LA 
       11.93        19.00        26.10         5.06         8.35         5.88 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YN TCGA-CU-A0YR TCGA-DK-A1A5 TCGA-DK-A1A7 
        0.46         0.43        12.92         7.20         2.14         8.98 
TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A2HX 
        8.91       118.88       100.47         7.17         5.85         1.81 
TCGA-DK-A2I1 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
       10.59        75.32         2.20         3.98         7.82         8.22 
TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3X1 TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B7 
       37.84         5.52        41.03        36.43         8.32         4.01 
TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ 
       32.02        24.30         6.81         5.49         4.54        46.78 
TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A3IE TCGA-GC-A3BM 
        1.94         7.89         4.08        49.91        20.12         2.86 
TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3YS TCGA-GD-A3OP TCGA-GD-A3OS TCGA-GU-A42P 
        1.38         1.02         1.08         2.10         5.82         6.38 
TCGA-GV-A3JW TCGA-GV-A3JX TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS 
        6.41         6.15         5.33         6.71         8.71 

$`DEL PEAK 29(18Q23) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A20O 
       12.79         7.33         2.66         6.74         6.58        12.16 
TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20V TCGA-BT-A20X 
       17.85        19.46        14.89         8.61         5.06         8.25 
TCGA-BT-A2LD TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CF-A27C 
        3.65         4.64         8.98         1.94         2.01         0.69 
TCGA-CU-A0YO TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 
        4.90         5.46         5.19         8.09         2.53        31.40 
TCGA-DK-A1AA TCGA-DK-A1AG TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IQ TCGA-DK-A3IU 
        7.04         6.64         7.76       123.85        10.49        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X2 TCGA-E7-A3Y1 
        9.67         8.28        10.55       131.15        17.98         0.10 
TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 
        8.81         8.94         6.87        11.05         8.94         7.96 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SR TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE 
       10.98         6.12        19.79         6.84        15.16         3.48 
TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO TCGA-G2-A2ES 
        3.22        26.50         5.65        26.93        32.78        17.26 
TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3WC 
        7.04         0.82         2.24         1.32         4.50         2.50 
TCGA-GD-A2C5 TCGA-GD-A3OQ TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV TCGA-GV-A3JZ 
        7.69         3.12         7.56         3.22         4.37         5.69 
TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO 
        7.63         7.79         4.11         6.64         6.38         1.51 
TCGA-K4-A3WU TCGA-K4-A3WV 
        3.42         4.64 

      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                        0.43                         0.10 
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                      118.88                       131.15 
      DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE 
                        6.81                         7.04 
[1] "0.4 - 118.9 (6.8)" "0.1 - 131.2 (7.0)"
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-K4-A3WV 
"DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-K4-A3WV 
"DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BL-A0C8                   TCGA-BL-A13I 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BL-A13J                   TCGA-BL-A3JM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A0S7                   TCGA-BT-A0YX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20J                   TCGA-BT-A20N 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20O                   TCGA-BT-A20P 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20Q                   TCGA-BT-A20R 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20T                   TCGA-BT-A20U 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-BT-A20V                   TCGA-BT-A20W 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A20X                   TCGA-BT-A2LA 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-BT-A2LD                   TCGA-BT-A3PH 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0EZ                   TCGA-C4-A0F0 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-C4-A0F6                   TCGA-CF-A1HR 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-CF-A1HS                   TCGA-CF-A27C 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YN                   TCGA-CU-A0YO 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A0YR                   TCGA-CU-A3KJ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-CU-A3QU                   TCGA-CU-A3YL 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A1A3                   TCGA-DK-A1A5 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1A6                   TCGA-DK-A1A7 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AA                   TCGA-DK-A1AB 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AC                   TCGA-DK-A1AD 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AE                   TCGA-DK-A1AF 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A1AG                   TCGA-DK-A2HX 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A2I1                   TCGA-DK-A2I2 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A2I4                   TCGA-DK-A2I6 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IK                   TCGA-DK-A3IL 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IM                   TCGA-DK-A3IN 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IQ                   TCGA-DK-A3IS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-DK-A3IT                   TCGA-DK-A3IU 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3IV                   TCGA-DK-A3WW 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3WX                   TCGA-DK-A3WY 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-DK-A3X1                   TCGA-DK-A3X2 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-E5-A2PC                   TCGA-E7-A3Y1 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B3                   TCGA-FD-A3B4 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3B5                   TCGA-FD-A3B6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3B7                   TCGA-FD-A3B8 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3N5                   TCGA-FD-A3N6 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3NA                   TCGA-FD-A3SJ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SL                   TCGA-FD-A3SM 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FD-A3SN                   TCGA-FD-A3SO 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SP                   TCGA-FD-A3SQ 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A3SR                   TCGA-FD-A3SS 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-FD-A43N                   TCGA-FD-A43U 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FJ-A3Z7                   TCGA-FJ-A3ZE 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-FJ-A3ZF                   TCGA-FT-A3EE 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EF                   TCGA-G2-A2EJ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EK                   TCGA-G2-A2EL 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A2EO                   TCGA-G2-A2ES 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-G2-A3IB                   TCGA-G2-A3IE 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-G2-A3VY                   TCGA-GC-A3BM 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GC-A3I6                   TCGA-GC-A3OO 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3RB                   TCGA-GC-A3RC 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GC-A3RD                   TCGA-GC-A3WC 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GC-A3YS                   TCGA-GD-A2C5 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GD-A3OP                   TCGA-GD-A3OQ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GD-A3OS                   TCGA-GU-A42P 
      "DEL PEAK 29(18Q23) CNV"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GU-A42Q                   TCGA-GU-A42R 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3JV                   TCGA-GV-A3JW 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-GV-A3JX                   TCGA-GV-A3JZ 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QF                   TCGA-GV-A3QH 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A3QI                   TCGA-GV-A3QK 
"DEL PEAK 29(18Q23) WILD-TYPE" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-GV-A40E                   TCGA-GV-A40G 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-H4-A2HO                   TCGA-H4-A2HQ 
"DEL PEAK 29(18Q23) WILD-TYPE"       "DEL PEAK 29(18Q23) CNV" 
                  TCGA-K4-A3WS                   TCGA-K4-A3WU 
      "DEL PEAK 29(18Q23) CNV" "DEL PEAK 29(18Q23) WILD-TYPE" 
                  TCGA-K4-A3WV 
"DEL PEAK 29(18Q23) WILD-TYPE" 
[1] "hr=" "1.8"
D57V2, continuous
D57V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 29(18Q23) CNV         16   42
  DEL PEAK 29(18Q23) WILD-TYPE   18   58
        clus
vv       DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE
  FEMALE                     16                           18
  MALE                       42                           58
D57V4, continuous
D57V5, continuous
                              vv
clus                           M0 M1 MX
  DEL PEAK 29(18Q23) CNV       35  1 22
  DEL PEAK 29(18Q23) WILD-TYPE 42  4 29
D57V6, multiclass
    clus
vv   DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE
  M0                     35                           42
  M1                      1                            4
  MX                     22                           29
                              vv
clus                           N0 N1 N2 N3 NX
  DEL PEAK 29(18Q23) CNV       34  6 11  1  5
  DEL PEAK 29(18Q23) WILD-TYPE 41  8 16  4  5
D57V7, multiclass
D57V8, continuous
D57V9, continuous
                              vv
clus                           STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 29(18Q23) CNV             0       17        18       20
  DEL PEAK 29(18Q23) WILD-TYPE       1       19        26       28
D57V10, multiclass
           clus
vv          DEL PEAK 29(18Q23) CNV DEL PEAK 29(18Q23) WILD-TYPE
  STAGE I                        0                            1
  STAGE II                      17                           19
  STAGE III                     18                           26
  STAGE IV                      20                           28

