
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/12/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/12/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering_new/BRCA-TP/4490891/BRCA-TP.mergedcluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/BRCA-TP/4434568/BRCA-TP.clin.merged.picked.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=.05", "-cQ=0.25", "-MF=ALL", "-oT=BRCA-TP", "-nV=Nozzle.R1", "-OP=AGGREGRATED_CLUSTER", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=BRCA-TP"
[1] "opt"                     "-OP=AGGREGRATED_CLUSTER"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"                 "AGGREGRATED_CLUSTER"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/BRCA-TP/4434568/BRCA-TP.clin.merged.picked.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering_new/BRCA-TP/4490891/BRCA-TP.mergedcluster.txt"

nPatients in clinical file=971, in cluster file=1005, common to both=966
[1]  12 966
[1] "MRNA_CNMF"
[1] 3
  1   2   3   4   5   6   7   8 
 21  39 121 101 110  74  20  40 
  1   2   3   4   5   6   7   8 
 21  39 121 101 110  74  20  40 
[1] "MRNA_CHIERARCHICAL"
[1] 3
  1   2   3 
124 131 271 
  1   2   3 
124 131 271 
[1] "CN_CNMF"
[1] 3
  1   2   3   4   5 
359 227  75 241  47 
  1   2   3   4   5 
359 227  75 241  47 
[1] "METHLYATION_CNMF"
[1] 3
  1   2   3   4   5   6 
103 153 103 137  40 107 
  1   2   3   4   5   6 
103 153 103 137  40 107 
[1] "RPPA_CNMF"
[1] 3
  1   2   3 
152 136 120 
  1   2   3 
152 136 120 
[1] "RPPA_CHIERARCHICAL"
[1] 3
  1   2   3 
163 115 130 
  1   2   3 
163 115 130 
[1] "MRNASEQ_CNMF"
[1] 3
  1   2   3   4   5   6   7 
172 139 206 152 224  45  15 
  1   2   3   4   5   6   7 
172 139 206 152 224  45  15 
[1] "MRNASEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
281 240 432 
  1   2   3 
281 240 432 
[1] "MIRSEQ_CNMF"
[1] 3
  1   2   3 
256 422 268 
  1   2   3 
256 422 268 
[1] "MIRSEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
218 359 369 
  1   2   3 
218 359 369 
[1] "MIRSEQ_MATURE_CNMF"
[1] 3
  1   2   3 
252 190 183 
  1   2   3 
252 190 183 
[1] "MIRSEQ_MATURE_CHIERARCHICAL"
[1] 3
  1   2   3 
144 307 174 
  1   2   3 
144 307 174 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
 [1] "YEARSTOBIRTH"                          
 [2] "VITALSTATUS"                           
 [3] "DAYSTODEATH"                           
 [4] "DAYSTOLASTFOLLOWUP"                    
 [5] "PRIMARYSITEOFDESEASE"                  
 [6] "NEOPLASM.DISEASESTAGE"                 
 [7] "PATHOLOGY.T.STAGE"                     
 [8] "PATHOLOGY.N.STAGE"                     
 [9] "PATHOLOGY.M.STAGE"                     
[10] "DCCUPLOADDATE"                         
[11] "GENDER"                                
[12] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
[13] "DAYSTOLASTKNOWNALIVE"                  
[14] "RADIATIONTHERAPY"                      
[15] "HISTOLOGICALTYPE"                      
[16] "RADIATIONS.RADIATION.REGIMENINDICATION"
[17] "NUMBER.OF.LYMPH.NODES"                 
[18] "BATCHNUMBER"                           

Input Data has 18 rows and 966 columns.

[1] "Batch" "18"   
[1] "Last Follow UP"
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH 
         259          437         1320         1463          433         1437 
TCGA-A1-A0SI TCGA-A1-A0SJ TCGA-A1-A0SK TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SO 
         634          426           NA          242         1196          852 
TCGA-A1-A0SP TCGA-A1-A0SQ TCGA-A2-A04N TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04R 
         583          553         3188           NA         1275         2499 
TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A04Y 
        2246          670           NA         1948         1686         1099 
TCGA-A2-A0CK TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CO TCGA-A2-A0CP TCGA-A2-A0CQ 
        3819         1963           NA         3408         2813         2694 
TCGA-A2-A0CR TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CW 
        3283         2298         2288           NA         1929         1947 
TCGA-A2-A0CX TCGA-A2-A0CY TCGA-A2-A0CZ TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 
        1728         1673         1615          643         1051         1027 
TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0EP 
         875          767         3093         2717         2441         3273 
TCGA-A2-A0EQ TCGA-A2-A0ER TCGA-A2-A0ES TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0EV 
        2426         2262         1127         1066         1043          968 
TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0EY TCGA-A2-A0ST TCGA-A2-A0SU TCGA-A2-A0SV 
         904          752          735         3017         1661           NA 
TCGA-A2-A0SW TCGA-A2-A0SX TCGA-A2-A0SY TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 
          NA         1534         1347          533          520           NA 
TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T5 TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC 
         569          624          531          575          631          989 
TCGA-A2-A0YD TCGA-A2-A0YE TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YI 
         769          553          469          665          658          441 
TCGA-A2-A0YJ TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A0YM TCGA-A2-A0YT TCGA-A2-A1FV 
         565          587          445          964           NA          714 
TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A1FZ TCGA-A2-A1G0 TCGA-A2-A1G1 TCGA-A2-A1G4 
         528         1119          683          616          583          595 
TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25D 
         501         1595         3276          496          523          552 
TCGA-A2-A25E TCGA-A2-A25F TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A3XS TCGA-A2-A3XT 
        2796          322          635         1205           NA         2525 
TCGA-A2-A3XU TCGA-A2-A3XV TCGA-A2-A3XW TCGA-A2-A3XX TCGA-A2-A3XY TCGA-A2-A3XZ 
          NA          428         1505         1168         1064          972 
TCGA-A2-A3Y0 TCGA-A2-A4RW TCGA-A2-A4RX TCGA-A2-A4RY TCGA-A2-A4S0 TCGA-A2-A4S1 
        1166          222          274          268          271          365 
TCGA-A2-A4S2 TCGA-A2-A4S3 TCGA-A7-A0CD TCGA-A7-A0CE TCGA-A7-A0CG TCGA-A7-A0CH 
         205          104         1165         1074         1043         1079 
TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A0DA TCGA-A7-A0DB TCGA-A7-A13D TCGA-A7-A13E 
         930         1139          373         1006          267          326 
TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A13H TCGA-A7-A26E TCGA-A7-A26F TCGA-A7-A26G 
         387          348          899          421          459          333 
TCGA-A7-A26H TCGA-A7-A26I TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3IY TCGA-A7-A3IZ 
         399          369          369          390          151          322 
TCGA-A7-A3J0 TCGA-A7-A3J1 TCGA-A7-A3RF TCGA-A7-A425 TCGA-A7-A426 TCGA-A7-A4SA 
          76          343          408          446          364          241 
TCGA-A7-A4SB TCGA-A7-A4SC TCGA-A7-A4SD TCGA-A7-A4SE TCGA-A7-A4SF TCGA-A7-A56D 
         200          215          168          371          369          177 
TCGA-A7-A5ZV TCGA-A8-A06N TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06R 
         210           NA          396          396           31          546 
TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 
        1249           NA           NA          791           31          517 
TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07C TCGA-A8-A07E TCGA-A8-A07F 
        1641          274         1004          580          608          576 
TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07J TCGA-A8-A07L TCGA-A8-A07O TCGA-A8-A07P 
         576          426          365          517          304          334 
TCGA-A8-A07R TCGA-A8-A07S TCGA-A8-A07U TCGA-A8-A07W TCGA-A8-A07Z TCGA-A8-A081 
         273          242          303          304          853           NA 
TCGA-A8-A082 TCGA-A8-A083 TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A 
         549           NA          458         1124          396           30 
TCGA-A8-A08B TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08H TCGA-A8-A08I 
         702          607          549          606           NA          365 
TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08O TCGA-A8-A08P TCGA-A8-A08R TCGA-A8-A08S 
          NA           NA          942          942           30          580 
TCGA-A8-A08T TCGA-A8-A08X TCGA-A8-A08Z TCGA-A8-A090 TCGA-A8-A091 TCGA-A8-A092 
        2830         1034         1217           NA          580          487 
TCGA-A8-A093 TCGA-A8-A094 TCGA-A8-A095 TCGA-A8-A096 TCGA-A8-A097 TCGA-A8-A099 
         545           NA         1276           NA          365          304 
TCGA-A8-A09A TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09G 
         304          365           31          396          942           NA 
TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R 
        1006          911          457           31          761          273 
TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09W TCGA-A8-A09X TCGA-A8-A09Z TCGA-A8-A0A1 
         578          457           30           NA           NA          365 
TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0A7 TCGA-A8-A0A9 TCGA-A8-A0AB 
         578          396          640           30          396          517 
TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23G TCGA-AC-A23H TCGA-AC-A2B8 
        1157           29           72          329           81           44 
TCGA-AC-A2BK TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK 
        1172         1162           44         1685         1125         1180 
TCGA-AC-A2FM TCGA-AC-A2FO TCGA-AC-A2QH TCGA-AC-A2QI TCGA-AC-A2QJ TCGA-AC-A3BB 
          NA         1542           31           28           69           30 
TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3TN TCGA-AC-A3W6 TCGA-AC-A3YI 
          21           35          286           34           51           46 
TCGA-AC-A3YJ TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A046 TCGA-AN-A049 
          39           10           10            7           10           19 
TCGA-AN-A04A TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AL 
          89           54           52          243          223          197 
TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FD TCGA-AN-A0FF 
           5            9            9           10          195          140 
TCGA-AN-A0FJ TCGA-AN-A0FK TCGA-AN-A0FL TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0FT 
         241          212          230          218          191          183 
TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0FX TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0G0 
          10           11           10           10           10           16 
TCGA-AN-A0XL TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS 
          10           10          375            9           10           10 
TCGA-AN-A0XT TCGA-AN-A0XU TCGA-AN-A0XV TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M 
          10           10          162          170         2442         1455 
TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03U 
        1645           NA         2576         2091         1456           NA 
TCGA-AO-A03V TCGA-AO-A0J2 TCGA-AO-A0J3 TCGA-AO-A0J4 TCGA-AO-A0J5 TCGA-AO-A0J6 
         886          997          651          537          735         1140 
TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JA TCGA-AO-A0JB TCGA-AO-A0JC 
         617          680         1612          655         1542         1547 
TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JI TCGA-AO-A0JJ 
        2190         2334          650          798         1172         1887 
TCGA-AO-A0JL TCGA-AO-A0JM TCGA-AO-A124 TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A128 
        1683         2184         3119         3018         2850         2877 
TCGA-AO-A129 TCGA-AO-A12A TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12D TCGA-AO-A12E 
        2923         2754         2359         1993         1948         1742 
TCGA-AO-A12F TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KO TCGA-AO-A1KP TCGA-AO-A1KQ 
        1471         1265          862          448         2513         1882 
TCGA-AO-A1KR TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A04J TCGA-AQ-A04L 
        2140           16          541          754          819         3957 
TCGA-AQ-A0Y5 TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AQ-A54N TCGA-AQ-A54O TCGA-AR-A0TP 
          NA          475          402           77          665         2521 
TCGA-AR-A0TQ TCGA-AR-A0TR TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TU TCGA-AR-A0TV 
        1500           NA         1138         1679          360          904 
TCGA-AR-A0TW TCGA-AR-A0TX TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U0 TCGA-AR-A0U1 
         739           15           NA         1313            8          185 
TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ 
          NA         2263         1627         2298         1881         1604 
TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AM TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AP 
        1558         1485         1903         1329         1324         1215 
TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AS TCGA-AR-A1AT TCGA-AR-A1AU TCGA-AR-A1AV 
        1309           NA         1242           NA         1409         1295 
TCGA-AR-A1AW TCGA-AR-A1AX TCGA-AR-A1AY TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24L 
        1072         1103          614         3333         1548         2221 
TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24Q TCGA-AR-A24R 
        1990         2074         1997           26         2008         1745 
TCGA-AR-A24S TCGA-AR-A24T TCGA-AR-A24U TCGA-AR-A24V TCGA-AR-A24W TCGA-AR-A24X 
        1888         1620         1623         1648         1550         1465 
TCGA-AR-A24Z TCGA-AR-A250 TCGA-AR-A251 TCGA-AR-A252 TCGA-AR-A254 TCGA-AR-A255 
        1574         1707         1373         1236         1212         1058 
TCGA-AR-A256 TCGA-AR-A2LE TCGA-AR-A2LH TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM 
          NA         3913           NA         1303          223         1217 
TCGA-AR-A2LN TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-AR-A2LR TCGA-AR-A5QM TCGA-AR-A5QN 
         519          633          516          620         1664          487 
TCGA-AR-A5QP TCGA-AR-A5QQ TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I5 TCGA-B6-A0I6 
         622           NA           NA         4360         4549           NA 
TCGA-B6-A0I8 TCGA-B6-A0I9 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IE 
          NA           NA         6718           NA           NA           NA 
TCGA-B6-A0IG TCGA-B6-A0IH TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IM TCGA-B6-A0IN 
          NA           NA         5383           NA         3836           NA 
TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RG TCGA-B6-A0RH 
        3350         3374         4284         6434         2082         5748 
TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP 
        7125           NA           NA         5261         4928           NA 
TCGA-B6-A0RQ TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0RV TCGA-B6-A0WS 
          NA           NA         2721         3991         4788           NA 
TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WX TCGA-B6-A0WY TCGA-B6-A0WZ 
        5739           NA          546           NA           NA         3941 
TCGA-B6-A0X0 TCGA-B6-A0X1 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A0X7 TCGA-B6-A1KC 
          NA         5671           NA           NA           NA         1326 
TCGA-B6-A1KF TCGA-B6-A1KI TCGA-B6-A1KN TCGA-B6-A2IU TCGA-BH-A0AU TCGA-BH-A0AV 
        3088         2236         4233         5176          746         1180 
TCGA-BH-A0AW TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B3 
         622          777          867         1427         1148         1203 
TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0B7 TCGA-BH-A0B8 TCGA-BH-A0B9 
        1191         1471         1732         1733         1569         1572 
TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BG TCGA-BH-A0BJ 
        1132          974          554          781          756          660 
TCGA-BH-A0BL TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ TCGA-BH-A0BR 
        1339         1117         1085         1481          826         1632 
TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BW TCGA-BH-A0BZ TCGA-BH-A0C0 
        1640         1386         1519          355         1492         1270 
TCGA-BH-A0C1 TCGA-BH-A0C3 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DE TCGA-BH-A0DG 
        1338         1464         1305         1393          948          713 
TCGA-BH-A0DH TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DL TCGA-BH-A0DO TCGA-BH-A0DP 
        1156          673          423         1467          525          476 
TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0DZ 
          98           77         1170         1374         1442          495 
TCGA-BH-A0E0 TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E6 TCGA-BH-A0E7 TCGA-BH-A0E9 
         133          477          435          292         1362         1405 
TCGA-BH-A0EA TCGA-BH-A0EB TCGA-BH-A0EE TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0GZ 
          NA          745          943          743          923          328 
TCGA-BH-A0H0 TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0H9 
         461         1149         1080          747          701         1247 
TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HL 
        1611          806          727          619          178           72 
TCGA-BH-A0HN TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A0HW 
         516           76          414         1121          392         1560 
TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A0W5 
         829         1544          170          728          175         1288 
TCGA-BH-A0W7 TCGA-BH-A0WA TCGA-BH-A18F TCGA-BH-A18G TCGA-BH-A18H TCGA-BH-A18I 
        1363          701          268           61           NA          220 
TCGA-BH-A18J TCGA-BH-A18K TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18N TCGA-BH-A18P 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A18V 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1EN TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EV 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1EW TCGA-BH-A1EX TCGA-BH-A1EY TCGA-BH-A1F0 TCGA-BH-A1F2 TCGA-BH-A1F5 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1F6 TCGA-BH-A1F8 TCGA-BH-A1FB TCGA-BH-A1FC TCGA-BH-A1FD TCGA-BH-A1FE 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1FG TCGA-BH-A1FH TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FN 
          NA           NA           NA           NA           NA           NA 
TCGA-BH-A1FR TCGA-BH-A1FU TCGA-BH-A201 TCGA-BH-A202 TCGA-BH-A203 TCGA-BH-A204 
          NA           NA          209           22           NA           NA 
TCGA-BH-A208 TCGA-BH-A209 TCGA-BH-A28O TCGA-BH-A28Q TCGA-BH-A2L8 TCGA-BH-A42T 
          NA           NA          323          196          612           30 
TCGA-BH-A42U TCGA-BH-A42V TCGA-C8-A12K TCGA-C8-A12L TCGA-C8-A12M TCGA-C8-A12N 
        3323          271           NA           NA           NA           NA 
TCGA-C8-A12O TCGA-C8-A12P TCGA-C8-A12Q TCGA-C8-A12T TCGA-C8-A12U TCGA-C8-A12V 
          NA           NA           NA           NA           NA           NA 
TCGA-C8-A12W TCGA-C8-A12X TCGA-C8-A12Y TCGA-C8-A12Z TCGA-C8-A130 TCGA-C8-A131 
          NA           NA           NA           NA           NA           NA 
TCGA-C8-A132 TCGA-C8-A133 TCGA-C8-A134 TCGA-C8-A135 TCGA-C8-A137 TCGA-C8-A138 
          NA           NA           NA           NA           26            7 
TCGA-C8-A1HE TCGA-C8-A1HF TCGA-C8-A1HG TCGA-C8-A1HI TCGA-C8-A1HJ TCGA-C8-A1HK 
          NA           NA           NA            2            5            7 
TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A1HO TCGA-C8-A26V TCGA-C8-A26W 
           2            6            2           NA            9            7 
TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A274 TCGA-C8-A275 
          11           13            4            6            1            1 
TCGA-C8-A278 TCGA-C8-A27A TCGA-C8-A27B TCGA-C8-A3M7 TCGA-C8-A3M8 TCGA-D8-A13Y 
           1          371           30            1            7          362 
TCGA-D8-A13Z TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A145 
         635          403          626          425          431          410 
TCGA-D8-A146 TCGA-D8-A147 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JB 
         643          584          431          532          502          569 
TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JH 
         480          552          575          366          366          426 
TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1JN 
         577          611          612          611          590          620 
TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1JU TCGA-D8-A1X5 TCGA-D8-A1X6 
         639          371          405          447          171          236 
TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC 
          85          272          380          274          201           81 
TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL 
         155          197          196          352          326          319 
TCGA-D8-A1XM TCGA-D8-A1XO TCGA-D8-A1XQ TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XT 
         538          242          499          482          496          193 
TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XW TCGA-D8-A1XY TCGA-D8-A1XZ TCGA-D8-A1Y0 
         395          460          385           81          120          166 
TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-D8-A27F TCGA-D8-A27G 
         115           72          124          530          227          409 
TCGA-D8-A27H TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27M TCGA-D8-A27N 
         140          439          287          125          144          145 
TCGA-D8-A27P TCGA-D8-A27R TCGA-D8-A27T TCGA-D8-A27V TCGA-D8-A27W TCGA-D8-A3Z5 
          23           90          397          381           15          441 
TCGA-D8-A3Z6 TCGA-D8-A4Z1 TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A108 
         184          223         1308         1807         1046          837 
TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A10F 
        1417         1229         1141         1219          865          878 
TCGA-E2-A14N TCGA-E2-A14O TCGA-E2-A14P TCGA-E2-A14Q TCGA-E2-A14R TCGA-E2-A14S 
        1434         1358         1246         1163         1174         1009 
TCGA-E2-A14T TCGA-E2-A14U TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y 
        1013         1318         1041          973          971          870 
TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A152 TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 
         518          773          825          707          591          640 
TCGA-E2-A156 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15A TCGA-E2-A15C TCGA-E2-A15D 
         726          450          762          710          693          525 
TCGA-E2-A15E TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J 
         629          657          553          393          529          589 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15M TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15R 
         274          626          234          395          595          519 
TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B4 
         428          456         2328         1631         1613          911 
TCGA-E2-A1B5 TCGA-E2-A1B6 TCGA-E2-A1BC TCGA-E2-A1BD TCGA-E2-A1IE TCGA-E2-A1IF 
         983          866          501          520         1165         1138 
TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1II TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL 
         997         1026         1025          864          688          117 
TCGA-E2-A1IN TCGA-E2-A1IO TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L7 TCGA-E2-A1L8 
         675          637          337         1648          834         1205 
TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A1LB TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH 
         597          748         1231           NA          574         3246 
TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E2-A2P5 TCGA-E2-A2P6 
        3121           NA         1309          470          514          167 
TCGA-E2-A3DX TCGA-E2-A56Z TCGA-E2-A570 TCGA-E2-A573 TCGA-E9-A1N3 TCGA-E9-A1N4 
         478          219          549          677           NA           NA 
TCGA-E9-A1N5 TCGA-E9-A1N6 TCGA-E9-A1N8 TCGA-E9-A1N9 TCGA-E9-A1NA TCGA-E9-A1NC 
          NA           NA           NA           NA           NA           NA 
TCGA-E9-A1ND TCGA-E9-A1NE TCGA-E9-A1NF TCGA-E9-A1NG TCGA-E9-A1NH TCGA-E9-A1NI 
          NA           NA           NA           NA           NA          307 
TCGA-E9-A1QZ TCGA-E9-A1R0 TCGA-E9-A1R2 TCGA-E9-A1R3 TCGA-E9-A1R4 TCGA-E9-A1R5 
          NA          434           19           64          185           42 
TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RA TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD 
          84          644           29          632         1228           20 
TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A1RH TCGA-E9-A1RI TCGA-E9-A226 
         658          199          646          625          424          627 
TCGA-E9-A227 TCGA-E9-A228 TCGA-E9-A229 TCGA-E9-A22A TCGA-E9-A22B TCGA-E9-A22D 
          24           NA          404           NA           NA           NA 
TCGA-E9-A22E TCGA-E9-A22G TCGA-E9-A22H TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A245 
          NA          310           NA          519           20           25 
TCGA-E9-A247 TCGA-E9-A248 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A295 TCGA-E9-A2JS 
          12           58           28           10           21          540 
TCGA-E9-A2JT TCGA-E9-A3HO TCGA-E9-A3Q9 TCGA-E9-A3QA TCGA-E9-A3X8 TCGA-E9-A54X 
          23          398          560           19          478           NA 
TCGA-E9-A54Y TCGA-E9-A5FK TCGA-E9-A5FL TCGA-E9-A5UO TCGA-EW-A1IW TCGA-EW-A1IX 
           7           12            8            7          371         1208 
TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J1 TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1J5 
         258          554          575          403          504          477 
TCGA-EW-A1J6 TCGA-EW-A1OV TCGA-EW-A1OW TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ 
         875          789          694          911          908         1229 
TCGA-EW-A1P0 TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1P4 TCGA-EW-A1P5 TCGA-EW-A1P6 
        1250         1210         1611          907          703          562 
TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PA TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PD 
         915           NA          575          608          186          424 
TCGA-EW-A1PE TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A2FS 
         320          439         1050          606         1673         1422 
TCGA-EW-A2FV TCGA-EW-A2FW TCGA-EW-A3E8 TCGA-EW-A3U0 TCGA-EW-A423 TCGA-EW-A424 
         427          672          647          532          309          322 
TCGA-GI-A2C8 TCGA-GI-A2C9 TCGA-GM-A2D9 TCGA-GM-A2DA TCGA-GM-A2DB TCGA-GM-A2DC 
         212         3348           NA         5909         1615         1628 
TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL 
        1309         1299         1286         1883         1896         2762 
TCGA-GM-A2DM TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NW TCGA-GM-A3NY TCGA-GM-A3XG 
        2331         2352         1622         3361         1162          981 
TCGA-GM-A3XL TCGA-GM-A3XN TCGA-GM-A4E0 TCGA-GM-A5PV TCGA-GM-A5PX TCGA-JL-A3YW 
        2108         1640         1753          412          551          360 
TCGA-JL-A3YX TCGA-LL-A440 TCGA-LL-A441 TCGA-LL-A442 TCGA-LL-A50Y TCGA-LL-A5YL 
         352           20           91          109          210          168 
TCGA-LQ-A4E4 TCGA-MS-A51U TCGA-OK-A5Q2 TCGA-OL-A5D6 TCGA-OL-A5D7 TCGA-OL-A5D8 
         484           85           64          385         1416          229 
TCGA-OL-A5DA TCGA-OL-A5RU TCGA-OL-A5RV TCGA-OL-A5RW TCGA-OL-A5RX TCGA-OL-A5RY 
        1356          841          733          797          513          429 
TCGA-OL-A5RZ TCGA-OL-A5S0 TCGA-OL-A66H TCGA-OL-A66I TCGA-OL-A66J TCGA-OL-A66K 
         313          298          448          721         1658         1031 
Variable 1:'AGE':	nDistinctValues=65,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 3:'DAYSTODEATH':	nDistinctValues=109,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'DAYSTOLASTFOLLOWUP':	nDistinctValues=623,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 5:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'NEOPLASM.DISEASESTAGE':	nDistinctValues=13,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'PATHOLOGY.T.STAGE':	nDistinctValues=12,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'PATHOLOGY.N.STAGE':	nDistinctValues=16,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'PATHOLOGY.M.STAGE':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=25,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 13:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=15,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 14:'RADIATION.THERAPY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 15:'HISTOLOGICAL.TYPE':	nDistinctValues=7,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 16:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 17:'NUMBER.OF.LYMPH.NODES':	nDistinctValues=29,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 18:'BATCH.NUMBER':	nDistinctValues=54,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "NEOPLASM.DISEASESTAGE"                 
[3] "PATHOLOGY.T.STAGE"                     
[4] "PATHOLOGY.N.STAGE"                     
[5] "PATHOLOGY.M.STAGE"                     
[6] "GENDER"                                
[7] "HISTOLOGICAL.TYPE"                     
[8] "RADIATIONS.RADIATION.REGIMENINDICATION"
[9] "NUMBER.OF.LYMPH.NODES"                 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T" "3"          
[1] "PATHOLOGY.N" "4"          
Output Data has 966 columns, 1 survival variables, and 9 non-survival variables.
AGE, nv=65, binary=FALSE, numeric=TRUE
NEOPLASM.DISEASESTAGE, nv=13, binary=FALSE, numeric=FALSE
PATHOLOGY.T.STAGE, nv=4, binary=FALSE, numeric=TRUE
[1] "grepl('PATHOLOGY.T',vnm)"
vv
 T1  T2  T3  T4 
254 560 114  35 
[1] "table(vv)"
vv
 T1  T2  T3  T4 
254 560 114  35 
$ClinVariableName
[1] "PATHOLOGY.T.STAGE"

$Table
vv
 T1  T2  T3  T4 
254 560 114  35 

$nClasses
[1] 4

$ClinVariableType
[1] "multiclass(4)"


 T1  T2  T3  T4 
254 560 114  35 
PATHOLOGY.N.STAGE, nv=4, binary=FALSE, numeric=TRUE
[1] "grepl('PATHOLOGY.N',vnm)"
vv
 N0  N1  N2  N3 
455 323 109  64 
[1] "table(vv)"
vv
 N0  N1  N2  N3 
455 323 109  64 
$ClinVariableName
[1] "PATHOLOGY.N.STAGE"

$Table
vv
 N0  N1  N2  N3 
455 323 109  64 

$nClasses
[1] 4

$ClinVariableType
[1] "multiclass(4)"


 N0  N1  N2  N3 
455 323 109  64 
PATHOLOGY.M.STAGE, nv=4, binary=FALSE, numeric=FALSE
GENDER, nv=2, binary=FALSE, numeric=FALSE
HISTOLOGICAL.TYPE, nv=7, binary=FALSE, numeric=FALSE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE
NUMBER.OF.LYMPH.NODES, nv=29, binary=FALSE, numeric=TRUE

Clustering(1) Variable = MRNA_CNMF
D1V1, survival
          sevent
clus2       0  1
  subtype1 16  3
  subtype2 35  3
  subtype3 93 18
  subtype4 83 13
  subtype5 96 11
  subtype6 51 15
  subtype7 16  3
  subtype8 33  6
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
      19       38      111       96      107       66       19       39 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
       3        3       18       13       11       15        3        6 
$subtype1
TCGA-A1-A0SD TCGA-A1-A0SH TCGA-A1-A0SM TCGA-A2-A0SV TCGA-A8-A06P TCGA-A8-A07G 
       14.37        47.24         7.96        27.12        13.02        18.94 
TCGA-A8-A07I TCGA-A8-A08Z TCGA-A8-A097 TCGA-AN-A03X TCGA-AN-A0AS TCGA-AN-A0XN 
       14.01        40.01        12.00         0.33         0.30         0.33 
TCGA-AN-A0XW TCGA-BH-A0DZ TCGA-BH-A0H6 TCGA-BH-A18J TCGA-BH-A1EO TCGA-D8-A141 
        5.59        16.27        24.56        20.09        91.99        20.58 
TCGA-E2-A153 
       23.24 

$subtype2
TCGA-A1-A0SE TCGA-A2-A0CP TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0EO TCGA-A2-A0ES 
       43.40        92.48        63.42        53.10        80.25        37.05 
TCGA-A2-A0EX TCGA-A2-A0SU TCGA-A2-A0T7 TCGA-A2-A0YL TCGA-A8-A08O TCGA-A8-A09A 
       24.72        54.61        20.75        14.63        30.97         9.99 
TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A0JA TCGA-AO-A0JB 
       13.02        21.04        80.28        47.84        21.53        50.70 
TCGA-AO-A12C TCGA-AO-A12E TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AU TCGA-B6-A0IE 
       65.52        57.27        43.69        43.53        46.32        65.69 
TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WY TCGA-BH-A0AZ TCGA-BH-A0B1 TCGA-BH-A0DG 
      140.48       157.41       113.75        28.50        37.74        23.44 
TCGA-BH-A0DI TCGA-BH-A0E9 TCGA-BH-A0EI TCGA-C8-A1HI TCGA-E2-A14Q TCGA-E2-A15E 
       22.13        46.19        24.43         0.07        38.24        20.68 
TCGA-E2-A15H TCGA-E2-A1B1 
       12.92        53.03 

$subtype3
TCGA-A1-A0SJ TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04Y TCGA-A2-A0CT TCGA-A2-A0CU 
       14.01        82.16        63.12        36.13        75.22         5.16 
TCGA-A2-A0CW TCGA-A2-A0D4 TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0T3 
       64.01        25.22        74.37        35.05        34.29        18.71 
TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A7-A0CD TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A13F 
       21.63        23.77        38.30        30.58        37.45        12.72 
TCGA-A8-A06O TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Z TCGA-A8-A079 TCGA-A8-A07L 
       13.02        29.00        31.00         1.02         9.01        17.00 
TCGA-A8-A07P TCGA-A8-A07W TCGA-A8-A07Z TCGA-A8-A082 TCGA-A8-A085 TCGA-A8-A086 
       10.98         9.99        28.04        18.05        36.95        13.02 
TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A091 TCGA-A8-A09D TCGA-A8-A09E TCGA-A8-A09K 
       18.05        19.92        19.07        13.02        30.97        29.95 
TCGA-A8-A09M TCGA-A8-A09Q TCGA-A8-A09R TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A 
       15.02        25.02         8.98         0.23         0.62         2.93 
TCGA-AN-A0AK TCGA-AN-A0FD TCGA-AN-A0FF TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ 
        7.33         6.41         4.60         0.36         0.33         0.33 
TCGA-AN-A0XT TCGA-AO-A03P TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03V TCGA-AO-A0J3 
        0.33        84.69        68.75        47.87        29.13        21.40 
TCGA-AO-A0J7 TCGA-AO-A0JI TCGA-AO-A126 TCGA-AO-A12H TCGA-AQ-A04H TCGA-AR-A0TQ 
       20.28        38.53        93.70        28.34        24.79        49.32 
TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-B6-A0IM 
       29.72        24.30        55.86        43.17        83.87       126.12 
TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0WT 
       84.59       110.14        68.45        81.17        78.02       188.68 
TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0X5 TCGA-BH-A0AU TCGA-BH-A0B4 TCGA-BH-A0B8 
       79.63        17.95        68.94        24.53        39.16        51.58 
TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0E2 TCGA-BH-A0GZ 
       42.90        45.80        38.01        13.91        14.30        10.78 
TCGA-BH-A0H0 TCGA-BH-A0H3 TCGA-BH-A0H7 TCGA-BH-A0HB TCGA-BH-A0HW TCGA-BH-A0HX 
       15.16        37.78        23.05        26.50        51.29        27.25 
TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18R TCGA-BH-A1ES TCGA-C8-A1HN TCGA-D8-A140 
       26.66        37.74        37.51       113.82         0.07        13.25 
TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A14O TCGA-E2-A14S 
       43.00        59.41        46.59        40.41        44.65        33.17 
TCGA-E2-A14T TCGA-E2-A14W TCGA-E2-A155 TCGA-E2-A15A TCGA-E2-A15F TCGA-E2-A15O 
       33.30        31.99        21.04        23.34        21.60        12.99 
TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T 
       17.06        14.07        14.99 

$subtype4
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        73.84 
TCGA-A2-A04U TCGA-A2-A0CM TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D2 TCGA-A2-A0ST 
       22.03        24.79        55.00        21.14        33.76        99.19 
TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM 
       50.43        17.52         7.96        18.18        18.58        31.69 
TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A07C TCGA-A8-A07O 
       35.31        12.26         8.78        10.72        19.07         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08R TCGA-A8-A08X TCGA-AN-A04D TCGA-AN-A0AL 
        8.98         9.96         0.99        33.99         1.71         6.48 
TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FX 
        0.16         0.30         0.33         7.92         7.56         0.33 
TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JL 
        0.53         0.33        59.05        17.65        37.48        55.33 
TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12F TCGA-AQ-A04J TCGA-AR-A0TP 
      102.54        94.59        96.10        48.36        26.93        82.88 
TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI 
       37.41        11.84         0.26        53.49        75.55        61.84 
TCGA-AR-A1AJ TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-B6-A0I2 TCGA-B6-A0I6 
       52.73        43.04        17.19        20.19       143.34        32.78 
TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      176.98       140.84       211.53        89.46       131.21        21.47 
TCGA-B6-A0X1 TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BG TCGA-BH-A0BL 
      186.44        38.79        39.55        51.68        24.85        44.02 
TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0RX TCGA-BH-A0WA 
       11.67        48.23         4.37         9.60         5.59        23.05 
TCGA-BH-A18G TCGA-BH-A18K TCGA-BH-A18Q TCGA-BH-A18V TCGA-BH-A1F0 TCGA-D8-A13Y 
        2.01        90.81        55.63        51.12        25.81        11.90 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-E2-A14N TCGA-E2-A14R TCGA-E2-A14X 
       13.97        14.17        19.20        47.15        38.60        31.92 
TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B5 
       28.60        25.41        14.79        25.05        60.53        32.32 

$subtype5
TCGA-A2-A04N TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0D3 TCGA-A2-A0EM TCGA-A2-A0EV 
      104.81        88.57        75.55        28.77       101.69        31.82 
TCGA-A2-A0T5 TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YI TCGA-A7-A0CH 
       17.46        32.52        25.28        15.42        14.50        35.47 
TCGA-A7-A0DB TCGA-A8-A06T TCGA-A8-A06Y TCGA-A8-A07F TCGA-A8-A07S TCGA-A8-A08A 
       33.07        41.06        26.01        18.94         7.96         0.99 
TCGA-A8-A08C TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A099 
       19.96        19.07        93.04        17.92        41.95         9.99 
TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A0A1 TCGA-A8-A0A2 
       12.00         1.02        19.00        15.02        12.00        19.00 
TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AN-A03Y TCGA-AN-A046 TCGA-AN-A0FK 
       13.02        17.00        38.04         0.33         0.33         6.97 
TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XV TCGA-AO-A0J8 TCGA-AO-A125 
       12.33         0.30         0.33         5.33        22.36        99.22 
TCGA-AO-A12A TCGA-AO-A12B TCGA-AO-A12G TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AP 
       90.54        77.56        41.59         5.26        51.22        39.95 
TCGA-AR-A1AS TCGA-AR-A1AW TCGA-B6-A0I5 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC 
       40.83        35.24       149.56       220.87       129.57        50.70 
TCGA-B6-A0IP TCGA-B6-A0RI TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0WZ 
      110.93       234.25       172.96       162.02       102.77       129.57 
TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-BH-A0B5 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BD 
      129.70        28.24        48.36        37.22        32.02        18.21 
TCGA-BH-A0BJ TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0DO 
       21.70        27.16        53.92        45.57        49.94        17.26 
TCGA-BH-A0DP TCGA-BH-A0DT TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0EA TCGA-BH-A0EB 
       15.65        38.47        15.68        44.78        32.65        24.49 
TCGA-BH-A0HA TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HO TCGA-BH-A0HP TCGA-BH-A0HQ 
       52.96        23.90        20.35         2.50        13.61        36.85 
TCGA-BH-A0W3 TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A18I TCGA-BH-A18M TCGA-BH-A18S 
       23.93         5.75        42.35         7.23        72.56        66.05 
TCGA-BH-A1ET TCGA-D8-A146 TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A154 
       82.85        21.14        37.51        28.44        28.87        19.43 
TCGA-E2-A156 TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15G TCGA-E2-A15I TCGA-E2-A15J 
       23.87        22.78        17.26        18.18        17.39        19.36 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15P TCGA-E2-A1B4 TCGA-E2-A1BD 
        9.01        20.58        19.56        29.95        17.10 

