Clinical Features Time to Death AGE HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION COMPLETENESS.OF.RESECTION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Amp Peak 1(1p35.2) 0 (0%) 410 0.8226 1 0.00014145 0.0492 2.0276e-12 8.8e-10 1 1 0.8763 1 Amp Peak 2(1p34.2) 0 (0%) 399 0.70514 1 3.4817e-05 0.0126 3.9561e-17 1.82e-14 0.34717 1 0.12926 1 Amp Peak 3(1p22.3) 0 (0%) 378 0.60299 1 0.00034486 0.117 0.0017376 0.551 1 1 0.46581 1 Amp Peak 4(1q21.3) 0 (0%) 253 0.13269 1 1.9938e-06 0.000766 0.00033189 0.114 0.53471 1 0.54181 1 Amp Peak 5(1q22) 0 (0%) 241 0.027848 1 9.359e-08 3.77e-05 1.3775e-06 0.00053 0.47077 1 0.31733 1 Amp Peak 6(1q42.3) 0 (0%) 266 0.30677 1 0.0012456 0.401 0.11426 1 0.67619 1 0.34626 1 Amp Peak 7(2p23.2) 0 (0%) 355 0.0076042 1 0.0015066 0.482 1.102e-13 4.87e-11 0.046066 1 0.83045 1 Amp Peak 8(2q13) 0 (0%) 362 0.023489 1 0.00012219 0.0429 6.0527e-16 2.75e-13 0.79943 1 0.19853 1 Amp Peak 9(3p25.1) 0 (0%) 391 0.48746 1 0.00013155 0.046 1.6868e-09 7.07e-07 0.10337 1 0.86431 1 Amp Peak 10(3p14.1) 0 (0%) 404 0.00572 1 0.0090579 1 0.00013185 0.046 0.031652 1 0.37664 1 Amp Peak 11(3q26.2) 0 (0%) 320 0.18981 1 4.2835e-10 1.82e-07 2.4926e-24 1.2e-21 0.14455 1 0.19946 1 Amp Peak 12(3q26.2) 0 (0%) 328 0.1132 1 7.5396e-08 3.05e-05 6.9741e-24 3.36e-21 0.16903 1 0.14428 1 Amp Peak 13(4p16.3) 0 (0%) 412 0.95513 1 3.3072e-07 0.00013 1.5689e-13 6.9e-11 0.59566 1 0.59443 1 Amp Peak 14(5p15.33) 0 (0%) 387 0.058363 1 0.0045239 1 2.2089e-16 1.01e-13 0.47045 1 0.090492 1 Amp Peak 15(5q35.3) 0 (0%) 412 0.10686 1 0.00033634 0.115 8.186e-09 3.41e-06 0.28729 1 0.71065 1 Amp Peak 16(6p24.2) 0 (0%) 366 0.87756 1 2.8076e-07 0.00011 2.7497e-19 1.3e-16 0.24127 1 0.8196 1 Amp Peak 17(6q25.1) 0 (0%) 388 0.81667 1 0.0052935 1 1.7898e-05 0.0066 0.77069 1 0.26139 1 Amp Peak 18(7q22.1) 0 (0%) 382 0.00082032 0.272 0.05462 1 0.0028997 0.908 0.1598 1 0.48078 1 Amp Peak 19(8p11.21) 0 (0%) 319 1.0587e-05 0.00396 0.31114 1 1.0364e-07 4.14e-05 0.032194 1 0.0036181 1 Amp Peak 20(8q24.21) 0 (0%) 286 0.0010857 0.355 0.53085 1 6.0177e-13 2.62e-10 0.025478 1 0.032908 1 Amp Peak 21(8q24.21) 0 (0%) 277 0.0057358 1 0.20775 1 1.6409e-14 7.3e-12 0.011259 1 0.00050549 0.17 Amp Peak 22(9p24.2) 0 (0%) 405 0.8116 1 0.0048157 1 1.2809e-07 5.07e-05 0.31989 1 0.44469 1 Amp Peak 23(9q34.3) 0 (0%) 423 0.076831 1 0.00063075 0.211 4.8434e-07 0.000189 0.68907 1 0.29575 1 Amp Peak 24(10q22.2) 0 (0%) 331 0.2054 1 0.4394 1 0.042848 1 