Clustering(58) Variable = Del Peak 30(19p13.3)
D58V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 30(19P13.3) CNV       39 14
  DEL PEAK 30(19P13.3) WILD-TYPE 54 20
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                            53                             74 
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                            14                             20 
$`DEL PEAK 30(19P13.3) CNV`
TCGA-BT-A20J TCGA-BT-A20R TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20W TCGA-BT-A2LD 
       19.00         5.06        14.89         5.06         8.35         3.65 
TCGA-BT-A3PH TCGA-C4-A0EZ TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CF-A1HS TCGA-DK-A1A5 
        4.64         8.98         2.01         0.46         0.43         2.14 
TCGA-DK-A1A7 TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A2HX TCGA-DK-A2I6 TCGA-DK-A3IL 
        8.98         8.91       100.47         1.81        75.32         3.98 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3IV TCGA-DK-A3X1 TCGA-DK-A3X2 
        8.22        10.49         5.52         9.67        41.03        17.98 
TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3SJ TCGA-FD-A3SL TCGA-FD-A3SM 
       36.43         8.32         6.87        24.30        10.98         6.12 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SS TCGA-FD-A43N TCGA-FJ-A3ZE TCGA-FJ-A3ZF 
        6.81         5.49         1.94         7.89         3.48         4.08 
TCGA-G2-A2EF TCGA-G2-A2ES TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3RB 
       49.91        17.26         7.04        20.12         0.82         4.50 
TCGA-GC-A3YS TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JW TCGA-GV-A3JX 
        1.08         6.38         7.56         3.22         6.41         6.15 
TCGA-GV-A3JZ TCGA-GV-A40G TCGA-H4-A2HO TCGA-H4-A2HQ TCGA-K4-A3WS 
        5.69         5.33         1.51         6.71         8.71 

$`DEL PEAK 30(19P13.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20U TCGA-BT-A20X 
       26.10        12.16        17.85        19.46         8.61         8.25 
TCGA-BT-A2LA TCGA-C4-A0F0 TCGA-CF-A27C TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR 
        5.88         1.94         0.69        12.92         4.90         7.20 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1AA 
        5.46         5.19         8.09         2.53        31.40         7.04 
TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I2 
      118.88         7.17         5.85         6.64        10.59         7.76 
TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IM TCGA-DK-A3IS TCGA-DK-A3IU TCGA-DK-A3WW 
      123.85         2.20         7.82        37.84        11.51         8.28 
TCGA-DK-A3WX TCGA-DK-A3WY TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B7 
       10.55       131.15         0.10         8.81         8.94         4.01 
TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SP TCGA-FD-A3SQ 
       11.05         8.94         7.96        32.02         4.54        46.78 
TCGA-FD-A3SR TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK 
       19.79         6.84        15.16         3.22        26.50         5.65 
TCGA-G2-A2EL TCGA-G2-A2EO TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RC 
       26.93        32.78         2.86         2.24         1.32         1.38 
TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS 
        1.02         2.50         7.69         2.10         3.12         5.82 
TCGA-GV-A3JV TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK TCGA-GV-A40E 
        4.37         7.63         7.79         4.11         6.64         6.38 
TCGA-K4-A3WU TCGA-K4-A3WV 
        3.42         4.64 

      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                        100.47                         131.15 
      DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE 
                         6.710                          7.265 
[1] "0.4 - 100.5 (6.7)" "0.1 - 131.2 (7.3)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
"DEL PEAK 30(19P13.3) WILD-TYPE" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 30(19P13.3) WILD-TYPE"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
      "DEL PEAK 30(19P13.3) CNV"       "DEL PEAK 30(19P13.3) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
      "DEL PEAK 30(19P13.3) CNV" "DEL PEAK 30(19P13.3) WILD-TYPE" 
                    TCGA-K4-A3WV 
"DEL PEAK 30(19P13.3) WILD-TYPE" 
[1] "hr=" "1.1"
D58V2, continuous
D58V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 30(19P13.3) CNV         14   40
  DEL PEAK 30(19P13.3) WILD-TYPE   20   60
        clus
vv       DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE
  FEMALE                       14                             20
  MALE                         40                             60
D58V4, continuous
D58V5, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 30(19P13.3) CNV       28  5 20
  DEL PEAK 30(19P13.3) WILD-TYPE 49  0 31
D58V6, multiclass
    clus
vv   DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE
  M0                       28                             49
  M1                        5                              0
  MX                       20                             31
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 30(19P13.3) CNV       24  9 10  3  5
  DEL PEAK 30(19P13.3) WILD-TYPE 51  5 17  2  5
D58V7, multiclass
D58V8, continuous
D58V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 30(19P13.3) CNV             0       14        13       25
  DEL PEAK 30(19P13.3) WILD-TYPE       1       22        31       23
D58V10, multiclass
           clus
vv          DEL PEAK 30(19P13.3) CNV DEL PEAK 30(19P13.3) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                        14                             22
  STAGE III                       13                             31
  STAGE IV                        25                             23