$subtype6
TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A0CX TCGA-A2-A0D1 TCGA-A2-A0EY TCGA-A2-A0SW 
       64.04        55.43        56.81        34.55        24.16        44.84 
TCGA-A2-A0T1 TCGA-A2-A0YG TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A075 TCGA-A8-A076 
       17.10        21.86         1.02        17.95        17.00        53.95 
TCGA-A8-A07B TCGA-A8-A084 TCGA-A8-A08B TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A092 
       33.01        15.06        23.08        37.05         9.99        16.01 
TCGA-A8-A09I TCGA-A8-A09N TCGA-A8-A09W TCGA-A8-A09X TCGA-AN-A04C TCGA-AN-A0FT 
       33.07         1.02         0.99        14.01         1.78         6.02 
TCGA-AN-A0FV TCGA-AO-A03N TCGA-AO-A0J2 TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JM 
        0.33        54.08        32.78        72.00        76.73        71.80 
TCGA-AO-A12D TCGA-AQ-A04L TCGA-AR-A0TX TCGA-AR-A0U3 TCGA-AR-A1AT TCGA-B6-A0I8 
       64.04       130.09         0.49        74.40        41.82        24.62 
TCGA-B6-A0I9 TCGA-B6-A0IG TCGA-B6-A0IK TCGA-B6-A0RH TCGA-B6-A0RS TCGA-BH-A0AW 
       12.13       146.50        18.77       188.98       100.67        20.45 
TCGA-BH-A0B7 TCGA-BH-A0BR TCGA-BH-A0C1 TCGA-BH-A0DS TCGA-BH-A0EE TCGA-BH-A0GY 
       56.98        53.65        43.99         2.53        31.00        30.35 
TCGA-BH-A0H9 TCGA-BH-A0HU TCGA-BH-A0HY TCGA-BH-A18P TCGA-BH-A18T TCGA-BH-A18U 
       41.00        12.89        50.76        30.28         7.36        51.39 
TCGA-BH-A1EV TCGA-C8-A12Q TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HL TCGA-D8-A13Z 
       12.00        12.99         0.85         0.23         0.07        20.88 
TCGA-E2-A107 TCGA-E2-A10C TCGA-E2-A14P TCGA-E2-A14V TCGA-E2-A152 TCGA-E2-A1B0 
       34.39        40.08        40.96        34.22        27.12        53.62 

$subtype7
TCGA-A2-A0CL TCGA-A2-A0EQ TCGA-A8-A08I TCGA-A8-A08P TCGA-A8-A0A7 TCGA-AN-A0AJ 
       64.54        79.76        12.00        30.97         0.99         7.99 
TCGA-AO-A03O TCGA-AO-A0JC TCGA-AR-A0TT TCGA-AR-A1AV TCGA-AR-A1AX TCGA-B6-A0WS 
       81.63        50.86        55.20        42.58        36.26        97.48 
TCGA-BH-A0BF TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0H5 TCGA-BH-A0W7 TCGA-C8-A1HM 
       25.68        49.05        41.75        35.51        44.81         0.20 
TCGA-E2-A14Z 
       17.03 

$subtype8
TCGA-A2-A0EN TCGA-A2-A0EW TCGA-A2-A0SY TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0YK 
       89.33        29.72        44.28        20.52        18.90        19.30 
TCGA-A7-A0CG TCGA-A8-A07E TCGA-A8-A07J TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0XL 
       34.29        19.99        12.00         7.17         6.28         0.33 
TCGA-AN-A0XS TCGA-AO-A0J5 TCGA-AO-A0J9 TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JJ 
        0.33        24.16        53.00        21.37        26.24        62.04 
TCGA-AR-A1AL TCGA-B6-A0IH TCGA-B6-A0X7 TCGA-BH-A0AY TCGA-BH-A0B0 TCGA-BH-A0BM 
       48.82       112.37        58.88        25.55        46.92        36.72 
TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DQ TCGA-BH-A0DX 
       35.67        48.69        48.13        31.17         3.22        47.41 
TCGA-BH-A0HK TCGA-BH-A18F TCGA-BH-A1EU TCGA-BH-A1EW TCGA-D8-A145 TCGA-E2-A108 
        5.85         8.81        42.28        55.69        13.48        27.52 
TCGA-E2-A15M TCGA-E2-A1B6 TCGA-E2-A1BC 
        7.69        28.47        16.47 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
    0.30     0.07     0.07     0.16     0.30     0.07     0.20     0.33 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
   91.99   157.41   188.68   211.53   234.25   188.98    97.48   112.37 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 subtype8 
  16.270   43.465   28.040   26.370   26.010   30.675   41.750   27.520 
[1] "0.3 - 92.0 (16.3)"  "0.1 - 157.4 (43.5)" "0.1 - 188.7 (28.0)"
[4] "0.2 - 211.5 (26.4)" "0.3 - 234.2 (26.0)" "0.1 - 189.0 (30.7)"
[7] "0.2 - 97.5 (41.8)"  "0.3 - 112.4 (27.5)"
  [1] "subtype1" "subtype2" "subtype1" "subtype3" "subtype4" "subtype1"
  [7] "subtype4" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [13] "subtype4" "subtype4" "subtype3" "subtype6" "subtype6" "subtype3"
 [19] "subtype7" "subtype4" "subtype2" "subtype5" "subtype5" "subtype3"
 [25] "subtype3" "subtype2" "subtype3" "subtype6" "subtype4" "subtype2"
 [31] "subtype4" "subtype6" "subtype4" "subtype5" "subtype3" "subtype5"
 [37] "subtype8" "subtype2" "subtype7" "subtype3" "subtype2" "subtype3"
 [43] "subtype3" "subtype5" "subtype8" "subtype2" "subtype6" "subtype4"
 [49] "subtype2" "subtype1" "subtype6" "subtype4" "subtype8" "subtype4"
 [55] "subtype6" "subtype4" "subtype3" "subtype8" "subtype5" "subtype8"
 [61] "subtype2" "subtype5" "subtype5" "subtype4" "subtype5" "subtype6"
 [67] "subtype3" "subtype5" "subtype4" "subtype8" "subtype2" "subtype4"
 [73] "subtype3" "subtype3" "subtype4" "subtype8" "subtype5" "subtype3"
 [79] "subtype3" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [85] "subtype3" "subtype1" "subtype6" "subtype6" "subtype5" "subtype3"
 [91] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype3"
 [97] "subtype6" "subtype4" "subtype8" "subtype5" "subtype1" "subtype1"
[103] "subtype8" "subtype3" "subtype4" "subtype3" "subtype4" "subtype5"
[109] "subtype4" "subtype3" "subtype3" "subtype3" "subtype6" "subtype3"
[115] "subtype3" "subtype5" "subtype6" "subtype5" "subtype3" "subtype3"
[121] "subtype7" "subtype6" "subtype6" "subtype2" "subtype7" "subtype4"
[127] "subtype5" "subtype5" "subtype4" "subtype1" "subtype3" "subtype6"
[133] "subtype5" "subtype5" "subtype1" "subtype5" "subtype2" "subtype5"
[139] "subtype5" "subtype3" "subtype3" "subtype6" "subtype3" "subtype3"
[145] "subtype6" "subtype3" "subtype3" "subtype5" "subtype5" "subtype6"
[151] "subtype6" "subtype5" "subtype5" "subtype2" "subtype2" "subtype7"
[157] "subtype5" "subtype5" "subtype5" "subtype1" "subtype5" "subtype3"
[163] "subtype5" "subtype3" "subtype3" "subtype6" "subtype4" "subtype7"
[169] "subtype3" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[175] "subtype3" "subtype3" "subtype4" "subtype5" "subtype4" "subtype8"
[181] "subtype8" "subtype6" "subtype6" "subtype3" "subtype4" "subtype3"
[187] "subtype3" "subtype4" "subtype8" "subtype1" "subtype5" "subtype5"
[193] "subtype5" "subtype8" "subtype3" "subtype4" "subtype5" "subtype1"
[199] "subtype2" "subtype2" "subtype6" "subtype7" "subtype3" "subtype3"
[205] "subtype3" "subtype4" "subtype3" "subtype6" "subtype3" "subtype4"
[211] "subtype8" "subtype4" "subtype3" "subtype5" "subtype8" "subtype2"
[217] "subtype2" "subtype7" "subtype6" "subtype6" "subtype8" "subtype8"
[223] "subtype3" "subtype8" "subtype4" "subtype6" "subtype4" "subtype5"
[229] "subtype3" "subtype4" "subtype4" "subtype5" "subtype5" "subtype2"
[235] "subtype6" "subtype2" "subtype4" "subtype5" "subtype3" "subtype3"
[241] "subtype4" "subtype6" "subtype4" "subtype3" "subtype5" "subtype4"
[247] "subtype7" "subtype4" "subtype3" "subtype3" "subtype6" "subtype3"
[253] "subtype3" "subtype4" "subtype3" "subtype6" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype5" "subtype8" "subtype2" "subtype2"
[265] "subtype5" "subtype4" "subtype4" "subtype5" "subtype6" "subtype2"
[271] "subtype7" "subtype5" "subtype7" "subtype4" "subtype4" "subtype5"
[277] "subtype4" "subtype6" "subtype6" "subtype5" "subtype5" "subtype5"
[283] "subtype2" "subtype6" "subtype8" "subtype4" "subtype6" "subtype3"
[289] "subtype3" "subtype3" "subtype5" "subtype4" "subtype4" "subtype3"
[295] "subtype6" "subtype5" "subtype3" "subtype3" "subtype5" "subtype5"
[301] "subtype5" "subtype2" "subtype6" "subtype4" "subtype4" "subtype2"
[307] "subtype7" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[313] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype8"
[319] "subtype3" "subtype4" "subtype6" "subtype8" "subtype2" "subtype8"
[325] "subtype2" "subtype4" "subtype3" "subtype5" "subtype6" "subtype3"
[331] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[337] "subtype5" "subtype4" "subtype8" "subtype8" "subtype8" "subtype5"
[343] "subtype6" "subtype5" "subtype5" "subtype5" "subtype4" "subtype7"
[349] "subtype7" "subtype6" "subtype8" "subtype3" "subtype3" "subtype8"
[355] "subtype2" "subtype3" "subtype2" "subtype3" "subtype4" "subtype5"
[361] "subtype5" "subtype8" "subtype6" "subtype5" "subtype8" "subtype1"
[367] "subtype4" "subtype5" "subtype3" "subtype4" "subtype5" "subtype2"
[373] "subtype5" "subtype5" "subtype6" "subtype2" "subtype6" "subtype3"
[379] "subtype3" "subtype3" "subtype7" "subtype1" "subtype3" "subtype6"
[385] "subtype5" "subtype3" "subtype5" "subtype5" "subtype8" "subtype5"
[391] "subtype5" "subtype5" "subtype6" "subtype3" "subtype3" "subtype6"
[397] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[403] "subtype8" "subtype4" "subtype5" "subtype1" "subtype4" "subtype3"
[409] "subtype5" "subtype3" "subtype6" "subtype4" "subtype3" "subtype5"
[415] "subtype6" "subtype6" "subtype4" "subtype1" "subtype3" "subtype5"
[421] "subtype8" "subtype6" "subtype8" "subtype4" "subtype6" "subtype6"
[427] "subtype6" "subtype2" "subtype6" "subtype7" "subtype3" "subtype4"
[433] "subtype6" "subtype3" "subtype1" "subtype4" "subtype4" "subtype8"
[439] "subtype5" "subtype4" "subtype3" "subtype3" "subtype6" "subtype8"
[445] "subtype3" "subtype3" "subtype5" "subtype6" "subtype5" "subtype5"
[451] "subtype4" "subtype3" "subtype6" "subtype2" "subtype4" "subtype3"
[457] "subtype3" "subtype6" "subtype3" "subtype4" "subtype4" "subtype7"
[463] "subtype4" "subtype6" "subtype1" "subtype5" "subtype3" "subtype5"
[469] "subtype4" "subtype4" "subtype3" "subtype5" "subtype5" "subtype2"
[475] "subtype3" "subtype5" "subtype2" "subtype5" "subtype5" "subtype5"
[481] "subtype5" "subtype8" "subtype3" "subtype5" "subtype3" "subtype3"
[487] "subtype3" "subtype4" "subtype6" "subtype2" "subtype5" "subtype4"
[493] "subtype8" "subtype8" "subtype5"
  [1] "subtype1" "subtype2" "subtype1" "subtype3" "subtype4" "subtype1"
  [7] "subtype4" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [13] "subtype4" "subtype4" "subtype3" "subtype6" "subtype6" "subtype3"
 [19] "subtype7" "subtype4" "subtype2" "subtype5" "subtype5" "subtype3"
 [25] "subtype3" "subtype2" "subtype3" "subtype6" "subtype4" "subtype2"
 [31] "subtype4" "subtype6" "subtype4" "subtype5" "subtype3" "subtype5"
 [37] "subtype8" "subtype2" "subtype7" "subtype3" "subtype2" "subtype3"
 [43] "subtype3" "subtype5" "subtype8" "subtype2" "subtype6" "subtype4"
 [49] "subtype2" "subtype1" "subtype6" "subtype4" "subtype8" "subtype4"
 [55] "subtype6" "subtype4" "subtype3" "subtype8" "subtype5" "subtype8"
 [61] "subtype2" "subtype5" "subtype5" "subtype4" "subtype5" "subtype6"
 [67] "subtype3" "subtype5" "subtype4" "subtype8" "subtype2" "subtype4"
 [73] "subtype3" "subtype3" "subtype4" "subtype8" "subtype5" "subtype3"
 [79] "subtype3" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [85] "subtype3" "subtype1" "subtype6" "subtype6" "subtype5" "subtype3"
 [91] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype3"
 [97] "subtype6" "subtype4" "subtype8" "subtype5" "subtype1" "subtype1"
[103] "subtype8" "subtype3" "subtype4" "subtype3" "subtype4" "subtype5"
[109] "subtype4" "subtype3" "subtype3" "subtype3" "subtype6" "subtype3"
[115] "subtype3" "subtype5" "subtype6" "subtype5" "subtype3" "subtype3"
[121] "subtype7" "subtype6" "subtype6" "subtype2" "subtype7" "subtype4"
[127] "subtype5" "subtype5" "subtype4" "subtype1" "subtype3" "subtype6"
[133] "subtype5" "subtype5" "subtype1" "subtype5" "subtype2" "subtype5"
[139] "subtype5" "subtype3" "subtype3" "subtype6" "subtype3" "subtype3"
[145] "subtype6" "subtype3" "subtype3" "subtype5" "subtype5" "subtype6"
[151] "subtype6" "subtype5" "subtype5" "subtype2" "subtype2" "subtype7"
[157] "subtype5" "subtype5" "subtype5" "subtype1" "subtype5" "subtype3"
[163] "subtype5" "subtype3" "subtype3" "subtype6" "subtype4" "subtype7"
[169] "subtype3" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[175] "subtype3" "subtype3" "subtype4" "subtype5" "subtype4" "subtype8"
[181] "subtype8" "subtype6" "subtype6" "subtype3" "subtype4" "subtype3"
[187] "subtype3" "subtype4" "subtype8" "subtype1" "subtype5" "subtype5"
[193] "subtype5" "subtype8" "subtype3" "subtype4" "subtype5" "subtype1"
[199] "subtype2" "subtype2" "subtype6" "subtype7" "subtype3" "subtype3"
[205] "subtype3" "subtype4" "subtype3" "subtype6" "subtype3" "subtype4"
[211] "subtype8" "subtype4" "subtype3" "subtype5" "subtype8" "subtype2"
[217] "subtype2" "subtype7" "subtype6" "subtype6" "subtype8" "subtype8"
[223] "subtype3" "subtype8" "subtype4" "subtype6" "subtype4" "subtype5"
[229] "subtype3" "subtype4" "subtype4" "subtype5" "subtype5" "subtype2"
[235] "subtype6" "subtype2" "subtype4" "subtype5" "subtype3" "subtype3"
[241] "subtype4" "subtype6" "subtype4" "subtype3" "subtype5" "subtype4"
[247] "subtype7" "subtype4" "subtype3" "subtype3" "subtype6" "subtype3"
[253] "subtype3" "subtype4" "subtype3" "subtype6" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype5" "subtype8" "subtype2" "subtype2"
[265] "subtype5" "subtype4" "subtype4" "subtype5" "subtype6" "subtype2"
[271] "subtype7" "subtype5" "subtype7" "subtype4" "subtype4" "subtype5"
[277] "subtype4" "subtype6" "subtype6" "subtype5" "subtype5" "subtype5"
[283] "subtype2" "subtype6" "subtype8" "subtype4" "subtype6" "subtype3"
[289] "subtype3" "subtype3" "subtype5" "subtype4" "subtype4" "subtype3"
[295] "subtype6" "subtype5" "subtype3" "subtype3" "subtype5" "subtype5"
[301] "subtype5" "subtype2" "subtype6" "subtype4" "subtype4" "subtype2"
[307] "subtype7" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[313] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype8"
[319] "subtype3" "subtype4" "subtype6" "subtype8" "subtype2" "subtype8"
[325] "subtype2" "subtype4" "subtype3" "subtype5" "subtype6" "subtype3"
[331] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[337] "subtype5" "subtype4" "subtype8" "subtype8" "subtype8" "subtype5"
[343] "subtype6" "subtype5" "subtype5" "subtype5" "subtype4" "subtype7"
[349] "subtype7" "subtype6" "subtype8" "subtype3" "subtype3" "subtype8"
[355] "subtype2" "subtype3" "subtype2" "subtype3" "subtype4" "subtype5"
[361] "subtype5" "subtype8" "subtype6" "subtype5" "subtype8" "subtype1"
[367] "subtype4" "subtype5" "subtype3" "subtype4" "subtype5" "subtype2"
[373] "subtype5" "subtype5" "subtype6" "subtype2" "subtype6" "subtype3"
[379] "subtype3" "subtype3" "subtype7" "subtype1" "subtype3" "subtype6"
[385] "subtype5" "subtype3" "subtype5" "subtype5" "subtype8" "subtype5"
[391] "subtype5" "subtype5" "subtype6" "subtype3" "subtype3" "subtype6"
[397] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[403] "subtype8" "subtype4" "subtype5" "subtype1" "subtype4" "subtype3"
[409] "subtype5" "subtype3" "subtype6" "subtype4" "subtype3" "subtype5"
[415] "subtype6" "subtype6" "subtype4" "subtype1" "subtype3" "subtype5"
[421] "subtype8" "subtype6" "subtype8" "subtype4" "subtype6" "subtype6"
[427] "subtype6" "subtype2" "subtype6" "subtype7" "subtype3" "subtype4"
[433] "subtype6" "subtype3" "subtype1" "subtype4" "subtype4" "subtype8"
[439] "subtype5" "subtype4" "subtype3" "subtype3" "subtype6" "subtype8"
[445] "subtype3" "subtype3" "subtype5" "subtype6" "subtype5" "subtype5"
[451] "subtype4" "subtype3" "subtype6" "subtype2" "subtype4" "subtype3"
[457] "subtype3" "subtype6" "subtype3" "subtype4" "subtype4" "subtype7"
[463] "subtype4" "subtype6" "subtype1" "subtype5" "subtype3" "subtype5"
[469] "subtype4" "subtype4" "subtype3" "subtype5" "subtype5" "subtype2"
[475] "subtype3" "subtype5" "subtype2" "subtype5" "subtype5" "subtype5"
[481] "subtype5" "subtype8" "subtype3" "subtype5" "subtype3" "subtype3"
[487] "subtype3" "subtype4" "subtype6" "subtype2" "subtype5" "subtype4"
[493] "subtype8" "subtype8" "subtype5"
  [1] "subtype1" "subtype2" "subtype1" "subtype3" "subtype4" "subtype1"
  [7] "subtype4" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [13] "subtype4" "subtype4" "subtype3" "subtype6" "subtype6" "subtype3"
 [19] "subtype7" "subtype4" "subtype2" "subtype5" "subtype5" "subtype3"
 [25] "subtype3" "subtype2" "subtype3" "subtype6" "subtype4" "subtype2"
 [31] "subtype4" "subtype6" "subtype4" "subtype5" "subtype3" "subtype5"
 [37] "subtype8" "subtype2" "subtype7" "subtype3" "subtype2" "subtype3"
 [43] "subtype3" "subtype5" "subtype8" "subtype2" "subtype6" "subtype4"
 [49] "subtype2" "subtype1" "subtype6" "subtype4" "subtype8" "subtype4"
 [55] "subtype6" "subtype4" "subtype3" "subtype8" "subtype5" "subtype8"
 [61] "subtype2" "subtype5" "subtype5" "subtype4" "subtype5" "subtype6"
 [67] "subtype3" "subtype5" "subtype4" "subtype8" "subtype2" "subtype4"
 [73] "subtype3" "subtype3" "subtype4" "subtype8" "subtype5" "subtype3"
 [79] "subtype3" "subtype4" "subtype5" "subtype4" "subtype4" "subtype3"
 [85] "subtype3" "subtype1" "subtype6" "subtype6" "subtype5" "subtype3"
 [91] "subtype3" "subtype5" "subtype3" "subtype6" "subtype6" "subtype3"
 [97] "subtype6" "subtype4" "subtype8" "subtype5" "subtype1" "subtype1"
[103] "subtype8" "subtype3" "subtype4" "subtype3" "subtype4" "subtype5"
[109] "subtype4" "subtype3" "subtype3" "subtype3" "subtype6" "subtype3"
[115] "subtype3" "subtype5" "subtype6" "subtype5" "subtype3" "subtype3"
[121] "subtype7" "subtype6" "subtype6" "subtype2" "subtype7" "subtype4"
[127] "subtype5" "subtype5" "subtype4" "subtype1" "subtype3" "subtype6"
[133] "subtype5" "subtype5" "subtype1" "subtype5" "subtype2" "subtype5"
[139] "subtype5" "subtype3" "subtype3" "subtype6" "subtype3" "subtype3"
[145] "subtype6" "subtype3" "subtype3" "subtype5" "subtype5" "subtype6"
[151] "subtype6" "subtype5" "subtype5" "subtype2" "subtype2" "subtype7"
[157] "subtype5" "subtype5" "subtype5" "subtype1" "subtype5" "subtype3"
[163] "subtype5" "subtype3" "subtype3" "subtype6" "subtype4" "subtype7"
[169] "subtype3" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[175] "subtype3" "subtype3" "subtype4" "subtype5" "subtype4" "subtype8"
[181] "subtype8" "subtype6" "subtype6" "subtype3" "subtype4" "subtype3"
[187] "subtype3" "subtype4" "subtype8" "subtype1" "subtype5" "subtype5"
[193] "subtype5" "subtype8" "subtype3" "subtype4" "subtype5" "subtype1"
[199] "subtype2" "subtype2" "subtype6" "subtype7" "subtype3" "subtype3"
[205] "subtype3" "subtype4" "subtype3" "subtype6" "subtype3" "subtype4"
[211] "subtype8" "subtype4" "subtype3" "subtype5" "subtype8" "subtype2"
[217] "subtype2" "subtype7" "subtype6" "subtype6" "subtype8" "subtype8"
[223] "subtype3" "subtype8" "subtype4" "subtype6" "subtype4" "subtype5"
[229] "subtype3" "subtype4" "subtype4" "subtype5" "subtype5" "subtype2"
[235] "subtype6" "subtype2" "subtype4" "subtype5" "subtype3" "subtype3"
[241] "subtype4" "subtype6" "subtype4" "subtype3" "subtype5" "subtype4"
[247] "subtype7" "subtype4" "subtype3" "subtype3" "subtype6" "subtype3"
[253] "subtype3" "subtype4" "subtype3" "subtype6" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype5" "subtype8" "subtype2" "subtype2"
[265] "subtype5" "subtype4" "subtype4" "subtype5" "subtype6" "subtype2"
[271] "subtype7" "subtype5" "subtype7" "subtype4" "subtype4" "subtype5"
[277] "subtype4" "subtype6" "subtype6" "subtype5" "subtype5" "subtype5"
[283] "subtype2" "subtype6" "subtype8" "subtype4" "subtype6" "subtype3"
[289] "subtype3" "subtype3" "subtype5" "subtype4" "subtype4" "subtype3"
[295] "subtype6" "subtype5" "subtype3" "subtype3" "subtype5" "subtype5"
[301] "subtype5" "subtype2" "subtype6" "subtype4" "subtype4" "subtype2"
[307] "subtype7" "subtype3" "subtype3" "subtype3" "subtype4" "subtype2"
[313] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype8"
[319] "subtype3" "subtype4" "subtype6" "subtype8" "subtype2" "subtype8"
[325] "subtype2" "subtype4" "subtype3" "subtype5" "subtype6" "subtype3"
[331] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[337] "subtype5" "subtype4" "subtype8" "subtype8" "subtype8" "subtype5"
[343] "subtype6" "subtype5" "subtype5" "subtype5" "subtype4" "subtype7"
[349] "subtype7" "subtype6" "subtype8" "subtype3" "subtype3" "subtype8"
[355] "subtype2" "subtype3" "subtype2" "subtype3" "subtype4" "subtype5"
[361] "subtype5" "subtype8" "subtype6" "subtype5" "subtype8" "subtype1"
[367] "subtype4" "subtype5" "subtype3" "subtype4" "subtype5" "subtype2"
[373] "subtype5" "subtype5" "subtype6" "subtype2" "subtype6" "subtype3"
[379] "subtype3" "subtype3" "subtype7" "subtype1" "subtype3" "subtype6"
[385] "subtype5" "subtype3" "subtype5" "subtype5" "subtype8" "subtype5"
[391] "subtype5" "subtype5" "subtype6" "subtype3" "subtype3" "subtype6"
[397] "subtype4" "subtype5" "subtype5" "subtype5" "subtype7" "subtype4"
[403] "subtype8" "subtype4" "subtype5" "subtype1" "subtype4" "subtype3"
[409] "subtype5" "subtype3" "subtype6" "subtype4" "subtype3" "subtype5"
[415] "subtype6" "subtype6" "subtype4" "subtype1" "subtype3" "subtype5"
[421] "subtype8" "subtype6" "subtype8" "subtype4" "subtype6" "subtype6"
[427] "subtype6" "subtype2" "subtype6" "subtype7" "subtype3" "subtype4"
[433] "subtype6" "subtype3" "subtype1" "subtype4" "subtype4" "subtype8"
[439] "subtype5" "subtype4" "subtype3" "subtype3" "subtype6" "subtype8"
[445] "subtype3" "subtype3" "subtype5" "subtype6" "subtype5" "subtype5"
[451] "subtype4" "subtype3" "subtype6" "subtype2" "subtype4" "subtype3"
[457] "subtype3" "subtype6" "subtype3" "subtype4" "subtype4" "subtype7"
[463] "subtype4" "subtype6" "subtype1" "subtype5" "subtype3" "subtype5"
[469] "subtype4" "subtype4" "subtype3" "subtype5" "subtype5" "subtype2"
[475] "subtype3" "subtype5" "subtype2" "subtype5" "subtype5" "subtype5"
[481] "subtype5" "subtype8" "subtype3" "subtype5" "subtype3" "subtype3"
[487] "subtype3" "subtype4" "subtype6" "subtype2" "subtype5" "subtype4"
[493] "subtype8" "subtype8" "subtype5"
D1V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1       1        0        0         8         3          5          1
  subtype2       1        3        0        12        10          8          0
  subtype3       8        6        4        36        34         20          6
  subtype4       8       10        0        45        19          9          1
  subtype5      14       14        0        43        15         10          5
  subtype6       4        2        0        21        19         15          2
  subtype7       4        1        0         6         4          4          0
  subtype8       6        1        2        14         6          6          0
          vv
clus       STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1          0        2         0       1
  subtype2          2        1         1       1
  subtype3          3        1         0       3
  subtype4          4        3         0       2
  subtype5          2        3         0       4
  subtype6          6        3         0       2
  subtype7          0        0         0       1
  subtype8          2        1         0       2
D1V3, multiclass
          vv
clus       T1 T2 T3 T4
  subtype1  6 13  0  2
  subtype2  8 21  9  0
  subtype3 25 75 14  6
  subtype4 23 67  8  2
  subtype5 40 55  9  6
  subtype6 11 49 12  2
  subtype7  7 10  3  0
  subtype8 13 21  4  2
D1V4, multiclass
          vv
clus       N0 N1 N2 N3
  subtype1  6  6  7  1
  subtype2 14 16  5  3
  subtype3 49 50 14  4
  subtype4 64 24  8  5
  subtype5 66 31  7  5
  subtype6 24 26 14  8
  subtype7 11  5  3  0
  subtype8 21 12  3  3
D1V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0  19   2   0
  subtype2        1  37   1   0
  subtype3        0 116   1   4
  subtype4        0  97   3   1
  subtype5        1 101   3   5
  subtype6        0  70   3   1
  subtype7        0  19   0   1
  subtype8        0  37   1   2
D1V6, multiclass
D1V7, binary
          cls
clus         0   1
  subtype1  20   1
  subtype2  39   0
  subtype3 117   4
  subtype4 101   0
  subtype5 110   0
  subtype6  74   0
  subtype7  19   1
  subtype8  40   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   20    1
  subtype2   39    0
  subtype3  117    4
  subtype4  101    0
  subtype5  110    0
  subtype6   74    0
  subtype7   19    1
  subtype8   40    0
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                            20                              0
  subtype2                            28                              8
  subtype3                           113                              1
  subtype4                            92                              1
  subtype5                            85                             14
  subtype6                            67                              5
  subtype7                            19                              1
  subtype8                            24                             11
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                                0
  subtype2                   0                                3
  subtype3                   0                                1
  subtype4                   1                                0
  subtype5                   0                                5
  subtype6                   0                                0
  subtype7                   0                                0
  subtype8                   0                                3
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  0              1
  subtype2                  0              0
  subtype3                  1              5
  subtype4                  0              6
  subtype5                  1              5
  subtype6                  0              2
  subtype7                  0              0
  subtype8                  0              2
D1V8, multiclass
D1V9, binary
          cls
clus        0  1
  subtype1  3 18
  subtype2 13 26
  subtype3 32 89
  subtype4 37 64
  subtype5 31 79
  subtype6 21 53
  subtype7  5 15
  subtype8 12 28
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    3   18
  subtype2   13   26
  subtype3   32   89
  subtype4   37   64
  subtype5   31   79
  subtype6   21   53
  subtype7    5   15
  subtype8   12   28
D1V10, continuous

Clustering(2) Variable = MRNA_CHIERARCHICAL
D2V1, survival
          sevent
clus2        0   1
  subtype1 107  15
  subtype2 101  20
  subtype3 215  37
subtype1 subtype2 subtype3 
     122      121      252 
subtype1 subtype2 subtype3 
      15       20       37 
$subtype1
TCGA-A1-A0SE TCGA-A2-A04N TCGA-A2-A0CL TCGA-A2-A0CP TCGA-A2-A0CV TCGA-A2-A0CZ 
       43.40       104.81        64.54        92.48        63.42        53.10 
TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0ES TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX 
       89.33        80.25        37.05        31.82        29.72        24.72 
TCGA-A2-A0SY TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0YD TCGA-A2-A0YI TCGA-A2-A0YK 
       44.28        20.52        18.90        25.28        14.50        19.30 
TCGA-A2-A0YL TCGA-A7-A0CG TCGA-A7-A0DB TCGA-A8-A07E TCGA-A8-A07J TCGA-A8-A08O 
       14.63        34.29        33.07        19.99        12.00        30.97 
TCGA-A8-A08Z TCGA-A8-A09A TCGA-A8-A09D TCGA-A8-A0A1 TCGA-A8-A0A4 TCGA-A8-A0A6 
       40.01         9.99        13.02        12.00        13.02        21.04 
TCGA-AN-A046 TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0FW TCGA-AN-A0XL TCGA-AN-A0XS 
        0.33         7.17         6.28         0.36         0.33         0.33 
TCGA-AN-A0XV TCGA-AO-A03M TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A0J5 TCGA-AO-A0J9 
        5.33        47.84        68.75        47.87        24.16        53.00 
TCGA-AO-A0JA TCGA-AO-A0JB TCGA-AO-A0JC TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JJ 
       21.53        50.70        50.86        21.37        26.24        62.04 
TCGA-AO-A12A TCGA-AO-A12E TCGA-AR-A0TT TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AN 
       90.54        57.27        55.20        51.22        48.82        43.69 
TCGA-AR-A1AP TCGA-AR-A1AU TCGA-AR-A1AV TCGA-AR-A1AX TCGA-B6-A0IE TCGA-B6-A0IH 
       39.95        46.32        42.58        36.26        65.69       112.37 
TCGA-B6-A0IN TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-BH-A0AY 
       84.59       140.48       157.41       113.75        58.88        25.55 
TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0BC TCGA-BH-A0BD 
       28.50        46.92        39.16        48.36        32.02        18.21 
TCGA-BH-A0BF TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ 
       25.68        21.70        36.72        35.67        48.69        27.16 
TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DO 
       48.13        31.17        23.44        22.13        13.91        17.26 
TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0DX TCGA-BH-A0E9 
       15.65         3.22         2.53        38.47        47.41        46.19 
TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0H5 TCGA-BH-A0HA TCGA-BH-A0HF TCGA-BH-A0HK 
       32.65        24.43        35.51        52.96        23.90         5.85 
TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18F 
       13.61        36.85         5.75        42.35        44.81         8.81 
TCGA-BH-A18I TCGA-BH-A18M TCGA-BH-A1EO TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EW 
        7.23        72.56        91.99        82.85        42.28        55.69 
TCGA-D8-A141 TCGA-D8-A145 TCGA-D8-A146 TCGA-E2-A108 TCGA-E2-A10F TCGA-E2-A14Z 
       20.58        13.48        21.14        27.52        28.87        17.03 
TCGA-E2-A15C TCGA-E2-A15E TCGA-E2-A15I TCGA-E2-A15M TCGA-E2-A15P TCGA-E2-A1B1 
       22.78        20.68        17.39         7.69        19.56        53.03 
TCGA-E2-A1B6 TCGA-E2-A1BC 
       28.47        16.47 

$subtype2
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        73.84 
TCGA-A2-A04U TCGA-A2-A04X TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0CY TCGA-A2-A0D0 
       22.03        55.43        24.79        56.81        55.00        21.14 
TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0ST TCGA-A2-A0SW TCGA-A2-A0SX 
       34.55        33.76        79.76        99.19        44.84        50.43 
TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM 
       17.52        17.10         7.96        18.18        18.58        31.69 
TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A07C TCGA-A8-A07O 
       35.31        12.26         8.78        10.72        19.07         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08L TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09X 
        8.98         9.96         9.99         0.99        33.99        14.01 
TCGA-A8-A0A7 TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AR TCGA-AN-A0AT 
        0.99         1.78         1.71         6.48         0.30         0.33 
TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FX TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U 
        7.92         7.56         0.33         0.53         0.33        59.05 
TCGA-AO-A0J2 TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 
       32.78        17.65        37.48        76.73        55.33       102.54 
TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F TCGA-AQ-A04J TCGA-AR-A0TP 
       94.59        96.10        64.04        48.36        26.93        82.88 
TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH 
       37.41        11.84         0.49         0.26        53.49        75.55 
TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AT 
       61.84        52.73        43.53        43.04        17.19        41.82 
TCGA-AR-A1AY TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IQ 
       20.19       143.34        32.78       176.98        18.77       140.84 
TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0X1 
      211.53       100.67        89.46       131.21        21.47       186.44 
TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BG 
       38.79        20.45        39.55        56.98        51.68        24.85 
TCGA-BH-A0BL TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 
       44.02        53.65        11.67        48.23         4.37         9.60 
TCGA-BH-A0EE TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18K TCGA-BH-A18Q 
       31.00         5.59        23.05         2.01        90.81        55.63 
TCGA-BH-A18V TCGA-BH-A1F0 TCGA-C8-A12Q TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 
       51.12        25.81        12.99        11.90        20.88        13.97 
TCGA-D8-A143 TCGA-D8-A147 TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14X 
       14.17        19.20        47.15        40.96        38.60        31.92 
TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 
       28.60        25.41        14.79        25.05        60.53        53.62 
TCGA-E2-A1B5 
       32.32 

