PARADIGM pathway analysis of mRNA expression data
Colon/Rectal Adenocarcinoma (Primary solid tumor)
23 May 2013  |  analyses__2013_05_23
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2013): PARADIGM pathway analysis of mRNA expression data. Broad Institute of MIT and Harvard. doi:10.7908/C16971KQ
- Overview
+ Introduction
- Summary

There were 43 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
TCGA08_retinoblastoma 132
Syndecan-1-mediated signaling events 73
Signaling events mediated by Stem cell factor receptor (c-Kit) 65
FAS signaling pathway (CD95) 58
BCR signaling pathway 54
FOXM1 transcription factor network 48
Fc-epsilon receptor I signaling in mast cells 47
Glypican 1 network 44
HIF-1-alpha transcription factor network 40
Reelin signaling pathway 35
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data