Clustering(59) Variable = Del Peak 31(22q13.32)
D59V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 31(22Q13.32) CNV       38 15
  DEL PEAK 31(22Q13.32) WILD-TYPE 55 19
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                             53                              74 
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                             15                              19 
$`DEL PEAK 31(22Q13.32) CNV`
TCGA-BL-A13J TCGA-BT-A20J TCGA-BT-A20R TCGA-BT-A20V TCGA-BT-A20W TCGA-C4-A0EZ 
        2.66        19.00         5.06         5.06         8.35         8.98 
TCGA-C4-A0F0 TCGA-C4-A0F6 TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A7 TCGA-DK-A1AC 
        1.94         2.01        12.92         5.19         8.98       118.88 
TCGA-DK-A2HX TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
        1.81         7.76       123.85         3.98         7.82         8.22 
TCGA-DK-A3IQ TCGA-DK-A3IT TCGA-DK-A3X2 TCGA-E5-A2PC TCGA-FD-A3B3 TCGA-FD-A3B4 
       10.49         5.52        17.98        36.43         8.81         8.32 
TCGA-FD-A3B5 TCGA-FD-A3B6 TCGA-FD-A3N5 TCGA-FD-A3NA TCGA-FD-A3SJ TCGA-FD-A3SL 
        8.94         6.87         8.94        32.02        24.30        10.98 
TCGA-FD-A3SN TCGA-FD-A3SO TCGA-FD-A3SR TCGA-FD-A3SS TCGA-FD-A43N TCGA-FD-A43U 
        6.81         5.49        19.79         1.94         7.89         6.84 
TCGA-FJ-A3Z7 TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A3IB TCGA-G2-A3IE TCGA-G2-A3VY 
       15.16         4.08        49.91         7.04        20.12         0.82 
TCGA-GC-A3RC TCGA-GC-A3YS TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GU-A42Q TCGA-GV-A3JX 
        1.38         1.08         7.69         2.10         7.56         6.15 
TCGA-GV-A40E TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WS TCGA-K4-A3WU 
        6.38         5.33         6.71         8.71         3.42 

$`DEL PEAK 31(22Q13.32) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20N 
       12.79         7.33         6.74         6.58        11.93        26.10 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20T TCGA-BT-A20U TCGA-BT-A20X 
       12.16        17.85        19.46        14.89         8.61         8.25 
TCGA-BT-A2LA TCGA-BT-A2LD TCGA-BT-A3PH TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CF-A27C 
        5.88         3.65         4.64         0.46         0.43         0.69 
TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 
        4.90         7.20         5.46         8.09         2.53         2.14 
TCGA-DK-A1A6 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF 
       31.40         7.04         8.91       100.47         7.17         5.85 
TCGA-DK-A1AG TCGA-DK-A2I1 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IS TCGA-DK-A3IU 
        6.64        10.59        75.32         2.20        37.84        11.51 
TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-E7-A3Y1 
        9.67         8.28        10.55       131.15        41.03         0.10 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N6 TCGA-FD-A3SM TCGA-FD-A3SP TCGA-FD-A3SQ 
        4.01        11.05         7.96         6.12         4.54        46.78 
TCGA-FJ-A3ZE TCGA-FT-A3EE TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EL TCGA-G2-A2EO 
        3.48         3.22        26.50         5.65        26.93        32.78 
TCGA-G2-A2ES TCGA-GC-A3BM TCGA-GC-A3I6 TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RD 
       17.26         2.86         2.24         1.32         4.50         1.02 
TCGA-GC-A3WC TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42P TCGA-GU-A42R TCGA-GV-A3JV 
        2.50         3.12         5.82         6.38         3.22         4.37 
TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A3QK 
        6.41         5.69         7.63         7.79         4.11         6.64 
TCGA-H4-A2HO TCGA-K4-A3WV 
        1.51         4.64 