$subtype3
TCGA-A1-A0SD TCGA-A1-A0SH TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A2-A04R TCGA-A2-A04V 
       14.37        47.24        14.01         7.96        82.16        63.12 
TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU 
       64.04        36.13        88.57        75.55        75.22         5.16 
TCGA-A2-A0CW TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EM TCGA-A2-A0ER TCGA-A2-A0ET 
       64.01        28.77        25.22       101.69        74.37        35.05 
TCGA-A2-A0EU TCGA-A2-A0EY TCGA-A2-A0SU TCGA-A2-A0SV TCGA-A2-A0T3 TCGA-A2-A0T5 
       34.29        24.16        54.61        27.12        18.71        17.46 
TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT 
       20.75        32.52        15.42        21.86        21.63        23.77 
TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A13F TCGA-A8-A06O 
       38.30        35.47        30.58        37.45        12.72        13.02 
TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06X 
       13.02         1.02        17.95        41.06        29.00        31.00 
TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B 
       26.01         1.02        17.00        53.95         9.01        33.01 
TCGA-A8-A07F TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S 
       18.94        18.94        14.01        17.00        10.98         7.96 
TCGA-A8-A07W TCGA-A8-A07Z TCGA-A8-A082 TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 
        9.99        28.04        18.05        15.06        36.95        13.02 
TCGA-A8-A08A TCGA-A8-A08B TCGA-A8-A08C TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I 
        0.99        23.08        19.96        18.05        19.92        12.00 
TCGA-A8-A08J TCGA-A8-A08P TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A091 TCGA-A8-A092 
       37.05        30.97        19.07        93.04        19.07        16.01 
TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A097 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C 
       17.92        41.95        12.00         9.99        12.00         1.02 
TCGA-A8-A09E TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q 
       30.97        33.07        29.95        15.02         1.02        25.02 
TCGA-A8-A09R TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09W TCGA-A8-A0A2 TCGA-A8-A0A9 
        8.98        19.00        15.02         0.99        19.00        13.02 
TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A049 
       17.00        38.04         0.33         0.33         0.23         0.62 
TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD 
        2.93         7.99         7.33         0.16         0.30         6.41 
TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FY TCGA-AN-A0FZ 
        4.60         6.97         6.02         0.33         0.33         0.33 
TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XT TCGA-AN-A0XW 
        0.33        12.33         0.30         0.33         0.33         5.59 
TCGA-AO-A03L TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A03V TCGA-AO-A0J3 
       80.28        54.08        81.63        84.69        29.13        21.40 
TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0JD TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A125 
       20.28        22.36        72.00        38.53        71.80        99.22 
TCGA-AO-A126 TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H TCGA-AQ-A04H 
       93.70        77.56        65.52        41.59        28.34        24.79 
TCGA-AQ-A04L TCGA-AR-A0TQ TCGA-AR-A0TR TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY 
      130.09        49.32         5.26        29.72        24.30        55.86 
TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AS TCGA-AR-A1AW TCGA-B6-A0I5 
       43.17        83.87        74.40        40.83        35.24       149.56 
TCGA-B6-A0I8 TCGA-B6-A0I9 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IG 
       24.62        12.13       220.87       129.57        50.70       146.50 
TCGA-B6-A0IM TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0RG TCGA-B6-A0RH TCGA-B6-A0RI 
      126.12       110.14       110.93        68.45       188.98       234.25 
TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0WS 
       81.17        78.02       172.96       162.02       102.77        97.48 
TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 
      188.68        79.63        17.95       129.57       129.70        28.24 
TCGA-B6-A0X5 TCGA-BH-A0AU TCGA-BH-A0B1 TCGA-BH-A0B8 TCGA-BH-A0BA TCGA-BH-A0BS 
       68.94        24.53        37.74        51.58        37.22        53.92 
TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0C1 TCGA-BH-A0C7 
       45.57        49.94        49.05        41.75        43.99        42.90 
TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DZ TCGA-BH-A0E1 TCGA-BH-A0E2 TCGA-BH-A0E7 
       45.80        38.01        16.27        15.68        14.30        44.78 
TCGA-BH-A0EB TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H3 TCGA-BH-A0H6 
       24.49        30.35        10.78        15.16        37.78        24.56 
TCGA-BH-A0H7 TCGA-BH-A0H9 TCGA-BH-A0HB TCGA-BH-A0HI TCGA-BH-A0HO TCGA-BH-A0HU 
       23.05        41.00        26.50        20.35         2.50        12.89 
TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A18J TCGA-BH-A18L 
       51.29        27.25        50.76        23.93        20.09        26.66 
TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A18T TCGA-BH-A18U 
       37.74        30.28        37.51        66.05         7.36        51.39 
TCGA-BH-A1ES TCGA-BH-A1EV TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HI TCGA-C8-A1HL 
      113.82        12.00         0.85         0.23         0.07         0.07 
TCGA-C8-A1HM TCGA-C8-A1HN TCGA-D8-A140 TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A107 
        0.20         0.07        13.25        43.00        59.41        34.39 
TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A14O 
       46.59        40.41        37.51        40.08        28.44        44.65 
TCGA-E2-A14Q TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A152 
       38.24        33.17        33.30        34.22        31.99        27.12 
TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15D 
       23.24        19.43        21.04        23.87        23.34        17.26 
TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L 
       21.60        18.18        12.92        19.36         9.01        20.58 
TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BD 
       12.99        17.06        14.07        14.99        29.95        17.10 

subtype1 subtype2 subtype3 
    0.33     0.26     0.07 
subtype1 subtype2 subtype3 
  157.41   211.53   234.25 
subtype1 subtype2 subtype3 
  31.495   31.000   25.615 
[1] "0.3 - 157.4 (31.5)" "0.3 - 211.5 (31.0)" "0.1 - 234.2 (25.6)"
  [1] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [79] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[103] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[169] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[211] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[313] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[331] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[367] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[385] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[433] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[439] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[451] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[457] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[463] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[469] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[475] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[481] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[487] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[493] "subtype1" "subtype1" "subtype3"
  [1] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [79] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[103] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[169] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[211] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[313] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[331] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[367] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[385] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[433] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[439] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[451] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[457] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[463] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[469] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[475] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[481] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[487] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[493] "subtype1" "subtype1" "subtype3"
  [1] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [79] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[103] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[169] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[187] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[199] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[211] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[229] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[241] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[295] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[313] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[331] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[337] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[355] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[367] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[379] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[385] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[421] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[427] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[433] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[439] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[451] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[457] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[463] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[469] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[475] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[481] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[487] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[493] "subtype1" "subtype1" "subtype3"
D2V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1      18        9        2        38        22         21          1
  subtype2       9       11        0        56        25         13          2
  subtype3      19       17        4        91        63         43         12
          vv
clus       STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1          5        2         1       5
  subtype2          8        4         0       3
  subtype3          6        8         0       8
D2V3, multiclass
          vv
clus        T1  T2  T3  T4
  subtype1  43  60  17   3
  subtype2  30  85  12   3
  subtype3  60 166  30  14
D2V4, multiclass
          vv
clus        N0  N1  N2  N3
  subtype1  62  37  14   8
  subtype2  74  34  14   9
  subtype3 119  99  33  12
D2V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        2 116   2   4
  subtype2        0 126   4   1
  subtype3        0 254   8   9
D2V6, multiclass
D2V7, binary
          cls
clus         0   1
  subtype1 122   2
  subtype2 131   0
  subtype3 267   4
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  122    2
  subtype2  131    0
  subtype3  267    4
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      122      131      267
  MALE          2        0        4
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                            88                             26
  subtype2                           119                              4
  subtype3                           241                             11
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                                6
  subtype2                   1                                0
  subtype3                   0                                6
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  0              4
  subtype2                  0              6
  subtype3                  2             11
D2V8, multiclass
D2V9, binary
          cls
clus         0   1
  subtype1  38  86
  subtype2  49  82
  subtype3  67 204
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   38   86
  subtype2   49   82
  subtype3   67  204
     clus
vv    subtype1 subtype2 subtype3
  NO        38       49       67
  YES       86       82      204
D2V10, continuous

Clustering(3) Variable = CN_CNMF
D3V1, survival
          sevent
clus2        0   1
  subtype1 307  34
  subtype2 187  25
  subtype3  63   9
  subtype4 193  32
  subtype5  36   9
subtype1 subtype2 subtype3 subtype4 subtype5 
     341      212       72      225       45 
subtype1 subtype2 subtype3 subtype4 subtype5 
      34       25        9       32        9 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SH TCGA-A2-A04N TCGA-A2-A04Q 
        8.52        48.10        14.24        47.24       104.81        41.92 
TCGA-A2-A04V TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CK TCGA-A2-A0CL TCGA-A2-A0CO 
       63.12        64.04        36.13       125.56        64.54       112.04 
TCGA-A2-A0CP TCGA-A2-A0CQ TCGA-A2-A0CR TCGA-A2-A0D3 TCGA-A2-A0EM TCGA-A2-A0EN 
       92.48        88.57       107.93        28.77       101.69        89.33 
TCGA-A2-A0EO TCGA-A2-A0EP TCGA-A2-A0ES TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0ST 
       80.25       107.61        37.05        29.72        24.72        99.19 
TCGA-A2-A0SU TCGA-A2-A0SY TCGA-A2-A0T1 TCGA-A2-A0T5 TCGA-A2-A0T6 TCGA-A2-A0YC 
       54.61        44.28        17.10        17.46        18.90        32.52 
TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL 
       25.28        15.42        21.63        14.50        19.30        14.63 
TCGA-A2-A1FZ TCGA-A2-A1G4 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A25C 
       22.45        19.56        16.47        52.44       107.70        17.19 
TCGA-A2-A25F TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A3XV TCGA-A2-A3XW TCGA-A2-A3XZ 
       10.59        20.88        39.62        14.07        49.48        31.96 
TCGA-A2-A4RX TCGA-A2-A4RY TCGA-A2-A4S0 TCGA-A2-A4S1 TCGA-A7-A0CG TCGA-A7-A0CH 
        9.01         8.81         8.91        12.00        34.29        35.47 
TCGA-A7-A13G TCGA-A7-A13H TCGA-A7-A26E TCGA-A7-A26F TCGA-A7-A26H TCGA-A7-A3IY 
       11.44        29.56        13.84        15.09        13.12         4.96 
TCGA-A7-A3J0 TCGA-A7-A3J1 TCGA-A7-A3RF TCGA-A7-A426 TCGA-A8-A06P TCGA-A8-A07E 
        2.50        11.28        13.41        11.97        13.02        19.99 
TCGA-A8-A07J TCGA-A8-A07S TCGA-A8-A08A TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A095 
       12.00         7.96         0.99        93.04        40.01        41.95 
TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A09X TCGA-A8-A0A1 TCGA-A8-A0A7 TCGA-A8-A0AD 
       19.00        15.02        14.01        12.00         0.99        38.04 
TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A2FK 
       10.82         1.45         1.45        55.40        36.99        38.79 
TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AC-A3QP 
       50.70         0.92         0.99         0.69         1.15         9.40 
TCGA-AC-A3TN TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AC-A3YJ TCGA-AN-A046 TCGA-AN-A0FF 
        1.12         1.68         1.51         1.28         0.33         4.60 
TCGA-AN-A0FN TCGA-AN-A0FS TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AN-A0XV TCGA-AO-A03U 
        7.17         6.28         0.33         0.33         5.33        59.05 
TCGA-AO-A0J5 TCGA-AO-A0J8 TCGA-AO-A0JA TCGA-AO-A0JC TCGA-AO-A0JF TCGA-AO-A0JJ 
       24.16        22.36        21.53        50.86        21.37        62.04 
TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A128 TCGA-AO-A12A TCGA-AO-A12B TCGA-AO-A12H 
       99.22        93.70        94.59        90.54        77.56        28.34 
TCGA-AO-A1KO TCGA-AQ-A1H3 TCGA-AR-A0TX TCGA-AR-A1AJ TCGA-AR-A1AL TCGA-AR-A1AM 
       14.73        13.22         0.49        52.73        48.82        62.56 
TCGA-AR-A1AN TCGA-AR-A1AO TCGA-AR-A1AS TCGA-AR-A1AU TCGA-AR-A1AW TCGA-AR-A1AX 
       43.69        43.53        40.83        46.32        35.24        36.26 
TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24T TCGA-AR-A24W 
       65.42        68.19        65.65         0.85        53.26        50.96 
TCGA-AR-A24X TCGA-AR-A252 TCGA-AR-A2LE TCGA-AR-A2LH TCGA-AR-A2LM TCGA-AR-A2LN 
       48.16        40.64       128.65        20.22        40.01        17.06 
TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-AR-A5QN TCGA-AR-A5QP TCGA-AR-A5QQ TCGA-B6-A0I5 
       20.81        16.96        16.01        20.45        10.59       149.56 
TCGA-B6-A0IC TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IP TCGA-B6-A0RH TCGA-B6-A0RI 
       50.70       126.12        84.59       110.93       188.98       234.25 
TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RQ TCGA-B6-A0RT TCGA-B6-A0RV TCGA-B6-A0WT 
       78.02       172.96       140.48        89.46       157.41       188.68 
TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A0X7 TCGA-B6-A1KI 
      129.57       129.70        28.24        68.94        58.88        73.51 
TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B7 TCGA-BH-A0BD TCGA-BH-A0BM TCGA-BH-A0BO 
       28.50        46.92        56.98        18.21        36.72        35.67 
TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BZ TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG 
       27.16        53.92        49.05        48.13        31.17        23.44 
TCGA-BH-A0DO TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0DZ TCGA-BH-A0E1 
       17.26        38.47        45.17        47.41        16.27        15.68 
TCGA-BH-A0E2 TCGA-BH-A0E7 TCGA-BH-A0EA TCGA-BH-A0EB TCGA-BH-A0EE TCGA-BH-A0H3 
       14.30        44.78        32.65        24.49        31.00        37.78 
TCGA-BH-A0H5 TCGA-BH-A0H6 TCGA-BH-A0HA TCGA-BH-A0HI TCGA-BH-A0HK TCGA-BH-A0HO 
       35.51        24.56        52.96        20.35         5.85         2.50 
TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0RX TCGA-BH-A0W4 TCGA-BH-A0W5 TCGA-BH-A18F 
       13.61        36.85         5.59         5.75        42.35         8.81 
TCGA-BH-A18G TCGA-BH-A18J TCGA-BH-A18M TCGA-BH-A18P TCGA-BH-A1ET TCGA-BH-A1EU 
        2.01        20.09        72.56        30.28        82.85        42.28 
TCGA-BH-A1EX TCGA-BH-A1F0 TCGA-BH-A1FB TCGA-BH-A1FG TCGA-BH-A1FH TCGA-BH-A1FJ 
       49.58        25.81       120.62       122.89        36.92        63.35 
TCGA-BH-A1FL TCGA-BH-A1FR TCGA-BH-A1FU TCGA-BH-A28O TCGA-BH-A2L8 TCGA-BH-A42U 
       55.00       144.59        72.07        10.62        20.12       109.25 
TCGA-BH-A42V TCGA-C8-A26V TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A275 TCGA-C8-A3M7 
        8.91         0.30         0.36         0.43         0.03         0.03 
TCGA-D8-A141 TCGA-D8-A145 TCGA-D8-A1JB TCGA-D8-A1JE TCGA-D8-A1JH TCGA-D8-A1JN 
       20.58        13.48        18.71        18.90        14.01        20.38 
TCGA-D8-A1JS TCGA-D8-A1JU TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XC 
       12.20        14.70         2.79         8.94         6.61         2.66 
TCGA-D8-A1XG TCGA-D8-A1XM TCGA-D8-A1XO TCGA-D8-A1XV TCGA-D8-A27E TCGA-D8-A27I 
        6.44        17.69         7.96        15.12        17.42        14.43 
TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27P TCGA-D8-A27T TCGA-D8-A3Z5 TCGA-D8-A3Z6 
        9.44         4.11         0.76        13.05        14.50         6.05 
TCGA-D8-A4Z1 TCGA-E2-A108 TCGA-E2-A10A TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14Q 
        7.33        27.52        40.41        28.44        28.87        38.24 
TCGA-E2-A14U TCGA-E2-A14Y TCGA-E2-A154 TCGA-E2-A156 TCGA-E2-A15C TCGA-E2-A15D 
       43.33        28.60        19.43        23.87        22.78        17.26 
TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A1B1 TCGA-E2-A1B4 
       17.39        19.36         9.01        20.58        53.03        29.95 
TCGA-E2-A1B5 TCGA-E2-A1B6 TCGA-E2-A1BC TCGA-E2-A1IF TCGA-E2-A1IJ TCGA-E2-A1IK 
       32.32        28.47        16.47        37.41        28.41        22.62 
TCGA-E2-A1IL TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L9 TCGA-E2-A1LB TCGA-E2-A2P6 
        3.85        11.08        54.18        19.63        40.47         5.49 
TCGA-E2-A3DX TCGA-E2-A570 TCGA-E9-A1R0 TCGA-E9-A1R3 TCGA-E9-A1R4 TCGA-E9-A1R5 
       15.72        18.05        14.27         2.10         6.08         1.38 
TCGA-E9-A1RA TCGA-E9-A1RI TCGA-E9-A227 TCGA-E9-A229 TCGA-E9-A243 TCGA-E9-A245 
        0.95        13.94         0.79        13.28        17.06         0.82 
TCGA-E9-A248 TCGA-E9-A24A TCGA-E9-A2JT TCGA-E9-A3Q9 TCGA-E9-A3X8 TCGA-E9-A5FK 
        1.91         0.33         0.76        18.41        15.72         0.39 
TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J2 TCGA-EW-A1OX TCGA-EW-A1P1 
       39.72         8.48        18.21        13.25        29.95        39.78 
TCGA-EW-A1P3 TCGA-EW-A1P6 TCGA-EW-A1P7 TCGA-EW-A1PE TCGA-EW-A1PG TCGA-EW-A2FR 
       52.96        18.48        30.08        10.52        34.52        55.00 
TCGA-EW-A3E8 TCGA-EW-A424 TCGA-GI-A2C8 TCGA-GM-A2D9 TCGA-GM-A2DA TCGA-GM-A2DB 
       21.27        10.59         6.97        59.57       194.27        53.10 
TCGA-GM-A2DD TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM TCGA-GM-A2DN 
       43.04        61.91        62.33        90.81        76.64        77.33 
TCGA-GM-A2DO TCGA-GM-A3NY TCGA-GM-A3XG TCGA-GM-A3XN TCGA-GM-A4E0 TCGA-GM-A5PV 
       53.33        38.20        32.25        53.92        57.63        13.55 
TCGA-GM-A5PX TCGA-JL-A3YW TCGA-LL-A440 TCGA-LL-A442 TCGA-LL-A50Y TCGA-LL-A5YL 
       18.12        11.84         0.66         3.58         6.90         5.52 
TCGA-MS-A51U TCGA-OK-A5Q2 TCGA-OL-A5D6 TCGA-OL-A5D8 TCGA-OL-A5DA TCGA-OL-A5RU 
        2.79         2.10        12.66         7.53        44.58        27.65 
TCGA-OL-A5RV TCGA-OL-A5RX TCGA-OL-A5RY TCGA-OL-A66H TCGA-OL-A66J 
       24.10        16.87        14.10        14.73        54.51 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04R 
       14.37        14.01         7.96        39.32        18.18        82.16 
TCGA-A2-A04X TCGA-A2-A0CT TCGA-A2-A0D4 TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EV 
       55.43        75.22        25.22        74.37        35.05        31.82 
TCGA-A2-A0SW TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T7 TCGA-A2-A0YG TCGA-A2-A0YT 
       44.84        18.71        20.52        20.75        21.86        23.77 
TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A25B TCGA-A2-A25E TCGA-A7-A0CD TCGA-A7-A0CJ 
       17.36        36.79        16.31        91.92        38.30        30.58 
TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3IZ TCGA-A7-A4SB TCGA-A7-A4SF TCGA-A8-A06O 
       12.13        12.82        10.59         6.58        12.13        13.02 
TCGA-A8-A06Q TCGA-A8-A06R TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06Z TCGA-A8-A076 
        1.02        17.95        41.06        29.00         1.02        53.95 
TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07L TCGA-A8-A07P 
        9.01        33.01        18.94        14.01        17.00        10.98 
TCGA-A8-A07W TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I 
        9.99        36.95        13.02        18.05        19.92        12.00 
TCGA-A8-A08J TCGA-A8-A08O TCGA-A8-A08P TCGA-A8-A08S TCGA-A8-A097 TCGA-A8-A09A 
       37.05        30.97        30.97        19.07        12.00         9.99 
TCGA-A8-A09C TCGA-A8-A09E TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09R 
        1.02        30.97        33.07        29.95        15.02         8.98 
TCGA-A8-A09W TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0A9 TCGA-AC-A23H TCGA-AC-A2BM 
        0.99        13.02        21.04        13.02         2.66        38.20 
TCGA-AC-A2FM TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A 
       26.04         0.33         0.33         0.23         0.62         2.93 
TCGA-AN-A0FV TCGA-AN-A0FW TCGA-AN-A0XL TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03O 
        0.33         0.36         0.33         5.59        80.28        81.63 
TCGA-AO-A03P TCGA-AO-A03T TCGA-AO-A0J2 TCGA-AO-A0J3 TCGA-AO-A0JD TCGA-AO-A0JE 
       84.69        47.87        32.78        21.40        72.00        76.73 
TCGA-AO-A0JG TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A12E TCGA-AO-A1KQ TCGA-AO-A1KS 
       26.24        38.53        71.80        57.27        61.87         0.53 
TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A1H2 TCGA-AQ-A54O TCGA-AR-A0TQ TCGA-AR-A0TZ 
       17.79        24.79        15.62        21.86        49.32        43.17 
TCGA-AR-A0U2 TCGA-AR-A1AK TCGA-AR-A1AP TCGA-AR-A24L TCGA-AR-A24R TCGA-AR-A24V 
       83.87        51.22        39.95        73.02        57.37        54.18 
TCGA-AR-A250 TCGA-AR-A254 TCGA-AR-A255 TCGA-AR-A2LK TCGA-AR-A2LL TCGA-B6-A0I9 
       56.12        39.85        34.78        42.84         7.33        12.13 
TCGA-B6-A0IG TCGA-B6-A0RG TCGA-B6-A0RL TCGA-B6-A0RO TCGA-B6-A0WV TCGA-B6-A0WY 
      146.50        68.45        81.17       162.02        79.63       113.75 
TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0B4 TCGA-BH-A0BC TCGA-BH-A0C7 TCGA-BH-A0DD 
      139.17        24.53        39.16        32.02        42.90        45.80 
TCGA-BH-A0DH TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DL TCGA-BH-A0DQ TCGA-BH-A0EI 
       38.01        22.13        13.91        48.23         3.22        24.43 
TCGA-BH-A0H7 TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A0W7 
       23.05        51.29        27.25        50.76        23.93        44.81 
TCGA-BH-A18L TCGA-BH-A18N TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A18U TCGA-BH-A1EN 
       26.66        37.74        37.51        66.05        51.39        69.93 
TCGA-BH-A1ES TCGA-BH-A1EW TCGA-BH-A1F2 TCGA-BH-A1F8 TCGA-BH-A1FM TCGA-BH-A201 
      113.82        55.69        31.53        24.66        45.63         6.87 
TCGA-BH-A42T TCGA-C8-A12Q TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HK TCGA-C8-A1HL 
        0.99        12.99         0.85         0.23         0.23         0.07 
TCGA-C8-A1HN TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A TCGA-C8-A3M8 TCGA-D8-A13Y 
        0.07         0.13         0.20        12.20         0.23        11.90 
TCGA-D8-A140 TCGA-D8-A1J9 TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JI TCGA-D8-A1JT 
       13.25        17.49        15.78        18.15        18.97        13.32 
TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XS TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A27G 
       12.49         9.01        16.31         2.66         5.46        13.45 
TCGA-D8-A27N TCGA-D8-A27R TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A109 TCGA-E2-A14O 
        4.77         2.96         0.49        43.00        46.59        44.65 
TCGA-E2-A14P TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A14W TCGA-E2-A152 
       40.96        33.17        33.30        34.22        31.99        27.12 
TCGA-E2-A15A TCGA-E2-A15E TCGA-E2-A15H TCGA-E2-A15O TCGA-E2-A15P TCGA-E2-A15S 
       23.34        20.68        12.92        12.99        19.56        14.07 
TCGA-E2-A15T TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1LA TCGA-E2-A56Z TCGA-E9-A1NI 
       14.99        38.30        32.78        24.59         7.20        10.09 
TCGA-E9-A1R2 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG 
        0.62         2.76        21.17        21.63         6.54        21.24 
TCGA-E9-A247 TCGA-E9-A295 TCGA-E9-A2JS TCGA-E9-A5UO TCGA-EW-A1IW TCGA-EW-A1J3 
        0.39         0.69        17.75         0.23        12.20        16.57 
TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OY TCGA-EW-A1P5 TCGA-EW-A1PD TCGA-EW-A2FS 
       15.68        28.77        29.85        23.11        13.94        46.75 
TCGA-EW-A2FW TCGA-OL-A5RZ 
       22.09        10.29 

$subtype3
TCGA-A1-A0SE TCGA-A1-A0SI TCGA-A2-A0CS TCGA-A2-A0CV TCGA-A2-A3XU TCGA-A2-A4S2 
       43.40        20.84        75.55        63.42        29.98         6.74 
TCGA-A7-A0DB TCGA-A7-A425 TCGA-A8-A06Y TCGA-A8-A07F TCGA-A8-A07Z TCGA-A8-A084 
       33.07        14.66        26.01        18.94        28.04        15.06 
TCGA-A8-A08C TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A0A2 
       19.96        16.01        17.92         9.99        12.00        19.00 
TCGA-A8-A0AB TCGA-AC-A23E TCGA-AN-A0FK TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AO-A03N 
       17.00         2.37         6.97        12.33         0.30        54.08 
TCGA-AO-A0J7 TCGA-AO-A0J9 TCGA-AQ-A54N TCGA-AR-A0TR TCGA-AR-A1AV TCGA-AR-A24K 
       20.28        53.00         2.53         5.26        42.58        50.89 
TCGA-AR-A5QM TCGA-B6-A0IB TCGA-B6-A0IH TCGA-B6-A0RP TCGA-B6-A0WW TCGA-BH-A0B5 
       54.71       129.57       112.37       102.77        17.95        48.36 
TCGA-BH-A0BA TCGA-BH-A0BJ TCGA-BH-A0BV TCGA-BH-A0C1 TCGA-BH-A0DP TCGA-BH-A0E9 
       37.22        21.70        49.94        43.99        15.65        46.19 
TCGA-BH-A0GZ TCGA-BH-A0HU TCGA-BH-A18K TCGA-BH-A1EV TCGA-BH-A202 TCGA-BH-A28Q 
       10.78        12.89        90.81        12.00         0.72         6.44 
TCGA-C8-A1HI TCGA-C8-A274 TCGA-D8-A146 TCGA-D8-A1J8 TCGA-D8-A1JA TCGA-D8-A1XR 
        0.07         0.03        21.14        14.17        16.50        15.85 
TCGA-D8-A1Y1 TCGA-D8-A27V TCGA-E2-A107 TCGA-E2-A10B TCGA-E2-A153 TCGA-E2-A15G 
        3.78        12.53        34.39        37.51        23.24        18.18 
TCGA-E2-A1BD TCGA-E2-A1IH TCGA-E2-A1L8 TCGA-E2-A2P5 TCGA-E9-A1RC TCGA-E9-A1RD 
       17.10        33.73        39.62        16.90        40.37         0.66 
TCGA-E9-A249 TCGA-E9-A3HO TCGA-EW-A1PC TCGA-GM-A3NW TCGA-LQ-A4E4 TCGA-OL-A66K 
        0.92        13.08         6.12       110.50        15.91        33.90 

$subtype4
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U 
       31.79        28.01        19.17        17.98        73.84        22.03 
TCGA-A2-A0CM TCGA-A2-A0CW TCGA-A2-A0CX TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 
       24.79        64.01        56.81        21.14        34.55        33.76 
TCGA-A2-A0EQ TCGA-A2-A0EY TCGA-A2-A0SV TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 
       79.76        24.16        27.12        50.43        17.52         7.96 
TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A3XS TCGA-A2-A3XT 
       18.18        18.58        31.69        19.17        33.93        83.01 
TCGA-A2-A3XX TCGA-A2-A3XY TCGA-A2-A3Y0 TCGA-A2-A4RW TCGA-A2-A4S3 TCGA-A7-A0CE 
       38.40        34.98        38.33         7.30         3.42        35.31 
TCGA-A7-A0D9 TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26G TCGA-A7-A26I 
       37.45        12.26         8.78        10.72        10.95        12.13 
TCGA-A7-A4SA TCGA-A7-A4SD TCGA-A7-A4SE TCGA-A7-A56D TCGA-A7-A5ZV TCGA-A8-A06X 
        7.92         5.52        12.20         5.82         6.90        31.00 
TCGA-A8-A075 TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08B TCGA-A8-A08L 
       17.00         9.99         8.98         9.96        23.08         9.99 
TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09D TCGA-A8-A09N TCGA-A8-A09Q TCGA-AC-A23C 
        0.99        33.99        13.02         1.02        25.02         0.95 
TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AJ 
       38.53         1.02         2.27         1.78         1.71         7.99 
TCGA-AN-A0AK TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT 
        7.33         6.48         0.16         0.30         0.30         0.33 
TCGA-AN-A0FD TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FT TCGA-AN-A0FX TCGA-AN-A0FY 
        6.41         7.92         7.56         6.02         0.33         0.33 
TCGA-AN-A0FZ TCGA-AN-A0XN TCGA-AN-A0XT TCGA-AN-A0XU TCGA-AO-A03M TCGA-AO-A03V 
        0.33         0.33         0.33         0.33        47.84        29.13 
TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JB TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 
       17.65        37.48        50.70        55.33       102.54        96.10 
TCGA-AO-A12D TCGA-AO-A12F TCGA-AO-A12G TCGA-AO-A1KR TCGA-AQ-A04J TCGA-AQ-A04L 
       64.04        48.36        41.59        70.36        26.93       130.09 
TCGA-AQ-A0Y5 TCGA-AR-A0TP TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TV TCGA-AR-A0TW 
        5.62        82.88        37.41        55.20        29.72        24.30 
TCGA-AR-A0TY TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI 
       55.86         0.26         6.08        53.49        75.55        61.84 
TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24H TCGA-AR-A24Q TCGA-AR-A24S 
       43.04        17.19        20.19       109.58        66.02        62.07 
TCGA-AR-A24U TCGA-AR-A24Z TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR TCGA-B6-A0I1 
       53.36        51.75        45.14        93.83        20.38        77.62 
TCGA-B6-A0I2 TCGA-B6-A0IE TCGA-B6-A0IJ TCGA-B6-A0IK TCGA-B6-A0IO TCGA-B6-A0IQ 
      143.34        65.69       176.98        18.77       110.14       140.84 
TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RU TCGA-B6-A0X1 TCGA-B6-A1KF TCGA-BH-A0AV 
      211.53       100.67       131.21       186.44       101.52        38.79 
TCGA-BH-A0AW TCGA-BH-A0B3 TCGA-BH-A0B6 TCGA-BH-A0B9 TCGA-BH-A0BF TCGA-BH-A0BG 
       20.45        39.55        56.94        51.68        25.68        24.85 
TCGA-BH-A0BL TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BW TCGA-BH-A0C0 TCGA-BH-A0E0 
       44.02        48.69        53.65        11.67        41.75         4.37 
TCGA-BH-A0E6 TCGA-BH-A0GY TCGA-BH-A0H9 TCGA-BH-A0WA TCGA-BH-A18Q TCGA-BH-A18T 
        9.60        30.35        41.00        23.05        55.63         7.36 
TCGA-BH-A18V TCGA-BH-A1EY TCGA-BH-A1F6 TCGA-BH-A1FE TCGA-BH-A1FN TCGA-BH-A203 
       51.12        17.69        97.48        74.73        72.07        38.60 
TCGA-BH-A208 TCGA-BH-A209 TCGA-C8-A1HJ TCGA-C8-A1HM TCGA-C8-A26W TCGA-C8-A278 
       57.83       130.16         0.16         0.20         0.23         0.03 
TCGA-C8-A27B TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JF 
        0.99        20.88        13.97        14.17        19.20        12.03 
TCGA-D8-A1JG TCGA-D8-A1JJ TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1JP 
       12.03        20.09        20.12        20.09        19.40        21.01 
TCGA-D8-A1X5 TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL TCGA-D8-A1XQ TCGA-D8-A1XU 
        5.62        11.57        10.72        10.49        16.41        12.99 
TCGA-D8-A1XW TCGA-D8-A1XZ TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14N 
       12.66         3.95         7.46         4.60         4.73        47.15 
TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A155 TCGA-E2-A158 
       38.60        31.92        17.03        25.41        21.04        14.79 
TCGA-E2-A159 TCGA-E2-A15M TCGA-E2-A1AZ TCGA-E2-A1II TCGA-E2-A1IO TCGA-E2-A1L7 
       25.05         7.69        60.53        33.70        20.94        27.42 
TCGA-E2-A1LE TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LL TCGA-E2-A573 TCGA-E9-A1RH 
       28.90       106.72       102.61        43.04        22.26        20.55 
TCGA-E9-A226 TCGA-E9-A22G TCGA-E9-A244 TCGA-E9-A3QA TCGA-E9-A5FL TCGA-EW-A1J1 
       20.61        10.19         0.66         0.62         0.26        18.90 
TCGA-EW-A1OV TCGA-EW-A1OW TCGA-EW-A1OZ TCGA-EW-A1P4 TCGA-EW-A1P8 TCGA-EW-A1PA 
       25.94        22.82        40.41        29.82         7.86        18.90 
TCGA-EW-A1PB TCGA-EW-A1PF TCGA-EW-A1PH TCGA-EW-A2FV TCGA-EW-A3U0 TCGA-EW-A423 
       19.99        14.43        19.92        14.04        17.49        10.16 
TCGA-GI-A2C9 TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A3XL TCGA-LL-A441 TCGA-OL-A5D7 
      110.07        42.71        42.28        69.30         2.99        46.55 
TCGA-OL-A5RW TCGA-OL-A5S0 TCGA-OL-A66I 
       26.20         9.80        23.70 

