Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-BL-A0C8-01A-11D-A10R-02	TCGA-BL-A13I-01A-11D-A13U-02	TCGA-BL-A13J-01A-11D-A10R-02	TCGA-BL-A3JM-01A-12D-A21C-26	TCGA-BT-A0S7-01A-11D-A10R-02	TCGA-BT-A0YX-01A-11D-A10R-02	TCGA-BT-A20N-01A-11D-A14U-02	TCGA-BT-A20O-01A-21D-A14U-02	TCGA-BT-A20P-01A-11D-A14U-02	TCGA-BT-A20Q-01A-11D-A14U-02	TCGA-BT-A20R-01A-12D-A16N-02	TCGA-BT-A20T-01A-11D-A14U-02	TCGA-BT-A20U-01A-11D-A14U-02	TCGA-BT-A20W-01A-21D-A14U-02	TCGA-BT-A20X-01A-11D-A16N-02	TCGA-BT-A2LA-01A-11D-A18D-02	TCGA-BT-A2LB-01A-11D-A18D-02	TCGA-BT-A2LD-01A-12D-A210-26	TCGA-BT-A3PH-01A-11D-A221-26	TCGA-BT-A3PJ-01A-21D-A221-26	TCGA-BT-A3PK-01A-21D-A221-26	TCGA-C4-A0F0-01A-12D-A10R-02	TCGA-C4-A0F6-01A-11D-A10R-02	TCGA-CF-A1HR-01A-11D-A13U-02	TCGA-CF-A1HS-01A-11D-A13U-02	TCGA-CF-A27C-01A-11D-A16N-02	TCGA-CF-A3MF-01A-12D-A21C-26	TCGA-CF-A3MG-01A-11D-A210-26	TCGA-CF-A3MH-01A-11D-A210-26	TCGA-CF-A3MI-01A-11D-A210-26	TCGA-CU-A0YN-01A-21D-A10R-02	TCGA-CU-A0YO-01A-11D-A10R-02	TCGA-CU-A0YR-01A-12D-A10R-02	TCGA-CU-A3KJ-01A-11D-A21C-26	TCGA-CU-A3QU-01A-11D-A233-26	TCGA-CU-A3YL-01A-11D-A233-26	TCGA-DK-A1A3-01A-11D-A13U-02	TCGA-DK-A1A5-01A-11D-A13U-02	TCGA-DK-A1A7-01A-11D-A13U-02	TCGA-DK-A1AA-01A-11D-A13U-02	TCGA-DK-A1AB-01A-11D-A13U-02	TCGA-DK-A1AC-01A-11D-A13U-02	TCGA-DK-A1AD-01A-11D-A13U-02	TCGA-DK-A1AE-01A-11D-A13U-02	TCGA-DK-A1AG-01A-11D-A13U-02	TCGA-DK-A2HX-01A-12D-A18D-02	TCGA-DK-A2I1-01A-11D-A17R-02	TCGA-DK-A2I2-01A-11D-A17R-02	TCGA-DK-A2I6-01A-12D-A18D-02	TCGA-DK-A3IK-01A-32D-A21C-26	TCGA-DK-A3IL-01A-11D-A210-26	TCGA-DK-A3IN-01A-11D-A210-26	TCGA-DK-A3IQ-01A-31D-A210-26	TCGA-DK-A3IT-01A-31D-A210-26	TCGA-DK-A3IU-01A-11D-A210-26	TCGA-DK-A3IV-01A-22D-A21C-26	TCGA-DK-A3WX-01A-22D-A233-26	TCGA-DK-A3WY-01A-11D-A233-26	TCGA-DK-A3X1-01A-12D-A233-26	TCGA-DK-A3X2-01A-11D-A233-26	TCGA-E5-A2PC-01A-11D-A204-02	TCGA-E7-A3X6-01A-12D-A233-26	TCGA-E7-A3Y1-01A-11D-A233-26	TCGA-FD-A3B3-01A-12D-A204-02	TCGA-FD-A3B4-01A-12D-A204-02	TCGA-FD-A3B5-01A-11D-A210-26	TCGA-FD-A3B6-01A-21D-A210-26	TCGA-FD-A3B7-01A-31D-A210-26	TCGA-FD-A3B8-01A-31D-A210-26	TCGA-FD-A3N5-01A-11D-A21C-26	TCGA-FD-A3N6-01A-11D-A21C-26	TCGA-FD-A3NA-01A-11D-A21C-26	TCGA-FD-A3SJ-01A-12D-A233-26	TCGA-FD-A3SL-01A-21D-A233-26	TCGA-FD-A3SM-01A-11D-A233-26	TCGA-FD-A3SN-01A-12D-A233-26	TCGA-FD-A3SO-01A-11D-A233-26	TCGA-FD-A3SP-01A-31D-A233-26	TCGA-FD-A3SQ-01A-21D-A233-26	TCGA-FD-A3SR-01A-11D-A233-26	TCGA-FD-A3SS-01A-12D-A233-26	TCGA-FT-A3EE-01A-11D-A204-02	TCGA-G2-A2EC-01A-11D-A17R-02	TCGA-G2-A2EF-01A-12D-A18D-02	TCGA-G2-A2EJ-01A-11D-A17R-02	TCGA-G2-A2EK-01A-22D-A18D-02	TCGA-G2-A2EL-01A-12D-A18D-02	TCGA-G2-A2ES-01A-11D-A17R-02	TCGA-G2-A3IB-01A-11D-A210-26	TCGA-G2-A3IE-01A-11D-A210-26	TCGA-G2-A3VY-01A-11D-A233-26	TCGA-GC-A3BM-01A-11D-A23Q-26	TCGA-GC-A3I6-01A-11D-A210-26	TCGA-GC-A3OO-01A-11D-A233-26	TCGA-GC-A3RD-01A-12D-A233-26	TCGA-GC-A3WC-01A-31D-A233-26	TCGA-GD-A2C5-01A-12D-A17R-02	TCGA-GD-A3OP-01A-21D-A221-26	TCGA-GD-A3OQ-01A-32D-A221-26	TCGA-GD-A3OS-01A-12D-A221-26	TCGA-GV-A3JV-01A-11D-A221-26	TCGA-GV-A3JW-01A-11D-A210-26	TCGA-GV-A3JX-01A-11D-A210-26	TCGA-GV-A3JZ-01A-11D-A21C-26	TCGA-GV-A3QF-01A-31D-A233-26	TCGA-GV-A3QG-01A-11D-A221-26	TCGA-GV-A3QH-01A-11D-A221-26	TCGA-H4-A2HQ-01A-11D-A17R-02	TCGA-HQ-A2OE-01A-11D-A204-02	TCGA-K4-A3WS-01A-11D-A23Q-26	TCGA-K4-A3WV-01A-11D-A23Q-26	
Amplification Peak  1	1p34.2  	chr1:39396332-40714877(probes 250:275)        	chr1:40428006-40433921(probes 271:272)        	chr1:39479427-40890613(probes 251:277)      	0.024393	   0.024393		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	1	0	1	0	2	2	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	2	0	2	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	2	0	0	1	0	0	0	0	0	0	0	0	1	0	1	
Amplification Peak  2	1q23.3  	chr1:160624317-161190721(probes 1027:1052)  	chr1:160887451-161070225(probes 1034:1041)  	chr1:158067621-174178027(probes 966:1244) 	5.9744e-09	 5.9744e-09		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	2	0	2	1	0	0	2	0	0	0	1	1	0	0	0	1	1	1	2	2	1	0	0	0	1	0	0	0	0	1	0	0	2	2	0	0	1	1	2	0	0	2	2	0	0	0	0	1	2	2	2	0	0	1	2	0	0	0	2	1	1	1	1	0	1	0	0	1	0	0	0	0	2	0	1	0	1	0	0	2	0	1	0	2	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	1	1	1	1	2	2	1	0	2	1	2	0	
Amplification Peak  3	3p25.2  	chr3:11913848-12576749(probes 3374:3391)      	chr3:12037673-12181459(probes 3379:3380)      	chr3:6993569-17711296(probes 3307:3453)      	4.7178e-07	 4.7178e-07		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	2	0	1	0	0	0	2	0	0	0	0	0	0	2	0	1	1	1	2	0	0	0	0	1	0	0	2	1	0	1	0	0	2	0	0	1	1	1	2	0	0	2	2	0	0	1	0	0	2	0	0	2	0	0	0	0	0	0	1	2	0	0	0	0	0	1	1	0	0	0	0	0	2	2	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	2	1	0	0	1	0	0	0	0	0	1	2	2	0	1	1	1	0	0	1	0	1	
Amplification Peak  4	4q13.3  	chr4:68533744-78216278(probes 5264:5406)      	chr4:73630009-73651302(probes 5347:5348)      	chr4:73332097-75042107(probes 5346:5369)    	0.15832	    0.15832		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	2	0	0	0	0	2	0	0	0	0	0	0	0	0	1	
Amplification Peak  5	6p22.3  	chr6:17727193-23861197(probes 7841:7882)      	chr6:18898878-23785506(probes 7870:7881)      	chr6:11820586-24863098(probes 7718:7907)    	4.3804e-05	   0.012348		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	1	0	0	0	1	0	0	1	1	0	0	2	2	0	0	0	0	2	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	1	0	1	0	2	0	0	0	0	0	0	2	0	1	0	1	0	1	0	0	0	0	1	0	0	0	0	1	0	2	0	2	
Amplification Peak  6	6p22.3  	chr6:19262639-24823672(probes 7881:7904)      	chr6:19329930-23861198(probes 7882:7883)      	chr6:11820586-24863098(probes 7718:7907)    	0.00023486	  0.0039048		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	1	0	0	2	0	0	0	0	0	0	2	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	2	0	1	0	1	0	1	0	0	0	0	1	0	2	0	0	2	0	0	0	2	
Amplification Peak  7	7p11.2  	chr7:54743990-55726666(probes 9352:9375)      	chr7:54801843-55095530(probes 9357:9362)      	chr7:52223250-64075504(probes 9305:9410)    	1.2522e-06	 1.2522e-06		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	1	0	1	0	2	0	0	0	0	0	0	1	1	1	1	1	0	2	0	0	1	0	1	0	0	1	0	1	2	1	0	1	0	0	1	2	1	0	0	1	0	0	0	1	0	1	1	1	1	1	0	0	1	0	0	0	1	1	0	0	0	0	0	1	2	2	0	2	0	0	1	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	2	0	1	0	1	0	0	1	0	2	0	2	2	0	1	0	0	0	2	
Amplification Peak  8	8p11.23 	chr8:37098549-37944323(probes 10228:10273)    	chr8:37588240-37589461(probes 10261:10262)    	chr8:36028752-39675438(probes 10187:10331)  	0.00032268	 0.00032268		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	2	0	0	0	0	0	2	2	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0	1	1	0	2	0	0	0	1	2	0	2	0	0	0	0	0	1	0	2	2	0	1	0	2	0	2	0	0	0	2	1	2	0	0	0	0	0	0	0	2	
Amplification Peak  9	8q22.3  	chr8:100146645-103355705(probes 10922:10995)	chr8:102013118-102196067(probes 10961:10968)	chr8:98058315-107514570(probes 10893:11053)	1.5234e-05	 1.5234e-05		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	2	0	1	1	0	0	1	0	0	0	0	0	0	2	1	1	0	2	0	2	0	2	1	0	1	0	0	1	2	0	1	0	2	1	1	0	0	1	2	0	0	2	1	2	0	0	0	0	2	2	0	1	0	0	1	0	0	0	2	2	0	0	0	0	0	2	1	0	0	0	2	2	2	0	0	0	0	2	1	0	0	2	0	0	0	2	0	1	0	2	2	0	2	0	2	1	0	1	0	2	2	1	0	2	1	0	2	2	1	1	0	