      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                           0.82                            0.10 
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                         123.85                          131.15 
      DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE 
                           7.69                            6.64 
[1] "0.8 - 123.8 (7.7)" "0.1 - 131.2 (6.6)"
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-K4-A3WV 
"DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-K4-A3WV 
"DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BL-A0C8                      TCGA-BL-A13I 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BL-A13J                      TCGA-BL-A3JM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A0S7                      TCGA-BT-A0YX 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20J                      TCGA-BT-A20N 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20O                      TCGA-BT-A20P 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20Q                      TCGA-BT-A20R 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20T                      TCGA-BT-A20U 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A20V                      TCGA-BT-A20W 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-BT-A20X                      TCGA-BT-A2LA 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-BT-A2LD                      TCGA-BT-A3PH 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-C4-A0EZ                      TCGA-C4-A0F0 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-C4-A0F6                      TCGA-CF-A1HR 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CF-A1HS                      TCGA-CF-A27C 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YN                      TCGA-CU-A0YO 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A0YR                      TCGA-CU-A3KJ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-CU-A3QU                      TCGA-CU-A3YL 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A3                      TCGA-DK-A1A5 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1A6                      TCGA-DK-A1A7 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A1AA                      TCGA-DK-A1AB 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AC                      TCGA-DK-A1AD 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AE                      TCGA-DK-A1AF 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A1AG                      TCGA-DK-A2HX 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I1                      TCGA-DK-A2I2 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A2I4                      TCGA-DK-A2I6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IK                      TCGA-DK-A3IL 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IM                      TCGA-DK-A3IN 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-DK-A3IQ                      TCGA-DK-A3IS 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IT                      TCGA-DK-A3IU 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3IV                      TCGA-DK-A3WW 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3WX                      TCGA-DK-A3WY 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-DK-A3X1                      TCGA-DK-A3X2 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-E5-A2PC                      TCGA-E7-A3Y1 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3B3                      TCGA-FD-A3B4 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B5                      TCGA-FD-A3B6 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3B7                      TCGA-FD-A3B8 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3N5                      TCGA-FD-A3N6 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3NA                      TCGA-FD-A3SJ 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SL                      TCGA-FD-A3SM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SN                      TCGA-FD-A3SO 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A3SP                      TCGA-FD-A3SQ 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FD-A3SR                      TCGA-FD-A3SS 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FD-A43N                      TCGA-FD-A43U 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-FJ-A3Z7                      TCGA-FJ-A3ZE 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-FJ-A3ZF                      TCGA-FT-A3EE 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EF                      TCGA-G2-A2EJ 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EK                      TCGA-G2-A2EL 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A2EO                      TCGA-G2-A2ES 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-G2-A3IB                      TCGA-G2-A3IE 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-G2-A3VY                      TCGA-GC-A3BM 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3I6                      TCGA-GC-A3OO 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3RB                      TCGA-GC-A3RC 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GC-A3RD                      TCGA-GC-A3WC 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GC-A3YS                      TCGA-GD-A2C5 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-GD-A3OP                      TCGA-GD-A3OQ 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GD-A3OS                      TCGA-GU-A42P 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GU-A42Q                      TCGA-GU-A42R 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3JV                      TCGA-GV-A3JW 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3JX                      TCGA-GV-A3JZ 
      "DEL PEAK 31(22Q13.32) CNV" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QF                      TCGA-GV-A3QH 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A3QI                      TCGA-GV-A3QK 
"DEL PEAK 31(22Q13.32) WILD-TYPE" "DEL PEAK 31(22Q13.32) WILD-TYPE" 
                     TCGA-GV-A40E                      TCGA-GV-A40G 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-H4-A2HO                      TCGA-H4-A2HQ 
"DEL PEAK 31(22Q13.32) WILD-TYPE"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-K4-A3WS                      TCGA-K4-A3WU 
      "DEL PEAK 31(22Q13.32) CNV"       "DEL PEAK 31(22Q13.32) CNV" 
                     TCGA-K4-A3WV 
"DEL PEAK 31(22Q13.32) WILD-TYPE" 
[1] "hr=" "1.1"
D59V2, continuous
D59V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 31(22Q13.32) CNV         14   40
  DEL PEAK 31(22Q13.32) WILD-TYPE   20   60
        clus
vv       DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE
  FEMALE                        14                              20
  MALE                          40                              60
D59V4, continuous
D59V5, continuous
                                 vv
clus                              M0 M1 MX
  DEL PEAK 31(22Q13.32) CNV       24  3 26
  DEL PEAK 31(22Q13.32) WILD-TYPE 53  2 25
D59V6, multiclass
    clus
vv   DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE
  M0                        24                              53
  M1                         3                               2
  MX                        26                              25
                                 vv
clus                              N0 N1 N2 N3 NX
  DEL PEAK 31(22Q13.32) CNV       27  7 13  2  4
  DEL PEAK 31(22Q13.32) WILD-TYPE 48  7 14  3  6
D59V7, multiclass
D59V8, continuous
D59V9, continuous
                                 vv
clus                              STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 31(22Q13.32) CNV             0       14        15       24
  DEL PEAK 31(22Q13.32) WILD-TYPE       1       22        29       24
D59V10, multiclass
           clus
vv          DEL PEAK 31(22Q13.32) CNV DEL PEAK 31(22Q13.32) WILD-TYPE
  STAGE I                           0                               1
  STAGE II                         14                              22
  STAGE III                        15                              29
  STAGE IV                         24                              24

Clustering(60) Variable = Del Peak 32(Xp11.3)
D60V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 32(XP11.3) CNV       23 10
  DEL PEAK 32(XP11.3) WILD-TYPE 70 24
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                           33                            94 
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                           10                            24 
$`DEL PEAK 32(XP11.3) CNV`
TCGA-BL-A13J TCGA-BT-A20P TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A3PH TCGA-CF-A27C 
        2.66        17.85        14.89         5.06         4.64         0.69 
TCGA-CU-A0YN TCGA-CU-A3QU TCGA-DK-A1A5 TCGA-DK-A1AA TCGA-DK-A1AB TCGA-DK-A1AD 
       12.92         5.19         2.14         7.04         8.91       100.47 
TCGA-DK-A1AG TCGA-DK-A2I6 TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IV TCGA-E5-A2PC 
        6.64        75.32        37.84         5.52         9.67        36.43 
TCGA-FD-A3B4 TCGA-FD-A3B6 TCGA-FD-A3SN TCGA-FD-A3SR TCGA-FD-A3SS TCGA-G2-A2EL 
        8.32         6.87         6.81        19.79         1.94        26.93 
TCGA-G2-A3IB TCGA-G2-A3VY TCGA-GC-A3BM TCGA-GD-A3OS TCGA-GV-A3JX TCGA-GV-A3QH 
        7.04         0.82         2.86         5.82         6.15         7.79 
TCGA-GV-A3QI TCGA-H4-A2HQ TCGA-K4-A3WS 
        4.11         6.71         8.71 

$`DEL PEAK 32(XP11.3) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX TCGA-BT-A20J 
       12.79         7.33         6.74         6.58        11.93        19.00 
TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20W 
       26.10        12.16        19.46         5.06         8.61         8.35 
TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 TCGA-C4-A0F6 
        8.25         5.88         3.65         8.98         1.94         2.01 
TCGA-CF-A1HR TCGA-CF-A1HS TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ TCGA-CU-A3YL 
        0.46         0.43         4.90         7.20         5.46         8.09 
TCGA-DK-A1A3 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AC TCGA-DK-A1AE TCGA-DK-A1AF 
        2.53        31.40         8.98       118.88         7.17         5.85 
TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A3IK TCGA-DK-A3IL 
        1.81        10.59         7.76       123.85         2.20         3.98 
TCGA-DK-A3IM TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX 
        7.82         8.22        10.49        11.51         8.28        10.55 
TCGA-DK-A3WY TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 
      131.15        41.03        17.98         0.10         8.81         8.94 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ 
        4.01        11.05         8.94         7.96        32.02        24.30 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A43N 
       10.98         6.12         5.49         4.54        46.78         7.89 
TCGA-FD-A43U TCGA-FJ-A3Z7 TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-FT-A3EE TCGA-G2-A2EF 
        6.84        15.16         3.48         4.08         3.22        49.91 
TCGA-G2-A2EJ TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-GC-A3I6 
       26.50         5.65        32.78        17.26        20.12         2.24 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS 
        1.32         4.50         1.38         1.02         2.50         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GU-A42P TCGA-GU-A42Q TCGA-GU-A42R 
        7.69         2.10         3.12         6.38         7.56         3.22 
TCGA-GV-A3JV TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QK TCGA-GV-A40E 
        4.37         6.41         5.69         7.63         6.64         6.38 
TCGA-GV-A40G TCGA-H4-A2HO TCGA-K4-A3WU TCGA-K4-A3WV 
        5.33         1.51         3.42         4.64 