$subtype5
TCGA-A2-A0CU TCGA-A2-A0EU TCGA-A2-A1FV TCGA-A2-A1G0 TCGA-A2-A25D TCGA-A7-A13F 
        5.16        34.29        23.47        20.25        18.15        12.72 
TCGA-A8-A082 TCGA-A8-A091 TCGA-AO-A03R TCGA-AO-A1KP TCGA-AR-A0U3 TCGA-B6-A0IA 
       18.05        19.07        68.75        82.62        74.40       220.87 
TCGA-B6-A0WS TCGA-B6-A0WX TCGA-B6-A1KC TCGA-B6-A2IU TCGA-BH-A0AY TCGA-BH-A0BT 
       97.48        21.47        43.59       170.17        25.55        45.57 
TCGA-BH-A0DS TCGA-BH-A0H0 TCGA-BH-A0HB TCGA-BH-A18I TCGA-BH-A1EO TCGA-BH-A1F5 
        2.53        15.16        26.50         7.23        91.99        89.16 
TCGA-BH-A1FC TCGA-BH-A1FD TCGA-BH-A204 TCGA-D8-A1X6 TCGA-D8-A1XD TCGA-D8-A1XF 
      114.12        33.14        83.31         7.76         5.10         6.48 
TCGA-D8-A1XT TCGA-D8-A1Y2 TCGA-D8-A1Y3 TCGA-E2-A10C TCGA-E2-A15F TCGA-E2-A15R 
        6.35         2.37         4.08        40.08        21.60        17.06 
TCGA-E2-A1B0 TCGA-E2-A1IN TCGA-E2-A1LG TCGA-E2-A1LK TCGA-E9-A1RB TCGA-E9-A54Y 
       53.62        22.19        18.87         8.75        20.78         0.23 
TCGA-EW-A1P0 TCGA-GM-A2DC TCGA-JL-A3YX 
       41.10        53.52        11.57 

subtype1 subtype2 subtype3 subtype4 subtype5 
    0.03     0.07     0.03     0.03     0.23 
subtype1 subtype2 subtype3 subtype4 subtype5 
  234.25   162.02   129.57   211.53   220.87 
subtype1 subtype2 subtype3 subtype4 subtype5 
  22.450   21.515   18.560   21.140   21.600 
[1] "0.0 - 234.2 (22.4)" "0.1 - 162.0 (21.5)" "0.0 - 129.6 (18.6)"
[4] "0.0 - 211.5 (21.1)" "0.2 - 220.9 (21.6)"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
 [13] "subtype4" "subtype2" "subtype1" "subtype4" "subtype1" "subtype2"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
 [31] "subtype1" "subtype3" "subtype2" "subtype5" "subtype3" "subtype4"
 [37] "subtype4" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
 [49] "subtype1" "subtype2" "subtype5" "subtype2" "subtype1" "subtype1"
 [55] "subtype4" "subtype1" "subtype1" "subtype4" "subtype2" "subtype4"
 [61] "subtype1" "subtype4" "subtype1" "subtype4" "subtype2" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype4"
 [73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype4" "subtype1"
 [79] "subtype1" "subtype4" "subtype2" "subtype5" "subtype2" "subtype2"
 [85] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype1"
 [91] "subtype1" "subtype2" "subtype1" "subtype5" "subtype2" "subtype1"
 [97] "subtype1" "subtype1" "subtype4" "subtype4" "subtype3" "subtype1"
[103] "subtype1" "subtype4" "subtype4" "subtype1" "subtype4" "subtype4"
[109] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype4"
[115] "subtype2" "subtype4" "subtype1" "subtype1" "subtype2" "subtype4"
[121] "subtype4" "subtype3" "subtype4" "subtype4" "subtype5" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype4"
[133] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[139] "subtype1" "subtype3" "subtype1" "subtype4" "subtype2" "subtype4"
[145] "subtype4" "subtype2" "subtype4" "subtype4" "subtype2" "subtype1"
[151] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype3"
[157] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype1"
[163] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype4"
[169] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype3"
[175] "subtype5" "subtype3" "subtype2" "subtype2" "subtype1" "subtype4"
[181] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype4"
[187] "subtype2" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[193] "subtype1" "subtype5" "subtype3" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype2" "subtype3" "subtype2" "subtype4" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype2"
[211] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[217] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[223] "subtype4" "subtype3" "subtype1" "subtype2" "subtype1" "subtype4"
[229] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[235] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype1"
[241] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[247] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[253] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[265] "subtype3" "subtype4" "subtype1" "subtype1" "subtype4" "subtype2"
[271] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype4"
[277] "subtype3" "subtype3" "subtype1" "subtype1" "subtype4" "subtype4"
[283] "subtype1" "subtype2" "subtype2" "subtype4" "subtype3" "subtype2"
[289] "subtype2" "subtype5" "subtype2" "subtype1" "subtype4" "subtype2"
[295] "subtype2" "subtype4" "subtype1" "subtype4" "subtype3" "subtype1"
[301] "subtype3" "subtype1" "subtype4" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype2" "subtype2" "subtype1" "subtype4" "subtype2"
[313] "subtype4" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[319] "subtype1" "subtype4" "subtype2" "subtype4" "subtype4" "subtype1"
[325] "subtype1" "subtype5" "subtype2" "subtype4" "subtype2" "subtype2"
[331] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype1"
[337] "subtype3" "subtype2" "subtype4" "subtype2" "subtype3" "subtype4"
[343] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype2"
[349] "subtype4" "subtype4" "subtype2" "subtype5" "subtype4" "subtype4"
[355] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[361] "subtype1" "subtype2" "subtype4" "subtype4" "subtype1" "subtype1"
[367] "subtype3" "subtype1" "subtype1" "subtype4" "subtype4" "subtype3"
[373] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
[379] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype1"
[385] "subtype1" "subtype4" "subtype2" "subtype4" "subtype1" "subtype2"
[391] "subtype2" "subtype4" "subtype1" "subtype1" "subtype2" "subtype2"
[397] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype3"
[403] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype1"
[409] "subtype2" "subtype5" "subtype3" "subtype1" "subtype4" "subtype2"
[415] "subtype3" "subtype4" "subtype4" "subtype1" "subtype1" "subtype4"
[421] "subtype1" "subtype4" "subtype4" "subtype2" "subtype1" "subtype1"
[427] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[433] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype1"
[439] "subtype2" "subtype3" "subtype5" "subtype2" "subtype1" "subtype1"
[445] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype4"
[451] "subtype1" "subtype2" "subtype5" "subtype2" "subtype4" "subtype4"
[457] "subtype5" "subtype1" "subtype1" "subtype4" "subtype2" "subtype3"
[463] "subtype4" "subtype1" "subtype4" "subtype3" "subtype2" "subtype1"
[469] "subtype4" "subtype4" "subtype3" "subtype4" "subtype1" "subtype1"
[475] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype3"
[481] "subtype4" "subtype1" "subtype4" "subtype3" "subtype1" "subtype2"
[487] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[493] "subtype2" "subtype1" "subtype3" "subtype2" "subtype5" "subtype1"
[499] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype1"
[505] "subtype4" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[511] "subtype2" "subtype4" "subtype3" "subtype5" "subtype1" "subtype1"
[517] "subtype1" "subtype2" "subtype4" "subtype1" "subtype5" "subtype1"
[523] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[529] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[535] "subtype2" "subtype4" "subtype1" "subtype1" "subtype5" "subtype1"
[541] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype4"
[547] "subtype2" "subtype2" "subtype4" "subtype2" "subtype4" "subtype2"
[553] "subtype5" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[559] "subtype1" "subtype4" "subtype1" "subtype2" "subtype5" "subtype4"
[565] "subtype2" "subtype1" "subtype5" "subtype5" "subtype4" "subtype1"
[571] "subtype1" "subtype1" "subtype1" "subtype2" "subtype4" "subtype1"
[577] "subtype1" "subtype2" "subtype3" "subtype4" "subtype5" "subtype4"
[583] "subtype4" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[589] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype4"
[595] "subtype2" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[601] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[607] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype2"
[613] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype1"
[619] "subtype3" "subtype4" "subtype3" "subtype2" "subtype3" "subtype1"
[625] "subtype2" "subtype2" "subtype1" "subtype4" "subtype4" "subtype1"
[631] "subtype2" "subtype4" "subtype4" "subtype4" "subtype4" "subtype1"
[637] "subtype4" "subtype1" "subtype2" "subtype1" "subtype4" "subtype5"
[643] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[649] "subtype5" "subtype5" "subtype1" "subtype4" "subtype4" "subtype4"
[655] "subtype1" "subtype1" "subtype4" "subtype3" "subtype2" "subtype5"
[661] "subtype4" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[667] "subtype3" "subtype5" "subtype5" "subtype1" "subtype4" "subtype2"
[673] "subtype4" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[679] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[685] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[691] "subtype1" "subtype3" "subtype5" "subtype1" "subtype1" "subtype4"
[697] "subtype2" "subtype2" "subtype1" "subtype4" "subtype2" "subtype2"
[703] "subtype1" "subtype2" "subtype2" "subtype4" "subtype1" "subtype4"
[709] "subtype4" "subtype2" "subtype3" "subtype1" "subtype4" "subtype1"
[715] "subtype4" "subtype4" "subtype2" "subtype1" "subtype1" "subtype2"
[721] "subtype5" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[727] "subtype1" "subtype4" "subtype2" "subtype2" "subtype5" "subtype2"
[733] "subtype2" "subtype4" "subtype5" "subtype1" "subtype1" "subtype1"
[739] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[745] "subtype3" "subtype4" "subtype1" "subtype1" "subtype1" "subtype5"
[751] "subtype4" "subtype1" "subtype1" "subtype4" "subtype3" "subtype1"
[757] "subtype2" "subtype1" "subtype4" "subtype5" "subtype4" "subtype4"
[763] "subtype5" "subtype4" "subtype3" "subtype1" "subtype1" "subtype2"
[769] "subtype1" "subtype4" "subtype2" "subtype1" "subtype2" "subtype1"
[775] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype5"
[781] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype4"
[787] "subtype1" "subtype4" "subtype1" "subtype1" "subtype4" "subtype1"
[793] "subtype4" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[799] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype4"
[805] "subtype1" "subtype5" "subtype1" "subtype4" "subtype2" "subtype2"
[811] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[817] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype2"
[823] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype2"
[829] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype3"
[835] "subtype2" "subtype1" "subtype4" "subtype1" "subtype4" "subtype1"
[841] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype4"
[847] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
[853] "subtype5" "subtype1" "subtype4" "subtype4" "subtype1" "subtype1"
[859] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[865] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype1"
[871] "subtype1" "subtype5" "subtype1" "subtype4" "subtype1" "subtype1"
[877] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype4"
[883] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[889] "subtype1" "subtype2" "subtype4" "subtype1" "subtype4" "subtype1"
[895] "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
 [13] "subtype4" "subtype2" "subtype1" "subtype4" "subtype1" "subtype2"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
 [31] "subtype1" "subtype3" "subtype2" "subtype5" "subtype3" "subtype4"
 [37] "subtype4" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
 [49] "subtype1" "subtype2" "subtype5" "subtype2" "subtype1" "subtype1"
 [55] "subtype4" "subtype1" "subtype1" "subtype4" "subtype2" "subtype4"
 [61] "subtype1" "subtype4" "subtype1" "subtype4" "subtype2" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype4"
 [73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype4" "subtype1"
 [79] "subtype1" "subtype4" "subtype2" "subtype5" "subtype2" "subtype2"
 [85] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype1"
 [91] "subtype1" "subtype2" "subtype1" "subtype5" "subtype2" "subtype1"
 [97] "subtype1" "subtype1" "subtype4" "subtype4" "subtype3" "subtype1"
[103] "subtype1" "subtype4" "subtype4" "subtype1" "subtype4" "subtype4"
[109] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype4"
[115] "subtype2" "subtype4" "subtype1" "subtype1" "subtype2" "subtype4"
[121] "subtype4" "subtype3" "subtype4" "subtype4" "subtype5" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype4"
[133] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[139] "subtype1" "subtype3" "subtype1" "subtype4" "subtype2" "subtype4"
[145] "subtype4" "subtype2" "subtype4" "subtype4" "subtype2" "subtype1"
[151] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype3"
[157] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype1"
[163] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype4"
[169] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype3"
[175] "subtype5" "subtype3" "subtype2" "subtype2" "subtype1" "subtype4"
[181] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype4"
[187] "subtype2" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[193] "subtype1" "subtype5" "subtype3" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype2" "subtype3" "subtype2" "subtype4" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype2"
[211] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[217] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[223] "subtype4" "subtype3" "subtype1" "subtype2" "subtype1" "subtype4"
[229] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[235] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype1"
[241] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[247] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[253] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[265] "subtype3" "subtype4" "subtype1" "subtype1" "subtype4" "subtype2"
[271] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype4"
[277] "subtype3" "subtype3" "subtype1" "subtype1" "subtype4" "subtype4"
[283] "subtype1" "subtype2" "subtype2" "subtype4" "subtype3" "subtype2"
[289] "subtype2" "subtype5" "subtype2" "subtype1" "subtype4" "subtype2"
[295] "subtype2" "subtype4" "subtype1" "subtype4" "subtype3" "subtype1"
[301] "subtype3" "subtype1" "subtype4" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype2" "subtype2" "subtype1" "subtype4" "subtype2"
[313] "subtype4" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[319] "subtype1" "subtype4" "subtype2" "subtype4" "subtype4" "subtype1"
[325] "subtype1" "subtype5" "subtype2" "subtype4" "subtype2" "subtype2"
[331] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype1"
[337] "subtype3" "subtype2" "subtype4" "subtype2" "subtype3" "subtype4"
[343] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype2"
[349] "subtype4" "subtype4" "subtype2" "subtype5" "subtype4" "subtype4"
[355] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[361] "subtype1" "subtype2" "subtype4" "subtype4" "subtype1" "subtype1"
[367] "subtype3" "subtype1" "subtype1" "subtype4" "subtype4" "subtype3"
[373] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
[379] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype1"
[385] "subtype1" "subtype4" "subtype2" "subtype4" "subtype1" "subtype2"
[391] "subtype2" "subtype4" "subtype1" "subtype1" "subtype2" "subtype2"
[397] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype3"
[403] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype1"
[409] "subtype2" "subtype5" "subtype3" "subtype1" "subtype4" "subtype2"
[415] "subtype3" "subtype4" "subtype4" "subtype1" "subtype1" "subtype4"
[421] "subtype1" "subtype4" "subtype4" "subtype2" "subtype1" "subtype1"
[427] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[433] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype1"
[439] "subtype2" "subtype3" "subtype5" "subtype2" "subtype1" "subtype1"
[445] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype4"
[451] "subtype1" "subtype2" "subtype5" "subtype2" "subtype4" "subtype4"
[457] "subtype5" "subtype1" "subtype1" "subtype4" "subtype2" "subtype3"
[463] "subtype4" "subtype1" "subtype4" "subtype3" "subtype2" "subtype1"
[469] "subtype4" "subtype4" "subtype3" "subtype4" "subtype1" "subtype1"
[475] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype3"
[481] "subtype4" "subtype1" "subtype4" "subtype3" "subtype1" "subtype2"
[487] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[493] "subtype2" "subtype1" "subtype3" "subtype2" "subtype5" "subtype1"
[499] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype1"
[505] "subtype4" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[511] "subtype2" "subtype4" "subtype3" "subtype5" "subtype1" "subtype1"
[517] "subtype1" "subtype2" "subtype4" "subtype1" "subtype5" "subtype1"
[523] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[529] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[535] "subtype2" "subtype4" "subtype1" "subtype1" "subtype5" "subtype1"
[541] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype4"
[547] "subtype2" "subtype2" "subtype4" "subtype2" "subtype4" "subtype2"
[553] "subtype5" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[559] "subtype1" "subtype4" "subtype1" "subtype2" "subtype5" "subtype4"
[565] "subtype2" "subtype1" "subtype5" "subtype5" "subtype4" "subtype1"
[571] "subtype1" "subtype1" "subtype1" "subtype2" "subtype4" "subtype1"
[577] "subtype1" "subtype2" "subtype3" "subtype4" "subtype5" "subtype4"
[583] "subtype4" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[589] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype4"
[595] "subtype2" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[601] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[607] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype2"
[613] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype1"
[619] "subtype3" "subtype4" "subtype3" "subtype2" "subtype3" "subtype1"
[625] "subtype2" "subtype2" "subtype1" "subtype4" "subtype4" "subtype1"
[631] "subtype2" "subtype4" "subtype4" "subtype4" "subtype4" "subtype1"
[637] "subtype4" "subtype1" "subtype2" "subtype1" "subtype4" "subtype5"
[643] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[649] "subtype5" "subtype5" "subtype1" "subtype4" "subtype4" "subtype4"
[655] "subtype1" "subtype1" "subtype4" "subtype3" "subtype2" "subtype5"
[661] "subtype4" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[667] "subtype3" "subtype5" "subtype5" "subtype1" "subtype4" "subtype2"
[673] "subtype4" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[679] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[685] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[691] "subtype1" "subtype3" "subtype5" "subtype1" "subtype1" "subtype4"
[697] "subtype2" "subtype2" "subtype1" "subtype4" "subtype2" "subtype2"
[703] "subtype1" "subtype2" "subtype2" "subtype4" "subtype1" "subtype4"
[709] "subtype4" "subtype2" "subtype3" "subtype1" "subtype4" "subtype1"
[715] "subtype4" "subtype4" "subtype2" "subtype1" "subtype1" "subtype2"
[721] "subtype5" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[727] "subtype1" "subtype4" "subtype2" "subtype2" "subtype5" "subtype2"
[733] "subtype2" "subtype4" "subtype5" "subtype1" "subtype1" "subtype1"
[739] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[745] "subtype3" "subtype4" "subtype1" "subtype1" "subtype1" "subtype5"
[751] "subtype4" "subtype1" "subtype1" "subtype4" "subtype3" "subtype1"
[757] "subtype2" "subtype1" "subtype4" "subtype5" "subtype4" "subtype4"
[763] "subtype5" "subtype4" "subtype3" "subtype1" "subtype1" "subtype2"
[769] "subtype1" "subtype4" "subtype2" "subtype1" "subtype2" "subtype1"
[775] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype5"
[781] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype4"
[787] "subtype1" "subtype4" "subtype1" "subtype1" "subtype4" "subtype1"
[793] "subtype4" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[799] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype4"
[805] "subtype1" "subtype5" "subtype1" "subtype4" "subtype2" "subtype2"
[811] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[817] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype2"
[823] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype2"
[829] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype3"
[835] "subtype2" "subtype1" "subtype4" "subtype1" "subtype4" "subtype1"
[841] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype4"
[847] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
[853] "subtype5" "subtype1" "subtype4" "subtype4" "subtype1" "subtype1"
[859] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[865] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype1"
[871] "subtype1" "subtype5" "subtype1" "subtype4" "subtype1" "subtype1"
[877] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype4"
[883] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[889] "subtype1" "subtype2" "subtype4" "subtype1" "subtype4" "subtype1"
[895] "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
 [13] "subtype4" "subtype2" "subtype1" "subtype4" "subtype1" "subtype2"
 [19] "subtype4" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
 [31] "subtype1" "subtype3" "subtype2" "subtype5" "subtype3" "subtype4"
 [37] "subtype4" "subtype4" "subtype4" "subtype4" "subtype1" "subtype2"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
 [49] "subtype1" "subtype2" "subtype5" "subtype2" "subtype1" "subtype1"
 [55] "subtype4" "subtype1" "subtype1" "subtype4" "subtype2" "subtype4"
 [61] "subtype1" "subtype4" "subtype1" "subtype4" "subtype2" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype4"
 [73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype4" "subtype1"
 [79] "subtype1" "subtype4" "subtype2" "subtype5" "subtype2" "subtype2"
 [85] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype1"
 [91] "subtype1" "subtype2" "subtype1" "subtype5" "subtype2" "subtype1"
 [97] "subtype1" "subtype1" "subtype4" "subtype4" "subtype3" "subtype1"
[103] "subtype1" "subtype4" "subtype4" "subtype1" "subtype4" "subtype4"
[109] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype4"
[115] "subtype2" "subtype4" "subtype1" "subtype1" "subtype2" "subtype4"
[121] "subtype4" "subtype3" "subtype4" "subtype4" "subtype5" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype4"
[133] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[139] "subtype1" "subtype3" "subtype1" "subtype4" "subtype2" "subtype4"
[145] "subtype4" "subtype2" "subtype4" "subtype4" "subtype2" "subtype1"
[151] "subtype2" "subtype2" "subtype2" "subtype2" "subtype4" "subtype3"
[157] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype1"
[163] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype4"
[169] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype3"
[175] "subtype5" "subtype3" "subtype2" "subtype2" "subtype1" "subtype4"
[181] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype4"
[187] "subtype2" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[193] "subtype1" "subtype5" "subtype3" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype2" "subtype3" "subtype2" "subtype4" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype2"
[211] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[217] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[223] "subtype4" "subtype3" "subtype1" "subtype2" "subtype1" "subtype4"
[229] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[235] "subtype1" "subtype4" "subtype1" "subtype4" "subtype1" "subtype1"
[241] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[247] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[253] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
[259] "subtype4" "subtype4" "subtype4" "subtype4" "subtype1" "subtype4"
[265] "subtype3" "subtype4" "subtype1" "subtype1" "subtype4" "subtype2"
[271] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype4"
[277] "subtype3" "subtype3" "subtype1" "subtype1" "subtype4" "subtype4"
[283] "subtype1" "subtype2" "subtype2" "subtype4" "subtype3" "subtype2"
[289] "subtype2" "subtype5" "subtype2" "subtype1" "subtype4" "subtype2"
[295] "subtype2" "subtype4" "subtype1" "subtype4" "subtype3" "subtype1"
[301] "subtype3" "subtype1" "subtype4" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype2" "subtype2" "subtype1" "subtype4" "subtype2"
[313] "subtype4" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[319] "subtype1" "subtype4" "subtype2" "subtype4" "subtype4" "subtype1"
[325] "subtype1" "subtype5" "subtype2" "subtype4" "subtype2" "subtype2"
[331] "subtype2" "subtype4" "subtype4" "subtype4" "subtype2" "subtype1"
[337] "subtype3" "subtype2" "subtype4" "subtype2" "subtype3" "subtype4"
[343] "subtype4" "subtype4" "subtype4" "subtype1" "subtype4" "subtype2"
[349] "subtype4" "subtype4" "subtype2" "subtype5" "subtype4" "subtype4"
[355] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[361] "subtype1" "subtype2" "subtype4" "subtype4" "subtype1" "subtype1"
[367] "subtype3" "subtype1" "subtype1" "subtype4" "subtype4" "subtype3"
[373] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
[379] "subtype2" "subtype4" "subtype1" "subtype4" "subtype2" "subtype1"
[385] "subtype1" "subtype4" "subtype2" "subtype4" "subtype1" "subtype2"
[391] "subtype2" "subtype4" "subtype1" "subtype1" "subtype2" "subtype2"
[397] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype3"
[403] "subtype1" "subtype1" "subtype1" "subtype4" "subtype4" "subtype1"
[409] "subtype2" "subtype5" "subtype3" "subtype1" "subtype4" "subtype2"
[415] "subtype3" "subtype4" "subtype4" "subtype1" "subtype1" "subtype4"
[421] "subtype1" "subtype4" "subtype4" "subtype2" "subtype1" "subtype1"
[427] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[433] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype1"
[439] "subtype2" "subtype3" "subtype5" "subtype2" "subtype1" "subtype1"
[445] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype4"
[451] "subtype1" "subtype2" "subtype5" "subtype2" "subtype4" "subtype4"
[457] "subtype5" "subtype1" "subtype1" "subtype4" "subtype2" "subtype3"
[463] "subtype4" "subtype1" "subtype4" "subtype3" "subtype2" "subtype1"
[469] "subtype4" "subtype4" "subtype3" "subtype4" "subtype1" "subtype1"
[475] "subtype4" "subtype1" "subtype4" "subtype1" "subtype5" "subtype3"
[481] "subtype4" "subtype1" "subtype4" "subtype3" "subtype1" "subtype2"
[487] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[493] "subtype2" "subtype1" "subtype3" "subtype2" "subtype5" "subtype1"
[499] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype1"
[505] "subtype4" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[511] "subtype2" "subtype4" "subtype3" "subtype5" "subtype1" "subtype1"
[517] "subtype1" "subtype2" "subtype4" "subtype1" "subtype5" "subtype1"
[523] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[529] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[535] "subtype2" "subtype4" "subtype1" "subtype1" "subtype5" "subtype1"
[541] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype4"
[547] "subtype2" "subtype2" "subtype4" "subtype2" "subtype4" "subtype2"
[553] "subtype5" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[559] "subtype1" "subtype4" "subtype1" "subtype2" "subtype5" "subtype4"
[565] "subtype2" "subtype1" "subtype5" "subtype5" "subtype4" "subtype1"
[571] "subtype1" "subtype1" "subtype1" "subtype2" "subtype4" "subtype1"
[577] "subtype1" "subtype2" "subtype3" "subtype4" "subtype5" "subtype4"
[583] "subtype4" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[589] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype4"
[595] "subtype2" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[601] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[607] "subtype4" "subtype2" "subtype4" "subtype1" "subtype2" "subtype2"
[613] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype1"
[619] "subtype3" "subtype4" "subtype3" "subtype2" "subtype3" "subtype1"
[625] "subtype2" "subtype2" "subtype1" "subtype4" "subtype4" "subtype1"
[631] "subtype2" "subtype4" "subtype4" "subtype4" "subtype4" "subtype1"
[637] "subtype4" "subtype1" "subtype2" "subtype1" "subtype4" "subtype5"
[643] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[649] "subtype5" "subtype5" "subtype1" "subtype4" "subtype4" "subtype4"
[655] "subtype1" "subtype1" "subtype4" "subtype3" "subtype2" "subtype5"
[661] "subtype4" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[667] "subtype3" "subtype5" "subtype5" "subtype1" "subtype4" "subtype2"
[673] "subtype4" "subtype1" "subtype1" "subtype1" "subtype4" "subtype2"
[679] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[685] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[691] "subtype1" "subtype3" "subtype5" "subtype1" "subtype1" "subtype4"
[697] "subtype2" "subtype2" "subtype1" "subtype4" "subtype2" "subtype2"
[703] "subtype1" "subtype2" "subtype2" "subtype4" "subtype1" "subtype4"
[709] "subtype4" "subtype2" "subtype3" "subtype1" "subtype4" "subtype1"
[715] "subtype4" "subtype4" "subtype2" "subtype1" "subtype1" "subtype2"
[721] "subtype5" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[727] "subtype1" "subtype4" "subtype2" "subtype2" "subtype5" "subtype2"
[733] "subtype2" "subtype4" "subtype5" "subtype1" "subtype1" "subtype1"
[739] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[745] "subtype3" "subtype4" "subtype1" "subtype1" "subtype1" "subtype5"
[751] "subtype4" "subtype1" "subtype1" "subtype4" "subtype3" "subtype1"
[757] "subtype2" "subtype1" "subtype4" "subtype5" "subtype4" "subtype4"
[763] "subtype5" "subtype4" "subtype3" "subtype1" "subtype1" "subtype2"
[769] "subtype1" "subtype4" "subtype2" "subtype1" "subtype2" "subtype1"
[775] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype5"
[781] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype4"
[787] "subtype1" "subtype4" "subtype1" "subtype1" "subtype4" "subtype1"
[793] "subtype4" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[799] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype4"
[805] "subtype1" "subtype5" "subtype1" "subtype4" "subtype2" "subtype2"
[811] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[817] "subtype2" "subtype2" "subtype4" "subtype4" "subtype1" "subtype2"
[823] "subtype4" "subtype5" "subtype1" "subtype1" "subtype4" "subtype2"
[829] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype3"
[835] "subtype2" "subtype1" "subtype4" "subtype1" "subtype4" "subtype1"
[841] "subtype2" "subtype4" "subtype2" "subtype1" "subtype4" "subtype4"
[847] "subtype1" "subtype1" "subtype4" "subtype1" "subtype1" "subtype1"
[853] "subtype5" "subtype1" "subtype4" "subtype4" "subtype1" "subtype1"
[859] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[865] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype1"
[871] "subtype1" "subtype5" "subtype1" "subtype4" "subtype1" "subtype1"
[877] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype4"
[883] "subtype1" "subtype1" "subtype1" "subtype1" "subtype4" "subtype1"
[889] "subtype1" "subtype2" "subtype4" "subtype1" "subtype4" "subtype1"
[895] "subtype3"
D3V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      41       41        6        7       104        74         1
  subtype2      12       12        3        1        78        48         1
  subtype3       3        1        0        1        22        23         0
  subtype4      18       13        1        0        97        59         0
  subtype5       3        3        0        0        20        10         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         42          7         25        4         0       7
  subtype2         42         12         11        5         0       2
  subtype3         12          3          5        2         0       3
  subtype4         30          4         10        4         1       3
  subtype5          8          0          2        0         0       1
D3V3, multiclass
          vv
clus        T1  T2  T3  T4
  subtype1 132 163  53  10
  subtype2  46 147  22  12
  subtype3   6  51  12   6
  subtype4  46 165  22   6
  subtype5  17  25   4   1
D3V4, multiclass
          vv
clus        N0  N1  N2  N3
  subtype1 179 117  29  28
  subtype2  89  81  36  15
  subtype3  28  30   8   8
  subtype4 132  68  30  11
  subtype5  17  21   6   2
D3V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 299   4  55
  subtype2        0 206   5  16
  subtype3        0  64   2   9
  subtype4        0 213   4  24
  subtype5        1  41   0   5
D3V6, multiclass
D3V7, binary
          cls
clus         0   1
  subtype1 359   0
  subtype2 218   9
  subtype3  74   1
  subtype4 241   0
  subtype5  47   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  359    0
  subtype2  218    9
  subtype3   74    1
  subtype4  241    0
  subtype5   47    0
          vv
clus       INFILTRATING CARCINOMA NOS INFILTRATING DUCTAL CARCINOMA
  subtype1                          0                           213
  subtype2                          0                           195
  subtype3                          0                            48
  subtype4                          1                           215
  subtype5                          0                            35
          vv
clus       INFILTRATING LOBULAR CARCINOMA MEDULLARY CARCINOMA
  subtype1                             99                   0
  subtype2                             20                   0
  subtype3                             21                   0
  subtype4                              5                   4
  subtype5                              6                   1
          vv
clus       MIXED HISTOLOGY (PLEASE SPECIFY) MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                               16                 10             21
  subtype2                                2                  3              7
  subtype3                                5                  0              1
  subtype4                                4                  0             11
  subtype5                                1                  1              3
D3V8, multiclass
D3V9, binary
          cls
clus         0   1
  subtype1  76 283
  subtype2  57 170
  subtype3  16  59
  subtype4  68 173
  subtype5  14  33
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   76  283
  subtype2   57  170
  subtype3   16   59
  subtype4   68  173
  subtype5   14   33
D3V10, continuous

Clustering(4) Variable = METHLYATION_CNMF
D4V1, survival
          sevent
clus2        0   1
  subtype1  83  17
  subtype2 131  15
  subtype3  87  14
  subtype4 117  13
  subtype5  36   3
  subtype6  93   9
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
     100      146      101      130       39      102 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      17       15       14       13        3        9 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A0SX TCGA-A2-A0T0 
        8.52        31.79        28.01        19.17        50.43        17.52 
TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A3XS 
        7.96        18.18        18.58        31.69        19.17        33.93 
TCGA-A2-A3XT TCGA-A2-A3XU TCGA-A2-A3XX TCGA-A2-A3XY TCGA-A2-A3Y0 TCGA-A2-A4RX 
       83.01        29.98        38.40        34.98        38.33         9.01 
TCGA-A2-A4S1 TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I 
       12.00         8.78        10.72        15.09        10.95        12.13 
TCGA-A7-A4SD TCGA-A7-A4SE TCGA-A7-A5ZV TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ 
        5.52        12.20         6.90        38.53         1.02         2.27 
TCGA-AN-A0XU TCGA-AO-A0JB TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A1KO 
        0.33        50.70        55.33       102.54        96.10        14.73 
TCGA-AO-A1KR TCGA-AQ-A54N TCGA-AR-A0TP TCGA-AR-A0TU TCGA-AR-A0U0 TCGA-AR-A0U4 
       70.36         2.53        82.88        11.84         0.26        53.49 
TCGA-AR-A1AI TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24Q TCGA-AR-A251 
       61.84        43.04        17.19        20.19        66.02        45.14 
TCGA-AR-A256 TCGA-AR-A2LR TCGA-B6-A0I1 TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RU 
       93.83        20.38        77.62       211.53       100.67       131.21 
TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-B6-A1KF TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0E0 
       21.47       186.44       101.52        39.55        51.68         4.37 
TCGA-BH-A0H9 TCGA-BH-A0WA TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN TCGA-BH-A208 
       41.00        23.05        97.48       114.12        72.07        57.83 
TCGA-C8-A1HJ TCGA-C8-A27B TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1XK 
        0.16         0.99        20.12        20.09        19.40        10.72 
TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A27F TCGA-D8-A27H TCGA-E2-A14N 
       16.41         6.35        12.66         7.46         4.60        47.15 
TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK 
       60.53        53.62        18.87       106.72       102.61         8.75 
TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E2-A573 TCGA-E9-A1RH TCGA-E9-A22G TCGA-E9-A244 
       43.04        15.45        22.26        20.55        10.19         0.66 
TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH TCGA-GI-A2C9 
       22.82        29.82         7.86        19.99        19.92       110.07 
TCGA-GM-A3XL TCGA-JL-A3YW TCGA-OL-A5RW TCGA-OL-A5S0 
       69.30        11.84        26.20         9.80 

$subtype2
TCGA-A1-A0SE TCGA-A1-A0SH TCGA-A1-A0SI TCGA-A2-A0CO TCGA-A2-A0EU TCGA-A2-A0T5 
       43.40        47.24        20.84       112.04        34.29        17.46 
TCGA-A2-A0YC TCGA-A2-A0YD TCGA-A2-A0YF TCGA-A2-A0YL TCGA-A2-A1G0 TCGA-A2-A25A 
       32.52        25.28        15.42        14.63        20.25       107.70 
TCGA-A2-A25C TCGA-A2-A3KD TCGA-A2-A4S2 TCGA-A7-A13H TCGA-A7-A3IZ TCGA-A7-A3J0 
       17.19        39.62         6.74        29.56        10.59         2.50 
TCGA-A7-A3J1 TCGA-A7-A3RF TCGA-A7-A425 TCGA-A7-A426 TCGA-A7-A4SB TCGA-A8-A0AD 
       11.28        13.41        14.66        11.97         6.58        38.04 
TCGA-AC-A23E TCGA-AC-A2FG TCGA-AC-A2QI TCGA-AC-A3HN TCGA-AC-A3QP TCGA-AC-A3TN 
        2.37        36.99         0.92         0.69         9.40         1.12 
TCGA-AC-A3YJ TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AO-A03N TCGA-AO-A0JF 
        1.28         0.30         0.33         0.33        54.08        21.37 
TCGA-AO-A0JJ TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A12B TCGA-AQ-A1H3 TCGA-AR-A0TR 
       62.04        99.22        93.70        77.56        13.22         5.26 
TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AM TCGA-AR-A1AN TCGA-AR-A1AS TCGA-AR-A24K 
       51.22        48.82        62.56        43.69        40.83        50.89 
TCGA-AR-A24M TCGA-AR-A24P TCGA-AR-A24X TCGA-AR-A2LE TCGA-AR-A2LM TCGA-AR-A2LN 
       65.42         0.85        48.16       128.65        40.01        17.06 
TCGA-B6-A0RI TCGA-B6-A0RM TCGA-B6-A0RN TCGA-B6-A0RP TCGA-B6-A0WZ TCGA-B6-A0X4 
      234.25        78.02       172.96       102.77       129.57        28.24 
TCGA-B6-A0X7 TCGA-B6-A1KI TCGA-B6-A2IU TCGA-BH-A0AZ TCGA-BH-A0B5 TCGA-BH-A0BA 
       58.88        73.51       170.17        28.50        48.36        37.22 
TCGA-BH-A0BC TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BS TCGA-BH-A0DP TCGA-BH-A0E1 
       32.02        21.70        36.72        53.92        15.65        15.68 
TCGA-BH-A0H6 TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HN TCGA-BH-A0HP TCGA-BH-A0W3 
       24.56        23.90        20.35        16.96        13.61        23.93 
TCGA-BH-A0W4 TCGA-BH-A1ET TCGA-BH-A1EX TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FR 
        5.75        82.85        49.58        63.35        55.00       144.59 
TCGA-BH-A28Q TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1JU 
        6.44        18.15        18.90        12.20        13.32        14.70 
TCGA-D8-A1X7 TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XO TCGA-D8-A1XR 
        2.79         8.94         6.61         2.66         7.96        15.85 
TCGA-D8-A1XS TCGA-D8-A1XV TCGA-D8-A27K TCGA-D8-A27P TCGA-D8-A27T TCGA-D8-A27V 
       16.31        15.12         9.44         0.76        13.05        12.53 
TCGA-D8-A3Z5 TCGA-D8-A3Z6 TCGA-E2-A107 TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A10F 
       14.50         6.05        34.39        37.51        28.44        28.87 
TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A1B4 TCGA-E2-A1BC TCGA-E2-A1IF TCGA-E2-A1IL 
       17.39        19.36        29.95        16.47        37.41         3.85 
TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A570 TCGA-E9-A1R0 
       11.08        54.18        39.62        19.63        18.05        14.27 
TCGA-E9-A1R3 TCGA-E9-A1RB TCGA-E9-A1RD TCGA-E9-A1RI TCGA-E9-A226 TCGA-E9-A227 
        2.10        20.78         0.66        13.94        20.61         0.79 
TCGA-E9-A229 TCGA-E9-A245 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A3HO TCGA-E9-A3Q9 
       13.28         0.82         0.92         0.33        13.08        18.41 
TCGA-EW-A1IX TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1P0 TCGA-EW-A1P3 TCGA-EW-A1P5 
       39.72        13.25        16.57        41.10        52.96        23.11 
TCGA-EW-A1PE TCGA-GM-A2D9 TCGA-GM-A5PV TCGA-GM-A5PX TCGA-JL-A3YX TCGA-LL-A442 
       10.52        59.57        13.55        18.12        11.57         3.58 
TCGA-LL-A50Y TCGA-MS-A51U 
        6.90         2.79 

$subtype3
TCGA-A1-A0SF TCGA-A1-A0SN TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0SY TCGA-A2-A0T4 
       48.10        39.32        27.12        44.84        44.28        20.52 
TCGA-A2-A0T6 TCGA-A2-A25D TCGA-A2-A3KC TCGA-A2-A3XV TCGA-A7-A13F TCGA-A7-A26H 
       18.90        18.15        20.88        14.07        12.72        13.12 
TCGA-A7-A4SC TCGA-A7-A4SF TCGA-A8-A0A6 TCGA-AC-A23C TCGA-AC-A2B8 TCGA-AN-A0XN 
        7.07        12.13        21.04         0.95         1.45         0.33 
TCGA-AN-A0XO TCGA-AN-A0XV TCGA-AO-A0JE TCGA-AO-A0JM TCGA-AO-A12E TCGA-AO-A12G 
       12.33         5.33        76.73        71.80        57.27        41.59 
TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AQ-A1H2 TCGA-AR-A0TV 
       17.79        24.79       130.09         5.62        15.62        29.72 
TCGA-AR-A0TZ TCGA-AR-A1AP TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A24H TCGA-AR-A24N 
       43.17        39.95        41.82        42.58       109.58        68.19 
TCGA-AR-A24R TCGA-AR-A24T TCGA-AR-A250 TCGA-AR-A255 TCGA-AR-A2LK TCGA-AR-A2LL 
       57.37        53.26        56.12        34.78        42.84         7.33 
TCGA-AR-A5QN TCGA-B6-A0RL TCGA-B6-A0WW TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK 
       16.01        81.17        17.95        45.80        38.01        13.91 
TCGA-BH-A0DS TCGA-BH-A0HK TCGA-BH-A0HY TCGA-BH-A1EN TCGA-BH-A1EV TCGA-BH-A1EW 
        2.53         5.85        50.76        69.93        12.00        55.69 
TCGA-BH-A1EY TCGA-BH-A1FD TCGA-BH-A202 TCGA-BH-A203 TCGA-BH-A42T TCGA-C8-A26V 
       17.69        33.14         0.72        38.60         0.99         0.30 
TCGA-C8-A274 TCGA-C8-A275 TCGA-C8-A3M8 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA 
        0.03         0.03         0.23        14.17        17.49        16.50 
TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1XA TCGA-D8-A1XJ 
       12.03        12.03        20.09        20.38         9.01        11.57 
TCGA-D8-A1XU TCGA-D8-A1Y1 TCGA-D8-A1Y3 TCGA-D8-A27G TCGA-D8-A27N TCGA-E2-A1BD 
       12.99         3.78         4.08        13.45         4.77        17.10 
TCGA-E2-A1L7 TCGA-E2-A1LE TCGA-E2-A2P5 TCGA-E2-A2P6 TCGA-E9-A1R5 TCGA-E9-A1RC 
       27.42        28.90        16.90         5.49         1.38        40.37 
TCGA-E9-A247 TCGA-E9-A2JS TCGA-E9-A54Y TCGA-EW-A1IW TCGA-EW-A1J5 TCGA-EW-A1OZ 
        0.39        17.75         0.23        12.20        15.68        40.41 
TCGA-EW-A1PC TCGA-EW-A1PD TCGA-EW-A3E8 TCGA-EW-A423 TCGA-EW-A424 TCGA-GM-A2DL 
        6.12        13.94        21.27        10.16        10.59        90.81 
TCGA-GM-A3NW TCGA-GM-A3NY TCGA-LL-A5YL TCGA-LQ-A4E4 TCGA-OL-A66K 
      110.50        38.20         5.52        15.91        33.90 