Amplification Peak 10	10p14   	chr10:4082074-10859662(probes 12303:12352)    	chr10:8070939-8081931(probes 12330:12331)      	chr10:6133931-9922558(probes 12317:12346)    	0.036883	   0.036883		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	1	0	0	0	2	0	0	2	2	0	0	0	0	0	1	2	0	1	0	0	0	0	1	0	1	1	0	0	0	0	0	2	1	0	1	1	0	0	0	2	2	0	0	2	0	0	1	0	1	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	2	0	2	1	0	0	0	0	1	0	2	0	2	1	0	0	0	0	2	0	0	2	0	0	0	2	0	1	0	0	2	0	1	0	1	2	0	0	0	1	1	0	
Amplification Peak 11	11q13.3 	chr11:70102480-70428787(probes 13752:13771)  	chr11:70219906-70402506(probes 13759:13766)  	chr11:68279483-71281718(probes 13691:13791)	1.3703e-09	 1.3703e-09		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	2	1	0	0	0	0	0	0	0	2	0	0	0	0	1	2	0	0	1	2	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	2	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	0	0	1	0	2	0	1	0	0	2	2	1	0	1	1	0	1	2	0	0	2	
Amplification Peak 12	12q15   	chr12:69121869-70436774(probes 15085:15120)  	chr12:69183509-69479730(probes 15096:15101)  	chr12:68945934-73509949(probes 15080:15148)	4.6276e-06	 4.6276e-06		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	0	1	2	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	2	2	0	1	1	0	0	0	0	1	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	1	0	1	0	2	0	0	0	0	0	0	1	0	0	0	0	0	2	2	0	2	
Amplification Peak 13	16p13.2 	chr16:6480817-13296512(probes 17399:17475)    	chr16:8621585-9287725(probes 17421:17425)      	chr16:7668794-9966764(probes 17408:17431)    	0.051267	    0.16982		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	
Amplification Peak 14	16p12.1 	chr16:23852373-27102172(probes 17528:17566)  	chr16:24657583-24792887(probes 17537:17538)  	chr16:23465398-27102171(probes 17523:17565)	0.0063308	   0.029436		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	1	0	0	2	0	0	0	0	0	0	0	2	1	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	2	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	
Amplification Peak 15	17q11.2 	chr17:18777450-34943690(probes 18077:18267)  	chr17:30963456-31203334(probes 18232:18237)  	chr17:30963456-31286561(probes 18232:18242)	0.18649	    0.18649		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	2	0	0	0	0	2	1	1	0	0	0	0	0	0	1	2	0	0	0	0	1	2	0	1	1	0	0	0	0	1	0	0	2	0	0	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	1	0	0	2	1	0	2	1	1	0	1	
Amplification Peak 16	17q12   	chr17:37779620-38173911(probes 18317:18335)  	chr17:37897401-37900661(probes 18326:18327)  	chr17:37681232-38177006(probes 18310:18337)	0.0033837	  0.0033837		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	2	0	1	2	0	0	0	0	2	1	1	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	1	1	0	0	0	0	2	0	0	2	0	2	1	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	1	0	2	1	1	0	1	
Amplification Peak 17	19q12   	chr19:30021330-30821093(probes 19556:19587)  	chr19:30479134-30522387(probes 19573:19574)  	chr19:29216916-32990865(probes 19527:19631)	3.2885e-06	 0.00022487		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	0	2	1	0	0	0	0	0	1	0	2	1	2	0	0	0	1	1	0	1	0	1	1	0	0	2	0	0	2	0	1	2	0	2	0	1	0	2	0	0	2	0	0	2	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	2	1	0	0	0	0	0	2	0	1	0	1	0	0	0	0	0	1	2	0	0	0	1	0	0	0	0	0	1	2	0	2	2	0	1	1	0	1	0	
Amplification Peak 18	19q13.2 	chr19:37953039-41225744(probes 19734:19789)  	chr19:39279384-39348459(probes 19749:19752)  	chr19:38026423-41158370(probes 19735:19787)	0.00023921	   0.039847		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	0	2	1	0	0	2	0	0	1	0	2	1	2	0	0	0	1	1	0	2	0	1	1	0	0	0	0	1	1	0	1	0	2	2	0	1	0	2	0	0	2	0	0	2	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	2	0	1	0	2	0	0	0	0	0	0	2	0	0	0	2	0	0	0	0	1	1	1	0	1	1	0	1	1	0	1	0	
Amplification Peak 19	20q11.21	chr20:25328497-31106807(probes 20122:20144)  	chr20:25328498-30329932(probes 20123:20133)  	chr20:25328498-30674492(probes 20123:20136)	0.1404	     0.1404		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	1	2	1	0	0	0	1	1	1	0	0	0	0	0	0	1	0	0	0	1	2	0	2	0	1	1	0	1	1	0	1	1	0	0	0	1	1	0	0	1	1	0	0	1	0	1	1	1	2	1	0	0	1	2	1	0	2	1	0	0	0	0	0	0	1	0	0	0	0	2	0	1	0	0	0	0	1	1	0	1	1	2	1	1	0	0	0	0	2	2	2	1	1	0	1	0	0	2	1	1	1	2	1	0	1	2	2	1	2	
Amplification Peak 20	22q12.1 	chr22:1-27271918(probes 20709:20756)         	chr22:25346602-26296525(probes 20730:20739)  	chr22:25346602-26412431(probes 20730:20742)	0.12863	    0.12863		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	1	0	2	0	0	1	0	0	0	1	0	0	0	1	0	0	1	0	0	1	0	1	0	0	
Deletion Peak  1	2q22.1 	chr2:141719260-142051034(probes 2472:2505)	chr2:141918802-141936476(probes 2487:2488)	chr2:141689625-142154342(probes 2465:2511)	0.00057991	  0.0027953		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	1	1	0	0	0	0	0	0	1	0	0	1	1	0	0	1	1	0	1	0	1	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	1	0	0	0	0	2	0	1	0	0	0	0	0	0	1	0	0	0	2	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	
Deletion Peak  2	2q36.3 	chr2:213561821-243199373(probes 3076:3284)	chr2:226228053-226330746(probes 3177:3178)	chr2:209557515-243199373(probes 3033:3284)	1.5786e-06	 3.4229e-06		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	1	0	1	1	0	0	0	0	1	1	0	0	1	0	0	0	1	0	0	0	1	0	0	1	1	0	1	0	2	1	0	1	0	0	0	1	1	0	0	1	0	0	0	1	1	0	0	1	0	1	0	0	0	1	0	1	0	0	0	1	0	0	0	1	0	0	1	0	0	1	0	0	0	1	1	0	0	1	0	1	1	0	0	0	1	1	0	0	1	1	0	0	0	0	1	1	0	0	0	0	1	0	1	0	1	
Deletion Peak  3	3p12.3 	chr3:29492201-93921214(probes 3526:4030)    	chr3:74851549-75002284(probes 3817:3820)    	chr3:74851549-75024236(probes 3817:3823)    	0.15098	    0.15098		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	1	1	1	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	1	1	0	1	
Deletion Peak  4	4q22.1 	chr4:91529434-92226970(probes 5578:5603)    	chr4:91795806-91872297(probes 5591:5592)    	chr4:91529433-92315174(probes 5577:5605)    	0.0061473	   0.016605		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	1	1	1	0	0	0	0	1	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	1	0	0	1	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	1	
Deletion Peak  5	4q34.3 	chr4:155656891-191154276(probes 6130:6299)	chr4:180336313-182164889(probes 6246:6255)	chr4:179040609-182948619(probes 6244:6269)	0.041844	    0.18485		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	1	0	0	1	0	1	1	1	1	0	0	0	1	1	0	0	0	1	1	0	0	0	0	1	1	1	0	1	
Deletion Peak  6	5q12.1 	chr5:45373655-78981219(probes 6668:6908)    	chr5:59114477-59132728(probes 6788:6789)    	chr5:58901156-59587451(probes 6778:6802)    	0.017916	   0.017916		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	1	1	0	0	0	1	0	0	0	1	1	0	0	0	1	1	0	1	1	0	0	1	0	1	0	0	1	1	0	0	0	0	0	1	0	0	1	1	0	0	0	1	0	0	0	0	0	0	1	0	1	1	0	0	1	0	0	1	1	1	1	0	0	0	1	1	0	0	1	0	0	1	1	1	1	0	0	0	1	1	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	1	1	0	1	0	1	1	1	0	1	