      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                         0.69                          0.10 
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                       100.47                        131.15 
      DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE 
                        6.870                         7.185 
[1] "0.7 - 100.5 (6.9)" "0.1 - 131.2 (7.2)"
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BL-A0C8                    TCGA-BL-A13I 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BL-A13J                    TCGA-BL-A3JM 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A0S7                    TCGA-BT-A0YX 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20J                    TCGA-BT-A20N 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20O                    TCGA-BT-A20P 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-BT-A20Q                    TCGA-BT-A20R 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20T                    TCGA-BT-A20U 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20V                    TCGA-BT-A20W 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A20X                    TCGA-BT-A2LA 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-BT-A2LD                    TCGA-BT-A3PH 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-C4-A0EZ                    TCGA-C4-A0F0 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-C4-A0F6                    TCGA-CF-A1HR 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CF-A1HS                    TCGA-CF-A27C 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-CU-A0YN                    TCGA-CU-A0YO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A0YR                    TCGA-CU-A3KJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-CU-A3QU                    TCGA-CU-A3YL 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1A3                    TCGA-DK-A1A5 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1A6                    TCGA-DK-A1A7 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AA                    TCGA-DK-A1AB 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AC                    TCGA-DK-A1AD 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A1AE                    TCGA-DK-A1AF 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A1AG                    TCGA-DK-A2HX 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I1                    TCGA-DK-A2I2 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A2I4                    TCGA-DK-A2I6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IK                    TCGA-DK-A3IL 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IM                    TCGA-DK-A3IN 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IQ                    TCGA-DK-A3IS 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-DK-A3IT                    TCGA-DK-A3IU 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3IV                    TCGA-DK-A3WW 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3WX                    TCGA-DK-A3WY 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-DK-A3X1                    TCGA-DK-A3X2 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-E5-A2PC                    TCGA-E7-A3Y1 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3B3                    TCGA-FD-A3B4 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B5                    TCGA-FD-A3B6 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A3B7                    TCGA-FD-A3B8 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3N5                    TCGA-FD-A3N6 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3NA                    TCGA-FD-A3SJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SL                    TCGA-FD-A3SM 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SN                    TCGA-FD-A3SO 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SP                    TCGA-FD-A3SQ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FD-A3SR                    TCGA-FD-A3SS 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-FD-A43N                    TCGA-FD-A43U 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FJ-A3Z7                    TCGA-FJ-A3ZE 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-FJ-A3ZF                    TCGA-FT-A3EE 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EF                    TCGA-G2-A2EJ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A2EK                    TCGA-G2-A2EL 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-G2-A2EO                    TCGA-G2-A2ES 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A3IB                    TCGA-G2-A3IE 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-G2-A3VY                    TCGA-GC-A3BM 
      "DEL PEAK 32(XP11.3) CNV"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GC-A3I6                    TCGA-GC-A3OO 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3RB                    TCGA-GC-A3RC 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3RD                    TCGA-GC-A3WC 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GC-A3YS                    TCGA-GD-A2C5 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A3OP                    TCGA-GD-A3OQ 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GD-A3OS                    TCGA-GU-A42P 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GU-A42Q                    TCGA-GU-A42R 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3JV                    TCGA-GV-A3JW 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3JX                    TCGA-GV-A3JZ 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A3QF                    TCGA-GV-A3QH 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-GV-A3QI                    TCGA-GV-A3QK 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-GV-A40E                    TCGA-GV-A40G 
"DEL PEAK 32(XP11.3) WILD-TYPE" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-H4-A2HO                    TCGA-H4-A2HQ 
"DEL PEAK 32(XP11.3) WILD-TYPE"       "DEL PEAK 32(XP11.3) CNV" 
                   TCGA-K4-A3WS                    TCGA-K4-A3WU 
      "DEL PEAK 32(XP11.3) CNV" "DEL PEAK 32(XP11.3) WILD-TYPE" 
                   TCGA-K4-A3WV 
"DEL PEAK 32(XP11.3) WILD-TYPE" 
[1] "hr=" "1.1"
D60V2, continuous
D60V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 32(XP11.3) CNV          7   30
  DEL PEAK 32(XP11.3) WILD-TYPE   27   70
        clus
vv       DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE
  FEMALE                       7                            27
  MALE                        30                            70
D60V4, continuous
D60V5, continuous
                               vv
clus                            M0 M1 MX
  DEL PEAK 32(XP11.3) CNV       22  1 13
  DEL PEAK 32(XP11.3) WILD-TYPE 55  4 38
D60V6, multiclass
    clus
vv   DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE
  M0                      22                            55
  M1                       1                             4
  MX                      13                            38
                               vv
clus                            N0 N1 N2 N3 NX
  DEL PEAK 32(XP11.3) CNV       19  4  5  1  6
  DEL PEAK 32(XP11.3) WILD-TYPE 56 10 22  4  4
D60V7, multiclass
D60V8, continuous
D60V9, continuous
                               vv
clus                            STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 32(XP11.3) CNV             0       14         9       13
  DEL PEAK 32(XP11.3) WILD-TYPE       1       22        35       35
D60V10, multiclass
           clus
vv          DEL PEAK 32(XP11.3) CNV DEL PEAK 32(XP11.3) WILD-TYPE
  STAGE I                         0                             1
  STAGE II                       14                            22
  STAGE III                       9                            35
  STAGE IV                       13                            35

Clustering(61) Variable = Del Peak 33(Xq21.33)
D61V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 33(XQ21.33) CNV       23  6
  DEL PEAK 33(XQ21.33) WILD-TYPE 70 28
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                            29                             98 
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                             6                             28 
$`DEL PEAK 33(XQ21.33) CNV`
TCGA-BT-A20T TCGA-BT-A20V TCGA-BT-A20X TCGA-BT-A3PH TCGA-CF-A1HS TCGA-CF-A27C 
       14.89         5.06         8.25         4.64         0.43         0.69 
TCGA-CU-A3KJ TCGA-CU-A3QU TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A3IS TCGA-DK-A3IT 
        5.46         5.19         8.91       118.88        37.84         5.52 
TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3SN TCGA-FD-A3SS TCGA-FJ-A3Z7 TCGA-FT-A3EE 
       36.43         8.32         6.81         1.94        15.16         3.22 
TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GU-A42P TCGA-GV-A3JW TCGA-GV-A3JX 
       26.93         7.04         2.86         6.38         6.41         6.15 
TCGA-GV-A3QH TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WV 
        7.79         4.11         5.33         6.71         4.64 