$subtype4
TCGA-A1-A0SG TCGA-A1-A0SJ TCGA-A1-A0SQ TCGA-A2-A04R TCGA-A2-A0CT TCGA-A2-A0T7 
       14.24        14.01        18.18        82.16        75.22        20.75 
TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FX 
       21.86        21.63        23.77        23.47        17.36        36.79 
TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25E TCGA-A2-A4S3 TCGA-A7-A0D9 TCGA-A7-A26J 
       19.56        16.31        91.92         3.42        37.45        12.13 
TCGA-A7-A2KD TCGA-A8-A075 TCGA-A8-A08O TCGA-AC-A23H TCGA-AC-A2BM TCGA-AC-A2FM 
       12.82        17.00        30.97         2.66        38.20        26.04 
TCGA-AN-A0XL TCGA-AN-A0XT TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A0JA TCGA-AO-A0JD 
        0.33         0.33        80.28        47.84        21.53        72.00 
TCGA-AO-A0JG TCGA-AO-A0JI TCGA-AO-A12C TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS 
       26.24        38.53        65.52        82.62        61.87         0.53 
TCGA-AR-A0TQ TCGA-AR-A0TW TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A24L TCGA-AR-A24S 
       49.32        24.30        83.87        74.40        73.02        62.07 
TCGA-AR-A24V TCGA-AR-A24Z TCGA-B6-A0RG TCGA-B6-A0RO TCGA-B6-A0WT TCGA-B6-A0WV 
       54.18        51.75        68.45       162.02       188.68        79.63 
TCGA-B6-A0WY TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0AW 
      113.75        68.94        43.59       139.17        24.53        20.45 
TCGA-BH-A0B8 TCGA-BH-A0BT TCGA-BH-A0BZ TCGA-BH-A0DQ TCGA-BH-A0E2 TCGA-BH-A0GY 
       51.58        45.57        49.05         3.22        14.30        30.35 
TCGA-BH-A0H0 TCGA-BH-A0H7 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HX TCGA-BH-A1EO 
       15.16        23.05        52.96        26.50        27.25        91.99 
TCGA-BH-A1ES TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FM TCGA-BH-A204 
      113.82        31.53        89.16        24.66        45.63        83.31 
TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A26W TCGA-C8-A26Y 
        0.23         0.07         0.20         0.07         0.23         0.43 
TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A27A TCGA-D8-A1JC TCGA-D8-A1JI TCGA-D8-A1X5 
        0.13         0.20        12.20        15.78        18.97         5.62 
TCGA-D8-A1X6 TCGA-D8-A1X9 TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XY TCGA-D8-A1XZ 
        7.76        12.49         5.10         6.48         2.66         3.95 
TCGA-D8-A1Y0 TCGA-D8-A27R TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 
        5.46         2.96         0.49        43.00        59.41        46.59 
TCGA-E2-A10C TCGA-E2-A15K TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1IN 
       40.08         9.01        38.30        32.78        33.73        22.19 
TCGA-E2-A1IO TCGA-E2-A1LA TCGA-E2-A56Z TCGA-E9-A1NI TCGA-E9-A1R6 TCGA-E9-A1R7 
       20.94        24.59         7.20        10.09         2.76        21.17 
TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A295 TCGA-E9-A5UO TCGA-EW-A1J1 
       21.63         6.54        21.24         0.69         0.23        18.90 
TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PF 
       28.77        29.95        29.85        18.48        18.90        14.43 
TCGA-EW-A2FS TCGA-EW-A2FV TCGA-EW-A2FW TCGA-GI-A2C8 TCGA-GM-A2DA TCGA-GM-A2DC 
       46.75        14.04        22.09         6.97       194.27        53.52 
TCGA-GM-A2DK TCGA-OL-A5RZ TCGA-OL-A66H TCGA-OL-A66J 
       62.33        10.29        14.73        54.51 

$subtype5
TCGA-A1-A0SM TCGA-A2-A0CK TCGA-A2-A0SU TCGA-A2-A1FZ TCGA-A2-A1G6 TCGA-A2-A4RW 
        7.96       125.56        54.61        22.45        16.47         7.30 
TCGA-A2-A4RY TCGA-A2-A4S0 TCGA-A7-A13G TCGA-A7-A26E TCGA-AC-A3OD TCGA-AQ-A54O 
        8.81         8.91        11.44        13.84         1.15        21.86 
TCGA-AR-A1AU TCGA-AR-A24W TCGA-AR-A254 TCGA-AR-A5QP TCGA-B6-A0IK TCGA-B6-A0RV 
       46.32        50.96        39.85        20.45        18.77       157.41 
TCGA-BH-A0DG TCGA-BH-A0GZ TCGA-BH-A0H3 TCGA-BH-A1FG TCGA-BH-A1FH TCGA-BH-A201 
       23.44        10.78        37.78       122.89        36.92         6.87 
TCGA-C8-A1HI TCGA-D8-A1JH TCGA-D8-A1JP TCGA-D8-A1XG TCGA-D8-A1XL TCGA-D8-A1XM 
        0.07        14.01        21.01         6.44        10.49        17.69 
TCGA-D8-A27E TCGA-E2-A14U TCGA-E2-A1LB TCGA-E9-A1R2 TCGA-EW-A2FR TCGA-GM-A2DM 
       17.42        43.33        40.47         0.62        55.00        76.64 
TCGA-GM-A3XG TCGA-OL-A5RV TCGA-OL-A5RX 
       32.25        24.10        16.87 

$subtype6
TCGA-A2-A0CR TCGA-A2-A0EN TCGA-A2-A0EP TCGA-A2-A0ST TCGA-A2-A0T1 TCGA-A2-A0YI 
      107.93        89.33       107.61        99.19        17.10        14.50 
TCGA-A2-A0YK TCGA-A2-A259 TCGA-A2-A25F TCGA-A2-A3XW TCGA-A2-A3XZ TCGA-A7-A3IY 
       19.30        52.44        10.59        49.48        31.96         4.96 
TCGA-A7-A4SA TCGA-AC-A23G TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FK TCGA-AC-A2FO 
        7.92        10.82         1.45        55.40        38.79        50.70 
TCGA-AC-A3BB TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AN-A0XW TCGA-AO-A03U TCGA-AO-A0JC 
        0.99         1.68         1.51         5.59        59.05        50.86 
TCGA-AO-A128 TCGA-AR-A0TT TCGA-AR-A0TX TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AW 
       94.59        55.20         0.49        52.73        43.53        35.24 
TCGA-AR-A1AX TCGA-AR-A24O TCGA-AR-A24U TCGA-AR-A252 TCGA-AR-A2LH TCGA-AR-A2LO 
       36.26        65.65        53.36        40.64        20.22        20.81 
TCGA-AR-A2LQ TCGA-AR-A5QQ TCGA-B6-A0RT TCGA-BH-A0B6 TCGA-BH-A0BF TCGA-BH-A0C0 
       16.96        10.59        89.46        56.94        25.68        41.75 
TCGA-BH-A0C3 TCGA-BH-A0DI TCGA-BH-A0DV TCGA-BH-A0RX TCGA-BH-A0W5 TCGA-BH-A1EU 
       48.13        22.13        45.17         5.59        42.35        42.28 
TCGA-BH-A1F0 TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FU TCGA-BH-A209 TCGA-BH-A28O 
       25.81       120.62        74.73        72.07       130.16        10.62 
TCGA-BH-A2L8 TCGA-BH-A42U TCGA-BH-A42V TCGA-C8-A26X TCGA-C8-A278 TCGA-C8-A3M7 
       20.12       109.25         8.91         0.36         0.03         0.03 
TCGA-D8-A1JB TCGA-D8-A1Y2 TCGA-D8-A27I TCGA-D8-A27L TCGA-D8-A27M TCGA-D8-A4Z1 
       18.71         2.37        14.43         4.11         4.73         7.33 
TCGA-E2-A108 TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1IJ 
       27.52        53.03        32.32        28.47        33.70        28.41 
TCGA-E2-A1IK TCGA-E2-A3DX TCGA-E9-A1R4 TCGA-E9-A1RA TCGA-E9-A243 TCGA-E9-A248 
       22.62        15.72         6.08         0.95        17.06         1.91 
TCGA-E9-A2JT TCGA-E9-A3QA TCGA-E9-A3X8 TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1OV 
        0.76         0.62        15.72         8.48        18.21        25.94 
TCGA-EW-A1P1 TCGA-EW-A1P7 TCGA-EW-A1PG TCGA-EW-A3U0 TCGA-GM-A2DB TCGA-GM-A2DD 
       39.78        30.08        34.52        17.49        53.10        43.04 
TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A2DI TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3XN 
       42.71        42.28        61.91        77.33        53.33        53.92 
TCGA-GM-A4E0 TCGA-LL-A440 TCGA-LL-A441 TCGA-OL-A5RU TCGA-OL-A5RY TCGA-OL-A66I 
       57.63         0.66         2.99        27.65        14.10        23.70 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    0.16     0.30     0.03     0.07     0.07     0.03 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  211.53   234.25   130.09   194.27   157.41   130.16 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  21.010   18.280   17.690   23.260   20.450   27.585 
[1] "0.2 - 211.5 (21.0)" "0.3 - 234.2 (18.3)" "0.0 - 130.1 (17.7)"
[4] "0.1 - 194.3 (23.3)" "0.1 - 157.4 (20.4)" "0.0 - 130.2 (27.6)"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype5" "subtype2" "subtype6" "subtype4"
 [19] "subtype6" "subtype6" "subtype2" "subtype6" "subtype5" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype1" "subtype6" "subtype1"
 [31] "subtype3" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
 [37] "subtype1" "subtype2" "subtype4" "subtype4" "subtype6" "subtype1"
 [43] "subtype6" "subtype2" "subtype1" "subtype4" "subtype4" "subtype4"
 [49] "subtype4" "subtype5" "subtype2" "subtype1" "subtype4" "subtype5"
 [55] "subtype6" "subtype2" "subtype4" "subtype2" "subtype3" "subtype4"
 [61] "subtype6" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [67] "subtype3" "subtype6" "subtype1" "subtype1" "subtype6" "subtype1"
 [73] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype2"
 [79] "subtype4" "subtype4" "subtype1" "subtype1" "subtype3" "subtype5"
 [85] "subtype2" "subtype5" "subtype1" "subtype1" "subtype3" "subtype1"
 [91] "subtype4" "subtype4" "subtype6" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype6" "subtype2" "subtype3"
[103] "subtype1" "subtype1" "subtype3" "subtype1" "subtype4" "subtype4"
[109] "subtype3" "subtype2" "subtype3" "subtype2" "subtype6" "subtype4"
[115] "subtype3" "subtype1" "subtype4" "subtype6" "subtype6" "subtype2"
[121] "subtype6" "subtype4" "subtype6" "subtype1" "subtype2" "subtype1"
[127] "subtype6" "subtype2" "subtype5" "subtype2" "subtype2" "subtype6"
[133] "subtype6" "subtype2" "subtype4" "subtype3" "subtype3" "subtype2"
[139] "subtype2" "subtype2" "subtype4" "subtype1" "subtype3" "subtype6"
[145] "subtype4" "subtype4" "subtype2" "subtype6" "subtype4" "subtype1"
[151] "subtype6" "subtype4" "subtype3" "subtype2" "subtype4" "subtype4"
[157] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[163] "subtype6" "subtype1" "subtype2" "subtype4" "subtype3" "subtype3"
[169] "subtype1" "subtype4" "subtype4" "subtype1" "subtype4" "subtype3"
[175] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[181] "subtype5" "subtype1" "subtype4" "subtype2" "subtype6" "subtype1"
[187] "subtype3" "subtype4" "subtype6" "subtype3" "subtype1" "subtype4"
[193] "subtype4" "subtype1" "subtype1" "subtype6" "subtype2" "subtype2"
[199] "subtype2" "subtype2" "subtype6" "subtype3" "subtype1" "subtype1"
[205] "subtype2" "subtype3" "subtype5" "subtype3" "subtype6" "subtype6"
[211] "subtype1" "subtype3" "subtype2" "subtype4" "subtype2" "subtype3"
[217] "subtype6" "subtype2" "subtype1" "subtype3" "subtype4" "subtype3"
[223] "subtype6" "subtype4" "subtype5" "subtype2" "subtype4" "subtype3"
[229] "subtype1" "subtype6" "subtype5" "subtype3" "subtype1" "subtype2"
[235] "subtype6" "subtype3" "subtype3" "subtype2" "subtype2" "subtype6"
[241] "subtype6" "subtype1" "subtype3" "subtype5" "subtype6" "subtype1"
[247] "subtype5" "subtype1" "subtype4" "subtype2" "subtype3" "subtype2"
[253] "subtype2" "subtype4" "subtype2" "subtype1" "subtype6" "subtype1"
[259] "subtype5" "subtype4" "subtype4" "subtype3" "subtype1" "subtype4"
[265] "subtype2" "subtype1" "subtype2" "subtype4" "subtype2" "subtype4"
[271] "subtype1" "subtype2" "subtype4" "subtype2" "subtype4" "subtype4"
[277] "subtype2" "subtype1" "subtype2" "subtype6" "subtype4" "subtype1"
[283] "subtype2" "subtype2" "subtype6" "subtype2" "subtype2" "subtype2"
[289] "subtype4" "subtype4" "subtype6" "subtype6" "subtype3" "subtype5"
[295] "subtype3" "subtype6" "subtype3" "subtype2" "subtype4" "subtype3"
[301] "subtype6" "subtype1" "subtype2" "subtype4" "subtype4" "subtype5"
[307] "subtype4" "subtype5" "subtype2" "subtype4" "subtype1" "subtype4"
[313] "subtype4" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[319] "subtype4" "subtype3" "subtype6" "subtype2" "subtype2" "subtype6"
[325] "subtype1" "subtype3" "subtype4" "subtype4" "subtype2" "subtype6"
[331] "subtype3" "subtype3" "subtype2" "subtype3" "subtype6" "subtype4"
[337] "subtype4" "subtype1" "subtype4" "subtype6" "subtype1" "subtype3"
[343] "subtype6" "subtype5" "subtype5" "subtype2" "subtype2" "subtype4"
[349] "subtype1" "subtype2" "subtype6" "subtype5" "subtype3" "subtype3"
[355] "subtype4" "subtype1" "subtype6" "subtype6" "subtype2" "subtype6"
[361] "subtype3" "subtype6" "subtype6" "subtype5" "subtype1" "subtype4"
[367] "subtype4" "subtype4" "subtype4" "subtype3" "subtype4" "subtype6"
[373] "subtype4" "subtype4" "subtype4" "subtype3" "subtype3" "subtype6"
[379] "subtype4" "subtype1" "subtype6" "subtype3" "subtype3" "subtype3"
[385] "subtype3" "subtype6" "subtype4" "subtype2" "subtype2" "subtype3"
[391] "subtype3" "subtype5" "subtype4" "subtype3" "subtype1" "subtype1"
[397] "subtype1" "subtype3" "subtype5" "subtype2" "subtype2" "subtype2"
[403] "subtype4" "subtype4" "subtype2" "subtype2" "subtype4" "subtype3"
[409] "subtype2" "subtype2" "subtype4" "subtype4" "subtype5" "subtype3"
[415] "subtype1" "subtype5" "subtype5" "subtype2" "subtype1" "subtype2"
[421] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype4"
[427] "subtype4" "subtype4" "subtype3" "subtype6" "subtype3" "subtype5"
[433] "subtype1" "subtype3" "subtype1" "subtype6" "subtype2" "subtype6"
[439] "subtype6" "subtype3" "subtype2" "subtype4" "subtype2" "subtype2"
[445] "subtype4" "subtype2" "subtype2" "subtype6" "subtype4" "subtype4"
[451] "subtype2" "subtype6" "subtype4" "subtype2" "subtype4" "subtype2"
[457] "subtype2" "subtype1" "subtype5" "subtype2" "subtype2" "subtype4"
[463] "subtype1" "subtype1" "subtype6" "subtype2" "subtype6" "subtype6"
[469] "subtype2" "subtype3" "subtype4" "subtype2" "subtype4" "subtype4"
[475] "subtype6" "subtype6" "subtype6" "subtype2" "subtype4" "subtype4"
[481] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype4"
[487] "subtype5" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[493] "subtype1" "subtype1" "subtype3" "subtype3" "subtype6" "subtype4"
[499] "subtype2" "subtype1" "subtype4" "subtype2" "subtype5" "subtype2"
[505] "subtype6" "subtype3" "subtype4" "subtype4" "subtype6" "subtype2"
[511] "subtype3" "subtype2" "subtype4" "subtype4" "subtype4" "subtype1"
[517] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype6"
[523] "subtype1" "subtype2" "subtype3" "subtype6" "subtype2" "subtype2"
[529] "subtype4" "subtype3" "subtype6" "subtype2" "subtype2" "subtype6"
[535] "subtype6" "subtype3" "subtype4" "subtype3" "subtype2" "subtype6"
[541] "subtype6" "subtype4" "subtype2" "subtype2" "subtype3" "subtype4"
[547] "subtype6" "subtype1" "subtype4" "subtype4" "subtype3" "subtype2"
[553] "subtype6" "subtype2" "subtype1" "subtype2" "subtype4" "subtype6"
[559] "subtype1" "subtype4" "subtype1" "subtype3" "subtype3" "subtype2"
[565] "subtype4" "subtype6" "subtype1" "subtype5" "subtype4" "subtype4"
[571] "subtype4" "subtype3" "subtype6" "subtype3" "subtype3" "subtype4"
[577] "subtype1" "subtype2" "subtype4" "subtype6" "subtype4" "subtype6"
[583] "subtype6" "subtype6" "subtype6" "subtype4" "subtype3" "subtype5"
[589] "subtype6" "subtype6" "subtype3" "subtype3" "subtype5" "subtype1"
[595] "subtype6" "subtype6" "subtype2" "subtype2" "subtype1" "subtype2"
[601] "subtype6" "subtype6" "subtype2" "subtype2" "subtype3" "subtype3"
[607] "subtype2" "subtype6" "subtype5" "subtype1" "subtype5" "subtype6"
[613] "subtype4" "subtype1" "subtype4" "subtype6" "subtype4" "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype5" "subtype2" "subtype6" "subtype4"
 [19] "subtype6" "subtype6" "subtype2" "subtype6" "subtype5" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype1" "subtype6" "subtype1"
 [31] "subtype3" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
 [37] "subtype1" "subtype2" "subtype4" "subtype4" "subtype6" "subtype1"
 [43] "subtype6" "subtype2" "subtype1" "subtype4" "subtype4" "subtype4"
 [49] "subtype4" "subtype5" "subtype2" "subtype1" "subtype4" "subtype5"
 [55] "subtype6" "subtype2" "subtype4" "subtype2" "subtype3" "subtype4"
 [61] "subtype6" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [67] "subtype3" "subtype6" "subtype1" "subtype1" "subtype6" "subtype1"
 [73] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype2"
 [79] "subtype4" "subtype4" "subtype1" "subtype1" "subtype3" "subtype5"
 [85] "subtype2" "subtype5" "subtype1" "subtype1" "subtype3" "subtype1"
 [91] "subtype4" "subtype4" "subtype6" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype6" "subtype2" "subtype3"
[103] "subtype1" "subtype1" "subtype3" "subtype1" "subtype4" "subtype4"
[109] "subtype3" "subtype2" "subtype3" "subtype2" "subtype6" "subtype4"
[115] "subtype3" "subtype1" "subtype4" "subtype6" "subtype6" "subtype2"
[121] "subtype6" "subtype4" "subtype6" "subtype1" "subtype2" "subtype1"
[127] "subtype6" "subtype2" "subtype5" "subtype2" "subtype2" "subtype6"
[133] "subtype6" "subtype2" "subtype4" "subtype3" "subtype3" "subtype2"
[139] "subtype2" "subtype2" "subtype4" "subtype1" "subtype3" "subtype6"
[145] "subtype4" "subtype4" "subtype2" "subtype6" "subtype4" "subtype1"
[151] "subtype6" "subtype4" "subtype3" "subtype2" "subtype4" "subtype4"
[157] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[163] "subtype6" "subtype1" "subtype2" "subtype4" "subtype3" "subtype3"
[169] "subtype1" "subtype4" "subtype4" "subtype1" "subtype4" "subtype3"
[175] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[181] "subtype5" "subtype1" "subtype4" "subtype2" "subtype6" "subtype1"
[187] "subtype3" "subtype4" "subtype6" "subtype3" "subtype1" "subtype4"
[193] "subtype4" "subtype1" "subtype1" "subtype6" "subtype2" "subtype2"
[199] "subtype2" "subtype2" "subtype6" "subtype3" "subtype1" "subtype1"
[205] "subtype2" "subtype3" "subtype5" "subtype3" "subtype6" "subtype6"
[211] "subtype1" "subtype3" "subtype2" "subtype4" "subtype2" "subtype3"
[217] "subtype6" "subtype2" "subtype1" "subtype3" "subtype4" "subtype3"
[223] "subtype6" "subtype4" "subtype5" "subtype2" "subtype4" "subtype3"
[229] "subtype1" "subtype6" "subtype5" "subtype3" "subtype1" "subtype2"
[235] "subtype6" "subtype3" "subtype3" "subtype2" "subtype2" "subtype6"
[241] "subtype6" "subtype1" "subtype3" "subtype5" "subtype6" "subtype1"
[247] "subtype5" "subtype1" "subtype4" "subtype2" "subtype3" "subtype2"
[253] "subtype2" "subtype4" "subtype2" "subtype1" "subtype6" "subtype1"
[259] "subtype5" "subtype4" "subtype4" "subtype3" "subtype1" "subtype4"
[265] "subtype2" "subtype1" "subtype2" "subtype4" "subtype2" "subtype4"
[271] "subtype1" "subtype2" "subtype4" "subtype2" "subtype4" "subtype4"
[277] "subtype2" "subtype1" "subtype2" "subtype6" "subtype4" "subtype1"
[283] "subtype2" "subtype2" "subtype6" "subtype2" "subtype2" "subtype2"
[289] "subtype4" "subtype4" "subtype6" "subtype6" "subtype3" "subtype5"
[295] "subtype3" "subtype6" "subtype3" "subtype2" "subtype4" "subtype3"
[301] "subtype6" "subtype1" "subtype2" "subtype4" "subtype4" "subtype5"
[307] "subtype4" "subtype5" "subtype2" "subtype4" "subtype1" "subtype4"
[313] "subtype4" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[319] "subtype4" "subtype3" "subtype6" "subtype2" "subtype2" "subtype6"
[325] "subtype1" "subtype3" "subtype4" "subtype4" "subtype2" "subtype6"
[331] "subtype3" "subtype3" "subtype2" "subtype3" "subtype6" "subtype4"
[337] "subtype4" "subtype1" "subtype4" "subtype6" "subtype1" "subtype3"
[343] "subtype6" "subtype5" "subtype5" "subtype2" "subtype2" "subtype4"
[349] "subtype1" "subtype2" "subtype6" "subtype5" "subtype3" "subtype3"
[355] "subtype4" "subtype1" "subtype6" "subtype6" "subtype2" "subtype6"
[361] "subtype3" "subtype6" "subtype6" "subtype5" "subtype1" "subtype4"
[367] "subtype4" "subtype4" "subtype4" "subtype3" "subtype4" "subtype6"
[373] "subtype4" "subtype4" "subtype4" "subtype3" "subtype3" "subtype6"
[379] "subtype4" "subtype1" "subtype6" "subtype3" "subtype3" "subtype3"
[385] "subtype3" "subtype6" "subtype4" "subtype2" "subtype2" "subtype3"
[391] "subtype3" "subtype5" "subtype4" "subtype3" "subtype1" "subtype1"
[397] "subtype1" "subtype3" "subtype5" "subtype2" "subtype2" "subtype2"
[403] "subtype4" "subtype4" "subtype2" "subtype2" "subtype4" "subtype3"
[409] "subtype2" "subtype2" "subtype4" "subtype4" "subtype5" "subtype3"
[415] "subtype1" "subtype5" "subtype5" "subtype2" "subtype1" "subtype2"
[421] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype4"
[427] "subtype4" "subtype4" "subtype3" "subtype6" "subtype3" "subtype5"
[433] "subtype1" "subtype3" "subtype1" "subtype6" "subtype2" "subtype6"
[439] "subtype6" "subtype3" "subtype2" "subtype4" "subtype2" "subtype2"
[445] "subtype4" "subtype2" "subtype2" "subtype6" "subtype4" "subtype4"
[451] "subtype2" "subtype6" "subtype4" "subtype2" "subtype4" "subtype2"
[457] "subtype2" "subtype1" "subtype5" "subtype2" "subtype2" "subtype4"
[463] "subtype1" "subtype1" "subtype6" "subtype2" "subtype6" "subtype6"
[469] "subtype2" "subtype3" "subtype4" "subtype2" "subtype4" "subtype4"
[475] "subtype6" "subtype6" "subtype6" "subtype2" "subtype4" "subtype4"
[481] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype4"
[487] "subtype5" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[493] "subtype1" "subtype1" "subtype3" "subtype3" "subtype6" "subtype4"
[499] "subtype2" "subtype1" "subtype4" "subtype2" "subtype5" "subtype2"
[505] "subtype6" "subtype3" "subtype4" "subtype4" "subtype6" "subtype2"
[511] "subtype3" "subtype2" "subtype4" "subtype4" "subtype4" "subtype1"
[517] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype6"
[523] "subtype1" "subtype2" "subtype3" "subtype6" "subtype2" "subtype2"
[529] "subtype4" "subtype3" "subtype6" "subtype2" "subtype2" "subtype6"
[535] "subtype6" "subtype3" "subtype4" "subtype3" "subtype2" "subtype6"
[541] "subtype6" "subtype4" "subtype2" "subtype2" "subtype3" "subtype4"
[547] "subtype6" "subtype1" "subtype4" "subtype4" "subtype3" "subtype2"
[553] "subtype6" "subtype2" "subtype1" "subtype2" "subtype4" "subtype6"
[559] "subtype1" "subtype4" "subtype1" "subtype3" "subtype3" "subtype2"
[565] "subtype4" "subtype6" "subtype1" "subtype5" "subtype4" "subtype4"
[571] "subtype4" "subtype3" "subtype6" "subtype3" "subtype3" "subtype4"
[577] "subtype1" "subtype2" "subtype4" "subtype6" "subtype4" "subtype6"
[583] "subtype6" "subtype6" "subtype6" "subtype4" "subtype3" "subtype5"
[589] "subtype6" "subtype6" "subtype3" "subtype3" "subtype5" "subtype1"
[595] "subtype6" "subtype6" "subtype2" "subtype2" "subtype1" "subtype2"
[601] "subtype6" "subtype6" "subtype2" "subtype2" "subtype3" "subtype3"
[607] "subtype2" "subtype6" "subtype5" "subtype1" "subtype5" "subtype6"
[613] "subtype4" "subtype1" "subtype4" "subtype6" "subtype4" "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
  [7] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype1"
 [13] "subtype4" "subtype4" "subtype5" "subtype2" "subtype6" "subtype4"
 [19] "subtype6" "subtype6" "subtype2" "subtype6" "subtype5" "subtype3"
 [25] "subtype3" "subtype1" "subtype3" "subtype1" "subtype6" "subtype1"
 [31] "subtype3" "subtype2" "subtype3" "subtype4" "subtype2" "subtype2"
 [37] "subtype1" "subtype2" "subtype4" "subtype4" "subtype6" "subtype1"
 [43] "subtype6" "subtype2" "subtype1" "subtype4" "subtype4" "subtype4"
 [49] "subtype4" "subtype5" "subtype2" "subtype1" "subtype4" "subtype5"
 [55] "subtype6" "subtype2" "subtype4" "subtype2" "subtype3" "subtype4"
 [61] "subtype6" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [67] "subtype3" "subtype6" "subtype1" "subtype1" "subtype6" "subtype1"
 [73] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype2"
 [79] "subtype4" "subtype4" "subtype1" "subtype1" "subtype3" "subtype5"
 [85] "subtype2" "subtype5" "subtype1" "subtype1" "subtype3" "subtype1"
 [91] "subtype4" "subtype4" "subtype6" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype2" "subtype6" "subtype2" "subtype3"
[103] "subtype1" "subtype1" "subtype3" "subtype1" "subtype4" "subtype4"
[109] "subtype3" "subtype2" "subtype3" "subtype2" "subtype6" "subtype4"
[115] "subtype3" "subtype1" "subtype4" "subtype6" "subtype6" "subtype2"
[121] "subtype6" "subtype4" "subtype6" "subtype1" "subtype2" "subtype1"
[127] "subtype6" "subtype2" "subtype5" "subtype2" "subtype2" "subtype6"
[133] "subtype6" "subtype2" "subtype4" "subtype3" "subtype3" "subtype2"
[139] "subtype2" "subtype2" "subtype4" "subtype1" "subtype3" "subtype6"
[145] "subtype4" "subtype4" "subtype2" "subtype6" "subtype4" "subtype1"
[151] "subtype6" "subtype4" "subtype3" "subtype2" "subtype4" "subtype4"
[157] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[163] "subtype6" "subtype1" "subtype2" "subtype4" "subtype3" "subtype3"
[169] "subtype1" "subtype4" "subtype4" "subtype1" "subtype4" "subtype3"
[175] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[181] "subtype5" "subtype1" "subtype4" "subtype2" "subtype6" "subtype1"
[187] "subtype3" "subtype4" "subtype6" "subtype3" "subtype1" "subtype4"
[193] "subtype4" "subtype1" "subtype1" "subtype6" "subtype2" "subtype2"
[199] "subtype2" "subtype2" "subtype6" "subtype3" "subtype1" "subtype1"
[205] "subtype2" "subtype3" "subtype5" "subtype3" "subtype6" "subtype6"
[211] "subtype1" "subtype3" "subtype2" "subtype4" "subtype2" "subtype3"
[217] "subtype6" "subtype2" "subtype1" "subtype3" "subtype4" "subtype3"
[223] "subtype6" "subtype4" "subtype5" "subtype2" "subtype4" "subtype3"
[229] "subtype1" "subtype6" "subtype5" "subtype3" "subtype1" "subtype2"
[235] "subtype6" "subtype3" "subtype3" "subtype2" "subtype2" "subtype6"
[241] "subtype6" "subtype1" "subtype3" "subtype5" "subtype6" "subtype1"
[247] "subtype5" "subtype1" "subtype4" "subtype2" "subtype3" "subtype2"
[253] "subtype2" "subtype4" "subtype2" "subtype1" "subtype6" "subtype1"
[259] "subtype5" "subtype4" "subtype4" "subtype3" "subtype1" "subtype4"
[265] "subtype2" "subtype1" "subtype2" "subtype4" "subtype2" "subtype4"
[271] "subtype1" "subtype2" "subtype4" "subtype2" "subtype4" "subtype4"
[277] "subtype2" "subtype1" "subtype2" "subtype6" "subtype4" "subtype1"
[283] "subtype2" "subtype2" "subtype6" "subtype2" "subtype2" "subtype2"
[289] "subtype4" "subtype4" "subtype6" "subtype6" "subtype3" "subtype5"
[295] "subtype3" "subtype6" "subtype3" "subtype2" "subtype4" "subtype3"
[301] "subtype6" "subtype1" "subtype2" "subtype4" "subtype4" "subtype5"
[307] "subtype4" "subtype5" "subtype2" "subtype4" "subtype1" "subtype4"
[313] "subtype4" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[319] "subtype4" "subtype3" "subtype6" "subtype2" "subtype2" "subtype6"
[325] "subtype1" "subtype3" "subtype4" "subtype4" "subtype2" "subtype6"
[331] "subtype3" "subtype3" "subtype2" "subtype3" "subtype6" "subtype4"
[337] "subtype4" "subtype1" "subtype4" "subtype6" "subtype1" "subtype3"
[343] "subtype6" "subtype5" "subtype5" "subtype2" "subtype2" "subtype4"
[349] "subtype1" "subtype2" "subtype6" "subtype5" "subtype3" "subtype3"
[355] "subtype4" "subtype1" "subtype6" "subtype6" "subtype2" "subtype6"
[361] "subtype3" "subtype6" "subtype6" "subtype5" "subtype1" "subtype4"
[367] "subtype4" "subtype4" "subtype4" "subtype3" "subtype4" "subtype6"
[373] "subtype4" "subtype4" "subtype4" "subtype3" "subtype3" "subtype6"
[379] "subtype4" "subtype1" "subtype6" "subtype3" "subtype3" "subtype3"
[385] "subtype3" "subtype6" "subtype4" "subtype2" "subtype2" "subtype3"
[391] "subtype3" "subtype5" "subtype4" "subtype3" "subtype1" "subtype1"
[397] "subtype1" "subtype3" "subtype5" "subtype2" "subtype2" "subtype2"
[403] "subtype4" "subtype4" "subtype2" "subtype2" "subtype4" "subtype3"
[409] "subtype2" "subtype2" "subtype4" "subtype4" "subtype5" "subtype3"
[415] "subtype1" "subtype5" "subtype5" "subtype2" "subtype1" "subtype2"
[421] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype4"
[427] "subtype4" "subtype4" "subtype3" "subtype6" "subtype3" "subtype5"
[433] "subtype1" "subtype3" "subtype1" "subtype6" "subtype2" "subtype6"
[439] "subtype6" "subtype3" "subtype2" "subtype4" "subtype2" "subtype2"
[445] "subtype4" "subtype2" "subtype2" "subtype6" "subtype4" "subtype4"
[451] "subtype2" "subtype6" "subtype4" "subtype2" "subtype4" "subtype2"
[457] "subtype2" "subtype1" "subtype5" "subtype2" "subtype2" "subtype4"
[463] "subtype1" "subtype1" "subtype6" "subtype2" "subtype6" "subtype6"
[469] "subtype2" "subtype3" "subtype4" "subtype2" "subtype4" "subtype4"
[475] "subtype6" "subtype6" "subtype6" "subtype2" "subtype4" "subtype4"
[481] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype4"
[487] "subtype5" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[493] "subtype1" "subtype1" "subtype3" "subtype3" "subtype6" "subtype4"
[499] "subtype2" "subtype1" "subtype4" "subtype2" "subtype5" "subtype2"
[505] "subtype6" "subtype3" "subtype4" "subtype4" "subtype6" "subtype2"
[511] "subtype3" "subtype2" "subtype4" "subtype4" "subtype4" "subtype1"
[517] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype6"
[523] "subtype1" "subtype2" "subtype3" "subtype6" "subtype2" "subtype2"
[529] "subtype4" "subtype3" "subtype6" "subtype2" "subtype2" "subtype6"
[535] "subtype6" "subtype3" "subtype4" "subtype3" "subtype2" "subtype6"
[541] "subtype6" "subtype4" "subtype2" "subtype2" "subtype3" "subtype4"
[547] "subtype6" "subtype1" "subtype4" "subtype4" "subtype3" "subtype2"
[553] "subtype6" "subtype2" "subtype1" "subtype2" "subtype4" "subtype6"
[559] "subtype1" "subtype4" "subtype1" "subtype3" "subtype3" "subtype2"
[565] "subtype4" "subtype6" "subtype1" "subtype5" "subtype4" "subtype4"
[571] "subtype4" "subtype3" "subtype6" "subtype3" "subtype3" "subtype4"
[577] "subtype1" "subtype2" "subtype4" "subtype6" "subtype4" "subtype6"
[583] "subtype6" "subtype6" "subtype6" "subtype4" "subtype3" "subtype5"
[589] "subtype6" "subtype6" "subtype3" "subtype3" "subtype5" "subtype1"
[595] "subtype6" "subtype6" "subtype2" "subtype2" "subtype1" "subtype2"
[601] "subtype6" "subtype6" "subtype2" "subtype2" "subtype3" "subtype3"
[607] "subtype2" "subtype6" "subtype5" "subtype1" "subtype5" "subtype6"
[613] "subtype4" "subtype1" "subtype4" "subtype6" "subtype4" "subtype3"
D4V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1       5        6        0        0        45        28         0
  subtype2      11       15        1        3        42        43         0
  subtype3       6        5        1        2        32        22         1
  subtype4       8        8        2        0        40        35         0
  subtype5       3        6        0        1        10         4         0
  subtype6      16       11        2        2        37        16         1
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE X
  subtype1         11          1          3        2       1
  subtype2         21          4         11        0       2
  subtype3         22          0          8        2       2
  subtype4         29          8          6        1       0
  subtype5          8          2          5        1       0
  subtype6         14          1          7        0       0
D4V3, multiclass
          vv
clus       T1 T2 T3 T4
  subtype1 17 70 12  3
  subtype2 46 83 20  3
  subtype3 19 63 19  2
  subtype4 32 81 16  8
  subtype5 11 22  5  2
  subtype6 47 47 12  1
D4V4, multiclass
          vv
clus       N0 N1 N2 N3
  subtype1 59 30 10  4
  subtype2 60 64 15 11
  subtype3 46 28 19  8
  subtype4 46 60 23  7
  subtype5 17 11  6  5
  subtype6 54 34 11  8
D4V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0  90   2  11
  subtype2        1 131   0  21
  subtype3        0  81   2  20
  subtype4        0 118   1  18
  subtype5        0  31   1   8
  subtype6        0  88   0  19
D4V6, multiclass
D4V7, binary
          cls
clus         0   1
  subtype1 103   0
  subtype2 152   1
  subtype3 100   3
  subtype4 136   1
  subtype5  38   2
  subtype6 107   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  103    0
  subtype2  152    1
  subtype3  100    3
  subtype4  136    1
  subtype5   38    2
  subtype6  107    0
          vv
clus       INFILTRATING CARCINOMA NOS INFILTRATING DUCTAL CARCINOMA
  subtype1                          1                            82
  subtype2                          0                            80
  subtype3                          0                            65
  subtype4                          0                           118
  subtype5                          0                            29
  subtype6                          0                            69
          vv
clus       INFILTRATING LOBULAR CARCINOMA MEDULLARY CARCINOMA
  subtype1                              3                   3
  subtype2                             46                   0
  subtype3                             33                   0
  subtype4                              6                   0
  subtype5                              8                   0
  subtype6                             31                   2
          vv
clus       MIXED HISTOLOGY (PLEASE SPECIFY) MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                                1                  0             12
  subtype2                               13                  6              8
  subtype3                                3                  0              2
  subtype4                                3                  4              6
  subtype5                                1                  1              1
  subtype6                                2                  1              2
D4V8, multiclass
D4V9, binary
          cls
clus         0   1
  subtype1  34  69
  subtype2  37 116
  subtype3  21  82
  subtype4  44  93
  subtype5   8  32
  subtype6  22  85
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   34   69
  subtype2   37  116
  subtype3   21   82
  subtype4   44   93
  subtype5    8   32
  subtype6   22   85
D4V10, continuous