Deletion Peak  7	6p25.3 	chr6:1-5266921(probes 7552:7616)                	chr6:1-1875640(probes 7552:7567)                	chr6:1-2054356(probes 7552:7570)                	0.1813	     0.1813		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	
Deletion Peak  8	6q21   	chr6:89342867-122609798(probes 8460:8629)  	chr6:108463916-116939576(probes 8549:8592)	chr6:106974674-119625836(probes 8531:8606)	0.047475	   0.047475		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	1	0	1	0	1	0	0	0	0	1	0	0	1	0	1	0	1	0	0	0	0	0	1	1	1	0	0	0	0	1	0	0	0	0	0	0	1	1	0	1	0	0	1	1	1	0	1	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	1	1	1	1	0	1	1	1	0	1	
Deletion Peak  9	8p22   	chr8:1-31636712(probes 9943:10095)             	chr8:16715659-17786984(probes 9997:10000)   	chr8:1-35338054(probes 9943:10157)             	4.8163e-06	 4.8163e-06		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	1	0	1	0	0	1	0	0	0	0	1	1	0	1	1	1	1	1	0	1	0	0	1	1	0	0	1	0	0	1	1	1	1	1	1	0	1	0	0	0	0	0	1	0	0	1	1	1	0	0	1	0	1	1	1	1	0	1	0	0	1	1	0	0	1	0	1	0	0	0	1	1	0	0	0	1	1	1	0	0	0	0	1	1	1	1	1	1	1	0	0	1	
Deletion Peak 10	9p21.3 	chr9:21964593-22024723(probes 11685:11696)  	chr9:21973950-21998310(probes 11690:11693)  	chr9:20952233-24116907(probes 11608:11770)  	1.6889e-52	 1.6889e-52		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	1	1	0	1	1	1	0	2	1	0	2	0	1	1	0	1	0	0	0	0	1	2	1	0	2	1	2	2	1	0	1	0	2	0	2	1	2	0	2	1	0	0	2	2	0	0	0	0	1	0	1	1	1	0	0	1	0	1	0	2	2	0	0	0	2	0	0	0	0	2	1	0	0	2	1	0	1	1	1	0	0	1	2	0	0	0	0	1	1	1	1	0	0	1	0	0	0	2	1	0	1	0	0	1	0	2	2	1	1	2	
Deletion Peak 11	12p13.1	chr12:4377550-20130606(probes 14460:14560)  	chr12:14209365-14667684(probes 14512:14515)	chr12:13510500-14974230(probes 14508:14518)	0.15098	    0.15098		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	
Deletion Peak 12	13q14.2	chr13:47328496-51676610(probes 15797:15844)	chr13:48909600-49102445(probes 15819:15824)	chr13:38597723-53512351(probes 15717:15865)	3.9646e-06	 3.9646e-06		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	1	0	0	1	0	0	0	1	1	0	0	1	1	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	2	0	1	0	1	0	0	1	1	1	0	1	0	0	1	1	0	1	1	0	0	1	0	0	0	1	1	1	0	0	0	0	1	0	0	1	0	0	1	0	0	1	0	0	0	1	2	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	1	0	0	0	1	1	0	0	0	0	0	1	0	0	
Deletion Peak 13	15q12  	chr15:1-43566404(probes 16946:17027)       	chr15:25931333-31170354(probes 16961:16973)	chr15:25931333-31815000(probes 16961:16976)	0.065318	   0.065318		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	1	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	1	0	1	0	1	1	1	0	0	
Amplification Peak  1 - CN values	1p34.2  	chr1:39396332-40714877(probes 250:275)        	chr1:40428006-40433921(probes 271:272)        	chr1:39479427-40890613(probes 251:277)      	0.024393	   0.024393		Actual Copy Change Given	-0.058438	-0.0070277	-0.026063	-0.0052977	-0.2306	-0.0069515	0.067604	0.0055883	0.0066642	-0.011121	1.1924	-0.024436	0.028984	0.39252	-0.10418	0.53834	-0.011665	0.30086	0.054337	1.2067	1.3589	0.10655	0	-0.2621	2.4518	0.28382	0	-0.019748	0.016032	-0.37496	0.14566	-0.07711	-0.37651	0.0084759	0.53332	-0.0093141	2.0907	0.01806	2.8716	0.08329	0.50699	0	0.056266	-0.032671	0.0038802	0.02681	0.48424	-0.32365	-0.090727	0.039619	0.1929	0.27269	-0.11997	-0.2123	0.11276	0.039349	0.12388	-0.0043168	-0.057446	1.0764	-0.2843	0.01529	-0.0026579	0	0.016892	1.7249	0.013724	0	0.022892	0.0086464	0.0050277	0.079593	0.51701	0.35091	0.0091289	-0.023875	0.016938	-0.0052444	-0.12966	0.25978	0.1926	-0.1015	-0.29125	0.012535	0.002892	0.040064	1.0383	-0.0083853	0.0015779	0.17056	-0.012188	0	-0.045784	0.1361	1.4071	0.0068276	6	0.0019569	0.00052927	0.52334	-0.23925	0.048039	0.0073675	-0.021954	0	-0.15312	-0.10264	0.023798	0.45885	-0.022696	0.50317	
Amplification Peak  2 - CN values	1q23.3  	chr1:160624317-161190721(probes 1027:1052)  	chr1:160887451-161070225(probes 1034:1041)  	chr1:158067621-174178027(probes 966:1244) 	5.9744e-09	 5.9744e-09		Actual Copy Change Given	3.0398	-0.0070277	5.1957	0.79098	0.18044	-0.0044651	1.424	0.16355	0.0066642	-0.0045998	0.34177	0.58971	0.028984	0.24773	0.20575	0.53834	0.38086	0.31942	3.0574	6	0.60318	0.10655	-0.04518	0.029082	0.76852	0.014761	0	-0.019748	0.016032	0.46575	0.0099735	-0.05684	2.0292	1.3221	-0.038087	-0.0093141	0.43356	0.46106	5.0727	0.051411	0.0085219	1.8929	5.492	-0.03273	0.0038802	-0.31191	0.089521	0.43411	1.3569	3.0624	1.3727	0.27269	-0.12675	0.37525	1.098	0	-0.08059	-0.0043168	2.3492	0.51148	0.58102	0.52387	0.86289	0	0.63417	0.24856	-0.18703	0.58139	0.022892	0.0086464	0.0050277	0.14324	3.403	0.030568	0.70769	-0.023875	0.5384	0.2269	0.037595	2.2496	0.1926	0.48489	-0.29125	1.4257	0.002892	0.033202	0.027616	1.1836e-06	0.0015779	-0.30339	0.6973	0	-0.045784	0.1361	0.047363	0.40311	0.74447	0.29891	0.00052927	0.49809	0.77096	0.63916	0.66558	4.3091	1.2584	0.83081	-0.36204	4.2051	0.50853	0.98298	0.023688	
Amplification Peak  3 - CN values	3p25.2  	chr3:11913848-12576749(probes 3374:3391)      	chr3:12037673-12181459(probes 3379:3380)      	chr3:6993569-17711296(probes 3307:3453)      	4.7178e-07	 4.7178e-07		Actual Copy Change Given	6	0.22608	0.41601	-0.057175	-0.076086	0.016909	1.2127	0.0033004	-0.0026768	0.010246	0.05328	-0.056974	0.01933	0.94755	-0.39024	0.56096	0.4071	0.85271	0.94441	-0.0067638	0.09178	-0.19764	-0.032683	0.63167	-0.22591	-0.0053525	1.1184	0.56241	0.0081061	0.46741	-0.25576	0.15225	4.8791	-0.54883	0.057048	0.73269	0.35423	0.44723	1.9268	0.18737	-0.54457	1.7826	1.2807	0.050772	0.0548	0.34353	0.001744	-0.24792	2.3606	0.094328	0.010672	6	0.042756	0.15305	0.19965	0.030696	-0.2831	0.036366	0.35225	1.1105	-0.43728	-0.025424	0.26461	-0.012348	-0.19613	0.37485	0.647	0.0076227	0.025376	-0.49879	0.0076616	-0.0055645	2.6214	4.1962	0	-0.72118	-0.0023139	0.016207	0.034194	-0.13953	-0.049088	1.0357	0.0059035	0.20831	-0.60577	0.001907	0.027673	0.53568	-0.89856	1.4737	0.57018	-0.32554	-0.14493	0.39174	0.0094215	-0.39731	-0.0018302	0.2954	0.030583	0.55614	6	4.2707	0	0.54824	0.35432	0.7318	0.087001	-0.26918	0.59684	0.21874	0.51867	
Amplification Peak  4 - CN values	4q13.3  	chr4:68533744-78216278(probes 5264:5406)      	chr4:73630009-73651302(probes 5347:5348)      	chr4:73332097-75042107(probes 5346:5369)    	0.15832	    0.15832		Actual Copy Change Given	-0.022468	-0.023247	-0.091094	-0.027911	-0.030666	-0.0086807	0.22121	-0.0066146	-0.0079502	-0.021188	-0.34081	-0.0058623	-0.00051404	-0.018776	0.098959	-0.082996	-0.39882	0.75847	-0.40124	-0.019067	1.8321	-0.38536	0.34051	-0.27881	-0.085515	0.012156	0.0070737	-0.29216	0.023206	-0.17223	-0.35514	-0.2783	-0.043895	0.49604	0	-0.015045	0	0.43883	3.9186	-0.047489	0.0028096	-0.087805	-0.24771	0.0080521	0.04026	-0.20533	-0.18941	0.30378	0.51248	0.015109	0	-0.014891	0.025441	-0.56237	-0.015669	0.034526	-0.1313	-0.017592	0.086141	1.0827	-0.076688	0.01226	-0.00052167	-0.16974	-0.029184	-0.2822	-0.313	-0.26995	-0.011117	-0.048429	-0.017502	0.27654	-0.36148	-0.53601	-0.010057	0	-0.5758	-0.058259	0.0041326	0.46278	-0.088777	-0.074567	0.014054	-0.4538	0.45371	-0.018003	0	-0.0073506	-0.89213	-0.28942	0.48173	-0.77491	-0.054542	-0.27022	0.033823	0.8564	3.506	0.0083614	-0.015881	-0.043646	-0.15331	1.7377	-0.018619	0	-0.0032534	-0.01804	-0.423	-0.62681	-0.24684	-0.25774	0.58864	