$`DEL PEAK 33(XQ21.33) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R 
       19.00        26.10        12.16        17.85        19.46         5.06 
TCGA-BT-A20U TCGA-BT-A20W TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 
        8.61         8.35         5.88         3.65         8.98         1.94 
TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3YL 
        2.01         0.46        12.92         4.90         7.20         8.09 
TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA TCGA-DK-A1AD 
        2.53         2.14        31.40         8.98         7.04       100.47 
TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 TCGA-DK-A2I2 
        7.17         5.85         6.64         1.81        10.59         7.76 
TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM TCGA-DK-A3IN 
      123.85        75.32         2.20         3.98         7.82         8.22 
TCGA-DK-A3IQ TCGA-DK-A3IU TCGA-DK-A3IV TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY 
       10.49        11.51         9.67         8.28        10.55       131.15 
TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B6 
       41.03        17.98         0.10         8.81         8.94         6.87 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ 
        4.01        11.05         8.94         7.96        32.02        24.30 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR 
       10.98         6.12         5.49         4.54        46.78        19.79 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-FJ-A3ZF TCGA-G2-A2EF TCGA-G2-A2EJ 
        7.89         6.84         3.48         4.08        49.91        26.50 
TCGA-G2-A2EK TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3I6 
        5.65        32.78        17.26        20.12         0.82         2.24 
TCGA-GC-A3OO TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS 
        1.32         4.50         1.38         1.02         2.50         1.08 
TCGA-GD-A2C5 TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R 
        7.69         2.10         3.12         5.82         7.56         3.22 
TCGA-GV-A3JV TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QK TCGA-GV-A40E TCGA-H4-A2HO 
        4.37         5.69         7.63         6.64         6.38         1.51 
TCGA-K4-A3WS TCGA-K4-A3WU 
        8.71         3.42 

      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                          0.43                           0.10 
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                        118.88                         131.15 
      DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE 
                         6.380                          7.445 
[1] "0.4 - 118.9 (6.4)" "0.1 - 131.2 (7.4)"
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-BL-A0C8                     TCGA-BL-A13I 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BL-A13J                     TCGA-BL-A3JM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A0S7                     TCGA-BT-A0YX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20J                     TCGA-BT-A20N 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20O                     TCGA-BT-A20P 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20Q                     TCGA-BT-A20R 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20T                     TCGA-BT-A20U 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20V                     TCGA-BT-A20W 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A20X                     TCGA-BT-A2LA 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-BT-A2LD                     TCGA-BT-A3PH 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-C4-A0EZ                     TCGA-C4-A0F0 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-C4-A0F6                     TCGA-CF-A1HR 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CF-A1HS                     TCGA-CF-A27C 
      "DEL PEAK 33(XQ21.33) CNV"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A0YN                     TCGA-CU-A0YO 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-CU-A0YR                     TCGA-CU-A3KJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-CU-A3QU                     TCGA-CU-A3YL 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A3                     TCGA-DK-A1A5 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1A6                     TCGA-DK-A1A7 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AA                     TCGA-DK-A1AB 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A1AC                     TCGA-DK-A1AD 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AE                     TCGA-DK-A1AF 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A1AG                     TCGA-DK-A2HX 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I1                     TCGA-DK-A2I2 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A2I4                     TCGA-DK-A2I6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IK                     TCGA-DK-A3IL 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IM                     TCGA-DK-A3IN 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IQ                     TCGA-DK-A3IS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-DK-A3IT                     TCGA-DK-A3IU 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3IV                     TCGA-DK-A3WW 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3WX                     TCGA-DK-A3WY 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-DK-A3X1                     TCGA-DK-A3X2 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-E5-A2PC                     TCGA-E7-A3Y1 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B3                     TCGA-FD-A3B4 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A3B5                     TCGA-FD-A3B6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3B7                     TCGA-FD-A3B8 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3N5                     TCGA-FD-A3N6 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3NA                     TCGA-FD-A3SJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SL                     TCGA-FD-A3SM 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SN                     TCGA-FD-A3SO 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SP                     TCGA-FD-A3SQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FD-A3SR                     TCGA-FD-A3SS 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-FD-A43N                     TCGA-FD-A43U 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FJ-A3Z7                     TCGA-FJ-A3ZE 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-FJ-A3ZF                     TCGA-FT-A3EE 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-G2-A2EF                     TCGA-G2-A2EJ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A2EK                     TCGA-G2-A2EL 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-G2-A2EO                     TCGA-G2-A2ES 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A3IB                     TCGA-G2-A3IE 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-G2-A3VY                     TCGA-GC-A3BM 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GC-A3I6                     TCGA-GC-A3OO 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3RB                     TCGA-GC-A3RC 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3RD                     TCGA-GC-A3WC 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GC-A3YS                     TCGA-GD-A2C5 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A3OP                     TCGA-GD-A3OQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GD-A3OS                     TCGA-GU-A42P 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GU-A42Q                     TCGA-GU-A42R 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3JV                     TCGA-GV-A3JW 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3JX                     TCGA-GV-A3JZ 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A3QF                     TCGA-GV-A3QH 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-GV-A3QI                     TCGA-GV-A3QK 
      "DEL PEAK 33(XQ21.33) CNV" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-GV-A40E                     TCGA-GV-A40G 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-H4-A2HO                     TCGA-H4-A2HQ 
"DEL PEAK 33(XQ21.33) WILD-TYPE"       "DEL PEAK 33(XQ21.33) CNV" 
                    TCGA-K4-A3WS                     TCGA-K4-A3WU 
"DEL PEAK 33(XQ21.33) WILD-TYPE" "DEL PEAK 33(XQ21.33) WILD-TYPE" 
                    TCGA-K4-A3WV 
      "DEL PEAK 33(XQ21.33) CNV" 
[1] "hr=" "1.2"
D61V2, continuous
D61V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 33(XQ21.33) CNV          8   23
  DEL PEAK 33(XQ21.33) WILD-TYPE   26   77
        clus
vv       DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE
  FEMALE                        8                             26
  MALE                         23                             77
D61V4, continuous
D61V5, continuous
                                vv
clus                             M0 M1 MX
  DEL PEAK 33(XQ21.33) CNV       15  1 15
  DEL PEAK 33(XQ21.33) WILD-TYPE 62  4 36
D61V6, multiclass
    clus
vv   DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE
  M0                       15                             62
  M1                        1                              4
  MX                       15                             36
                                vv
clus                             N0 N1 N2 N3 NX
  DEL PEAK 33(XQ21.33) CNV       15  4  5  1  5
  DEL PEAK 33(XQ21.33) WILD-TYPE 60 10 22  4  5
D61V7, multiclass
D61V8, continuous
D61V9, continuous
                                vv
clus                             STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 33(XQ21.33) CNV             0        9         7       12
  DEL PEAK 33(XQ21.33) WILD-TYPE       1       27        37       36
D61V10, multiclass
           clus
vv          DEL PEAK 33(XQ21.33) CNV DEL PEAK 33(XQ21.33) WILD-TYPE
  STAGE I                          0                              1
  STAGE II                         9                             27
  STAGE III                        7                             37
  STAGE IV                        12                             36