0.64413 1 0.38888 1 Amp Peak 25(11p11.2) 0 (0%) 414 0.036697 1 5.68e-05 0.0204 3.4768e-09 1.45e-06 0.85728 1 0.43513 1 Amp Peak 26(11q13.2) 0 (0%) 396 0.089261 1 0.00075415 0.25 1.0097e-07 4.04e-05 0.76043 1 0.13855 1 Amp Peak 27(12p12.1) 0 (0%) 384 0.85917 1 0.2988 1 4.4537e-08 1.81e-05 0.67198 1 0.29472 1 Amp Peak 28(12q13.11) 0 (0%) 385 0.71178 1 0.85347 1 9.6211e-08 3.86e-05 0.25205 1 0.25592 1 Amp Peak 29(12q13.2) 0 (0%) 378 0.99484 1 0.048497 1 5.0126e-07 0.000195 0.097507 1 0.05862 1 Amp Peak 30(13q34) 0 (0%) 409 0.84397 1 7.8409e-07 0.000303 2.6243e-13 1.15e-10 1 1 0.13046 1 Amp Peak 31(14q24.3) 0 (0%) 406 0.54285 1 2.4798e-05 0.00905 8.0616e-11 3.45e-08 0.18357 1 0.73756 1 Amp Peak 32(14q32.33) 0 (0%) 395 0.17359 1 0.00022341 0.0771 7.0375e-10 2.97e-07 0.12527 1 0.14241 1 Amp Peak 33(16p11.2) 0 (0%) 404 0.052811 1 0.00016145 0.0559 5.3952e-15 2.42e-12 0.87065 1 0.035857 1 Amp Peak 34(17q11.2) 0 (0%) 400 0.042626 1 0.00034756 0.118 1.3481e-16 6.2e-14 0.87409 1 0.00042656 0.144 Amp Peak 35(17q12) 0 (0%) 397 0.062913 1 2.1817e-05 0.00798 2.5807e-18 1.2e-15 0.75659 1 0.08551 1 Amp Peak 36(17q25.1) 0 (0%) 376 0.061795 1 2.0999e-05 0.00771 3.8053e-16 1.74e-13 0.89161 1 0.22646 1 Amp Peak 37(18p11.31) 0 (0%) 383 0.54275 1 0.0001513 0.0525 5.338e-20 2.52e-17 0.064703 1 0.0077417 1 Amp Peak 38(18q11.2) 0 (0%) 398 0.18547 1 0.0032039 1 3.112e-15 1.4e-12 0.53167 1 0.043959 1 Amp Peak 39(19p13.2) 0 (0%) 381 0.54132 1 1.422e-11 6.14e-09 2.9708e-19 1.4e-16 0.26215 1 0.7385 1 Amp Peak 40(19p13.11) 0 (0%) 381 0.47831 1 1.1323e-10 4.83e-08 6.9521e-22 3.3e-19 0.069934 1 0.29399 1 Amp Peak 41(19q12) 0 (0%) 370 0.0023964 0.752 1.9765e-10 8.42e-08 5.5714e-36 2.72e-33 0.69222 1 0.2341 1 Amp Peak 42(20p13) 0 (0%) 363 0.22629 1 1.0676e-05 0.00398 2.6534e-13 1.16e-10 0.24781 1 0.20434 1 Amp Peak 43(20q11.21) 0 (0%) 342 0.035483 1 2.1926e-07 8.64e-05 5.4034e-26 2.62e-23 0.05698 1 0.062332 1 Amp Peak 44(20q13.12) 0 (0%) 336 0.29915 1 3.1433e-08 1.28e-05 2.2847e-23 1.1e-20 0.013474 1 0.034372 1 Amp Peak 45(20q13.33) 0 (0%) 338 0.32677 1 1.1916e-07 4.73e-05 4.5913e-19 2.14e-16 0.0044668 1 0.025729 1 Amp Peak 46(22q12.2) 0 (0%) 408 0.62039 1 0.001591 0.508 2.8702e-18 1.33e-15 0.30575 1 0.00034 0.116 Amp Peak 47(Xp11.23) 0 (0%) 379 0.46046 1 0.15586 1 0.0090165 1 0.026396 1 0.36556 1 Amp Peak 48(Xq28) 0 (0%) 379 0.0085086 1 0.060351 1 0.00035416 0.12 1 1 0.24267 1 Del Peak 1(1p36.21) 0 (0%) 399 0.54625 1 6.4309e-05 0.0228 