Amplification Peak  5 - CN values	6p22.3  	chr6:17727193-23861197(probes 7841:7882)      	chr6:18898878-23785506(probes 7870:7881)      	chr6:11820586-24863098(probes 7718:7907)    	4.3804e-05	   0.012348		Actual Copy Change Given	-0.022411	0.0024964	0.0061649	-0.0071041	0.1254	0	-0.19686	-0.001778	-0.0020132	-0.0087126	1.1865	-0.012851	0.068424	0.29319	-0.39952	0.098212	-0.39021	0.069426	-0.40774	2.2885	0	0.13821	-0.080372	-0.11634	1.2158	0	-0.00045761	-0.29319	-0.029076	0.052352	0.78981	0	-0.029354	-0.00085122	0.58414	0.00089208	-0.39866	0.43754	0.60811	-0.049603	-0.56078	6	6	-0.09223	-0.060112	-0.29549	-0.38127	0.91752	0.19712	0.043229	0.52642	0.26173	0.0023507	-0.28705	0.74466	-0.0096599	0.048297	0.014277	0	-0.6358	-0.76661	0.0076514	0.003246	1.8934	0.00042155	0.13634	-0.29753	0.28559	0.017731	-0.49376	0.010532	-0.36793	6	-0.27097	-0.0010764	-0.72652	0.011418	0.44294	0.19728	0.72765	0.10173	0.47576	0.098127	3.054	0	-0.011713	0.016633	0.012541	0.023633	-0.016739	4.2035	0.10746	0.50209	0.13909	0.53304	0.00103	0.35533	-0.14129	0.012992	-0.014998	0.0021824	0.69448	0.082452	-1.1689	-0.027779	-0.022054	0.38549	-0.26682	0.96833	0.19608	1.1089	
Amplification Peak  6 - CN values	6p22.3  	chr6:19262639-24823672(probes 7881:7904)      	chr6:19329930-23861198(probes 7882:7883)      	chr6:11820586-24863098(probes 7718:7907)    	0.00023486	  0.0039048		Actual Copy Change Given	-0.022411	0.0024964	-0.033762	-0.0071041	0.1254	0	-0.19686	-0.001778	-0.0020132	-0.0087126	1.4604	-0.012851	0.068424	0.0043423	-0.39952	1.2834	-0.39021	0.037826	-0.40774	-0.047019	0	0.13821	-0.080372	-0.11634	-0.026091	0	-0.00045761	-0.29319	-0.029076	0.052352	0.37153	0	-0.029354	-0.00085122	0.58414	0.00089208	-0.04491	0.43754	0.60811	-0.049603	-0.56078	6	-0.12797	-0.09223	-0.060112	-0.29549	-0.38127	-0.38729	1.1068	0.043229	0.52642	0.26173	0.0023507	-0.28705	0.74466	-0.0096599	0.048297	0.014277	0	-0.6358	-0.30472	0.0076514	0.003246	0.053273	0.00042155	0.13634	1.8827	0.28559	0.017731	-0.54524	0.010532	0.015581	1.5451	-0.27097	-0.0010764	-0.72652	0.011418	0.19117	-0.40439	0.72765	0.10173	0.47576	0.098127	0.036153	0	-0.011713	0.016633	0.012541	0.023633	-0.016739	5.2796	0.10746	0.50209	0.13909	0.53304	0.00103	0.35533	-0.14129	0.012992	-0.014998	0.0021824	0.69448	0.082452	4.6723	-0.027779	-0.022054	6	-0.26682	-0.33926	0.19608	2.6316	
Amplification Peak  7 - CN values	7p11.2  	chr7:54743990-55726666(probes 9352:9375)      	chr7:54801843-55095530(probes 9357:9362)      	chr7:52223250-64075504(probes 9305:9410)    	1.2522e-06	 1.2522e-06		Actual Copy Change Given	0.70531	0.013688	0.41077	-0.017729	0.51348	0.012224	1.1579	0.027365	-0.004026	0.00061194	0	0.01307	0.026678	0.39374	0.31219	0.40092	0.51278	0.57556	0.045093	6	0.13909	-0.085181	0.89834	-0.25827	0.4346	-0.0024022	-0.010749	0.53681	0	0.44605	6	0.45304	-0.032827	0.50767	0.054157	0.032458	0.30363	2.5807	0.51993	0.050154	-0.0033647	0.49028	-0.086271	0.040899	0.022897	0.49711	0.12435	0.46336	0.76819	0.62791	0.48823	0.65024	-0.0084623	0.050598	0.3055	-0.0065064	0.00017767	0.026807	0.35428	0.51981	0.10329	0.0080681	0.11956	0.21795	-0.023102	0.5624	6	3.3134	0.008725	6	0.001802	-0.034396	0.50933	-0.25328	0.0019384	0.028193	0.00021135	0.090992	0.20814	0.49243	0.12297	1.574	0.0061869	0.021471	0.014573	0.0029043	-0.03072	0.015886	0.023351	0.022561	0.015419	0.25553	0.99438	-0.045784	0.47892	-0.027632	0.41929	0.0045299	-0.018347	0.51026	-0.0051753	6	0.013155	0.93384	6	-0.22449	0.43289	0.039336	0.12619	-0.012867	0.99492	
Amplification Peak  8 - CN values	8p11.23 	chr8:37098549-37944323(probes 10228:10273)    	chr8:37588240-37589461(probes 10261:10262)    	chr8:36028752-39675438(probes 10187:10331)  	0.00032268	 0.00032268		Actual Copy Change Given	-0.35579	0.014303	0.39493	0.71958	-0.089241	0.0016297	0.38475	-0.0041376	0	0.0075254	-0.36528	-0.037613	0	-0.63086	-0.042258	-0.042223	-0.24427	0.83599	0.065758	-0.41378	-0.12878	-0.64274	0.94532	0.016917	-0.076636	0.1967	0.014692	0.4037	-0.010794	-0.84811	-0.3077	-0.004735	-0.40537	-0.57739	0.40668	-0.0048908	-0.38442	0.46258	-0.15597	0.039781	0.0091999	-0.59699	1.3516	0	0.027237	-0.3156	0.18222	-0.04496	2.1958	1.0941	-0.55527	-0.36898	0.13659	-0.6155	1.3706	-0.55073	0.04557	0.002013	-0.0071013	1.6541	0.10999	0.10461	0.079065	0.012669	-0.010084	-0.30979	-0.6524	1.4355	0.041077	-0.52803	-0.0034596	0.69005	0.72768	-0.23076	2.6043	-0.72746	-0.5785	-0.26313	0.6208	3.3032	0.246	1.0544	0.0025418	-0.45084	0.014855	-0.52528	0.073578	0.50853	-0.0047482	1.5318	4.6019	0.20991	0.49769	0.028671	1.2547	-0.40068	1.3566	-0.14735	-0.24043	-0.013415	1.8509	0.55931	5.9861	-0.073506	-0.027183	-0.48753	-0.66547	-1.0445	0.28597	-0.29088	6	
Amplification Peak  9 - CN values	8q22.3  	chr8:100146645-103355705(probes 10922:10995)	chr8:102013118-102196067(probes 10961:10968)	chr8:98058315-107514570(probes 10893:11053)	1.5234e-05	 1.5234e-05		Actual Copy Change Given	3.2203	-0.0076872	0.78603	0.71958	-0.054044	0.0016297	0.38475	-0.0041376	0	0.0075254	0.005833	0.14509	0	1.4009	0.40526	0.44101	0.22889	4.3845	0.065758	1.1819	-0.12878	1.6376	0.46246	0.016917	0.70526	0.21939	0.014692	0.4037	0.9081	0.027187	0.30623	-0.004735	4.5974	0.52671	0.32485	-0.0048908	0.20165	0.44258	4.1039	0.078915	0.0091999	1.111	0.58867	2.2862	0.027237	0.055632	0.23482	0.18507	2.3327	2.6005	-0.52429	0.30268	0.1394	0.19051	0.3256	-0.025631	0.21514	0.002013	5.642	1.6541	0.10999	0.01963	0.079065	0.012669	-0.010084	0.92599	0.48131	0.18881	0.041077	-0.013735	1.6508	5.1191	4.7499	-0.23076	0.0038059	0.0077234	-0.014398	1.6577	0.89843	-0.065077	-0.065284	1.0181	0.0025418	-0.017677	0.014855	1.2957	0.054149	0.50853	0.015631	1.7031	1.6876	0.20991	0.97859	0.028671	1.3386	0.35934	0.012321	0.47108	0.19223	1.6902	1.8509	0.61928	0.12463	1.1281	0.38393	-0.0053348	0.95345	1.2251	0.83262	0.58238	0.011766	
Amplification Peak 10 - CN values	10p14   	chr10:4082074-10859662(probes 12303:12352)    	chr10:8070939-8081931(probes 12330:12331)      	chr10:6133931-9922558(probes 12317:12346)    	0.036883	   0.036883		Actual Copy Change Given	0.68036	0.020938	0.75387	-0.012822	0.10427	0.0051083	1.09	-0.004384	0.0091359	2.6138	1.1043	0.011562	-0.20325	0.2958	0.024953	-0.64525	0.42828	1.2391	0	0.32604	0.076513	-0.43921	0.19892	0.0070866	0.48236	-0.21954	0.55842	0.56595	-0.030096	0.083421	0.22698	-0.023608	-0.37854	0.97108	0.85318	0.0051951	0.63382	0.86365	-0.0066452	-0.076111	-0.0054496	2.2798	1.9673	0.053496	-0.042169	3.9487	-0.16224	-0.32851	0.53417	-0.048077	0.55248	0.59286	-0.04621	0.014106	-0.16223	0.89459	-0.052095	-0.01213	0.75871	-0.050188	-0.33431	0.0059543	0.0055862	0.21287	-0.61613	0.080089	0.33526	-0.16861	-0.012888	1.5499	-0.002992	1.0292	0.6721	0.031914	-0.0022407	-0.019017	-0.051765	0.30293	0	6	0.13273	1.0314	0.35327	0.05605	-8.6651e-05	0.060905	-0.98755	1.1072	-0.16124	0.14606	1.9948	-0.87323	-0.041175	0	0.9869	-0.030171	0.35799	0	-0.0063947	1.1361	0	0.63923	0.075665	0.56735	1.1776	-0.001015	0.11623	0.054655	0.6501	0.68201	-0.026353	