Clustering(5) Variable = RPPA_CNMF
D5V1, survival
          sevent
clus2        0   1
  subtype1 111  25
  subtype2 119  13
  subtype3 100  13
subtype1 subtype2 subtype3 
     136      132      113 
subtype1 subtype2 subtype3 
      25       13       13 
$subtype1
TCGA-A1-A0SH TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U 
       47.24        31.79        28.01        17.98        73.84        22.03 
TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0CY 
       64.04        36.13        64.54        24.79        56.81        55.00 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0EQ TCGA-A2-A0EY TCGA-A2-A0SV 
       21.14        34.55        33.76        79.76        24.16        27.12 
TCGA-A2-A0SW TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE 
       44.84        50.43        17.52        17.10         7.96        18.18 
TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A7-A0CE TCGA-A7-A0CJ 
       21.86        21.63        18.58        31.69        35.31        30.58 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A06R TCGA-A8-A06U TCGA-A8-A06X 
       12.26         8.78        10.72        17.95        29.00        31.00 
TCGA-A8-A06Y TCGA-A8-A075 TCGA-A8-A07I TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07W 
       26.01        17.00        14.01         9.99         8.98         9.99 
TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A08X TCGA-A8-A09A TCGA-A8-A09I 
       37.05         9.99        30.97        33.99         9.99        33.07 
TCGA-A8-A09M TCGA-A8-A09R TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AN-A04D TCGA-AN-A0AK 
       15.02         8.98        14.01         0.99         1.71         7.33 
TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR TCGA-AN-A0AS TCGA-AN-A0AT TCGA-AN-A0FJ 
        6.48         0.16         0.30         0.30         0.33         7.92 
TCGA-AN-A0FL TCGA-AN-A0FV TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AN-A0XW TCGA-AO-A03L 
        7.56         0.33         0.53         0.33         5.59        80.28 
TCGA-AO-A03M TCGA-AO-A03O TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J6 TCGA-AO-A0JB 
       47.84        81.63        59.05        32.78        37.48        50.70 
TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D 
       72.00        76.73        55.33       102.54        96.10        64.04 
TCGA-AO-A12F TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0TU 
       48.36        82.88        49.32        37.41        55.20        11.84 
TCGA-AR-A0TV TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U0 TCGA-AR-A0U1 TCGA-AR-A0U3 
       29.72        24.30        55.86         0.26         6.08        74.40 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AT TCGA-AR-A1AY 
       75.55        61.84        43.53        43.04        41.82        20.19 
TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RU TCGA-B6-A0X1 
       32.78        12.13       176.98       140.84       131.21       186.44 
TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BF TCGA-BH-A0BW TCGA-BH-A0BZ TCGA-BH-A0C0 
       39.55        51.68        25.68        11.67        49.05        41.75 
TCGA-BH-A0C3 TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E2 TCGA-BH-A0EE TCGA-BH-A18G 
       48.13        48.23         4.37        14.30        31.00         2.01 
TCGA-BH-A18P TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18V TCGA-C8-A12Q 
       30.28        55.63        37.51         7.36        51.12        12.99 
TCGA-C8-A137 TCGA-C8-A138 TCGA-D8-A13Y TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 
        0.85         0.23        11.90        20.88        13.97        14.17 
TCGA-D8-A147 TCGA-E2-A14P TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 
       19.20        40.96        31.92        28.60        17.03        25.41 
TCGA-E2-A152 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ 
       27.12        14.79        25.05        60.53 

$subtype2
TCGA-A1-A0SJ TCGA-A2-A04V TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT TCGA-A2-A0CU 
       14.01        63.12        88.57        75.55        75.22         5.16 
TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EO TCGA-A2-A0EV 
       63.42        64.01        28.77        25.22        80.25        31.82 
TCGA-A2-A0SU TCGA-A2-A0T5 TCGA-A2-A0YD TCGA-A2-A0YI TCGA-A7-A0CD TCGA-A7-A0CH 
       54.61        17.46        25.28        14.50        38.30        35.47 
TCGA-A7-A0DB TCGA-A7-A13F TCGA-A8-A06Z TCGA-A8-A07S TCGA-A8-A07Z TCGA-A8-A082 
       33.07        12.72         1.02         7.96        28.04        18.05 
TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G TCGA-A8-A08T TCGA-A8-A08Z 
       36.95        13.02         0.99        19.92        93.04        40.01 
TCGA-A8-A091 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09E TCGA-A8-A09W 
       19.07         9.99        12.00         1.02        30.97         0.99 
TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AJ TCGA-AN-A0FD TCGA-AN-A0FF 
        0.23         0.62         2.93         7.99         6.41         4.60 
TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XO 
        6.97         6.02         0.36         0.33         0.33        12.33 
TCGA-AN-A0XP TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AO-A03N TCGA-AO-A03P TCGA-AO-A0J3 
        0.30         0.33         0.33        54.08        84.69        21.40 
TCGA-AO-A0J7 TCGA-AO-A0JC TCGA-AO-A0JG TCGA-AO-A126 TCGA-AO-A12A TCGA-AO-A12B 
       20.28        50.86        26.24        93.70        90.54        77.56 
TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AS 
       65.52        41.59        28.34         5.26        51.22        40.83 
TCGA-AR-A1AV TCGA-B6-A0IB TCGA-B6-A0IG TCGA-B6-A0IO TCGA-B6-A0RL TCGA-B6-A0RM 
       42.58       129.57       146.50       110.14        81.17        78.02 
TCGA-B6-A0RP TCGA-B6-A0X0 TCGA-BH-A0B1 TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BQ 
      102.77       129.70        37.74        21.70        36.72        27.16 
TCGA-BH-A0BS TCGA-BH-A0BV TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK 
       53.92        49.94        42.90        45.80        38.01        13.91 
TCGA-BH-A0DT TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0H5 TCGA-BH-A0H9 TCGA-BH-A0HA 
       38.47        44.78        24.49        35.51        41.00        52.96 
TCGA-BH-A0HK TCGA-BH-A0HL TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0W4 
        5.85         2.37        12.89        51.29        27.25         5.75 
TCGA-BH-A0W5 TCGA-BH-A18F TCGA-BH-A18N TCGA-BH-A18S TCGA-D8-A140 TCGA-D8-A145 
       42.35         8.81        37.74        66.05        13.25        13.48 
TCGA-D8-A146 TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10E 
       21.14        34.39        46.59        40.41        37.51        28.44 
TCGA-E2-A14O TCGA-E2-A14Q TCGA-E2-A14S TCGA-E2-A14W TCGA-E2-A153 TCGA-E2-A154 
       44.65        38.24        33.17        31.99        23.24        19.43 
TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15G 
       21.04        23.87        23.34        17.26        20.68        18.18 
TCGA-E2-A15H TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15P 
       12.92        19.36         9.01        20.58        12.99        19.56 
TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BC TCGA-E2-A1BD 
       17.06        14.07        14.99        29.95        16.47        17.10 

$subtype3
TCGA-A2-A04N TCGA-A2-A04Q TCGA-A2-A0CP TCGA-A2-A0CZ TCGA-A2-A0ER TCGA-A2-A0ES 
      104.81        41.92        92.48        53.10        74.37        37.05 
TCGA-A2-A0EU TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0ST TCGA-A2-A0T3 TCGA-A2-A0T4 
       34.29        29.72        24.72        99.19        18.71        20.52 
TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YK TCGA-A2-A0YL 
       18.90        20.75        32.52        15.42        19.30        14.63 
TCGA-A2-A0YT TCGA-A7-A0CG TCGA-A7-A0D9 TCGA-A8-A06P TCGA-A8-A076 TCGA-A8-A079 
       23.77        34.29        37.45        13.02        53.95         9.01 
TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07P TCGA-A8-A084 TCGA-A8-A08O TCGA-A8-A095 
       19.99        18.94        10.98        15.06        30.97        41.95 
TCGA-A8-A09K TCGA-A8-A0A4 TCGA-AN-A0FS TCGA-AN-A0FX TCGA-AN-A0XN TCGA-AO-A0J5 
       29.95        13.02         6.28         0.33         0.33        24.16 
TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JF TCGA-AO-A0JI TCGA-AO-A0JJ TCGA-AO-A0JM 
       22.36        53.00        21.37        38.53        62.04        71.80 
TCGA-AO-A128 TCGA-AO-A12E TCGA-AQ-A04L TCGA-AR-A0TX TCGA-AR-A0TZ TCGA-AR-A0U2 
       94.59        57.27       130.09         0.49        43.17        83.87 
TCGA-AR-A0U4 TCGA-AR-A1AJ TCGA-AR-A1AL TCGA-AR-A1AP TCGA-AR-A1AU TCGA-AR-A1AW 
       53.49        52.73        48.82        39.95        46.32        35.24 
TCGA-AR-A1AX TCGA-B6-A0I2 TCGA-B6-A0I8 TCGA-B6-A0IK TCGA-B6-A0RG TCGA-B6-A0RH 
       36.26       143.34        24.62        18.77        68.45       188.98 
TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RQ TCGA-B6-A0RT TCGA-B6-A0RV TCGA-B6-A0WX 
      172.96       162.02       140.48        89.46       157.41        21.47 
TCGA-BH-A0AU TCGA-BH-A0AV TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B4 
       24.53        38.79        25.55        28.50        46.92        39.16 
TCGA-BH-A0B5 TCGA-BH-A0B7 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BO TCGA-BH-A0BP 
       48.36        56.98        37.22        32.02        35.67        48.69 
TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0C1 TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DP 
       53.65        45.57        43.99        23.44        22.13        15.65 
TCGA-BH-A0DS TCGA-BH-A0DV TCGA-BH-A0E1 TCGA-BH-A0E6 TCGA-BH-A0E9 TCGA-BH-A0EA 
        2.53        45.17        15.68         9.60        46.19        32.65 
TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0HN TCGA-BH-A0HP 
       24.43        30.35        24.56        23.05        16.96        13.61 
TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A18J TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18U 
       50.76         5.59        20.09        26.66        72.56        51.39 
TCGA-E2-A108 TCGA-E2-A10C TCGA-E2-A14T TCGA-E2-A14V TCGA-E2-A15C TCGA-E2-A15F 
       27.52        40.08        33.30        34.22        22.78        21.60 
TCGA-E2-A15M TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1B6 
        7.69        53.62        53.03        32.32        28.47 

subtype1 subtype2 subtype3 
    0.16     0.23     0.33 
subtype1 subtype2 subtype3 
  186.44   146.50   188.98 
subtype1 subtype2 subtype3 
  28.305   25.760   33.300 
[1] "0.2 - 186.4 (28.3)" "0.2 - 146.5 (25.8)" "0.3 - 189.0 (33.3)"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[331] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[337] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[361] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[379] "subtype3" "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[331] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[337] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[361] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[379] "subtype3" "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
  [7] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
 [73] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [91] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [97] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[109] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[121] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[217] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[235] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[277] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[283] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[289] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[295] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[307] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[313] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[319] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[331] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[337] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[361] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[379] "subtype3" "subtype2" "subtype2"
D5V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1       6        8        0        55        36         24          2
  subtype2      12       12        1        46        38         14          6
  subtype3      13       10        3        36        20         24          5
          vv
clus       STAGE IIIC STAGE IV STAGE X
  subtype1         10        8       3
  subtype2          1        3       3
  subtype3          4        3       2
D5V3, multiclass
          vv
clus        T1  T2  T3  T4
  subtype1  20 106  22   4
  subtype2  35  83  11   6
  subtype3  38  57  17   8
D5V4, multiclass
          vv
clus       N0 N1 N2 N3
  subtype1 70 45 22 12
  subtype2 65 53 10  6
  subtype3 57 34 20  7
D5V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 143   8   1
  subtype2        0 129   3   4
  subtype3        1 114   3   2
D5V6, multiclass
D5V7, binary
          cls
clus         0   1
  subtype1 152   0
  subtype2 132   4
  subtype3 119   1
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  152    0
  subtype2  132    4
  subtype3  119    1
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      152      132      119
  MALE          0        4        1
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                           139                              4
  subtype2                           120                              5
  subtype3                            94                             21
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   1                                1
  subtype2                   0                                4
  subtype3                   0                                3
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  0              7
  subtype2                  2              5
  subtype3                  0              2
D5V8, multiclass
D5V9, binary
          cls
clus         0   1
  subtype1  49 103
  subtype2  42  94
  subtype3  38  82
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   49  103
  subtype2   42   94
  subtype3   38   82
     clus
vv    subtype1 subtype2 subtype3
  NO        49       42       38
  YES      103       94       82
D5V10, continuous

Clustering(6) Variable = RPPA_CHIERARCHICAL
D6V1, survival
          sevent
clus2        0   1
  subtype1 132  20
  subtype2 100  12
  subtype3  98  19
subtype1 subtype2 subtype3 
     152      112      117 
subtype1 subtype2 subtype3 
      20       12       19 
$subtype1
TCGA-A1-A0SH TCGA-A2-A04V TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0CT 
       47.24        63.12        36.13        88.57        75.55        75.22 
TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CW TCGA-A2-A0CY TCGA-A2-A0D3 TCGA-A2-A0D4 
        5.16        63.42        64.01        55.00        28.77        25.22 
TCGA-A2-A0EO TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0T5 TCGA-A2-A0YD TCGA-A2-A0YH 
       80.25        27.12        44.84        17.46        25.28        21.63 
TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0DB TCGA-A7-A13F TCGA-A8-A06R 
       38.30        35.47        30.58        33.07        12.72        17.95 
TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z TCGA-A8-A07S TCGA-A8-A07W 
       29.00        31.00        26.01         1.02         7.96         9.99 
TCGA-A8-A07Z TCGA-A8-A082 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08G 
       28.04        18.05        36.95        13.02         0.99        19.92 
TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A091 TCGA-A8-A099 TCGA-A8-A09A TCGA-A8-A09C 
       93.04        40.01        19.07         9.99         9.99         1.02 
TCGA-A8-A09E TCGA-A8-A09M TCGA-A8-A09R TCGA-A8-A09W TCGA-A8-A0A4 TCGA-AN-A04A 
       30.97        15.02         8.98         0.99        13.02         2.93 
TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF 
        7.99         7.33         0.16         0.30         6.41         4.60 
TCGA-AN-A0FK TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XO TCGA-AN-A0XP 
        6.97         0.36         0.33         0.33        12.33         0.30 
TCGA-AN-A0XS TCGA-AN-A0XT TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A03N 
        0.33         0.33         5.59        80.28        47.84        54.08 
TCGA-AO-A03O TCGA-AO-A03P TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0JB TCGA-AO-A0JC 
       81.63        84.69        21.40        20.28        50.70        50.86 
TCGA-AO-A0JD TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A126 TCGA-AO-A12A TCGA-AO-A12B 
       72.00        26.24        62.04        93.70        90.54        77.56 
TCGA-AO-A12E TCGA-AO-A12G TCGA-AO-A12H TCGA-AR-A0TR TCGA-AR-A0TT TCGA-AR-A0TV 
       57.27        41.59        28.34         5.26        55.20        29.72 
TCGA-AR-A0TW TCGA-AR-A0TY TCGA-AR-A0U3 TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AV 
       24.30        55.86        74.40        39.95        40.83        42.58 
TCGA-B6-A0IB TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RP TCGA-B6-A0X0 TCGA-BH-A0BF 
      129.57        81.17        78.02       102.77       129.70        25.68 
TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BV TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0C3 
       27.16        53.92        49.94        49.05        41.75        48.13 
TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DT TCGA-BH-A0E2 
       42.90        45.80        38.01        13.91        38.47        14.30 
TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0H5 TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HK 
       44.78        24.49        35.51        41.00        52.96         5.85 
TCGA-BH-A0HL TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0W4 TCGA-BH-A0W5 
        2.37        12.89        51.29        27.25         5.75        42.35 
TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A146 
       37.74        30.28        66.05        11.90        13.25        21.14 
TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A14Q 
       34.39        46.59        40.41        37.51        28.44        38.24 
TCGA-E2-A14S TCGA-E2-A14W TCGA-E2-A14Z TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 
       33.17        31.99        17.03        23.24        19.43        21.04 
TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15D TCGA-E2-A15E TCGA-E2-A15G TCGA-E2-A15J 
       23.87        23.34        17.26        20.68        18.18        19.36 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T 
        9.01        20.58        12.99        17.06        14.07        14.99 
TCGA-E2-A1B4 TCGA-E2-A1BD 
       29.95        17.10 

$subtype2
TCGA-A1-A0SJ TCGA-A2-A04N TCGA-A2-A04Q TCGA-A2-A0CP TCGA-A2-A0CZ TCGA-A2-A0ER 
       14.01       104.81        41.92        92.48        53.10        74.37 
TCGA-A2-A0ES TCGA-A2-A0EU TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SU 
       37.05        34.29        31.82        29.72        24.72        54.61 
TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YF 
       18.71        20.52        18.90        20.75        32.52        15.42 
TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A0YT TCGA-A7-A0CG TCGA-A7-A0D9 
       14.50        19.30        14.63        23.77        34.29        37.45 
TCGA-A8-A06P TCGA-A8-A079 TCGA-A8-A07E TCGA-A8-A07F TCGA-A8-A07P TCGA-A8-A084 
       13.02         9.01        19.99        18.94        10.98        15.06 
TCGA-A8-A08O TCGA-A8-A095 TCGA-A8-A09B TCGA-A8-A09K TCGA-AN-A041 TCGA-AN-A049 
       30.97        41.95        12.00        29.95         0.23         0.62 
TCGA-AN-A0FS TCGA-AN-A0XN TCGA-AO-A0J5 TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JF 
        6.28         0.33        24.16        22.36        53.00        21.37 
TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A12C TCGA-AQ-A04L TCGA-AR-A0TZ TCGA-AR-A1AK 
       38.53        71.80        65.52       130.09        43.17        51.22 
TCGA-AR-A1AL TCGA-AR-A1AU TCGA-AR-A1AW TCGA-AR-A1AX TCGA-B6-A0I2 TCGA-B6-A0I8 
       48.82        46.32        35.24        36.26       143.34        24.62 
TCGA-B6-A0IG TCGA-B6-A0IK TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RN TCGA-B6-A0RO 
      146.50        18.77       110.14        68.45       172.96       162.02 
TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-BH-A0AU TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 
      140.48       157.41        24.53        25.55        28.50        46.92 
TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B5 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ 
       37.74        39.16        48.36        37.22        32.02        21.70 
TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0C1 
       36.72        35.67        48.69        53.65        45.57        43.99 
TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DP TCGA-BH-A0DS TCGA-BH-A0DV TCGA-BH-A0E1 
       23.44        22.13        15.65         2.53        45.17        15.68 
TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0H6 TCGA-BH-A0H7 
       46.19        32.65        24.43        30.35        24.56        23.05 
TCGA-BH-A0HN TCGA-BH-A0HP TCGA-BH-A0HY TCGA-BH-A0RX TCGA-BH-A18F TCGA-BH-A18J 
       16.96        13.61        50.76         5.59         8.81        20.09 
TCGA-BH-A18L TCGA-BH-A18M TCGA-BH-A18U TCGA-D8-A145 TCGA-E2-A108 TCGA-E2-A10C 
       26.66        72.56        51.39        13.48        27.52        40.08 
TCGA-E2-A14O TCGA-E2-A14T TCGA-E2-A15C TCGA-E2-A15F TCGA-E2-A15M TCGA-E2-A15P 
       44.65        33.30        22.78        21.60         7.69        19.56 
TCGA-E2-A1B0 TCGA-E2-A1B1 TCGA-E2-A1B5 TCGA-E2-A1BC 
       53.62        53.03        32.32        16.47 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A2-A04P TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04W 
       31.79        28.01        17.98        73.84        22.03        64.04 
TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CX TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 
       64.54        24.79        56.81        21.14        34.55        33.76 
TCGA-A2-A0EQ TCGA-A2-A0EY TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T1 
       79.76        24.16        99.19        50.43        17.52        17.10 
TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YG TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A7-A0CE 
        7.96        18.18        21.86        18.58        31.69        35.31 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A07I 
       12.26         8.78        10.72        17.00        53.95        14.01 
TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A08X 
        9.99         8.98        37.05         9.99        30.97        33.99 
TCGA-A8-A09I TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AR 
       33.07        14.01         0.99         1.71         6.48         0.30 
TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FX 
        0.33         7.92         7.56         6.02         0.33         0.33 
TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J6 TCGA-AO-A0JE 
        0.53         0.33        59.05        32.78        37.48        76.73 
TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F 
       55.33       102.54        94.59        96.10        64.04        48.36 
TCGA-AR-A0TP TCGA-AR-A0TQ TCGA-AR-A0TS TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 
       82.88        49.32        37.41        11.84         0.49         0.26 
TCGA-AR-A0U1 TCGA-AR-A0U2 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ 
        6.08        83.87        53.49        75.55        61.84        52.73 
TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AT TCGA-AR-A1AY TCGA-B6-A0I6 TCGA-B6-A0I9 
       43.53        43.04        41.82        20.19        32.78        12.13 
TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RH TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      176.98       140.84       188.98        89.46       131.21        21.47 
TCGA-B6-A0X1 TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BW 
      186.44        38.79        39.55        56.98        51.68        11.67 
TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A18G TCGA-BH-A18Q 
       48.23         4.37         9.60        31.00         2.01        55.63 
TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18V TCGA-C8-A12Q TCGA-C8-A137 TCGA-C8-A138 
       37.51         7.36        51.12        12.99         0.85         0.23 
TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-E2-A14P TCGA-E2-A14V 
       20.88        13.97        14.17        19.20        40.96        34.22 
TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A152 TCGA-E2-A158 TCGA-E2-A159 
       31.92        28.60        25.41        27.12        14.79        25.05 
TCGA-E2-A15H TCGA-E2-A1AZ TCGA-E2-A1B6 
       12.92        60.53        28.47 

subtype1 subtype2 subtype3 
    0.16     0.23     0.23 
subtype1 subtype2 subtype3 
  129.70   172.96   188.98 
subtype1 subtype2 subtype3 
  28.190   31.395   28.600 
[1] "0.2 - 129.7 (28.2)" "0.2 - 173.0 (31.4)" "0.2 - 189.0 (28.6)"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[325] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[331] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[337] "subtype1" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[343] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[349] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[367] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[379] "subtype3" "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[325] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[331] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[337] "subtype1" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[343] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[349] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[367] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[379] "subtype3" "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [31] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
 [49] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
 [61] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [73] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [85] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[109] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[157] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[169] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[175] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[193] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[223] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[229] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[241] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[265] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[271] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[307] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[319] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[325] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[331] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[337] "subtype1" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[343] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[349] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[361] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[367] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[373] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[379] "subtype3" "subtype2" "subtype1"
D6V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE IIA STAGE IIB STAGE IIIA STAGE IIIB
  subtype1      15       11        1        52        42         23          7
  subtype2      11       12        3        31        21         23          5
  subtype3       5        7        0        54        31         16          1
          vv
clus       STAGE IIIC STAGE IV STAGE X
  subtype1          2        6       4
  subtype2          4        3       2
  subtype3          9        5       2
D6V3, multiclass
          vv
clus        T1  T2  T3  T4
  subtype1  36 101  18   7
  subtype2  37  53  17   8
  subtype3  20  92  15   3
D6V4, multiclass
          vv
clus       N0 N1 N2 N3
  subtype1 78 55 19  7
  subtype2 51 37 18  7
  subtype3 63 40 15 11
D6V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 153   6   4
  subtype2        1 109   3   2
  subtype3        0 124   5   1
D6V6, multiclass
D6V7, binary
          cls
clus         0   1
  subtype1 159   4
  subtype2 114   1
  subtype3 130   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  159    4
  subtype2  114    1
  subtype3  130    0
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      159      114      130
  MALE          4        1        0
          vv
clus       INFILTRATING DUCTAL CARCINOMA INFILTRATING LOBULAR CARCINOMA
  subtype1                           143                              8
  subtype2                            91                             19
  subtype3                           119                              3
          vv
clus       MEDULLARY CARCINOMA MIXED HISTOLOGY (PLEASE SPECIFY)
  subtype1                   0                                5
  subtype2                   0                                3
  subtype3                   1                                0
          vv
clus       MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                  2              5
  subtype2                  0              2
  subtype3                  0              7
D6V8, multiclass
D6V9, binary
          cls
clus         0   1
  subtype1  48 115
  subtype2  37  78
  subtype3  44  86
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   48  115
  subtype2   37   78
  subtype3   44   86
     clus
vv    subtype1 subtype2 subtype3
  NO        48       37       44
  YES      115       78       86
D6V10, continuous

Clustering(7) Variable = MRNASEQ_CNMF
D7V1, survival
          sevent
clus2        0   1
  subtype1 143  24
  subtype2 125  11
  subtype3 182  17
  subtype4 108  28
  subtype5 180  25
  subtype6  39   4
  subtype7  11   3
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 
     167      136      199      136      205       43       14 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 
      24       11       17       28       25        4        3 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q 
        8.52        31.79        28.01        19.17        17.98        41.92 
TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A0CM TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D2 
       73.84        22.03        24.79        55.00        21.14        33.76 
TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ 
       99.19        50.43        17.52         7.96        18.18        18.58 
TCGA-A2-A0YM TCGA-A2-A1G1 TCGA-A2-A25F TCGA-A2-A3XS TCGA-A2-A3XT TCGA-A2-A3XU 
       31.69        19.17        10.59        33.93        83.01        29.98 
TCGA-A2-A3XW TCGA-A2-A3XX TCGA-A2-A3XY TCGA-A2-A3Y0 TCGA-A2-A4RX TCGA-A7-A0CE 
       49.48        38.40        34.98        38.33         9.01        35.31 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26G TCGA-A7-A26I TCGA-A7-A3IY 
       12.26         8.78        10.72        10.95        12.13         4.96 
TCGA-A7-A3J0 TCGA-A7-A4SD TCGA-A7-A4SE TCGA-A7-A5ZV TCGA-A8-A07C TCGA-A8-A07O 
        2.50         5.52        12.20         6.90        19.07         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08R TCGA-A8-A08X TCGA-AC-A2BK TCGA-AC-A2QH 
        8.98         9.96         0.99        33.99        38.53         1.02 
TCGA-AC-A2QJ TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AT TCGA-AN-A0FJ 
        2.27         1.71         6.48         0.16         0.33         7.92 
TCGA-AN-A0FL TCGA-AN-A0FX TCGA-AN-A0G0 TCGA-AN-A0XN TCGA-AN-A0XU TCGA-AO-A03U 
        7.56         0.33         0.53         0.33         0.33        59.05 
TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 
       17.65        37.48        55.33       102.54        94.59        96.10 
TCGA-AO-A12F TCGA-AO-A1KR TCGA-AQ-A04J TCGA-AQ-A54N TCGA-AR-A0TP TCGA-AR-A0TS 
       48.36        70.36        26.93         2.53        82.88        37.41 
TCGA-AR-A0TU TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ 
       11.84         0.26        53.49        75.55        61.84        52.73 
TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24Q TCGA-AR-A251 
       43.53        43.04        17.19        20.19        66.02        45.14 
TCGA-AR-A256 TCGA-AR-A2LR TCGA-AR-A5QQ TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 
       93.83        20.38        10.59        77.62       143.34        32.78 
TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      176.98       140.84       211.53        89.46       131.21        21.47 
TCGA-B6-A0X1 TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B9 TCGA-BH-A0BG 
      186.44       101.52        38.79        39.55        51.68        24.85 
TCGA-BH-A0BL TCGA-BH-A0BW TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0RX 
       44.02        11.67        48.23         4.37         9.60         5.59 
TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18Q TCGA-BH-A18T TCGA-BH-A18V TCGA-BH-A1F0 
       23.05         2.01        55.63         7.36        51.12        25.81 
TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN TCGA-C8-A1HJ TCGA-C8-A27B TCGA-D8-A142 
       97.48       114.12        72.07         0.16         0.99        13.97 
TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1XK TCGA-D8-A1XQ 
       14.17        19.20        20.09        19.40        10.72        16.41 
TCGA-D8-A1XW TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14N TCGA-E2-A14R 
       12.66         7.46         4.60         4.73        47.15        38.60 
TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ 
       31.92        28.60        25.41        14.79        25.05        60.53 
TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK 
       28.47        33.70        18.87       106.72       102.61         8.75 
TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E2-A573 TCGA-E9-A22G TCGA-E9-A243 TCGA-E9-A244 
       43.04        15.45        22.26        10.19        17.06         0.66 
TCGA-E9-A3QA TCGA-E9-A5FL TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P7 TCGA-EW-A1P8 
        0.62         0.26        22.82        29.82        30.08         7.86 
TCGA-EW-A1PB TCGA-EW-A1PH TCGA-EW-A3U0 TCGA-GI-A2C9 TCGA-GM-A2DF TCGA-GM-A3XL 
       19.99        19.92        17.49       110.07        42.71        69.30 
TCGA-LL-A441 TCGA-OL-A5D7 TCGA-OL-A5RW TCGA-OL-A5S0 TCGA-OL-A66I 
        2.99        46.55        26.20         9.80        23.70 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SH TCGA-A2-A0CP TCGA-A2-A0CR 
       14.37        43.40        48.10        47.24        92.48       107.93 
TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0EO TCGA-A2-A0ES TCGA-A2-A0EW TCGA-A2-A0EX 
       63.42        53.10        80.25        37.05        29.72        24.72 
TCGA-A2-A0SU TCGA-A2-A0T7 TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1G0 TCGA-A2-A1G6 
       54.61        20.75        19.30        14.63        20.25        16.47 
TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A4RY TCGA-A7-A0CG 
       52.44       107.70        20.88        39.62         8.81        34.29 
TCGA-A7-A13H TCGA-A7-A26E TCGA-A7-A426 TCGA-A8-A08O TCGA-A8-A097 TCGA-A8-A09A 
       29.56        13.84        11.97        30.97        12.00         9.99 
TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-AC-A23G TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG 
       13.02        21.04        10.82         1.45        55.40        36.99 
TCGA-AC-A2FK TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3YI TCGA-AN-A0FS TCGA-AO-A03L 
       38.79         1.15         9.40         1.51         6.28        80.28 
TCGA-AO-A03M TCGA-AO-A03R TCGA-AO-A0JG TCGA-AO-A12A TCGA-AO-A12C TCGA-AO-A12E 
       47.84        68.75        26.24        90.54        65.52        57.27 
TCGA-AO-A12G TCGA-AO-A1KO TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AM TCGA-AR-A1AX 
       41.59        14.73        51.22        48.82        62.56        36.26 
TCGA-AR-A24M TCGA-AR-A24O TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A255 TCGA-AR-A2LH 
       65.42        65.65        53.26        50.96        34.78        20.22 
TCGA-AR-A2LM TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-AR-A5QP TCGA-B6-A0IE TCGA-B6-A0IH 
       40.01        20.81        16.96        20.45        65.69       112.37 
TCGA-B6-A0RO TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-BH-A0AZ 
      162.02       140.48       157.41       113.75        58.88        28.50 
TCGA-BH-A0B1 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO 
       37.74        37.22        32.02        21.70        36.72        35.67 
TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DK TCGA-BH-A0DO TCGA-BH-A0E9 TCGA-BH-A0H3 
       23.44        22.13        13.91        17.26        46.19        37.78 
TCGA-BH-A0H5 TCGA-BH-A0HF TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0W4 TCGA-BH-A0W5 
       35.51        23.90        13.61        36.85         5.75        42.35 
TCGA-BH-A18M TCGA-BH-A18R TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A201 
       72.56        37.51       120.62        74.73        36.92         6.87 
TCGA-BH-A28O TCGA-BH-A42U TCGA-BH-A42V TCGA-C8-A1HI TCGA-D8-A145 TCGA-D8-A1JB 
       10.62       109.25         8.91         0.07        13.48        18.71 
TCGA-D8-A1JH TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A27I TCGA-D8-A27L TCGA-D8-A27P 
       14.01         8.94         6.61        14.43         4.11         0.76 
TCGA-D8-A27V TCGA-D8-A3Z5 TCGA-D8-A4Z1 TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A15C 
       12.53        14.50         7.33        38.24        43.33        22.78 
TCGA-E2-A15E TCGA-E2-A15H TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1IF TCGA-E2-A1IJ 
       20.68        12.92        19.56        53.03        37.41        28.41 
TCGA-E2-A1IO TCGA-E9-A1RI TCGA-EW-A1IW TCGA-EW-A1J2 TCGA-EW-A1PF TCGA-EW-A1PG 
       20.94        13.94        12.20        13.25        14.43        34.52 
TCGA-EW-A2FV TCGA-EW-A424 TCGA-GM-A2DI TCGA-GM-A3XG TCGA-GM-A5PV TCGA-LL-A440 
       14.04        10.59        61.91        32.25        13.55         0.66 
TCGA-MS-A51U TCGA-OL-A5DA TCGA-OL-A5RV TCGA-OL-A5RX 
        2.79        44.58        24.10        16.87 

$subtype3
TCGA-A1-A0SG TCGA-A2-A04N TCGA-A2-A0CQ TCGA-A2-A0CS TCGA-A2-A0D3 TCGA-A2-A0EM 
       14.24       104.81        88.57        75.55        28.77       101.69 
TCGA-A2-A0EN TCGA-A2-A0EV TCGA-A2-A0T5 TCGA-A2-A0T6 TCGA-A2-A0YC TCGA-A2-A0YD 
       89.33        31.82        17.46        18.90        32.52        25.28 
TCGA-A2-A0YF TCGA-A2-A0YI TCGA-A2-A1FZ TCGA-A2-A4S2 TCGA-A7-A0CH TCGA-A7-A0CJ 
       15.42        14.50        22.45         6.74        35.47        30.58 
TCGA-A7-A0DB TCGA-A7-A13G TCGA-A7-A26H TCGA-A7-A2KD TCGA-A7-A3J1 TCGA-A8-A06P 
       33.07        11.44        13.12        12.82        11.28        13.02 
TCGA-A8-A06T TCGA-A8-A06Y TCGA-A8-A07F TCGA-A8-A07G TCGA-A8-A07S TCGA-A8-A08C 
       41.06        26.01        18.94        18.94         7.96        19.96 
TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08Z TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A099 
       19.07        93.04        40.01        17.92        41.95         9.99 
TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09T TCGA-A8-A09V TCGA-A8-A0A1 TCGA-A8-A0A2 
       12.00         1.02        19.00        15.02        12.00        19.00 
TCGA-A8-A0A9 TCGA-A8-A0AB TCGA-A8-A0AD TCGA-AC-A23E TCGA-AC-A2B8 TCGA-AC-A2QI 
       13.02        17.00        38.04         2.37         1.45         0.92 
TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3TN TCGA-AC-A3YJ TCGA-AN-A03Y TCGA-AN-A046 
        0.99         0.69         1.12         1.28         0.33         0.33 
TCGA-AN-A0FF TCGA-AN-A0FK TCGA-AN-A0FN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR 
        4.60         6.97         7.17        12.33         0.30         0.33 
TCGA-AN-A0XS TCGA-AN-A0XV TCGA-AO-A0J8 TCGA-AO-A0JF TCGA-AO-A125 TCGA-AO-A12B 
        0.33         5.33        22.36        21.37        99.22        77.56 
TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AR-A0TR TCGA-AR-A1AS TCGA-AR-A1AV TCGA-AR-A24K 
       15.62        13.22         5.26        40.83        42.58        50.89 
TCGA-AR-A24N TCGA-AR-A24P TCGA-AR-A24S TCGA-AR-A24X TCGA-AR-A2LE TCGA-AR-A2LL 
       68.19         0.85        62.07        48.16       128.65         7.33 
TCGA-B6-A0I5 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IP TCGA-B6-A0RI 
      149.56       220.87       129.57        50.70       110.93       234.25 
TCGA-B6-A0RN TCGA-B6-A0RP TCGA-B6-A0WS TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A1KI 
      172.96       102.77        97.48       129.57       129.70        73.51 
TCGA-B6-A2IU TCGA-BH-A0B0 TCGA-BH-A0B5 TCGA-BH-A0BD TCGA-BH-A0BQ TCGA-BH-A0BS 
      170.17        46.92        48.36        18.21        27.16        53.92 
TCGA-BH-A0BV TCGA-BH-A0DH TCGA-BH-A0DP TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0E1 
       49.94        38.01        15.65         2.53        38.47        15.68 
TCGA-BH-A0EA TCGA-BH-A0EB TCGA-BH-A0H6 TCGA-BH-A0HI TCGA-BH-A0HN TCGA-BH-A0HO 
       32.65        24.49        24.56        20.35        16.96         2.50 
TCGA-BH-A0HU TCGA-BH-A0W3 TCGA-BH-A0W7 TCGA-BH-A18I TCGA-BH-A18S TCGA-BH-A1EO 
       12.89        23.93        44.81         7.23        66.05        91.99 
TCGA-BH-A1ET TCGA-BH-A1FD TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A28Q TCGA-BH-A2L8 
       82.85        33.14        63.35        55.00         6.44        20.12 
TCGA-C8-A26V TCGA-C8-A26W TCGA-D8-A141 TCGA-D8-A146 TCGA-D8-A1JD TCGA-D8-A1JE 
        0.30         0.23        20.58        21.14        18.15        18.90 
TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1XC TCGA-D8-A1XM 
       21.01        12.20         7.76         2.79         2.66        17.69 
TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XY 
        7.96        15.85        16.31        12.99        15.12         2.66 
TCGA-D8-A1Y1 TCGA-D8-A27E TCGA-D8-A27K TCGA-D8-A27T TCGA-D8-A3Z6 TCGA-E2-A107 
        3.78        17.42         9.44        13.05         6.05        34.39 
TCGA-E2-A10B TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14O TCGA-E2-A153 TCGA-E2-A154 
       37.51        28.44        28.87        44.65        23.24        19.43 
TCGA-E2-A156 TCGA-E2-A15D TCGA-E2-A15G TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K 
       23.87        17.26        18.18        17.39        19.36         9.01 
TCGA-E2-A15L TCGA-E2-A1B4 TCGA-E2-A1BD TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN 
       20.58        29.95        17.10        22.62         3.85        22.19 
TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A2P6 TCGA-E2-A3DX 
       11.08        54.18        39.62        19.63         5.49        15.72 
TCGA-E2-A570 TCGA-E9-A1NI TCGA-E9-A1R3 TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD 
       18.05        10.09         2.10        20.78        40.37         0.66 
TCGA-E9-A227 TCGA-E9-A229 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A3HO TCGA-E9-A3X8 
        0.79        13.28         0.92         0.33        13.08        15.72 
TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1P3 TCGA-EW-A1P5 
       39.72         8.48        16.57        15.68        52.96        23.11 
TCGA-EW-A1P6 TCGA-EW-A1PE TCGA-GM-A2D9 TCGA-GM-A2DM TCGA-GM-A2DN TCGA-GM-A3NY 
       18.48        10.52        59.57        76.64        77.33        38.20 
TCGA-GM-A3XN TCGA-GM-A5PX TCGA-JL-A3YX TCGA-LL-A442 TCGA-LL-A50Y TCGA-OL-A5RU 
       53.92        18.12        11.57         3.58         6.90        27.65 
TCGA-OL-A66K 
       33.90 