1.3623e-08 5.62e-06 0.63641 1 0.34648 1 Del Peak 2(1p36.11) 0 (0%) 391 0.41195 1 1.1967e-05 0.00445 3.0159e-13 1.31e-10 0.7661 1 0.011112 1 Del Peak 3(1q43) 0 (0%) 446 0.019933 1 0.047524 1 0.10568 1 0.11203 1 0.033757 1 Del Peak 4(2p25.3) 0 (0%) 432 0.046455 1 0.13119 1 0.0064149 1 0.14775 1 0.20124 1 Del Peak 5(2q22.1) 0 (0%) 416 5.0134e-08 2.03e-05 0.0068947 1 5.2894e-07 0.000205 0.024493 1 0.0034468 1 Del Peak 6(2q37.3) 0 (0%) 411 0.38347 1 0.0011522 0.373 0.0017957 0.567 0.2221 1 0.038044 1 Del Peak 7(3p14.2) 0 (0%) 395 0.86895 1 2.016e-05 0.00742 2.7594e-15 1.24e-12 0.35919 1 0.51868 1 Del Peak 8(3q13.31) 0 (0%) 432 0.7605 1 0.0016823 0.535 3.379e-06 0.00128 0.63322 1 0.92814 1 Del Peak 9(4p16.3) 0 (0%) 384 0.10836 1 9.0298e-05 0.0318 7.7273e-15 3.45e-12 0.32206 1 0.61762 1 Del Peak 10(4p15.31) 0 (0%) 383 0.12959 1 3.6846e-05 0.0133 5.2288e-14 2.32e-11 0.11849 1 0.23155 1 Del Peak 11(4q22.1) 0 (0%) 375 0.0062515 1 1.3132e-05 0.00487 2.3577e-23 1.13e-20 0.27856 1 0.031562 1 Del Peak 12(4q34.3) 0 (0%) 357 0.025465 1 3.8127e-06 0.00145 2.4972e-25 1.21e-22 0.38267 1 0.096786 1 Del Peak 13(5q11.2) 0 (0%) 373 0.10817 1 4.8659e-05 0.0176 2.8385e-22 1.35e-19 0.68745 1 0.3416 1 Del Peak 14(6q26) 0 (0%) 417 0.3597 1 0.0058921 1 2.2146e-09 9.26e-07 1 1 0.7767 1 Del Peak 15(7p22.3) 0 (0%) 395 0.013976 1 5.246e-05 0.0189 2.2172e-13 9.73e-11 0.54146 1 0.085448 1 Del Peak 16(7q11.22) 0 (0%) 422 0.56409 1 9.8906e-06 0.00371 9.3925e-08 3.78e-05 0.68901 1 0.45356 1 Del Peak 17(7q31.1) 0 (0%) 414 0.71632 1 2.6209e-06 0.000999 5.7645e-16 2.63e-13 0.71707 1 0.24004 1 Del Peak 18(7q36.3) 0 (0%) 404 0.62151 1 3.1156e-08 1.27e-05 3.5416e-16 1.62e-13 1 1 0.13855 1 Del Peak 19(8p23.2) 0 (0%) 367 0.31934 1 0.00094019 0.309 6.0359e-27 2.95e-24 0.51606 1 0.01302 1 Del Peak 20(9p23) 0 (0%) 401 0.31322 1 0.0008682 0.287 3.0401e-11 1.31e-08 0.26637 1 0.24371 1 Del Peak 21(9q34.11) 0 (0%) 350 0.22287 1 1.1165e-09 4.7e-07 1.1596e-17 5.37e-15 0.39354 1 0.31056 1 Del Peak 22(10q23.31) 0 (0%) 398 0.1009 1 0.0035069 1 2.5971e-06 0.000992 0.042575 1 0.090108 1 Del Peak 23(11p15.5) 0 (0%) 374 0.0089419 1 2.5349e-08 1.04e-05 2.9534e-21 1.4e-18 0.080078 1 0.024755 1 Del Peak 24(11q14.1) 0 (0%) 400 0.057885 1 1.3215e-05 0.00489 2.5699e-15 1.16e-12 0.42747 1 0.53442 1 Del Peak 25(11q25) 0 (0%) 382 0.0038931 1 8.098e-05 0.0286 9.5095e-16 4.31e-13 0.023647 1 0.26128 1 Del Peak 26(12q23.1) 0 (0%) 420 0.051638 1 0.006075 1 2.4402e-10 