Amplification Peak 11 - CN values	11q13.3 	chr11:70102480-70428787(probes 13752:13771)  	chr11:70219906-70402506(probes 13759:13766)  	chr11:68279483-71281718(probes 13691:13791)	1.3703e-09	 1.3703e-09		Actual Copy Change Given	-0.22021	-0.011792	1.5138	-0.014414	0.17073	-0.010556	-0.018035	0.00046231	0.0010603	0.0021104	3.6e-05	0.0023119	0.0038452	-0.051055	0.48039	0.50894	0	-0.005743	3.7075	0.79634	-0.0635	0	0.11627	-0.0018086	0.19059	0.015477	-0.56943	1.7059	-0.033485	0.012809	0.28557	0.15761	0.61291	6	-0.054431	-0.023022	0.34728	6	-0.12426	0.057756	0.0092946	-0.45059	-0.54427	0.051658	0.01757	0.017231	0.00040641	0.18183	0.38708	-0.0076714	0.95302	-0.32983	-0.1439	0.074352	0.044363	0.027476	0.11444	-0.0026672	0.40346	0.49376	0.105	0.0033382	0.015736	0.061797	0	1.2532	0.41806	0.59485	-0.0082467	0.0097687	-0.012568	0.25136	0.63873	-0.27111	0.00053933	0.0046395	0.0057994	0.20763	-0.032722	0.0020207	0.083488	-0.095569	0.012899	-0.0065756	0.0064877	0	-0.0064147	5.3427	6	0.72306	-0.071407	0.046441	0.44151	-0.045527	1.623	0.0010735	0.61548	-0.14354	0.030386	6	6	0.60599	-0.032612	0.51529	0.39647	0.028802	0.38087	2.8371	0.057015	0.18315	5.2834	
Amplification Peak 12 - CN values	12q15   	chr12:69121869-70436774(probes 15085:15120)  	chr12:69183509-69479730(probes 15096:15101)  	chr12:68945934-73509949(probes 15080:15148)	4.6276e-06	 4.6276e-06		Actual Copy Change Given	0.3801	-0.0033875	0.26982	0.76866	6	-0.003419	-0.0083646	0.024827	0.90475	0.083561	0.3628	0.0092951	0.00048951	0	0.22267	0.0097133	0.23921	-0.23518	-0.04449	0.006609	0.27759	-0.37008	6	0.033847	0	0.013772	1.2466	0.27048	0.94977	1.3846	-0.33902	0.57853	0.71515	-0.062573	-0.44742	-0.0095865	0.29826	0.43153	6	-0.0064718	0.0024102	0.41557	0.8186	-0.0044868	-0.021665	0.044196	0.19179	-0.041663	-0.27994	0.0022246	-0.010826	-0.0069758	0.021471	0.085477	-0.021431	-0.12518	0.10096	-0.0020374	-0.023659	-0.046531	-0.30321	0	-0.0045708	0.050537	-0.00067595	0.15032	-0.35786	-0.054749	0.038809	0	0.0084099	-0.012665	-0.037453	-0.25967	0.0071576	0.012788	-0.56103	0	-0.19616	-0.0026295	-0.66448	-0.078112	-0.0067843	0.47454	-0.00077993	6	0.11155	0.012505	0.0056581	0.024584	0.59013	0.10102	0.46907	-0.047581	6	0	-0.0192	-0.00043089	0	0	0.15864	0.69547	-0.0077206	-0.59759	0.0018925	0.0053765	0.1765	5.1985	1.1158	0	1.5488	
Amplification Peak 13 - CN values	16p13.2 	chr16:6480817-13296512(probes 17399:17475)    	chr16:8621585-9287725(probes 17421:17425)      	chr16:7668794-9966764(probes 17408:17431)    	0.051267	    0.16982		Actual Copy Change Given	-0.15936	0.0070419	-0.4219	-0.0089805	0.08772	0.01981	-0.2999	-0.0033834	0.0035876	0.01126	-0.38292	0.039856	-0.031654	-0.2196	0.20175	0.52563	-0.36703	-0.11908	-0.859	-0.40034	-0.088539	0.026453	0.04448	-0.028589	-0.33501	-0.014765	-0.021883	0.025626	0.0091518	-0.26102	-0.27271	-0.018614	1.0994	-0.55217	1.9813	0.010477	-0.37675	0.001715	-0.56558	0.17489	0.016687	-0.50238	0.083493	0.12127	0.030325	-0.41032	-0.044219	0.14866	-0.61056	0.14883	0.47244	5.951	-0.010973	-0.16374	-0.04149	0.98444	-0.25962	-0.01089	0.32856	-0.68577	0.13176	-0.0091109	-0.0065311	-0.16765	0.0013497	-0.094574	-0.19033	-0.027505	-0.027145	-0.01188	-0.0064058	4.6616	0.16782	-0.022185	-0.0027806	-0.0025502	0.018494	-0.21922	-0.018917	4.7241	-0.064245	0.42289	-0.047102	-0.44378	0.00047477	0.0038894	-0.013723	0.0054655	-0.024185	0.93262	0.034019	0.047484	0.44964	-0.046694	-0.026613	-0.029123	-0.037919	-0.15328	-0.016934	-0.033639	0.26201	-0.24751	-0.84801	0.4429	-0.039017	0.00023349	-0.22421	0.038955	0.49865	-0.28387	-0.019542	
Amplification Peak 14 - CN values	16p12.1 	chr16:23852373-27102172(probes 17528:17566)  	chr16:24657583-24792887(probes 17537:17538)  	chr16:23465398-27102171(probes 17523:17565)	0.0063308	   0.029436		Actual Copy Change Given	-0.15936	0.0070419	1.924	-0.0089805	0.08772	0.0091494	-0.25935	-0.0033834	0.0035876	0.01126	0.29243	0.039856	-0.031654	0.033501	0.20175	1.0657	0.013536	0.40112	0.0053343	-0.40034	-0.088539	0.026453	0.04448	-0.028589	-0.33501	-0.014765	-0.021883	0.025626	0.0091518	-0.26102	0.39689	-0.018614	-0.25818	-0.46057	1.5027	0.010477	-0.37675	0.001715	0.39879	0.11796	0.016687	5.6126	-0.46639	0.069666	0.030325	-0.41032	0.038385	0.14866	-0.055596	1.1372	0.47244	-0.090746	-0.010973	-0.16374	-0.04149	1.8058	-0.25962	-0.01089	0.32856	-0.68577	0.13176	-0.0091109	-0.0065311	-0.16765	0.0013497	-0.094574	0.56529	-0.027505	-0.027145	-0.026268	-0.0064058	0.3063	0.61069	-0.022185	-0.0027806	-0.0025502	0.018494	-0.21922	-0.018917	5.7933	-0.064245	0.42289	-0.047102	0.52233	0.00047477	0.0038894	-0.013723	0.0054655	-0.024185	0.13501	0.034019	0.047484	0.44964	-0.046694	-0.026613	-0.029123	-0.072723	-0.15328	-0.016934	-0.038672	0.26201	6	-0.84801	0.95666	-0.039017	0.00023349	-0.22421	0.038955	-0.77778	0.23851	-0.019542	
Amplification Peak 15 - CN values	17q11.2 	chr17:18777450-34943690(probes 18077:18267)  	chr17:30963456-31203334(probes 18232:18237)  	chr17:30963456-31286561(probes 18232:18242)	0.18649	    0.18649		Actual Copy Change Given	0.10354	0.017772	0.3257	1.4202	0.27056	-0.0010627	-0.4831	0.0059096	0.92791	0.63261	0.32888	-0.026147	0.10435	0.1282	-0.098632	-0.023851	0.0096987	0.41092	1.2883	0.0051725	-0.20035	0.10799	0.086818	0.70664	6	0.017877	0.52286	0.3095	-0.021757	0.13269	-0.036003	-0.20751	0.32172	0.011933	0.066446	1.409	-0.046827	0	6	-0.07426	-0.56379	-0.107	0.67288	-0.11797	-0.075879	0.083575	0.15677	0.29209	-0.57708	0.3833	-0.04789	-0.089227	0.027387	-0.27388	-0.11666	-0.012891	0.13714	0.04524	0.34867	0.54982	0.14335	-0.011442	0.0015967	0.01897	0.020683	0.23666	0.27997	0.17777	0.017698	0.56366	0.0043779	0.30928	0.60075	0.039855	0.00057401	-0.73703	0.04934	0.34722	0.3047	0.001672	-0.23067	0.44644	0.091933	-0.46907	-0.01077	0.0058276	0.0028633	-0.0038532	-0.017284	0.089917	0.58634	0.063929	-0.037591	0.01419	0	0.0035315	1.5293	0.26884	0.001772	-0.0061069	0.32293	0.15369	0.041358	0.99457	0.79453	0	0.9489	0.35016	0.67664	0.23724	0.45216	
Amplification Peak 16 - CN values	17q12   	chr17:37779620-38173911(probes 18317:18335)  	chr17:37897401-37900661(probes 18326:18327)  	chr17:37681232-38177006(probes 18310:18337)	0.0033837	  0.0033837		Actual Copy Change Given	1.3502	0.017772	0.3257	1.4202	0.27056	-0.0010627	-0.4831	0.0059096	0.92791	0.63261	0.32888	-0.026147	0.10435	0.1282	-0.098632	-0.5639	0.0096987	0.41092	0.077151	0.0051725	0.8804	0.10799	0.086818	0.37601	-0.35787	0.017877	0.52286	0.3095	-0.021757	0.13269	-0.036003	-0.20751	6	0.011933	0.066446	1.409	-0.046827	6	0.73757	-0.07426	0.008591	-0.05794	0.67288	-0.11797	-0.075879	0.083575	0.055409	0.1569	6	-0.073738	-0.04789	-0.089227	0.027387	-0.27388	-0.11666	-0.012891	0.13714	0.04524	0.34867	0.54982	0.14335	-0.011442	0.0015967	0.01897	0.020683	0.23666	0.06737	0.17777	0.017698	0.016407	0.0043779	0.30928	0.60075	-0.012776	0.00057401	-0.73703	0.04934	0.34722	0.3047	0.001672	-0.23067	0.44644	0.091933	0.063566	-0.01077	0.0058276	0.0028633	-0.0038532	-0.017284	0.089917	-0.026497	0.063929	-0.037591	0.01419	0	0.0035315	-0.043134	0.26884	0.001772	-0.0061069	0.32293	-0.52671	0.041358	3.0271	0.79453	0	6	0.35016	0.67664	0.23724	0.45216	