Clustering(62) Variable = Del Peak 34(Xq23)
D62V1, survival
                             sevent
clus2                          0  1
  DEL PEAK 34(XQ23) CNV       21  7
  DEL PEAK 34(XQ23) WILD-TYPE 72 27
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                         28                          99 
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                          7                          27 
$`DEL PEAK 34(XQ23) CNV`
TCGA-BT-A20J TCGA-BT-A20N TCGA-BT-A20T TCGA-BT-A3PH TCGA-CF-A1HS TCGA-CF-A27C 
       19.00        26.10        14.89         4.64         0.43         0.69 
TCGA-CU-A3QU TCGA-DK-A1AB TCGA-DK-A1AC TCGA-DK-A3IS TCGA-DK-A3IT TCGA-DK-A3IV 
        5.19         8.91       118.88        37.84         5.52         9.67 
TCGA-E5-A2PC TCGA-FD-A3B4 TCGA-FD-A3SN TCGA-FD-A3SS TCGA-FJ-A3Z7 TCGA-FJ-A3ZF 
       36.43         8.32         6.81         1.94        15.16         4.08 
TCGA-FT-A3EE TCGA-G2-A2EL TCGA-G2-A3IB TCGA-GC-A3BM TCGA-GU-A42P TCGA-GV-A3JX 
        3.22        26.93         7.04         2.86         6.38         6.15 
TCGA-GV-A3QI TCGA-GV-A40G TCGA-H4-A2HQ TCGA-K4-A3WV 
        4.11         5.33         6.71         4.64 

$`DEL PEAK 34(XQ23) WILD-TYPE`
TCGA-BL-A0C8 TCGA-BL-A13I TCGA-BL-A13J TCGA-BL-A3JM TCGA-BT-A0S7 TCGA-BT-A0YX 
       12.79         7.33         2.66         6.74         6.58        11.93 
TCGA-BT-A20O TCGA-BT-A20P TCGA-BT-A20Q TCGA-BT-A20R TCGA-BT-A20U TCGA-BT-A20V 
       12.16        17.85        19.46         5.06         8.61         5.06 
TCGA-BT-A20W TCGA-BT-A20X TCGA-BT-A2LA TCGA-BT-A2LD TCGA-C4-A0EZ TCGA-C4-A0F0 
        8.35         8.25         5.88         3.65         8.98         1.94 
TCGA-C4-A0F6 TCGA-CF-A1HR TCGA-CU-A0YN TCGA-CU-A0YO TCGA-CU-A0YR TCGA-CU-A3KJ 
        2.01         0.46        12.92         4.90         7.20         5.46 
TCGA-CU-A3YL TCGA-DK-A1A3 TCGA-DK-A1A5 TCGA-DK-A1A6 TCGA-DK-A1A7 TCGA-DK-A1AA 
        8.09         2.53         2.14        31.40         8.98         7.04 
TCGA-DK-A1AD TCGA-DK-A1AE TCGA-DK-A1AF TCGA-DK-A1AG TCGA-DK-A2HX TCGA-DK-A2I1 
      100.47         7.17         5.85         6.64         1.81        10.59 
TCGA-DK-A2I2 TCGA-DK-A2I4 TCGA-DK-A2I6 TCGA-DK-A3IK TCGA-DK-A3IL TCGA-DK-A3IM 
        7.76       123.85        75.32         2.20         3.98         7.82 
TCGA-DK-A3IN TCGA-DK-A3IQ TCGA-DK-A3IU TCGA-DK-A3WW TCGA-DK-A3WX TCGA-DK-A3WY 
        8.22        10.49        11.51         8.28        10.55       131.15 
TCGA-DK-A3X1 TCGA-DK-A3X2 TCGA-E7-A3Y1 TCGA-FD-A3B3 TCGA-FD-A3B5 TCGA-FD-A3B6 
       41.03        17.98         0.10         8.81         8.94         6.87 
TCGA-FD-A3B7 TCGA-FD-A3B8 TCGA-FD-A3N5 TCGA-FD-A3N6 TCGA-FD-A3NA TCGA-FD-A3SJ 
        4.01        11.05         8.94         7.96        32.02        24.30 
TCGA-FD-A3SL TCGA-FD-A3SM TCGA-FD-A3SO TCGA-FD-A3SP TCGA-FD-A3SQ TCGA-FD-A3SR 
       10.98         6.12         5.49         4.54        46.78        19.79 
TCGA-FD-A43N TCGA-FD-A43U TCGA-FJ-A3ZE TCGA-G2-A2EF TCGA-G2-A2EJ TCGA-G2-A2EK 
        7.89         6.84         3.48        49.91        26.50         5.65 
TCGA-G2-A2EO TCGA-G2-A2ES TCGA-G2-A3IE TCGA-G2-A3VY TCGA-GC-A3I6 TCGA-GC-A3OO 
       32.78        17.26        20.12         0.82         2.24         1.32 
TCGA-GC-A3RB TCGA-GC-A3RC TCGA-GC-A3RD TCGA-GC-A3WC TCGA-GC-A3YS TCGA-GD-A2C5 
        4.50         1.38         1.02         2.50         1.08         7.69 
TCGA-GD-A3OP TCGA-GD-A3OQ TCGA-GD-A3OS TCGA-GU-A42Q TCGA-GU-A42R TCGA-GV-A3JV 
        2.10         3.12         5.82         7.56         3.22         4.37 
TCGA-GV-A3JW TCGA-GV-A3JZ TCGA-GV-A3QF TCGA-GV-A3QH TCGA-GV-A3QK TCGA-GV-A40E 
        6.41         5.69         7.63         7.79         6.64         6.38 
TCGA-H4-A2HO TCGA-K4-A3WS TCGA-K4-A3WU 
        1.51         8.71         3.42 