1.04e-07 0.55806 1 0.020483 1 Del Peak 27(12q24.33) 0 (0%) 407 0.1088 1 5.9878e-05 0.0213 1.2969e-13 5.72e-11 0.12781 1 0.014984 1 Del Peak 28(13q11) 0 (0%) 385 0.018445 1 0.0010833 0.355 4.5374e-10 1.92e-07 0.25205 1 0.062244 1 Del Peak 29(13q14.2) 0 (0%) 380 0.04963 1 0.00033815 0.116 2.9593e-05 0.0108 0.12527 1 0.21396 1 Del Peak 30(14q13.1) 0 (0%) 398 0.0022813 0.719 0.00062042 0.208 1.4267e-11 6.15e-09 0.75462 1 0.88059 1 Del Peak 31(15q15.1) 0 (0%) 346 0.02408 1 1.362e-08 5.62e-06 4.8027e-22 2.29e-19 0.069532 1 0.027508 1 Del Peak 32(15q23) 0 (0%) 365 0.044874 1 5.9405e-06 0.00223 6.5635e-23 3.14e-20 0.19581 1 0.43909 1 Del Peak 33(16p13.3) 0 (0%) 388 0.026154 1 2.0753e-08 8.53e-06 2.1463e-17 9.92e-15 0.55974 1 0.017584 1 Del Peak 34(16q21) 0 (0%) 332 0.033005 1 1.4193e-09 5.96e-07 2.8648e-23 1.37e-20 0.29617 1 0.12887 1 Del Peak 35(16q23.1) 0 (0%) 322 0.0407 1 1.1059e-08 4.59e-06 6.2659e-27 3.05e-24 0.4279 1 0.0053619 1 Del Peak 36(17p13.3) 0 (0%) 364 0.088282 1 5.7889e-05 0.0207 3.9915e-19 1.87e-16 0.30168 1 0.15073 1 Del Peak 37(17p12) 0 (0%) 352 0.056723 1 1.1832e-07 4.71e-05 3.9545e-26 1.92e-23 0.46276 1 0.66614 1 Del Peak 38(17p11.2) 0 (0%) 361 0.032293 1 1.3541e-06 0.000523 2.106e-19 9.94e-17 0.44467 1 0.74352 1 Del Peak 39(17q11.2) 0 (0%) 373 0.49741 1 5.1874e-06 0.00196 3.2412e-11 1.39e-08 0.13898 1 0.18062 1 Del Peak 40(17q21.2) 0 (0%) 367 0.1102 1 4.9424e-06 0.00187 1.6016e-15 7.24e-13 0.15176 1 0.071747 1 Del Peak 41(18q23) 0 (0%) 379 0.010211 1 0.0010906 0.356 9.7194e-15 4.33e-12 0.0052746 1 0.007937 1 Del Peak 42(19p13.3) 0 (0%) 332 0.009727 1 5.6951e-12 2.47e-09 1.5473e-49 7.58e-47 0.29617 1 0.0041323 1 Del Peak 43(19p12) 0 (0%) 414 0.062668 1 0.056819 1 4.2358e-08 1.72e-05 0.20492 1 0.40443 1 Del Peak 44(19q13.43) 0 (0%) 403 0.0013144 0.422 0.001165 0.376 6.1696e-16 2.8e-13 0.87073 1 0.027816 1 Del Peak 45(20p12.1) 0 (0%) 428 0.064089 1 0.0686 1 0.0007076 0.236 0.82891 1 0.15863 1 Del Peak 46(22q11.1) 0 (0%) 385 0.31851 1 6.0133e-05 0.0213 2.2332e-06 0.000855 0.015225 1 0.57913 1 Del Peak 47(22q12.1) 0 (0%) 381 0.12265 1 0.0011331 0.368 4.3452e-07 0.00017 0.069934 1 0.5279 1 Del Peak 48(22q13.31) 0 (0%) 350 0.010256 1 1.1277e-08 4.67e-06 5.4024e-19 2.52e-16 0.1793 1 0.78152 1 Del Peak 49(22q13.32) 0 (0%) 345 0.0072984 1 1.625e-07 6.42e-05 3.4897e-19 1.64e-16 0.054119 1 0.54051 1 Del Peak 50(Xp21.1) 0 (0%) 388 0.0035064 1 5.6946e-05 0.0204 2.9698e-14 1.32e-11 0.38131 1 0.10202 1