Amplification Peak 17 - CN values	19q12   	chr19:30021330-30821093(probes 19556:19587)  	chr19:30479134-30522387(probes 19573:19574)  	chr19:29216916-32990865(probes 19527:19631)	3.2885e-06	 0.00022487		Actual Copy Change Given	-0.097432	0.0024032	0.32401	0.63907	-0.056687	-0.0034741	0.94037	0.3454	-0.006789	-0.018627	0.058912	0	-0.039604	0.63999	0.16411	2.9137	0.30998	6	-0.40279	-0.024652	-0.15103	0.33898	0.85449	0.04915	0.41784	-0.015538	0.50679	0.37281	-0.032582	-0.051942	1.2726	-0.031672	-0.20509	0.95134	0.049417	0.73801	2.182	-0.0066689	6	-0.068849	0.5457	-0.26086	4.3587	-0.077049	-0.061836	1.0853	0.018278	-0.13015	3.9968	0.0047796	0.44742	-0.090636	-0.13608	-0.22908	-0.015895	0.01184	0.068574	0.017821	0.3951	-0.069847	0.11417	-0.025617	0.0072863	0.77756	0.015471	0.070082	0.024417	-0.025624	0.81745	-0.0011936	-0.0054219	0	1.8193	0.60164	0.007818	0.03328	-0.59475	-0.047579	-0.023163	1.3271	0.20983	0.41315	-0.097616	0.40962	-0.029919	0.015438	-0.068072	-0.03839	-0.06079	0.48516	4.9451	0.026819	-0.033593	-0.0013935	0.43879	-0.027275	0.24478	0.25062	-0.0054608	-0.065314	0.4529	4.8311	0.090948	5.3824	1.8187	0.015066	0.56044	0.71003	0.14194	0.79033	-0.029741	
Amplification Peak 18 - CN values	19q13.2 	chr19:37953039-41225744(probes 19734:19789)  	chr19:39279384-39348459(probes 19749:19752)  	chr19:38026423-41158370(probes 19735:19787)	0.00023921	   0.039847		Actual Copy Change Given	-0.097432	0.0024032	0.32401	0.63907	-0.056687	-0.0034741	0.94037	0.3454	-0.006789	-0.018627	3.6577	0	-0.039604	0.5578	0.16411	4.1404	0.30998	2.2661	-0.40279	-0.4261	-0.15103	0.33898	0.85449	0.058984	1.9752	-0.015538	0.50679	0.37281	-0.032582	-0.051942	-0.28738	-0.031672	0.31436	0.53925	0.049417	0.73801	-0.43382	3.5735	6	-0.068849	0.5457	-0.09446	3.5099	-0.077049	-0.061836	1.7183	0.083645	-0.13015	6	0.0047796	0.44742	-0.090636	-0.13608	-0.31159	-0.015895	0.01184	0.068574	0.017821	0.3951	-0.084005	0.11417	-0.025617	0.0072863	0.11113	0.015471	0.070082	0.024417	-0.025624	0.051226	-0.0011936	-0.0054219	0	3.4312	1.1745	0.007818	0.03328	-0.50628	-0.047579	-0.023163	2.2576	0.20983	0.41315	-0.097616	0.95929	-0.029919	0.015438	-0.068072	-0.03839	-0.06079	-0.4516	1.0739	0.026819	-0.033593	-0.0013935	1.045	-0.027275	0.24478	0.25062	-0.0054608	0.60263	0.4529	0.54038	0.090948	0.88638	0.75312	0.015066	0.56044	0.71003	0.14194	0.79033	-0.011643	
Amplification Peak 19 - CN values	20q11.21	chr20:25328497-31106807(probes 20122:20144)  	chr20:25328498-30329932(probes 20123:20133)  	chr20:25328498-30674492(probes 20123:20136)	0.1404	     0.1404		Actual Copy Change Given	0.33134	-0.026446	0.385	1.4994	0.49054	0.016087	0.044965	-0.0049276	0.88389	0.65354	0.35579	0.18099	-0.0081545	0.023634	0.22214	0.011871	0.016342	0.36475	-0.03483	-0.018057	0.10799	0.61566	1.5769	0.17684	1.1213	-0.0058331	0.54119	0.56938	-0.013082	0.42732	0.36371	0.29769	0.35037	0.67732	0.041067	0	-0.38918	0.44776	0.85261	0.16356	0.01614	0.49381	0.46311	0.070975	0.033971	0.36114	-0.18459	0.74455	0.43665	0.86127	1.5124	0.31077	0.22936	0.14219	0.4596	3.0241	0.57214	0.0091146	1.1637	0.54576	0.15489	-0.041394	-0.0013363	0.13364	-0.00089246	0.26216	0.35297	0.25695	0.026017	0.22228	-4.2338e-05	1.1936	0.2832	0.63944	-0.0048759	0.089021	0.0047427	0.21621	0.48891	0.40541	0.26754	0.46915	0.56873	0.93537	0.5436	0.55344	-0.019082	0.041359	-0.004869	0.055062	2.8036	1.3289	1.0103	0.38618	0.51034	-0.020322	0.41204	0.13988	0.019141	5.2385	0.52022	0.66706	0.87798	0.94637	0.37162	0.18732	0.59432	1.1731	1.7525	0.69911	1.4991	
Amplification Peak 20 - CN values	22q12.1 	chr22:1-27271918(probes 20709:20756)         	chr22:25346602-26296525(probes 20730:20739)  	chr22:25346602-26412431(probes 20730:20742)	0.12863	    0.12863		Actual Copy Change Given	0.17844	0.0093838	3.7418	-0.0078311	-0.30405	0.0095957	0.011552	0.0030693	0.0059056	-0.0050599	-0.17785	0.027016	0.031294	0.17907	0.031142	-0.039201	0.21986	0.0077194	0.033094	0.38785	0.0069348	-0.41216	1.628	-0.024274	-0.031269	0.0031956	1.0658	-0.012305	0.011068	-0.2521	-0.33654	-0.054484	-0.019852	-0.55029	-0.93311	-0.023598	-0.076927	0.0047842	-0.62971	-0.035576	-0.028032	0.043984	0.58961	0.13594	-0.05757	-0.29629	-0.090059	-0.33292	0.762	0.2715	-0.0682	1.5282	-0.36816	-0.24721	0.098744	-0.59973	0.11258	0	-0.044272	-0.69338	-0.3223	-0.020548	0.017622	-0.17376	-0.60793	-0.29694	6	0.13402	0	-0.49026	-0.0025044	-0.01487	-0.2013	0.23706	-0.0046427	0.77754	-0.5446	-0.02442	-0.019062	-0.4828	-0.10852	-0.11288	0.15782	1.3467	0.044058	0.007158	-0.030472	0.42281	-0.053042	4.2302	-0.057729	0.016039	0.41797	0.10001	0.15975	0.0025471	0.80223	-0.1529	-0.0099224	-0.014169	0.46024	-0.6363	-0.85798	0.37086	-0.038959	-0.0012942	0.68111	-0.3534	0.49902	-0.11456	-0.021976	
Deletion Peak  1 - CN values	2q22.1 	chr2:141719260-142051034(probes 2472:2505)	chr2:141918802-141936476(probes 2487:2488)	chr2:141689625-142154342(probes 2465:2511)	0.00057991	  0.0027953		Actual Copy Change Given	0.061752	-0.43976	-0.027668	-0.012913	-0.070361	0.0088109	0.2793	-0.0031811	-0.90545	0.0014125	-0.026898	-0.17413	-0.0098807	-0.10649	-0.84285	-0.58189	0.40212	0.13191	-0.84389	-0.43671	0.053713	-0.13356	0.3737	0.036776	2.1051	0.0036003	-0.56524	-0.11375	0.009225	-0.36414	-0.32944	0.03585	0.30386	-0.90145	-0.30912	0.00026409	-0.7462	7.3578e-05	-0.3536	0.00926	0	-0.0083768	0.19997	0.29167	2.5043e-05	-0.64477	-0.44364	0.26215	0.16854	-0.40676	0.019601	0.26001	0.0093478	0.082986	-0.16221	-0.48507	-0.082586	0.0007513	-0.021064	-0.67175	-0.8327	0.027053	-0.014147	-0.053399	0.0027984	-0.70306	0	-0.11893	-0.0017859	-0.0052183	-1.5	-0.14941	-0.37096	0.053759	0.00196	0.019958	0	-0.017289	0.17756	-0.44243	-0.0052654	0	0	-1.4311	-1.2526	0.0055944	-0.9324	0.019754	0.0010197	-0.032008	-0.19993	-0.22543	-0.034678	-0.13094	-0.49335	0.00043597	-0.0075934	-0.13939	-0.003757	0.083275	-0.44777	-0.54873	-0.036941	-0.57082	0.21698	0.011146	0	0.092286	-0.21243	0.0020107	0.21072	