      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                       0.43                        0.10 
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                     118.88                      131.15 
      DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE 
                      6.545                       7.200 
[1] "0.4 - 118.9 (6.5)" "0.1 - 131.2 (7.2)"
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-K4-A3WV 
      "DEL PEAK 34(XQ23) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-K4-A3WV 
      "DEL PEAK 34(XQ23) CNV" 
                 TCGA-BL-A0C8                  TCGA-BL-A13I 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BL-A13J                  TCGA-BL-A3JM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A0S7                  TCGA-BT-A0YX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20J                  TCGA-BT-A20N 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-BT-A20O                  TCGA-BT-A20P 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20Q                  TCGA-BT-A20R 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20T                  TCGA-BT-A20U 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20V                  TCGA-BT-A20W 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A20X                  TCGA-BT-A2LA 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-BT-A2LD                  TCGA-BT-A3PH 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-C4-A0EZ                  TCGA-C4-A0F0 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-C4-A0F6                  TCGA-CF-A1HR 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CF-A1HS                  TCGA-CF-A27C 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-CU-A0YN                  TCGA-CU-A0YO 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A0YR                  TCGA-CU-A3KJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-CU-A3QU                  TCGA-CU-A3YL 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A3                  TCGA-DK-A1A5 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1A6                  TCGA-DK-A1A7 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AA                  TCGA-DK-A1AB 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A1AC                  TCGA-DK-A1AD 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AE                  TCGA-DK-A1AF 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A1AG                  TCGA-DK-A2HX 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I1                  TCGA-DK-A2I2 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A2I4                  TCGA-DK-A2I6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IK                  TCGA-DK-A3IL 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IM                  TCGA-DK-A3IN 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IQ                  TCGA-DK-A3IS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-DK-A3IT                  TCGA-DK-A3IU 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3IV                  TCGA-DK-A3WW 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3WX                  TCGA-DK-A3WY 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-DK-A3X1                  TCGA-DK-A3X2 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-E5-A2PC                  TCGA-E7-A3Y1 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B3                  TCGA-FD-A3B4 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A3B5                  TCGA-FD-A3B6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3B7                  TCGA-FD-A3B8 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3N5                  TCGA-FD-A3N6 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3NA                  TCGA-FD-A3SJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SL                  TCGA-FD-A3SM 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SN                  TCGA-FD-A3SO 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SP                  TCGA-FD-A3SQ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FD-A3SR                  TCGA-FD-A3SS 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-FD-A43N                  TCGA-FD-A43U 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FJ-A3Z7                  TCGA-FJ-A3ZE 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-FJ-A3ZF                  TCGA-FT-A3EE 
      "DEL PEAK 34(XQ23) CNV"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-G2-A2EF                  TCGA-G2-A2EJ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A2EK                  TCGA-G2-A2EL 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-G2-A2EO                  TCGA-G2-A2ES 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A3IB                  TCGA-G2-A3IE 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-G2-A3VY                  TCGA-GC-A3BM 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GC-A3I6                  TCGA-GC-A3OO 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3RB                  TCGA-GC-A3RC 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3RD                  TCGA-GC-A3WC 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GC-A3YS                  TCGA-GD-A2C5 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A3OP                  TCGA-GD-A3OQ 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GD-A3OS                  TCGA-GU-A42P 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-GU-A42Q                  TCGA-GU-A42R 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3JV                  TCGA-GV-A3JW 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3JX                  TCGA-GV-A3JZ 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3QF                  TCGA-GV-A3QH 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A3QI                  TCGA-GV-A3QK 
      "DEL PEAK 34(XQ23) CNV" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-GV-A40E                  TCGA-GV-A40G 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-H4-A2HO                  TCGA-H4-A2HQ 
"DEL PEAK 34(XQ23) WILD-TYPE"       "DEL PEAK 34(XQ23) CNV" 
                 TCGA-K4-A3WS                  TCGA-K4-A3WU 
"DEL PEAK 34(XQ23) WILD-TYPE" "DEL PEAK 34(XQ23) WILD-TYPE" 
                 TCGA-K4-A3WV 
      "DEL PEAK 34(XQ23) CNV" 
[1] "hr=" "1.2"
D62V2, continuous
D62V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 34(XQ23) CNV          7   23
  DEL PEAK 34(XQ23) WILD-TYPE   27   77
        clus
vv       DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE
  FEMALE                     7                          27
  MALE                      23                          77
D62V4, continuous
D62V5, continuous
                             vv
clus                          M0 M1 MX
  DEL PEAK 34(XQ23) CNV       14  1 15
  DEL PEAK 34(XQ23) WILD-TYPE 63  4 36
D62V6, multiclass
    clus
vv   DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE
  M0                    14                          63
  M1                     1                           4
  MX                    15                          36
                             vv
clus                          N0 N1 N2 N3 NX
  DEL PEAK 34(XQ23) CNV       17  4  3  1  4
  DEL PEAK 34(XQ23) WILD-TYPE 58 10 24  4  6
D62V7, multiclass
D62V8, continuous
D62V9, continuous
                             vv
clus                          STAGE I STAGE II STAGE III STAGE IV
  DEL PEAK 34(XQ23) CNV             0        9         8       10
  DEL PEAK 34(XQ23) WILD-TYPE       1       27        36       38
D62V10, multiclass
           clus
vv          DEL PEAK 34(XQ23) CNV DEL PEAK 34(XQ23) WILD-TYPE
  STAGE I                       0                           1
  STAGE II                      9                          27
  STAGE III                     8                          36
  STAGE IV                     10                          38
                         V1.D                            V2 
              "Time to Death"                         "AGE" 
                           V3                            V4 
                     "GENDER" "KARNOFSKY.PERFORMANCE.SCORE" 
                           V5                            V6 
      "NUMBERPACKYEARSSMOKED"          "DISTANT.METASTASIS" 
                           V7                            V8 
      "LYMPH.NODE.METASTASIS"       "NUMBER.OF.LYMPH.NODES" 
                           V9                           V10 
            "TUMOR.STAGECODE"       "NEOPLASM.DISEASESTAGE" 
> q(save="no")