$subtype4
TCGA-A1-A0SI TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A2-A04W TCGA-A2-A04X TCGA-A2-A0CX 
       20.84         7.96        39.32        64.04        55.43        56.81 
TCGA-A2-A0D1 TCGA-A2-A0EY TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0T1 TCGA-A2-A0YG 
       34.55        24.16        27.12        44.84        17.10        21.86 
TCGA-A2-A3XV TCGA-A2-A3XZ TCGA-A7-A26F TCGA-A7-A56D TCGA-A8-A06Q TCGA-A8-A06R 
       14.07        31.96        15.09         5.82         1.02        17.95 
TCGA-A8-A06U TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A07B TCGA-A8-A07E TCGA-A8-A07I 
       29.00        17.00        53.95        33.01        19.99        14.01 
TCGA-A8-A084 TCGA-A8-A08B TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08P TCGA-A8-A092 
       15.06        23.08        37.05         9.99        30.97        16.01 
TCGA-A8-A09I TCGA-A8-A09N TCGA-A8-A09W TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AC-A23C 
       33.07         1.02         0.99        14.01         0.99         0.95 
TCGA-AC-A23H TCGA-AN-A04C TCGA-AN-A0AJ TCGA-AN-A0AS TCGA-AN-A0FT TCGA-AN-A0FV 
        2.66         1.78         7.99         0.30         6.02         0.33 
TCGA-AO-A03N TCGA-AO-A0J2 TCGA-AO-A0JA TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JM 
       54.08        32.78        21.53        72.00        76.73        71.80 
TCGA-AO-A12D TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AR-A0TX TCGA-AR-A1AP TCGA-AR-A1AT 
       64.04       130.09         5.62         0.49        39.95        41.82 
TCGA-AR-A24U TCGA-AR-A250 TCGA-AR-A254 TCGA-B6-A0I8 TCGA-B6-A0I9 TCGA-B6-A0IG 
       53.36        56.12        39.85        24.62        12.13       146.50 
TCGA-B6-A0IK TCGA-B6-A0RH TCGA-B6-A0RS TCGA-B6-A0WW TCGA-B6-A1KN TCGA-BH-A0AW 
       18.77       188.98       100.67        17.95       139.17        20.45 
TCGA-BH-A0B7 TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0BZ TCGA-BH-A0C0 TCGA-BH-A0C1 
       56.98        53.65        45.57        49.05        41.75        43.99 
TCGA-BH-A0DX TCGA-BH-A0DZ TCGA-BH-A0EE TCGA-BH-A0GY TCGA-BH-A0HY TCGA-BH-A18J 
       47.41        16.27        31.00        30.35        50.76        20.09 
TCGA-BH-A18K TCGA-BH-A18P TCGA-BH-A18U TCGA-BH-A1EN TCGA-BH-A1EV TCGA-BH-A1EX 
       90.81        30.28        51.39        69.93        12.00        49.58 
TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1FU TCGA-BH-A202 TCGA-BH-A203 TCGA-BH-A208 
       17.69        31.53        72.07         0.72        38.60        57.83 
TCGA-C8-A12Q TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A26X 
       12.99         0.85         0.23         0.23         0.07         0.36 
TCGA-C8-A26Y TCGA-C8-A274 TCGA-C8-A275 TCGA-C8-A278 TCGA-C8-A3M7 TCGA-D8-A13Z 
        0.43         0.03         0.03         0.03         0.03        20.88 
TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JJ 
       14.17        17.49        16.50        12.03        12.03        20.09 
TCGA-D8-A1JK TCGA-D8-A1JN TCGA-D8-A1XJ TCGA-D8-A1XT TCGA-D8-A27N TCGA-E2-A10C 
       20.12        20.38        11.57         6.35         4.77        40.08 
TCGA-E2-A14P TCGA-E2-A14V TCGA-E2-A152 TCGA-E2-A1B0 TCGA-E2-A1LB TCGA-E2-A1LE 
       40.96        34.22        27.12        53.62        40.47        28.90 
TCGA-E2-A2P5 TCGA-E9-A1R5 TCGA-E9-A1RF TCGA-E9-A1RH TCGA-E9-A226 TCGA-E9-A248 
       16.90         1.38         6.54        20.55        20.61         1.91 
TCGA-EW-A1PC TCGA-EW-A2FR TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DH TCGA-JL-A3YW 
        6.12        55.00        53.10        43.04        42.28        11.84 
TCGA-LL-A5YL TCGA-OL-A5D6 TCGA-OL-A5RY TCGA-OL-A5RZ 
        5.52        12.66        14.10        10.29 

$subtype5
TCGA-A1-A0SJ TCGA-A1-A0SQ TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04Y TCGA-A2-A0CT 
       14.01        18.18        82.16        63.12        36.13        75.22 
TCGA-A2-A0CU TCGA-A2-A0CW TCGA-A2-A0D4 TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EU 
        5.16        64.01        25.22        74.37        35.05        34.29 
TCGA-A2-A0T3 TCGA-A2-A0T4 TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A2-A1FV TCGA-A2-A1FW 
       18.71        20.52        21.63        23.77        23.47        17.36 
TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E TCGA-A2-A4RW 
       36.79        19.56        16.31        17.19        91.92         7.30 
TCGA-A2-A4S0 TCGA-A2-A4S3 TCGA-A7-A0CD TCGA-A7-A0D9 TCGA-A7-A13F TCGA-A7-A26J 
        8.91         3.42        38.30        37.45        12.72        12.13 
TCGA-A7-A3IZ TCGA-A7-A3RF TCGA-A7-A4SB TCGA-A7-A4SF TCGA-A8-A06O TCGA-A8-A06X 
       10.59        13.41         6.58        12.13        13.02        31.00 
TCGA-A8-A06Z TCGA-A8-A079 TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07W TCGA-A8-A082 
        1.02         9.01        17.00        10.98         9.99        18.05 
TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08F TCGA-A8-A08G TCGA-A8-A08I TCGA-A8-A091 
       36.95        13.02        18.05        19.92        12.00        19.07 
TCGA-A8-A09D TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09Q TCGA-A8-A09R TCGA-AC-A2BM 
       13.02        29.95        15.02        25.02         8.98        38.20 
TCGA-AC-A2FM TCGA-AN-A03X TCGA-AN-A041 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A0AK 
       26.04         0.33         0.23         0.62         2.93         7.33 
TCGA-AN-A0FD TCGA-AN-A0FW TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XT TCGA-AN-A0XW 
        6.41         0.36         0.33         0.33         0.33         5.59 
TCGA-AO-A03P TCGA-AO-A03T TCGA-AO-A03V TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0JI 
       84.69        47.87        29.13        21.40        20.28        38.53 
TCGA-AO-A126 TCGA-AO-A12H TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT 
       93.70        28.34        82.62        61.87         0.53        17.79 
TCGA-AQ-A04H TCGA-AQ-A54O TCGA-AR-A0TQ TCGA-AR-A0TT TCGA-AR-A0TV TCGA-AR-A0TW 
       24.79        21.86        49.32        55.20        29.72        24.30 
TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AU TCGA-AR-A24H 
       55.86        43.17        83.87        74.40        46.32       109.58 
TCGA-AR-A24L TCGA-AR-A24R TCGA-AR-A24V TCGA-AR-A24Z TCGA-AR-A252 TCGA-AR-A2LK 
       73.02        57.37        54.18        51.75        40.64        42.84 
TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RL TCGA-B6-A0RM 
      126.12        84.59       110.14        68.45        81.17        78.02 
TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-BH-A0AU 
      188.68        79.63        28.24        68.94        43.59        24.53 
TCGA-BH-A0B4 TCGA-BH-A0B8 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DE TCGA-BH-A0E2 
       39.16        51.58        42.90        45.80        31.17        14.30 
TCGA-BH-A0E7 TCGA-BH-A0EI TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H7 TCGA-BH-A0H9 
       44.78        24.43        10.78        15.16        23.05        41.00 
TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HL TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A18L 
       52.96        26.50         2.37        51.29        27.25        26.66 
TCGA-BH-A18N TCGA-BH-A1ES TCGA-BH-A1EW TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FG 
       37.74       113.82        55.69        89.16        24.66       122.89 
TCGA-BH-A1FM TCGA-BH-A1FR TCGA-BH-A204 TCGA-BH-A42T TCGA-C8-A1HN TCGA-C8-A26Z 
       45.63       144.59        83.31         0.99         0.07         0.13 
TCGA-C8-A273 TCGA-C8-A27A TCGA-C8-A3M8 TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A1JC 
        0.20        12.20         0.23        11.90        13.25        15.78 
TCGA-D8-A1JI TCGA-D8-A1JT TCGA-D8-A1X5 TCGA-D8-A1X9 TCGA-D8-A1XA TCGA-D8-A1XD 
       18.97        13.32         5.62        12.49         9.01         5.10 
TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XZ TCGA-D8-A1Y0 TCGA-D8-A1Y3 TCGA-D8-A27R 
        6.48         6.44         3.95         5.46         4.08         2.96 
TCGA-D8-A27W TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A14S 
        0.49        43.00        59.41        46.59        40.41        33.17 
TCGA-E2-A14T TCGA-E2-A14W TCGA-E2-A155 TCGA-E2-A15A TCGA-E2-A15F TCGA-E2-A15O 
       33.30        31.99        21.04        23.34        21.60        12.99 
TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IH 
       17.06        14.07        14.99        38.30        32.78        33.73 
TCGA-E2-A1L7 TCGA-E2-A1LA TCGA-E2-A56Z TCGA-E9-A1R2 TCGA-E9-A1R4 TCGA-E9-A1R6 
       27.42        24.59         7.20         0.62         6.08         2.76 
TCGA-E9-A1R7 TCGA-E9-A1RE TCGA-E9-A245 TCGA-E9-A247 TCGA-E9-A295 TCGA-E9-A2JS 
       21.17        21.63         0.82         0.39         0.69        17.75 
TCGA-E9-A5UO TCGA-EW-A1J1 TCGA-EW-A1J6 TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ 
        0.23        18.90        28.77        29.95        29.85        40.41 
TCGA-EW-A1P0 TCGA-EW-A1PA TCGA-EW-A1PD TCGA-EW-A2FS TCGA-EW-A2FW TCGA-EW-A423 
       41.10        18.90        13.94        46.75        22.09        10.16 
TCGA-GI-A2C8 TCGA-GM-A2DC TCGA-GM-A2DK TCGA-GM-A2DO TCGA-GM-A3NW TCGA-OL-A5D8 
        6.97        53.52        62.33        53.33       110.50         7.53 
TCGA-OL-A66H 
       14.73 

$subtype6
TCGA-A2-A0CK TCGA-A2-A0CO TCGA-A2-A0EP TCGA-A2-A0SY TCGA-A7-A425 TCGA-A7-A4SA 
      125.56       112.04       107.61        44.28        14.66         7.92 
TCGA-A7-A4SC TCGA-A8-A07J TCGA-AC-A2FO TCGA-AC-A3W6 TCGA-AN-A0XL TCGA-AO-A0J5 
        7.07        12.00        50.70         1.68         0.33        24.16 
TCGA-AO-A0J9 TCGA-AO-A0JJ TCGA-AR-A1AN TCGA-AR-A2LN TCGA-AR-A5QM TCGA-AR-A5QN 
       53.00        62.04        43.69        17.06        54.71        16.01 
TCGA-BH-A0AY TCGA-BH-A0BP TCGA-BH-A0C3 TCGA-BH-A0DQ TCGA-BH-A0DV TCGA-BH-A0HK 
       25.55        48.69        48.13         3.22        45.17         5.85 
TCGA-BH-A18F TCGA-BH-A1EU TCGA-D8-A1JU TCGA-D8-A27G TCGA-E2-A108 TCGA-E2-A15M 
        8.81        42.28        14.70        13.45        27.52         7.69 
TCGA-E2-A1B5 TCGA-E2-A1BC TCGA-E9-A1R0 TCGA-E9-A2JT TCGA-E9-A3Q9 TCGA-E9-A5FK 
       32.32        16.47        14.27         0.76        18.41         0.39 
TCGA-EW-A3E8 TCGA-GM-A2DA TCGA-GM-A2DL TCGA-GM-A4E0 TCGA-LQ-A4E4 TCGA-OK-A5Q2 
       21.27       194.27        90.81        57.63        15.91         2.10 
TCGA-OL-A66J 
       54.51 

$subtype7
TCGA-A2-A0CL TCGA-A2-A0EQ TCGA-A2-A25D TCGA-AO-A03O TCGA-AO-A0JC TCGA-AR-A1AW 
       64.54        79.76        18.15        81.63        50.86        35.24 
TCGA-BH-A0B6 TCGA-BH-A0BF TCGA-BH-A209 TCGA-C8-A1HM TCGA-D8-A1XL TCGA-D8-A1Y2 
       56.94        25.68       130.16         0.20        10.49         2.37 
TCGA-E2-A14Z TCGA-EW-A1OV 
       17.03        25.94 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 
    0.16     0.07     0.23     0.03     0.07     0.33     0.20 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 
  211.53   162.02   234.25   188.98   188.68   194.27   130.16 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 subtype7 
   22.82    29.03    18.94    20.58    23.34    21.27    30.59 
[1] "0.2 - 211.5 (22.8)" "0.1 - 162.0 (29.0)" "0.2 - 234.2 (18.9)"
[4] "0.0 - 189.0 (20.6)" "0.1 - 188.7 (23.3)" "0.3 - 194.3 (21.3)"
[7] "0.2 - 130.2 (30.6)"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype4" "subtype5" "subtype1" "subtype4" "subtype4" "subtype1"
 [13] "subtype1" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
 [19] "subtype1" "subtype1" "subtype5" "subtype4" "subtype4" "subtype5"
 [25] "subtype6" "subtype7" "subtype1" "subtype6" "subtype2" "subtype3"
 [31] "subtype2" "subtype3" "subtype5" "subtype5" "subtype2" "subtype5"
 [37] "subtype4" "subtype1" "subtype2" "subtype1" "subtype4" "subtype1"
 [43] "subtype3" "subtype5" "subtype3" "subtype3" "subtype2" "subtype6"
 [49] "subtype7" "subtype5" "subtype2" "subtype5" "subtype5" "subtype3"
 [55] "subtype2" "subtype2" "subtype4" "subtype1" "subtype2" "subtype4"
 [61] "subtype4" "subtype1" "subtype6" "subtype1" "subtype4" "subtype1"
 [67] "subtype5" "subtype5" "subtype3" "subtype3" "subtype2" "subtype3"
 [73] "subtype3" "subtype1" "subtype3" "subtype4" "subtype5" "subtype3"
 [79] "subtype1" "subtype2" "subtype2" "subtype1" "subtype5" "subtype5"
 [85] "subtype5" "subtype5" "subtype3" "subtype2" "subtype1" "subtype5"
 [91] "subtype2" "subtype2" "subtype2" "subtype5" "subtype5" "subtype7"
 [97] "subtype5" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[103] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype4"
[109] "subtype1" "subtype5" "subtype1" "subtype2" "subtype5" "subtype3"
[115] "subtype5" "subtype5" "subtype1" "subtype2" "subtype3" "subtype3"
[121] "subtype5" "subtype1" "subtype3" "subtype1" "subtype1" "subtype5"
[127] "subtype3" "subtype2" "subtype2" "subtype4" "subtype1" "subtype3"
[133] "subtype1" "subtype5" "subtype3" "subtype1" "subtype5" "subtype1"
[139] "subtype3" "subtype5" "subtype6" "subtype2" "subtype6" "subtype5"
[145] "subtype6" "subtype1" "subtype1" "subtype5" "subtype4" "subtype1"
[151] "subtype5" "subtype3" "subtype4" "subtype4" "subtype3" "subtype4"
[157] "subtype5" "subtype3" "subtype5" "subtype4" "subtype4" "subtype5"
[163] "subtype4" "subtype1" "subtype4" "subtype3" "subtype3" "subtype4"
[169] "subtype6" "subtype5" "subtype1" "subtype5" "subtype1" "subtype3"
[175] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[181] "subtype4" "subtype3" "subtype5" "subtype5" "subtype5" "subtype4"
[187] "subtype4" "subtype2" "subtype4" "subtype1" "subtype3" "subtype3"
[193] "subtype1" "subtype3" "subtype5" "subtype4" "subtype3" "subtype3"
[199] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype5"
[205] "subtype4" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[211] "subtype3" "subtype3" "subtype4" "subtype4" "subtype3" "subtype3"
[217] "subtype2" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[223] "subtype4" "subtype3" "subtype2" "subtype4" "subtype3" "subtype1"
[229] "subtype5" "subtype2" "subtype2" "subtype2" "subtype2" "subtype5"
[235] "subtype6" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype2" "subtype3" "subtype6" "subtype2" "subtype3"
[247] "subtype5" "subtype3" "subtype5" "subtype3" "subtype5" "subtype5"
[253] "subtype4" "subtype1" "subtype4" "subtype5" "subtype1" "subtype1"
[259] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype3"
[265] "subtype1" "subtype3" "subtype2" "subtype4" "subtype4" "subtype5"
[271] "subtype1" "subtype5" "subtype5" "subtype1" "subtype6" "subtype1"
[277] "subtype3" "subtype3" "subtype3" "subtype3" "subtype5" "subtype1"
[283] "subtype3" "subtype5" "subtype2" "subtype2" "subtype4" "subtype7"
[289] "subtype5" "subtype2" "subtype5" "subtype1" "subtype5" "subtype4"
[295] "subtype5" "subtype1" "subtype6" "subtype1" "subtype5" "subtype3"
[301] "subtype6" "subtype4" "subtype7" "subtype4" "subtype4" "subtype3"
[307] "subtype2" "subtype5" "subtype6" "subtype1" "subtype4" "subtype1"
[313] "subtype3" "subtype5" "subtype1" "subtype1" "subtype2" "subtype3"
[319] "subtype2" "subtype4" "subtype2" "subtype1" "subtype2" "subtype5"
[325] "subtype2" "subtype5" "subtype5" "subtype1" "subtype5" "subtype5"
[331] "subtype5" "subtype1" "subtype4" "subtype4" "subtype3" "subtype3"
[337] "subtype1" "subtype5" "subtype1" "subtype5" "subtype3" "subtype1"
[343] "subtype5" "subtype1" "subtype5" "subtype5" "subtype4" "subtype5"
[349] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype6"
[361] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype4"
[367] "subtype5" "subtype3" "subtype7" "subtype2" "subtype1" "subtype5"
[373] "subtype3" "subtype5" "subtype2" "subtype3" "subtype2" "subtype3"
[379] "subtype1" "subtype5" "subtype3" "subtype2" "subtype4" "subtype5"
[385] "subtype2" "subtype3" "subtype5" "subtype4" "subtype1" "subtype5"
[391] "subtype4" "subtype2" "subtype1" "subtype3" "subtype2" "subtype5"
[397] "subtype3" "subtype2" "subtype6" "subtype2" "subtype2" "subtype1"
[403] "subtype6" "subtype6" "subtype2" "subtype1" "subtype1" "subtype1"
[409] "subtype3" "subtype1" "subtype4" "subtype4" "subtype3" "subtype3"
[415] "subtype3" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[421] "subtype5" "subtype5" "subtype5" "subtype3" "subtype1" "subtype1"
[427] "subtype5" "subtype4" "subtype3" "subtype5" "subtype5" "subtype3"
[433] "subtype2" "subtype3" "subtype2" "subtype4" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype5" "subtype5" "subtype4" "subtype1"
[445] "subtype2" "subtype3" "subtype3" "subtype1" "subtype5" "subtype5"
[451] "subtype2" "subtype5" "subtype1" "subtype3" "subtype4" "subtype3"
[457] "subtype5" "subtype1" "subtype4" "subtype6" "subtype2" "subtype3"
[463] "subtype2" "subtype1" "subtype5" "subtype3" "subtype7" "subtype4"
[469] "subtype5" "subtype1" "subtype2" "subtype2" "subtype3" "subtype7"
[475] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype6"
[481] "subtype3" "subtype4" "subtype3" "subtype4" "subtype3" "subtype1"
[487] "subtype4" "subtype4" "subtype4" "subtype6" "subtype5" "subtype5"
[493] "subtype5" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[499] "subtype2" "subtype3" "subtype6" "subtype3" "subtype3" "subtype6"
[505] "subtype4" "subtype4" "subtype1" "subtype3" "subtype5" "subtype1"
[511] "subtype5" "subtype2" "subtype3" "subtype3" "subtype4" "subtype5"
[517] "subtype4" "subtype5" "subtype5" "subtype2" "subtype2" "subtype3"
[523] "subtype5" "subtype5" "subtype5" "subtype5" "subtype2" "subtype3"
[529] "subtype6" "subtype5" "subtype3" "subtype3" "subtype2" "subtype2"
[535] "subtype3" "subtype5" "subtype5" "subtype4" "subtype1" "subtype3"
[541] "subtype2" "subtype2" "subtype3" "subtype1" "subtype6" "subtype1"
[547] "subtype3" "subtype4" "subtype4" "subtype5" "subtype2" "subtype5"
[553] "subtype4" "subtype1" "subtype2" "subtype3" "subtype1" "subtype4"
[559] "subtype1" "subtype4" "subtype3" "subtype5" "subtype3" "subtype6"
[565] "subtype4" "subtype5" "subtype4" "subtype4" "subtype1" "subtype4"
[571] "subtype5" "subtype1" "subtype5" "subtype2" "subtype1" "subtype3"
[577] "subtype2" "subtype5" "subtype2" "subtype3" "subtype3" "subtype5"
[583] "subtype1" "subtype5" "subtype4" "subtype2" "subtype4" "subtype4"
[589] "subtype5" "subtype4" "subtype7" "subtype2" "subtype3" "subtype3"
[595] "subtype5" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[601] "subtype2" "subtype1" "subtype4" "subtype4" "subtype7" "subtype5"
[607] "subtype3" "subtype3" "subtype4" "subtype4" "subtype5" "subtype5"
[613] "subtype4" "subtype4" "subtype4" "subtype5" "subtype1" "subtype4"
[619] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype1"
[625] "subtype1" "subtype2" "subtype3" "subtype1" "subtype4" "subtype4"
[631] "subtype4" "subtype2" "subtype5" "subtype3" "subtype3" "subtype4"
[637] "subtype4" "subtype2" "subtype5" "subtype4" "subtype4" "subtype1"
[643] "subtype1" "subtype4" "subtype3" "subtype3" "subtype5" "subtype6"
[649] "subtype5" "subtype3" "subtype3" "subtype2" "subtype5" "subtype5"
[655] "subtype2" "subtype3" "subtype5" "subtype5" "subtype5" "subtype4"
[661] "subtype1" "subtype7" "subtype3" "subtype3" "subtype1" "subtype3"
[667] "subtype3" "subtype4" "subtype3" "subtype3" "subtype1" "subtype3"
[673] "subtype5" "subtype5" "subtype3" "subtype7" "subtype5" "subtype3"
[679] "subtype1" "subtype6" "subtype1" "subtype2" "subtype3" "subtype2"
[685] "subtype1" "subtype4" "subtype2" "subtype5" "subtype3" "subtype2"
[691] "subtype5" "subtype2" "subtype3" "subtype2" "subtype5" "subtype5"
[697] "subtype3" "subtype6" "subtype5" "subtype5" "subtype3" "subtype4"
[703] "subtype3" "subtype3" "subtype1" "subtype3" "subtype4" "subtype2"
[709] "subtype1" "subtype5" "subtype5" "subtype2" "subtype4" "subtype5"
[715] "subtype1" "subtype1" "subtype7" "subtype1" "subtype4" "subtype3"
[721] "subtype3" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
[727] "subtype2" "subtype3" "subtype2" "subtype5" "subtype3" "subtype2"
[733] "subtype3" "subtype3" "subtype3" "subtype3" "subtype6" "subtype5"
[739] "subtype2" "subtype5" "subtype5" "subtype5" "subtype1" "subtype4"
[745] "subtype2" "subtype3" "subtype6" "subtype1" "subtype6" "subtype3"
[751] "subtype5" "subtype2" "subtype5" "subtype5" "subtype1" "subtype2"
[757] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[763] "subtype5" "subtype3" "subtype3" "subtype5" "subtype4" "subtype4"
[769] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[775] "subtype4" "subtype3" "subtype3" "subtype5" "subtype3" "subtype1"
[781] "subtype3" "subtype6" "subtype5" "subtype3" "subtype5" "subtype4"
[787] "subtype5" "subtype5" "subtype3" "subtype3" "subtype3" "subtype5"
[793] "subtype4" "subtype4" "subtype2" "subtype4" "subtype3" "subtype3"
[799] "subtype1" "subtype1" "subtype1" "subtype5" "subtype5" "subtype4"
[805] "subtype3" "subtype3" "subtype5" "subtype5" "subtype6" "subtype3"
[811] "subtype6" "subtype1" "subtype3" "subtype6" "subtype1" "subtype5"
[817] "subtype2" "subtype3" "subtype3" "subtype5" "subtype2" "subtype3"
[823] "subtype3" "subtype5" "subtype7" "subtype1" "subtype5" "subtype5"
[829] "subtype5" "subtype5" "subtype3" "subtype1" "subtype3" "subtype3"
[835] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype5"
[841] "subtype3" "subtype2" "subtype2" "subtype1" "subtype4" "subtype5"
[847] "subtype2" "subtype5" "subtype6" "subtype1" "subtype5" "subtype2"
[853] "subtype5" "subtype1" "subtype3" "subtype6" "subtype4" "subtype5"
[859] "subtype4" "subtype1" "subtype4" "subtype2" "subtype5" "subtype6"
[865] "subtype3" "subtype3" "subtype5" "subtype5" "subtype3" "subtype2"
[871] "subtype1" "subtype3" "subtype6" "subtype2" "subtype3" "subtype4"
[877] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype4"
[883] "subtype6" "subtype2" "subtype6" "subtype4" "subtype1" "subtype5"
[889] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype4"
[895] "subtype4" "subtype1" "subtype5" "subtype1" "subtype6" "subtype3"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype4" "subtype5" "subtype1" "subtype4" "subtype4" "subtype1"
 [13] "subtype1" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
 [19] "subtype1" "subtype1" "subtype5" "subtype4" "subtype4" "subtype5"
 [25] "subtype6" "subtype7" "subtype1" "subtype6" "subtype2" "subtype3"
 [31] "subtype2" "subtype3" "subtype5" "subtype5" "subtype2" "subtype5"
 [37] "subtype4" "subtype1" "subtype2" "subtype1" "subtype4" "subtype1"
 [43] "subtype3" "subtype5" "subtype3" "subtype3" "subtype2" "subtype6"
 [49] "subtype7" "subtype5" "subtype2" "subtype5" "subtype5" "subtype3"
 [55] "subtype2" "subtype2" "subtype4" "subtype1" "subtype2" "subtype4"
 [61] "subtype4" "subtype1" "subtype6" "subtype1" "subtype4" "subtype1"
 [67] "subtype5" "subtype5" "subtype3" "subtype3" "subtype2" "subtype3"
 [73] "subtype3" "subtype1" "subtype3" "subtype4" "subtype5" "subtype3"
 [79] "subtype1" "subtype2" "subtype2" "subtype1" "subtype5" "subtype5"
 [85] "subtype5" "subtype5" "subtype3" "subtype2" "subtype1" "subtype5"
 [91] "subtype2" "subtype2" "subtype2" "subtype5" "subtype5" "subtype7"
 [97] "subtype5" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[103] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype4"
[109] "subtype1" "subtype5" "subtype1" "subtype2" "subtype5" "subtype3"
[115] "subtype5" "subtype5" "subtype1" "subtype2" "subtype3" "subtype3"
[121] "subtype5" "subtype1" "subtype3" "subtype1" "subtype1" "subtype5"
[127] "subtype3" "subtype2" "subtype2" "subtype4" "subtype1" "subtype3"
[133] "subtype1" "subtype5" "subtype3" "subtype1" "subtype5" "subtype1"
[139] "subtype3" "subtype5" "subtype6" "subtype2" "subtype6" "subtype5"
[145] "subtype6" "subtype1" "subtype1" "subtype5" "subtype4" "subtype1"
[151] "subtype5" "subtype3" "subtype4" "subtype4" "subtype3" "subtype4"
[157] "subtype5" "subtype3" "subtype5" "subtype4" "subtype4" "subtype5"
[163] "subtype4" "subtype1" "subtype4" "subtype3" "subtype3" "subtype4"
[169] "subtype6" "subtype5" "subtype1" "subtype5" "subtype1" "subtype3"
[175] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[181] "subtype4" "subtype3" "subtype5" "subtype5" "subtype5" "subtype4"
[187] "subtype4" "subtype2" "subtype4" "subtype1" "subtype3" "subtype3"
[193] "subtype1" "subtype3" "subtype5" "subtype4" "subtype3" "subtype3"
[199] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype5"
[205] "subtype4" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[211] "subtype3" "subtype3" "subtype4" "subtype4" "subtype3" "subtype3"
[217] "subtype2" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[223] "subtype4" "subtype3" "subtype2" "subtype4" "subtype3" "subtype1"
[229] "subtype5" "subtype2" "subtype2" "subtype2" "subtype2" "subtype5"
[235] "subtype6" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype2" "subtype3" "subtype6" "subtype2" "subtype3"
[247] "subtype5" "subtype3" "subtype5" "subtype3" "subtype5" "subtype5"
[253] "subtype4" "subtype1" "subtype4" "subtype5" "subtype1" "subtype1"
[259] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype3"
[265] "subtype1" "subtype3" "subtype2" "subtype4" "subtype4" "subtype5"
[271] "subtype1" "subtype5" "subtype5" "subtype1" "subtype6" "subtype1"
[277] "subtype3" "subtype3" "subtype3" "subtype3" "subtype5" "subtype1"
[283] "subtype3" "subtype5" "subtype2" "subtype2" "subtype4" "subtype7"
[289] "subtype5" "subtype2" "subtype5" "subtype1" "subtype5" "subtype4"
[295] "subtype5" "subtype1" "subtype6" "subtype1" "subtype5" "subtype3"
[301] "subtype6" "subtype4" "subtype7" "subtype4" "subtype4" "subtype3"
[307] "subtype2" "subtype5" "subtype6" "subtype1" "subtype4" "subtype1"
[313] "subtype3" "subtype5" "subtype1" "subtype1" "subtype2" "subtype3"
[319] "subtype2" "subtype4" "subtype2" "subtype1" "subtype2" "subtype5"
[325] "subtype2" "subtype5" "subtype5" "subtype1" "subtype5" "subtype5"
[331] "subtype5" "subtype1" "subtype4" "subtype4" "subtype3" "subtype3"
[337] "subtype1" "subtype5" "subtype1" "subtype5" "subtype3" "subtype1"
[343] "subtype5" "subtype1" "subtype5" "subtype5" "subtype4" "subtype5"
[349] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype6"
[361] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype4"
[367] "subtype5" "subtype3" "subtype7" "subtype2" "subtype1" "subtype5"
[373] "subtype3" "subtype5" "subtype2" "subtype3" "subtype2" "subtype3"
[379] "subtype1" "subtype5" "subtype3" "subtype2" "subtype4" "subtype5"
[385] "subtype2" "subtype3" "subtype5" "subtype4" "subtype1" "subtype5"
[391] "subtype4" "subtype2" "subtype1" "subtype3" "subtype2" "subtype5"
[397] "subtype3" "subtype2" "subtype6" "subtype2" "subtype2" "subtype1"
[403] "subtype6" "subtype6" "subtype2" "subtype1" "subtype1" "subtype1"
[409] "subtype3" "subtype1" "subtype4" "subtype4" "subtype3" "subtype3"
[415] "subtype3" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[421] "subtype5" "subtype5" "subtype5" "subtype3" "subtype1" "subtype1"
[427] "subtype5" "subtype4" "subtype3" "subtype5" "subtype5" "subtype3"
[433] "subtype2" "subtype3" "subtype2" "subtype4" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype5" "subtype5" "subtype4" "subtype1"
[445] "subtype2" "subtype3" "subtype3" "subtype1" "subtype5" "subtype5"
[451] "subtype2" "subtype5" "subtype1" "subtype3" "subtype4" "subtype3"
[457] "subtype5" "subtype1" "subtype4" "subtype6" "subtype2" "subtype3"
[463] "subtype2" "subtype1" "subtype5" "subtype3" "subtype7" "subtype4"
[469] "subtype5" "subtype1" "subtype2" "subtype2" "subtype3" "subtype7"
[475] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype6"
[481] "subtype3" "subtype4" "subtype3" "subtype4" "subtype3" "subtype1"
[487] "subtype4" "subtype4" "subtype4" "subtype6" "subtype5" "subtype5"
[493] "subtype5" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[499] "subtype2" "subtype3" "subtype6" "subtype3" "subtype3" "subtype6"
[505] "subtype4" "subtype4" "subtype1" "subtype3" "subtype5" "subtype1"
[511] "subtype5" "subtype2" "subtype3" "subtype3" "subtype4" "subtype5"
[517] "subtype4" "subtype5" "subtype5" "subtype2" "subtype2" "subtype3"
[523] "subtype5" "subtype5" "subtype5" "subtype5" "subtype2" "subtype3"
[529] "subtype6" "subtype5" "subtype3" "subtype3" "subtype2" "subtype2"
[535] "subtype3" "subtype5" "subtype5" "subtype4" "subtype1" "subtype3"
[541] "subtype2" "subtype2" "subtype3" "subtype1" "subtype6" "subtype1"
[547] "subtype3" "subtype4" "subtype4" "subtype5" "subtype2" "subtype5"
[553] "subtype4" "subtype1" "subtype2" "subtype3" "subtype1" "subtype4"
[559] "subtype1" "subtype4" "subtype3" "subtype5" "subtype3" "subtype6"
[565] "subtype4" "subtype5" "subtype4" "subtype4" "subtype1" "subtype4"
[571] "subtype5" "subtype1" "subtype5" "subtype2" "subtype1" "subtype3"
[577] "subtype2" "subtype5" "subtype2" "subtype3" "subtype3" "subtype5"
[583] "subtype1" "subtype5" "subtype4" "subtype2" "subtype4" "subtype4"
[589] "subtype5" "subtype4" "subtype7" "subtype2" "subtype3" "subtype3"
[595] "subtype5" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[601] "subtype2" "subtype1" "subtype4" "subtype4" "subtype7" "subtype5"
[607] "subtype3" "subtype3" "subtype4" "subtype4" "subtype5" "subtype5"
[613] "subtype4" "subtype4" "subtype4" "subtype5" "subtype1" "subtype4"
[619] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype1"
[625] "subtype1" "subtype2" "subtype3" "subtype1" "subtype4" "subtype4"
[631] "subtype4" "subtype2" "subtype5" "subtype3" "subtype3" "subtype4"
[637] "subtype4" "subtype2" "subtype5" "subtype4" "subtype4" "subtype1"
[643] "subtype1" "subtype4" "subtype3" "subtype3" "subtype5" "subtype6"
[649] "subtype5" "subtype3" "subtype3" "subtype2" "subtype5" "subtype5"
[655] "subtype2" "subtype3" "subtype5" "subtype5" "subtype5" "subtype4"
[661] "subtype1" "subtype7" "subtype3" "subtype3" "subtype1" "subtype3"
[667] "subtype3" "subtype4" "subtype3" "subtype3" "subtype1" "subtype3"
[673] "subtype5" "subtype5" "subtype3" "subtype7" "subtype5" "subtype3"
[679] "subtype1" "subtype6" "subtype1" "subtype2" "subtype3" "subtype2"
[685] "subtype1" "subtype4" "subtype2" "subtype5" "subtype3" "subtype2"
[691] "subtype5" "subtype2" "subtype3" "subtype2" "subtype5" "subtype5"
[697] "subtype3" "subtype6" "subtype5" "subtype5" "subtype3" "subtype4"
[703] "subtype3" "subtype3" "subtype1" "subtype3" "subtype4" "subtype2"
[709] "subtype1" "subtype5" "subtype5" "subtype2" "subtype4" "subtype5"
[715] "subtype1" "subtype1" "subtype7" "subtype1" "subtype4" "subtype3"
[721] "subtype3" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
[727] "subtype2" "subtype3" "subtype2" "subtype5" "subtype3" "subtype2"
[733] "subtype3" "subtype3" "subtype3" "subtype3" "subtype6" "subtype5"
[739] "subtype2" "subtype5" "subtype5" "subtype5" "subtype1" "subtype4"
[745] "subtype2" "subtype3" "subtype6" "subtype1" "subtype6" "subtype3"
[751] "subtype5" "subtype2" "subtype5" "subtype5" "subtype1" "subtype2"
[757] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[763] "subtype5" "subtype3" "subtype3" "subtype5" "subtype4" "subtype4"
[769] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[775] "subtype4" "subtype3" "subtype3" "subtype5" "subtype3" "subtype1"
[781] "subtype3" "subtype6" "subtype5" "subtype3" "subtype5" "subtype4"
[787] "subtype5" "subtype5" "subtype3" "subtype3" "subtype3" "subtype5"
[793] "subtype4" "subtype4" "subtype2" "subtype4" "subtype3" "subtype3"
[799] "subtype1" "subtype1" "subtype1" "subtype5" "subtype5" "subtype4"
[805] "subtype3" "subtype3" "subtype5" "subtype5" "subtype6" "subtype3"
[811] "subtype6" "subtype1" "subtype3" "subtype6" "subtype1" "subtype5"
[817] "subtype2" "subtype3" "subtype3" "subtype5" "subtype2" "subtype3"
[823] "subtype3" "subtype5" "subtype7" "subtype1" "subtype5" "subtype5"
[829] "subtype5" "subtype5" "subtype3" "subtype1" "subtype3" "subtype3"
[835] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype5"
[841] "subtype3" "subtype2" "subtype2" "subtype1" "subtype4" "subtype5"
[847] "subtype2" "subtype5" "subtype6" "subtype1" "subtype5" "subtype2"
[853] "subtype5" "subtype1" "subtype3" "subtype6" "subtype4" "subtype5"
[859] "subtype4" "subtype1" "subtype4" "subtype2" "subtype5" "subtype6"
[865] "subtype3" "subtype3" "subtype5" "subtype5" "subtype3" "subtype2"
[871] "subtype1" "subtype3" "subtype6" "subtype2" "subtype3" "subtype4"
[877] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype4"
[883] "subtype6" "subtype2" "subtype6" "subtype4" "subtype1" "subtype5"
[889] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype4"
[895] "subtype4" "subtype1" "subtype5" "subtype1" "subtype6" "subtype3"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype4" "subtype5" "subtype1" "subtype4" "subtype4" "subtype1"
 [13] "subtype1" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
 [19] "subtype1" "subtype1" "subtype5" "subtype4" "subtype4" "subtype5"
 [25] "subtype6" "subtype7" "subtype1" "subtype6" "subtype2" "subtype3"
 [31] "subtype2" "subtype3" "subtype5" "subtype5" "subtype2" "subtype5"
 [37] "subtype4" "subtype1" "subtype2" "subtype1" "subtype4" "subtype1"
 [43] "subtype3" "subtype5" "subtype3" "subtype3" "subtype2" "subtype6"
 [49] "subtype7" "subtype5" "subtype2" "subtype5" "subtype5" "subtype3"
 [55] "subtype2" "subtype2" "subtype4" "subtype1" "subtype2" "subtype4"
 [61] "subtype4" "subtype1" "subtype6" "subtype1" "subtype4" "subtype1"
 [67] "subtype5" "subtype5" "subtype3" "subtype3" "subtype2" "subtype3"
 [73] "subtype3" "subtype1" "subtype3" "subtype4" "subtype5" "subtype3"
 [79] "subtype1" "subtype2" "subtype2" "subtype1" "subtype5" "subtype5"
 [85] "subtype5" "subtype5" "subtype3" "subtype2" "subtype1" "subtype5"
 [91] "subtype2" "subtype2" "subtype2" "subtype5" "subtype5" "subtype7"
 [97] "subtype5" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[103] "subtype1" "subtype4" "subtype1" "subtype1" "subtype1" "subtype4"
[109] "subtype1" "subtype5" "subtype1" "subtype2" "subtype5" "subtype3"
[115] "subtype5" "subtype5" "subtype1" "subtype2" "subtype3" "subtype3"
[121] "subtype5" "subtype1" "subtype3" "subtype1" "subtype1" "subtype5"
[127] "subtype3" "subtype2" "subtype2" "subtype4" "subtype1" "subtype3"
[133] "subtype1" "subtype5" "subtype3" "subtype1" "subtype5" "subtype1"
[139] "subtype3" "subtype5" "subtype6" "subtype2" "subtype6" "subtype5"
[145] "subtype6" "subtype1" "subtype1" "subtype5" "subtype4" "subtype1"
[151] "subtype5" "subtype3" "subtype4" "subtype4" "subtype3" "subtype4"
[157] "subtype5" "subtype3" "subtype5" "subtype4" "subtype4" "subtype5"
[163] "subtype4" "subtype1" "subtype4" "subtype3" "subtype3" "subtype4"
[169] "subtype6" "subtype5" "subtype1" "subtype5" "subtype1" "subtype3"
[175] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[181] "subtype4" "subtype3" "subtype5" "subtype5" "subtype5" "subtype4"
[187] "subtype4" "subtype2" "subtype4" "subtype1" "subtype3" "subtype3"
[193] "subtype1" "subtype3" "subtype5" "subtype4" "subtype3" "subtype3"
[199] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype5"
[205] "subtype4" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
[211] "subtype3" "subtype3" "subtype4" "subtype4" "subtype3" "subtype3"
[217] "subtype2" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[223] "subtype4" "subtype3" "subtype2" "subtype4" "subtype3" "subtype1"
[229] "subtype5" "subtype2" "subtype2" "subtype2" "subtype2" "subtype5"
[235] "subtype6" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[241] "subtype2" "subtype2" "subtype3" "subtype6" "subtype2" "subtype3"
[247] "subtype5" "subtype3" "subtype5" "subtype3" "subtype5" "subtype5"
[253] "subtype4" "subtype1" "subtype4" "subtype5" "subtype1" "subtype1"
[259] "subtype4" "subtype1" "subtype5" "subtype3" "subtype1" "subtype3"
[265] "subtype1" "subtype3" "subtype2" "subtype4" "subtype4" "subtype5"
[271] "subtype1" "subtype5" "subtype5" "subtype1" "subtype6" "subtype1"
[277] "subtype3" "subtype3" "subtype3" "subtype3" "subtype5" "subtype1"
[283] "subtype3" "subtype5" "subtype2" "subtype2" "subtype4" "subtype7"
[289] "subtype5" "subtype2" "subtype5" "subtype1" "subtype5" "subtype4"
[295] "subtype5" "subtype1" "subtype6" "subtype1" "subtype5" "subtype3"
[301] "subtype6" "subtype4" "subtype7" "subtype4" "subtype4" "subtype3"
[307] "subtype2" "subtype5" "subtype6" "subtype1" "subtype4" "subtype1"
[313] "subtype3" "subtype5" "subtype1" "subtype1" "subtype2" "subtype3"
[319] "subtype2" "subtype4" "subtype2" "subtype1" "subtype2" "subtype5"
[325] "subtype2" "subtype5" "subtype5" "subtype1" "subtype5" "subtype5"
[331] "subtype5" "subtype1" "subtype4" "subtype4" "subtype3" "subtype3"
[337] "subtype1" "subtype5" "subtype1" "subtype5" "subtype3" "subtype1"
[343] "subtype5" "subtype1" "subtype5" "subtype5" "subtype4" "subtype5"
[349] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype6"
[361] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype4"
[367] "subtype5" "subtype3" "subtype7" "subtype2" "subtype1" "subtype5"
[373] "subtype3" "subtype5" "subtype2" "subtype3" "subtype2" "subtype3"
[379] "subtype1" "subtype5" "subtype3" "subtype2" "subtype4" "subtype5"
[385] "subtype2" "subtype3" "subtype5" "subtype4" "subtype1" "subtype5"
[391] "subtype4" "subtype2" "subtype1" "subtype3" "subtype2" "subtype5"
[397] "subtype3" "subtype2" "subtype6" "subtype2" "subtype2" "subtype1"
[403] "subtype6" "subtype6" "subtype2" "subtype1" "subtype1" "subtype1"
[409] "subtype3" "subtype1" "subtype4" "subtype4" "subtype3" "subtype3"
[415] "subtype3" "subtype2" "subtype4" "subtype2" "subtype1" "subtype4"
[421] "subtype5" "subtype5" "subtype5" "subtype3" "subtype1" "subtype1"
[427] "subtype5" "subtype4" "subtype3" "subtype5" "subtype5" "subtype3"
[433] "subtype2" "subtype3" "subtype2" "subtype4" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype5" "subtype5" "subtype4" "subtype1"
[445] "subtype2" "subtype3" "subtype3" "subtype1" "subtype5" "subtype5"
[451] "subtype2" "subtype5" "subtype1" "subtype3" "subtype4" "subtype3"
[457] "subtype5" "subtype1" "subtype4" "subtype6" "subtype2" "subtype3"
[463] "subtype2" "subtype1" "subtype5" "subtype3" "subtype7" "subtype4"
[469] "subtype5" "subtype1" "subtype2" "subtype2" "subtype3" "subtype7"
[475] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype6"
[481] "subtype3" "subtype4" "subtype3" "subtype4" "subtype3" "subtype1"
[487] "subtype4" "subtype4" "subtype4" "subtype6" "subtype5" "subtype5"
[493] "subtype5" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[499] "subtype2" "subtype3" "subtype6" "subtype3" "subtype3" "subtype6"
[505] "subtype4" "subtype4" "subtype1" "subtype3" "subtype5" "subtype1"
[511] "subtype5" "subtype2" "subtype3" "subtype3" "subtype4" "subtype5"
[517] "subtype4" "subtype5" "subtype5" "subtype2" "subtype2" "subtype3"
[523] "subtype5" "subtype5" "subtype5" "subtype5" "subtype2" "subtype3"
[529] "subtype6" "subtype5" "subtype3" "subtype3" "subtype2" "subtype2"
[535] "subtype3" "subtype5" "subtype5" "subtype4" "subtype1" "subtype3"
[541] "subtype2" "subtype2" "subtype3" "subtype1" "subtype6" "subtype1"
[547] "subtype3" "subtype4" "subtype4" "subtype5" "subtype2" "subtype5"
[553] "subtype4" "subtype1" "subtype2" "subtype3" "subtype1" "subtype4"
[559] "subtype1" "subtype4" "subtype3" "subtype5" "subtype3" "subtype6"
[565] "subtype4" "subtype5" "subtype4" "subtype4" "subtype1" "subtype4"
[571] "subtype5" "subtype1" "subtype5" "subtype2" "subtype1" "subtype3"
[577] "subtype2" "subtype5" "subtype2" "subtype3" "subtype3" "subtype5"
[583] "subtype1" "subtype5" "subtype4" "subtype2" "subtype4" "subtype4"
[589] "subtype5" "subtype4" "subtype7" "subtype2" "subtype3" "subtype3"
[595] "subtype5" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
[601] "subtype2" "subtype1" "subtype4" "subtype4" "subtype7" "subtype5"
[607] "subtype3" "subtype3" "subtype4" "subtype4" "subtype5" "subtype5"
[613] "subtype4" "subtype4" "subtype4" "subtype5" "subtype1" "subtype4"
[619] "subtype5" "subtype5" "subtype4" "subtype5" "subtype3" "subtype1"
[625] "subtype1" "subtype2" "subtype3" "subtype1" "subtype4" "subtype4"
[631] "subtype4" "subtype2" "subtype5" "subtype3" "subtype3" "subtype4"
[637] "subtype4" "subtype2" "subtype5" "subtype4" "subtype4" "subtype1"
[643] "subtype1" "subtype4" "subtype3" "subtype3" "subtype5" "subtype6"
[649] "subtype5" "subtype3" "subtype3" "subtype2" "subtype5" "subtype5"
[655] "subtype2" "subtype3" "subtype5" "subtype5" "subtype5" "subtype4"
[661] "subtype1" "subtype7" "subtype3" "subtype3" "subtype1" "subtype3"
[667] "subtype3" "subtype4" "subtype3" "subtype3" "subtype1" "subtype3"
[673] "subtype5" "subtype5" "subtype3" "subtype7" "subtype5" "subtype3"
[679] "subtype1" "subtype6" "subtype1" "subtype2" "subtype3" "subtype2"
[685] "subtype1" "subtype4" "subtype2" "subtype5" "subtype3" "subtype2"
[691] "subtype5" "subtype2" "subtype3" "subtype2" "subtype5" "subtype5"
[697] "subtype3" "subtype6" "subtype5" "subtype5" "subtype3" "subtype4"
[703] "subtype3" "subtype3" "subtype1" "subtype3" "subtype4" "subtype2"
[709] "subtype1" "subtype5" "subtype5" "subtype2" "subtype4" "subtype5"
[715] "subtype1" "subtype1" "subtype7" "subtype1" "subtype4" "subtype3"
[721] "subtype3" "subtype5" "subtype3" "subtype1" "subtype1" "subtype5"
[727] "subtype2" "subtype3" "subtype2" "subtype5" "subtype3" "subtype2"
[733] "subtype3" "subtype3" "subtype3" "subtype3" "subtype6" "subtype5"
[739] "subtype2" "subtype5" "subtype5" "subtype5" "subtype1" "subtype4"
[745] "subtype2" "subtype3" "subtype6" "subtype1" "subtype6" "subtype3"
[751] "subtype5" "subtype2" "subtype5" "subtype5" "subtype1" "subtype2"
[757] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[763] "subtype5" "subtype3" "subtype3" "subtype5" "subtype4" "subtype4"
[769] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[775] "subtype4" "subtype3" "subtype3" "subtype5" "subtype3" "subtype1"
[781] "subtype3" "subtype6" "subtype5" "subtype3" "subtype5" "subtype4"
[787] "subtype5" "subtype5" "subtype3" "subtype3" "subtype3" "subtype5"
[793] "subtype4" "subtype4" "subtype2" "subtype4" "subtype3" "subtype3"
[799] "subtype1" "subtype1" "subtype1" "subtype5" "subtype5" "subtype4"
[805] "subtype3" "subtype3" "subtype5" "subtype5" "subtype6" "subtype3"
[811] "subtype6" "subtype1" "subtype3" "subtype6" "subtype1" "subtype5"
[817] "subtype2" "subtype3" "subtype3" "subtype5" "subtype2" "subtype3"
[823] "subtype3" "subtype5" "subtype7" "subtype1" "subtype5" "subtype5"
[829] "subtype5" "subtype5" "subtype3" "subtype1" "subtype3" "subtype3"
[835] "subtype1" "subtype1" "subtype5" "subtype1" "subtype4" "subtype5"
[841] "subtype3" "subtype2" "subtype2" "subtype1" "subtype4" "subtype5"
[847] "subtype2" "subtype5" "subtype6" "subtype1" "subtype5" "subtype2"
[853] "subtype5" "subtype1" "subtype3" "subtype6" "subtype4" "subtype5"
[859] "subtype4" "subtype1" "subtype4" "subtype2" "subtype5" "subtype6"
[865] "subtype3" "subtype3" "subtype5" "subtype5" "subtype3" "subtype2"
[871] "subtype1" "subtype3" "subtype6" "subtype2" "subtype3" "subtype4"
[877] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype4"
[883] "subtype6" "subtype2" "subtype6" "subtype4" "subtype1" "subtype5"
[889] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype4"
[895] "subtype4" "subtype1" "subtype5" "subtype1" "subtype6" "subtype3"
D7V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      12       12        0        0        82        36         0
  subtype2      14       14        2        5        28        37         1
  subtype3      20       24        2        1        75        38         0
  subtype4       9        7        1        1        47        34         0
  subtype5      14       11        6        0        74        59         1
  subtype6       5        3        0        2        12        10         0
  subtype7       3        1        0        0         6         3         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         16          2          6        3         0       2
  subtype2         19          1         13        2         1       2
  subtype3         24          6          7        3         0       6
  subtype4         27          5         11        5         0       5
  subtype5         37         11          8        1         0       2
  subtype6          6          0          6        1         0       0
  subtype7          1          0          1        0         0       0
D7V3, multiclass
          vv
clus        T1  T2  T3  T4
  subtype1  37 112  17   5
  subtype2  45  65  27   1
  subtype3  74 103  21   8
  subtype4  31  97  16   8
  subtype5  51 140  21  11
  subtype6   9  25  10   1
  subtype7   4  10   1   0
D7V4, multiclass
          vv
clus        N0  N1  N2  N3
  subtype1 107  45  13   7
  subtype2  56  53  13  15
  subtype3 107  67  18  11
  subtype4  55  52  26  14
  subtype5  92  86  32   9
  subtype6  23  13   3   6
  subtype7  10   3   1   1
D7V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 155   3  14
  subtype2        1 115   2  21
  subtype3        1 174   3  28
  subtype4        0 133   5  14
  subtype5        0 203   1  20
  subtype6        0  36   1   8
  subtype7        0  12   0   3
D7V6, multiclass
D7V7, binary
          cls
clus         0   1
  subtype1 172   0
  subtype2 139   0
  subtype3 204   2
  subtype4 151   1
  subtype5 217   7
  subtype6  45   0
  subtype7  15   0
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  172    0
  subtype2  139    0
  subtype3  204    2
  subtype4  151    1
  subtype5  217    7
  subtype6   45    0
  subtype7   15    0
          vv
clus       INFILTRATING CARCINOMA NOS INFILTRATING DUCTAL CARCINOMA
  subtype1                          1                           149
  subtype2                          0                            71
  subtype3                          0                           139
  subtype4                          0                           137
  subtype5                          0                           184
  subtype6                          0                            18
  subtype7                          0                            13
          vv
clus       INFILTRATING LOBULAR CARCINOMA MEDULLARY CARCINOMA
  subtype1                              1                   4
  subtype2                             53                   0
  subtype3                             44                   0
  subtype4                             10                   0
  subtype5                             18                   0
  subtype6                             25                   0
  subtype7                              1                   1
          vv
clus       MIXED HISTOLOGY (PLEASE SPECIFY) MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                                0                  2             14
  subtype2                               11                  1              3
  subtype3                                8                  3             12
  subtype4                                1                  0              4
  subtype5                                6                  8              8
  subtype6                                1                  0              1
  subtype7                                0                  0              0
D7V8, multiclass
D7V9, binary
          cls
clus         0   1
  subtype1  52 120
  subtype2  35 104
  subtype3  49 157
  subtype4  29 123
  subtype5  53 171
  subtype6   8  37
  subtype7   5  10
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   52  120
  subtype2   35  104
  subtype3   49  157
  subtype4   29  123
  subtype5   53  171
  subtype6    8   37
  subtype7    5   10
D7V10, continuous