Deletion Peak  2 - CN values	2q36.3 	chr2:213561821-243199373(probes 3076:3284)	chr2:226228053-226330746(probes 3177:3178)	chr2:209557515-243199373(probes 3033:3284)	1.5786e-06	 3.4229e-06		Actual Copy Change Given	-0.085649	0.0067384	-0.45286	-0.0090475	-0.057227	0.0088109	-0.57597	0.023256	-0.8898	-0.64779	-0.026898	-0.12984	-0.0098807	-0.10649	-0.39845	-0.58189	0.40212	0.13191	-0.8385	-0.0027584	-0.20352	0.21911	-0.57032	0.042226	-0.28159	0.0083434	-0.57974	-0.11375	0.009225	-0.36414	-0.32944	0.03585	-0.39453	-0.27918	-1.3626	-0.70313	-0.050011	-0.46251	0.39817	0.00926	0	-0.54603	-0.43573	0.061927	2.5043e-05	-0.64477	-0.072327	0.24525	0.015102	-0.40676	-0.56149	0.22131	0.0093478	-0.58898	-0.22929	-0.51988	-0.082586	0.0007513	-0.021064	-0.68284	0.12637	-0.47405	-0.014147	-0.053399	-0.23353	-0.45471	0	-0.11893	-0.0017859	-0.52265	-0.00033976	0.30535	-0.42024	-0.25027	0.00196	-0.72078	0	-0.050178	0.17756	-0.44243	-0.70883	0	0	-0.43714	0.014014	-0.49486	-0.94455	-0.024738	-0.049488	-0.032008	-0.66273	-0.30059	-0.034678	-0.13094	-1.0471	-0.35917	-0.0075934	-0.13939	-0.003757	-0.00077328	-0.44777	-0.54873	-0.036941	0.088806	-0.021886	0.011146	-0.33776	0.092286	-0.80368	-0.27098	-0.65308	
Deletion Peak  3 - CN values	3p12.3 	chr3:29492201-93921214(probes 3526:4030)    	chr3:74851549-75002284(probes 3817:3820)    	chr3:74851549-75024236(probes 3817:3823)    	0.15098	    0.15098		Actual Copy Change Given	-0.090451	0.22608	0.41112	-0.015981	-0.052019	0.016909	-0.31716	0.0033004	-0.0026768	0.010246	-0.32262	-0.69922	0.01933	-0.13903	-0.37604	-0.046923	0.39405	0.15155	0.51282	-0.0067638	0.09178	-0.19764	-0.079286	0.63167	6	-0.0053525	1.1184	0.56241	0.0081061	0.46741	-0.25576	0.16361	-0.40709	-1.1084	0.057048	-0.77747	0.35423	-0.0073025	0.050602	0.18737	-0.54457	0.031921	0.19429	0.087068	0	0.34353	-0.15357	-0.52704	2.1922	0.094328	0.045906	0.3004	0.43743	0.24776	0.25527	0.030696	-0.2831	0.036366	-0.026458	0.55633	-0.47602	-0.025424	0.26461	-0.012348	-0.62107	0.064979	-0.28537	0.0076227	0.025376	-0.54054	0	0.28851	-0.38221	0.069251	0	-0.71922	-0.0023139	0.016207	0.034194	0.47717	-0.049088	1.0179	-0.00043112	-0.45555	-0.60577	-0.56145	0.022146	0.023464	-0.89856	0.016536	-0.58349	-0.23877	-0.27019	0.39174	0.0094215	-0.39731	-0.0018302	0.2954	0.030583	-0.039759	0.69671	-0.53459	0	-0.021312	0.36354	-0.25424	-1.1819	-0.63336	-0.74626	-0.28726	-0.49156	
Deletion Peak  4 - CN values	4q22.1 	chr4:91529434-92226970(probes 5578:5603)    	chr4:91795806-91872297(probes 5591:5592)    	chr4:91529433-92315174(probes 5577:5605)    	0.0061473	   0.016605		Actual Copy Change Given	0	-0.42835	-0.091094	-0.027911	-0.030666	-0.030825	-0.12484	-0.0066146	-0.0079502	-0.021188	-1.0602	-0.15134	-0.00051404	-0.018776	0.098959	-0.082996	-0.39882	-0.18184	-0.40124	-0.34668	-0.053481	-0.38536	0.2638	-0.27881	-0.085515	-0.00076294	0.0070737	-0.29216	0.023206	-0.17223	-0.35514	-0.2783	-0.38531	0.28484	0	-0.015045	-0.3399	0.43883	-1.0082	-0.047489	0.0028096	-0.25109	-0.73719	0.27744	0.04026	0.10295	-0.27386	-0.23485	-0.13206	-0.40554	0	-0.037919	-0.33236	-0.56237	-0.015669	0.034526	-0.1313	-0.017592	0.086141	-0.6657	-0.9409	-0.69099	-0.00052167	-0.16974	-0.029184	0.053058	-0.313	-0.27182	-0.011117	-0.048429	0.0077941	0.27654	-0.34868	-0.52279	-0.010057	0	-0.5758	-0.19885	0.0041326	-0.00095261	-0.088777	-0.074567	0.014054	-0.4538	0.24441	-0.016749	-0.96753	-0.0073506	-0.89213	-0.0037228	-0.14581	-0.75377	-0.054542	-0.27022	0.033823	0.37949	-0.44422	0.0083614	-0.015881	-0.043646	-0.15331	0.1817	-0.018619	0.021791	-0.0032534	-0.01804	-0.423	-1.1434	-0.24106	-0.25774	-0.48319	
Deletion Peak  5 - CN values	4q34.3 	chr4:155656891-191154276(probes 6130:6299)	chr4:180336313-182164889(probes 6246:6255)	chr4:179040609-182948619(probes 6244:6269)	0.041844	    0.18485		Actual Copy Change Given	0	-0.019357	-0.42068	-0.027911	-0.052915	-0.030825	-0.59944	-0.0066146	-0.016152	-0.021188	-0.34285	-0.14833	-0.00051404	-0.018776	0.098959	-0.082996	-0.39882	-0.19188	-0.40124	-0.020174	-0.053481	-0.36417	0.31837	-0.26964	-0.085515	-0.00076294	0.0070737	-0.29216	-0.00055129	-0.17223	-0.35514	-0.2783	-0.38531	0.28484	0	-0.015045	-0.37877	-0.013219	0.38368	-0.18443	0.0028096	-0.13402	-0.73725	-0.012641	-0.072179	-0.22513	-0.11432	-0.3216	-0.27963	-0.40554	0	-0.14171	0.12157	-0.65387	-0.097803	0.034526	-0.1313	-0.017592	0.086141	-0.63805	-0.80987	0.01557	-0.00052167	-0.16974	-0.029184	-0.13148	-0.313	-0.12804	-0.011117	-0.048429	0.0077941	0.23189	-0.05659	-0.53397	-0.010057	-0.73879	-0.5758	-0.055038	-0.03133	0.51236	0.36725	-0.097953	-0.0099225	-0.45546	-0.091109	-0.019025	-0.96753	-0.0073506	-0.89213	-0.497	-1.2778	-0.77187	-0.054542	-0.27022	0.0053093	-0.37727	-0.79704	0.0083614	0.22164	-0.026364	-0.73454	-0.53563	-0.018619	-0.014568	-0.098218	-0.01804	-1.0227	-0.61715	-0.68501	-0.25774	-0.48319	
Deletion Peak  6 - CN values	5q12.1 	chr5:45373655-78981219(probes 6668:6908)    	chr5:59114477-59132728(probes 6788:6789)    	chr5:58901156-59587451(probes 6778:6802)    	0.017916	   0.017916		Actual Copy Change Given	-0.38685	-0.4286	-0.9268	0.53425	-0.20061	-0.002352	-0.43412	0	0.89233	-0.02144	-0.3535	-0.51799	-0.0087869	-0.13288	-0.09253	-1.2785	-0.42369	-0.19597	-0.37943	-0.39824	-0.19568	0.0069786	-0.59334	-0.29674	-0.33966	-0.0051125	0.56891	-0.62856	-0.85841	0	-0.04464	-0.0024111	-0.035418	0.48251	-0.53411	-0.0078903	0.005602	-0.45244	-1.1614	-0.014006	0.00265	1.2938	-0.53602	-0.011485	0.024669	0	-0.16072	0	-0.26882	-0.81231	-0.25408	-0.32131	-0.35962	-0.20397	-0.18608	-0.55148	-0.28617	0.016179	-0.3959	-0.68339	-0.32821	-0.69874	0	-0.049831	0.0065943	-0.77336	-0.35921	0.036106	-0.0062366	-0.5082	-0.020012	-0.010551	-0.36411	-0.55898	-0.69001	-0.71954	0.0063751	-0.11293	-0.0024615	-0.43426	-0.68852	0.46796	0.010824	-0.4028	0.014669	-0.011647	0.010562	0.0032131	-0.88391	0.050198	-0.65747	-0.28249	0.50473	-0.14933	0.060016	-0.0063881	-0.45421	-0.13841	-0.0036013	0.0085824	-0.019126	-0.54629	-0.90784	0.090111	-0.40638	-0.21804	-0.35723	-0.66352	-0.75231	-0.0070432	-0.46169	
Deletion Peak  7 - CN values	6p25.3 	chr6:1-5266921(probes 7552:7616)                	chr6:1-1875640(probes 7552:7567)                	chr6:1-2054356(probes 7552:7570)                	0.1813	     0.1813		Actual Copy Change Given	-0.022411	0.0024964	0.0061649	-0.0071041	0.1254	0	0.81465	-0.001778	-0.0020132	-0.0087126	-0.033033	0.055432	0.068424	0.15211	-0.39952	-1.2334	-0.39021	-0.18977	-0.40774	1.5381	0	0.13821	0.0086709	-0.39664	-0.028989	0	-0.00045761	-0.30187	-0.029076	0.052352	0.43241	0	-0.76273	-0.00085122	0.58414	0.00089208	0.28251	0.43754	0.60811	-0.049603	-0.56078	-0.67155	-0.17745	-0.09223	-0.060112	-0.29549	-0.02095	-0.3844	0.19712	0.043229	-0.58181	0.26173	0.0023507	-0.28705	-0.16659	-0.0096599	0.048297	0.014277	-0.69711	-0.6358	0	0.0076514	0.003246	0.12611	-0.59948	0.13634	-0.29753	-0.18824	0.017731	0.55412	0.010532	-0.36793	0.26618	-0.27097	-0.0010764	-0.72652	0.011418	-0.026245	0.19728	0.72765	0.10173	0.47576	0.098127	0.12093	0	0.01015	-0.0077258	0.012541	0.023633	-0.016739	1.0491	0.10746	0	0.13909	0.53304	0.00103	0.35533	-0.14129	0.012992	-0.60571	0.0021824	0.69448	0.050617	-0.65311	-0.027779	-0.022054	-0.45176	-0.26682	0.27694	-0.10124	1.6017	
Deletion Peak  8 - CN values	6q21   	chr6:89342867-122609798(probes 8460:8629)  	chr6:108463916-116939576(probes 8549:8592)	chr6:106974674-119625836(probes 8531:8606)	0.047475	   0.047475		Actual Copy Change Given	0.2841	0.0024964	-0.033762	-0.0071041	0.16651	0	-0.22264	-0.001778	-0.0020132	-0.0087126	-0.11589	-0.80146	0.068424	0.028345	-0.011618	0.63114	-0.39021	-0.16034	-0.40774	-0.0055064	-0.14267	-0.18904	-0.080372	-0.25327	0.1503	-0.9721	0.0033128	-0.29319	-0.012264	-0.35688	-0.032737	0	0.46858	-0.042755	-0.91399	0.00089208	-0.37255	-0.0069792	-0.46226	-0.10787	-0.56078	0.38766	-0.064583	-0.070848	-0.028345	-0.31775	0.50218	-0.20535	-0.6671	-0.26173	-0.53064	-0.035454	-0.35662	-0.28705	0.093353	0.0072248	0.048297	0.00041745	-0.36608	-0.64525	-0.79036	0.0076514	0.003246	0.053273	0.0025903	-0.5408	-0.031647	-0.10959	0.017731	-0.016401	0.010532	-0.04024	-0.36677	-0.55606	-0.0010764	-0.72652	0.011418	-0.017195	-0.48953	-0.41298	-0.67146	-0.087179	-0.57834	0.020028	-0.079556	-0.011713	0.016633	-0.55119	0.023633	-0.21734	-0.63049	0.10746	-0.24072	0.13909	-0.50617	0.00103	0.38581	-0.28229	0.012992	-0.0062902	0.0021824	-1.1351	-0.54947	-0.57796	-0.42339	-0.022054	-0.36081	-1.0481	-1.2585	-0.24904	-0.48634	
Deletion Peak  9 - CN values	8p22   	chr8:1-31636712(probes 9943:10095)             	chr8:16715659-17786984(probes 9997:10000)   	chr8:1-35338054(probes 9943:10157)             	4.8163e-06	 4.8163e-06		Actual Copy Change Given	-0.35579	0.014303	-0.43577	0.71958	-0.20894	0.0016297	0.38475	-0.0041376	-0.071712	0.0075254	-0.3758	-0.037613	0	-0.44362	-0.042258	-0.042223	-0.24427	-0.46045	-0.019729	-0.41378	-0.26438	-0.64274	0.94532	0.016917	-0.43383	-0.22692	0.014692	0.4037	-0.010794	-0.78264	-0.3077	-0.15984	-0.76877	-0.57739	-0.93342	-0.7473	-0.38442	-0.28644	-1.096	0.039781	0.0091999	-1.0282	-1.1879	0	0.027237	-0.3156	-0.045216	-0.04496	-0.61309	-0.85285	-0.55527	-0.36898	-0.36915	-0.6155	-0.171	-0.55073	0.04557	0.002013	-0.0071013	1.0546	0.10999	-0.61214	0.079065	-0.25849	-0.43104	-0.30979	-0.6524	-0.25263	0.041077	-0.52803	-0.0034596	-0.37544	-0.78753	-0.58696	-0.69401	0.0059063	-0.5785	-0.26313	-0.10799	-0.90686	-0.65836	-0.11592	0.0025418	-0.9224	-0.02098	-0.53052	0.033581	0.50853	-0.0047482	-0.65781	-1.0243	0.20991	0.49769	0.028671	-0.9469	-0.40068	-0.94385	-0.14735	-0.24043	0.082578	1.8509	-0.62115	-0.89986	-0.60543	-0.43014	-0.48753	-0.88416	-1.0445	0.28597	-0.29088	-1.0044	
Deletion Peak 10 - CN values	9p21.3 	chr9:21964593-22024723(probes 11685:11696)  	chr9:21973950-21998310(probes 11690:11693)  	chr9:20952233-24116907(probes 11608:11770)  	1.6889e-52	 1.6889e-52		Actual Copy Change Given	-0.49392	-0.67759	-1.1906	0.22664	-1.0739	-0.97321	-0.63665	-0.0015652	-1.5	-1.2884	0.0047586	-1.4331	-0.27627	-0.53619	-1.0308	-0.05915	-0.38987	-0.022697	0.032159	1.5564	-0.1891	-0.41634	-1.5	-0.97626	-0.072668	-1.5	-0.58002	-1.5	-1.5	-0.38332	0.12114	-0.30655	0.31055	-1.5	1.0049	-1.4835	-0.72418	-1.3591	-0.058719	-1.5	-0.55308	1.0364	0.39371	-1.5	-1.5	0.017753	1.2697	0.065345	0.39533	-0.7751	-0.018343	-0.31481	-0.6527	-0.57716	0.0060195	0.027576	-0.69098	-0.01849	-0.40474	-0.14591	-1.5	-1.4135	-0.0073788	0.1291	-0.011269	-1.5	0.58423	0.12155	-0.040257	0.90336	-1.5	-1.0664	-0.024655	0.12305	-1.3911	-0.72503	-0.00020553	-0.64942	-1.0092	-0.88285	-0.14965	-0.090074	-1.1612	-1.3905	0.59807	-0.025892	0.042667	-0.010343	-0.96945	-0.80262	-0.65872	-0.84536	0.4566	-0.050855	-0.5192	-0.060011	0.42308	0.19111	-1.5	-0.64884	-0.0107	-1.1448	0.018333	1.1236	-1.226	-0.016639	-1.4838	-1.5	-0.73554	-0.75207	-1.5	
Deletion Peak 11 - CN values	12p13.1	chr12:4377550-20130606(probes 14460:14560)  	chr12:14209365-14667684(probes 14512:14515)	chr12:13510500-14974230(probes 14508:14518)	0.15098	    0.15098		Actual Copy Change Given	0.37811	0.0052044	-0.035355	0.76866	0.035873	-0.010141	0.83441	0.024827	0.00076851	0.083561	-0.0058715	-0.71011	0.00048951	-0.17595	0.22411	-0.75353	0.24885	0.71756	0.0055472	0.39257	0.17449	0.1871	-0.034611	0.033847	0.24783	-0.97458	-0.0047699	0.48624	0.94977	-0.84695	0.35579	-0.12791	0.60508	0.56094	-0.44742	-0.0048763	-0.059149	0.027084	-0.51442	-0.1151	0.0024102	-0.59375	-0.076135	-0.092664	-0.021665	0.044196	-0.12861	-0.041663	0.036952	-0.084435	-0.57129	-0.081798	-0.38734	-0.0024721	-0.067166	-0.015202	0.10096	-0.0020374	0.36146	-0.054701	-0.2994	0.012121	-0.0045708	0.14154	-0.00067595	0.041162	0.54811	-0.054749	0.038809	-0.0035239	0.0084099	0.51641	-0.020426	-0.25967	0.0071576	0.032561	0.022166	0.33864	-0.19129	-0.41793	0.17094	-0.078112	-0.0067843	0.0057512	0.0054893	-0.0047552	0.088234	0.0068428	0.066937	0.024584	0.59013	0.10102	0.48199	0.49392	0.55953	0	-0.46736	-0.00043089	0	-0.65027	0.013048	-1.0341	-0.0077206	0.4966	0.0018925	0.0053765	0.1765	0.0047477	1.1214	0.016423	0.52936	
Deletion Peak 12 - CN values	13q14.2	chr13:47328496-51676610(probes 15797:15844)	chr13:48909600-49102445(probes 15819:15824)	chr13:38597723-53512351(probes 15717:15865)	3.9646e-06	 3.9646e-06		Actual Copy Change Given	-0.01141	0.027991	-0.42708	-0.75482	0.89372	-0.010944	-0.48494	-0.0095586	-0.0096421	0.64449	-0.69972	-0.44177	0.10273	-0.013582	-0.39584	-0.55332	-0.025222	0.40432	-0.20609	-0.40249	-0.18621	-0.42201	-0.045391	0	-0.32342	0.0056633	0.0033054	0.53184	-0.12804	0.16928	0.32754	0.0018371	0.29525	0.0029808	-1.5	0.71391	-0.37223	-0.012629	-0.4978	-0.12338	-0.030247	-0.58952	-0.59775	-0.90339	-0.05524	-0.32533	0.35747	-0.26746	-0.82924	-0.44544	0.49552	-0.37161	-0.38632	-0.0062393	0.35782	-0.64611	0	-0.019147	0.3149	-1.298	-0.93396	-0.70436	-0.0049004	-0.24212	-0.028832	-0.26639	-0.3418	-0.2734	-0.028523	-1.0287	-0.012094	-0.044522	-0.36763	0.047274	0.60923	-0.56476	-0.0095809	0.19348	-0.29048	-0.43355	-1.4892	1.0603	0.0061623	0.063817	-0.024153	0.48389	-0.11703	-0.54307	0.0037967	0.010736	-0.13265	-0.77599	-0.053286	-0.31912	-0.074415	0.098285	-0.067794	-0.5922	-0.010414	-0.065015	0.011321	-1.1627	-0.42916	0.52042	0.37317	-0.058321	0.18502	0.06026	-0.75381	0.26165	0.034526	
Deletion Peak 13 - CN values	15q12  	chr15:1-43566404(probes 16946:17027)       	chr15:25931333-31170354(probes 16961:16973)	chr15:25931333-31815000(probes 16961:16976)	0.065318	   0.065318		Actual Copy Change Given	-0.15571	0.016865	-0.29824	0.0047099	-0.24601	0.014392	-0.52664	0.0033112	0.010506	0.011656	-0.011365	0.028094	0.0054821	-0.13894	-0.38583	-0.028858	-0.39316	-0.41733	0.026592	-0.018833	0.044629	-0.74199	0.25683	0.019706	0.090469	0.002238	-0.028252	-0.0068592	0.19207	-0.020242	-0.02739	0.0038553	-0.39196	-0.016203	-0.91432	0.28555	-0.011887	0.45916	-0.5452	0.0080216	-0.00064468	0.3251	-0.6368	-0.008549	-0.029603	-0.3081	0.074245	-0.1232	-0.028119	-0.13944	-0.040717	-0.38388	-0.055067	0.037827	-0.086362	-0.05434	0.092905	-0.023704	0.051439	-0.073968	-0.33282	0.0013131	-0.001803	-0.17262	0.004466	-0.015812	-0.041403	-0.11253	-0.021698	-0.54794	0.0085835	-0.35983	-0.39262	-0.0074787	-0.0056411	-0.71862	0.025547	-0.22274	-0.0038237	0	0.012786	-0.093216	-0.029379	-0.44069	0.016183	0.034555	-0.95984	0.0103	0.018009	-0.89023	-0.28187	0.12662	0.4574	-0.16019	-0.52068	-0.0023266	-0.055733	-0.14684	0.028031	0.0068222	-0.016887	-0.50954	-0.88523	0.59028	-0.42903	-0.24018	-0.4929	-1.0281	-0.31529	-0.027219	0.43522	