Clustering(8) Variable = MRNASEQ_CHIERARCHICAL
D8V1, survival
          sevent
clus2        0   1
  subtype1 254  22
  subtype2 188  37
  subtype3 346  53
subtype1 subtype2 subtype3 
     276      225      399 
subtype1 subtype2 subtype3 
      22       37       53 
$subtype1
TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SJ TCGA-A2-A04Y TCGA-A2-A0CK 
       14.37        43.40        48.10        14.01        36.13       125.56 
TCGA-A2-A0CO TCGA-A2-A0CP TCGA-A2-A0CR TCGA-A2-A0CT TCGA-A2-A0CV TCGA-A2-A0CZ 
      112.04        92.48       107.93        75.22        63.42        53.10 
TCGA-A2-A0EM TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0EP TCGA-A2-A0ES TCGA-A2-A0EU 
      101.69        89.33        80.25       107.61        37.05        34.29 
TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0SU TCGA-A2-A0SY TCGA-A2-A0T3 TCGA-A2-A0T4 
       29.72        24.72        54.61        44.28        18.71        20.52 
TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YD TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL 
       18.90        20.75        25.28        14.50        19.30        14.63 
TCGA-A2-A1FW TCGA-A2-A1FZ TCGA-A2-A1G0 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A 
       17.36        22.45        20.25        16.47        52.44       107.70 
TCGA-A2-A25D TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A3XW TCGA-A2-A3XZ TCGA-A2-A4RW 
       18.15        20.88        39.62        49.48        31.96         7.30 
TCGA-A2-A4RY TCGA-A2-A4S2 TCGA-A7-A0CG TCGA-A7-A0CH TCGA-A7-A0D9 TCGA-A7-A0DB 
        8.81         6.74        34.29        35.47        37.45        33.07 
TCGA-A7-A13H TCGA-A7-A26E TCGA-A7-A3J1 TCGA-A7-A425 TCGA-A7-A426 TCGA-A7-A4SA 
       29.56        13.84        11.28        14.66        11.97         7.92 
TCGA-A7-A4SB TCGA-A7-A4SC TCGA-A8-A07E TCGA-A8-A07J TCGA-A8-A08O TCGA-A8-A09A 
        6.58         7.07        19.99        12.00        30.97         9.99 
TCGA-A8-A09D TCGA-A8-A09V TCGA-A8-A0A1 TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A6 
       13.02        15.02        12.00        19.00        13.02        21.04 
TCGA-A8-A0AB TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AC-A2FB TCGA-AC-A2FF TCGA-AC-A2FG 
       17.00        10.82         1.45         1.45        55.40        36.99 
TCGA-AC-A2FK TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A3BB TCGA-AC-A3HN TCGA-AC-A3OD 
       38.79        50.70         0.92         0.99         0.69         1.15 
TCGA-AC-A3QP TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AN-A049 TCGA-AN-A0FN TCGA-AN-A0FS 
        9.40         1.68         1.51         0.62         7.17         6.28 
TCGA-AN-A0FW TCGA-AN-A0XL TCGA-AN-A0XT TCGA-AN-A0XV TCGA-AO-A03L TCGA-AO-A03M 
        0.36         0.33         0.33         5.33        80.28        47.84 
TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03V TCGA-AO-A0J5 TCGA-AO-A0J9 TCGA-AO-A0JC 
       68.75        47.87        29.13        24.16        53.00        50.86 
TCGA-AO-A0JD TCGA-AO-A0JF TCGA-AO-A0JG TCGA-AO-A0JJ TCGA-AO-A12A TCGA-AO-A12E 
       72.00        21.37        26.24        62.04        90.54        57.27 
TCGA-AO-A12G TCGA-AO-A1KO TCGA-AR-A0TQ TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AM 
       41.59        14.73        49.32        51.22        48.82        62.56 
TCGA-AR-A1AN TCGA-AR-A1AU TCGA-AR-A1AX TCGA-AR-A24M TCGA-AR-A24O TCGA-AR-A24T 
       43.69        46.32        36.26        65.42        65.65        53.26 
TCGA-AR-A24W TCGA-AR-A252 TCGA-AR-A255 TCGA-AR-A2LE TCGA-AR-A2LM TCGA-AR-A2LN 
       50.96        40.64        34.78       128.65        40.01        17.06 
TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-AR-A5QM TCGA-AR-A5QN TCGA-AR-A5QP TCGA-B6-A0IE 
       20.81        16.96        54.71        16.01        20.45        65.69 
TCGA-B6-A0IG TCGA-B6-A0IH TCGA-B6-A0IN TCGA-B6-A0IP TCGA-B6-A0RG TCGA-B6-A0RN 
      146.50       112.37        84.59       110.93        68.45       172.96 
TCGA-B6-A0RQ TCGA-B6-A0RV TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-B6-A1KI TCGA-B6-A1KN 
      140.48       157.41       113.75        58.88        73.51       139.17 
TCGA-B6-A2IU TCGA-BH-A0AY TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B4 
      170.17        25.55        28.50        46.92        37.74        39.16 
TCGA-BH-A0B8 TCGA-BH-A0BA TCGA-BH-A0BC TCGA-BH-A0BD TCGA-BH-A0BJ TCGA-BH-A0BM 
       51.58        37.22        32.02        18.21        21.70        36.72 
TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BZ TCGA-BH-A0C0 
       35.67        48.69        27.16        53.92        49.05        41.75 
TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DH TCGA-BH-A0DI TCGA-BH-A0DK 
       48.13        31.17        23.44        38.01        22.13        13.91 
TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DQ TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX 
       17.26        15.65         3.22        38.47        45.17        47.41 
TCGA-BH-A0E2 TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H3 
       14.30        46.19        32.65        30.35        10.78        37.78 
TCGA-BH-A0H5 TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HK TCGA-BH-A0HP TCGA-BH-A0HQ 
       35.51        26.50        23.90         5.85        13.61        36.85 
TCGA-BH-A0HX TCGA-BH-A0W4 TCGA-BH-A18F TCGA-BH-A18K TCGA-BH-A18M TCGA-BH-A18R 
       27.25         5.75         8.81        90.81        72.56        37.51 
TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A1FL 
       82.85        42.28       120.62        74.73        36.92        55.00 
TCGA-BH-A201 TCGA-BH-A28O TCGA-BH-A42U TCGA-BH-A42V TCGA-C8-A1HI TCGA-C8-A26W 
        6.87        10.62       109.25         8.91         0.07         0.23 
TCGA-C8-A3M7 TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1JB TCGA-D8-A1JH TCGA-D8-A1JU 
        0.03        13.48        21.14        18.71        14.01        14.70 
TCGA-D8-A1X8 TCGA-D8-A1XM TCGA-D8-A1Y0 TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27P 
        8.94        17.69         5.46        14.43         9.44         0.76 
TCGA-D8-A27T TCGA-D8-A27V TCGA-D8-A3Z5 TCGA-D8-A3Z6 TCGA-D8-A4Z1 TCGA-E2-A108 
       13.05        12.53        14.50         6.05         7.33        27.52 
TCGA-E2-A10F TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A14Z TCGA-E2-A15E TCGA-E2-A15H 
       28.87        38.24        43.33        17.03        20.68        12.92 
TCGA-E2-A15I TCGA-E2-A15K TCGA-E2-A15M TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1B5 
       17.39         9.01         7.69        19.56        53.03        32.32 
TCGA-E2-A1BC TCGA-E2-A1IF TCGA-E2-A1IJ TCGA-E2-A1IL TCGA-E2-A1IO TCGA-E2-A1IU 
       16.47        37.41        28.41         3.85        20.94        11.08 
TCGA-E2-A1L6 TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E9-A1R0 TCGA-E9-A227 TCGA-E9-A295 
       54.18         5.49        15.72        14.27         0.79         0.69 
TCGA-E9-A2JT TCGA-E9-A3X8 TCGA-E9-A5FK TCGA-EW-A1IW TCGA-EW-A1IX TCGA-EW-A1J2 
        0.76        15.72         0.39        12.20        39.72        13.25 
TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1P3 TCGA-EW-A1PD TCGA-EW-A1PF TCGA-EW-A1PG 
       16.57        15.68        52.96        13.94        14.43        34.52 
TCGA-EW-A2FS TCGA-EW-A2FV TCGA-EW-A3E8 TCGA-EW-A424 TCGA-GM-A2D9 TCGA-GM-A2DA 
       46.75        14.04        21.27        10.59        59.57       194.27 
TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A3NY TCGA-GM-A3XG TCGA-GM-A3XN 
       61.91        62.33        90.81        38.20        32.25        53.92 
TCGA-GM-A4E0 TCGA-GM-A5PV TCGA-GM-A5PX TCGA-LL-A440 TCGA-MS-A51U TCGA-OK-A5Q2 
       57.63        13.55        18.12         0.66         2.79         2.10 
TCGA-OL-A5DA TCGA-OL-A5RU TCGA-OL-A5RV TCGA-OL-A5RX TCGA-OL-A66J TCGA-OL-A66K 
       44.58        27.65        24.10        16.87        54.51        33.90 

$subtype2
TCGA-A1-A0SB TCGA-A1-A0SI TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P 
        8.52        20.84        31.79        28.01        19.17        17.98 
TCGA-A2-A04Q TCGA-A2-A04T TCGA-A2-A04U TCGA-A2-A04W TCGA-A2-A0CM TCGA-A2-A0CX 
       41.92        73.84        22.03        64.04        24.79        56.81 
TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 
       21.14        34.55        33.76        99.19        50.43        17.52 
TCGA-A2-A0T1 TCGA-A2-A0T2 TCGA-A2-A0YE TCGA-A2-A0YJ TCGA-A2-A0YM TCGA-A2-A1G1 
       17.10         7.96        18.18        18.58        31.69        19.17 
TCGA-A2-A25F TCGA-A2-A3XS TCGA-A2-A3XT TCGA-A2-A3XU TCGA-A2-A3XV TCGA-A2-A3XX 
       10.59        33.93        83.01        29.98        14.07        38.40 
TCGA-A2-A3XY TCGA-A2-A3Y0 TCGA-A2-A4RX TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D 
       34.98        38.33         9.01        35.31        12.26         8.78 
TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I TCGA-A7-A4SD TCGA-A7-A4SE 
       10.72        15.09        10.95        12.13         5.52        12.20 
TCGA-A7-A5ZV TCGA-A8-A07C TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A08L 
        6.90        19.07         9.99         8.98         9.96         9.99 
TCGA-A8-A08R TCGA-A8-A08X TCGA-A8-A09X TCGA-A8-A0A7 TCGA-AC-A23H TCGA-AC-A2BK 
        0.99        33.99        14.01         0.99         2.66        38.53 
TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AT 
        1.02         2.27         1.78         1.71         6.48         0.33 
TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FV TCGA-AN-A0FX TCGA-AN-A0G0 TCGA-AN-A0XU 
        7.92         7.56         0.33         0.33         0.53         0.33 
TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J4 TCGA-AO-A0J6 TCGA-AO-A0JE TCGA-AO-A0JL 
       59.05        32.78        17.65        37.48        76.73        55.33 
TCGA-AO-A124 TCGA-AO-A128 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F TCGA-AO-A1KR 
      102.54        94.59        96.10        64.04        48.36        70.36 
TCGA-AQ-A04J TCGA-AQ-A04L TCGA-AQ-A0Y5 TCGA-AQ-A54N TCGA-AR-A0TP TCGA-AR-A0TS 
       26.93       130.09         5.62         2.53        82.88        37.41 
TCGA-AR-A0TU TCGA-AR-A0TX TCGA-AR-A0U0 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI 
       11.84         0.49         0.26        53.49        75.55        61.84 
TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AT TCGA-AR-A1AY 
       52.73        43.53        43.04        17.19        41.82        20.19 
TCGA-AR-A24Q TCGA-AR-A24U TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 TCGA-AR-A2LH 
       66.02        53.36        45.14        39.85        93.83        20.22 
TCGA-AR-A2LR TCGA-AR-A5QQ TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0IJ 
       20.38        10.59        77.62       143.34        32.78       176.98 
TCGA-B6-A0IK TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU 
       18.77       140.84       211.53       100.67        89.46       131.21 
TCGA-B6-A0WX TCGA-B6-A0X1 TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0AW TCGA-BH-A0B3 
       21.47       186.44       101.52        38.79        20.45        39.55 
TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BR TCGA-BH-A0BW 
       56.98        51.68        24.85        44.02        53.65        11.67 
TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A0RX TCGA-BH-A0WA 
       48.23         4.37         9.60        31.00         5.59        23.05 
TCGA-BH-A18G TCGA-BH-A18Q TCGA-BH-A18T TCGA-BH-A18V TCGA-BH-A1EN TCGA-BH-A1EX 
        2.01        55.63         7.36        51.12        69.93        49.58 
TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FU TCGA-BH-A202 TCGA-BH-A203 
       25.81        97.48       114.12        72.07         0.72        38.60 
TCGA-BH-A208 TCGA-C8-A12Q TCGA-C8-A137 TCGA-C8-A1HJ TCGA-C8-A1HK TCGA-C8-A26X 
       57.83        12.99         0.85         0.16         0.23         0.36 
TCGA-C8-A26Y TCGA-C8-A275 TCGA-C8-A278 TCGA-C8-A27B TCGA-D8-A13Y TCGA-D8-A13Z 
        0.43         0.03         0.03         0.99        11.90        20.88 
TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JF 
       13.97        14.17        19.20        17.49        16.50        12.03 
TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1JM TCGA-D8-A1XK TCGA-D8-A1XQ 
       12.03        20.12        20.09        19.40        10.72        16.41 
TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-E2-A14N 
        6.35        12.66         7.46         4.60         4.73        47.15 
TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A150 TCGA-E2-A152 
       40.96        38.60        31.92        28.60        25.41        27.12 
TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B6 TCGA-E2-A1II 
       14.79        25.05        60.53        53.62        28.47        33.70 
TCGA-E2-A1LB TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK 
       40.47        28.90        18.87       106.72       102.61         8.75 
TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E2-A573 TCGA-E9-A1RH TCGA-E9-A22G TCGA-E9-A243 
       43.04        15.45        22.26        20.55        10.19        17.06 
TCGA-E9-A244 TCGA-E9-A248 TCGA-E9-A3QA TCGA-E9-A5FL TCGA-EW-A1OW TCGA-EW-A1P4 
        0.66         1.91         0.62         0.26        22.82        29.82 
TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A3U0 
       30.08         7.86        19.99        19.92        55.00        17.49 
TCGA-GI-A2C9 TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A3XL 
      110.07        53.10        43.04        42.71        42.28        69.30 
TCGA-JL-A3YW TCGA-LL-A441 TCGA-OL-A5D6 TCGA-OL-A5D7 TCGA-OL-A5RW TCGA-OL-A5RY 
       11.84         2.99        12.66        46.55        26.20        14.10 
TCGA-OL-A5RZ TCGA-OL-A5S0 TCGA-OL-A66I 
       10.29         9.80        23.70 

$subtype3
TCGA-A1-A0SG TCGA-A1-A0SH TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ TCGA-A2-A04N 
       14.24        47.24         7.96        39.32        18.18       104.81 
TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04X TCGA-A2-A0CL TCGA-A2-A0CQ TCGA-A2-A0CS 
       82.16        63.12        55.43        64.54        88.57        75.55 
TCGA-A2-A0CU TCGA-A2-A0CW TCGA-A2-A0CY TCGA-A2-A0D3 TCGA-A2-A0D4 TCGA-A2-A0EQ 
        5.16        64.01        55.00        28.77        25.22        79.76 
TCGA-A2-A0ER TCGA-A2-A0ET TCGA-A2-A0EV TCGA-A2-A0EY TCGA-A2-A0SV TCGA-A2-A0SW 
       74.37        35.05        31.82        24.16        27.12        44.84 
TCGA-A2-A0T5 TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT 
       17.46        32.52        15.42        21.86        21.63        23.77 
TCGA-A2-A1FV TCGA-A2-A1FX TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E 
       23.47        36.79        19.56        16.31        17.19        91.92 
TCGA-A2-A4S0 TCGA-A2-A4S3 TCGA-A7-A0CD TCGA-A7-A0CJ TCGA-A7-A13F TCGA-A7-A13G 
        8.91         3.42        38.30        30.58        12.72        11.44 
TCGA-A7-A26H TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3IY TCGA-A7-A3IZ TCGA-A7-A3J0 
       13.12        12.13        12.82         4.96        10.59         2.50 
TCGA-A7-A3RF TCGA-A7-A4SF TCGA-A7-A56D TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q 
       13.41        12.13         5.82        13.02        13.02         1.02 
TCGA-A8-A06R TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06X TCGA-A8-A06Y TCGA-A8-A06Z 
       17.95        41.06        29.00        31.00        26.01         1.02 
TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07F TCGA-A8-A07G 
       17.00        53.95         9.01        33.01        18.94        18.94 
TCGA-A8-A07I TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07W TCGA-A8-A082 
       14.01        17.00        10.98         7.96         9.99        18.05 
TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08B TCGA-A8-A08C TCGA-A8-A08F 
       15.06        36.95        13.02        23.08        19.96        18.05 
TCGA-A8-A08G TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08P TCGA-A8-A08S TCGA-A8-A08T 
       19.92        12.00        37.05        30.97        19.07        93.04 
TCGA-A8-A08Z TCGA-A8-A091 TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A095 TCGA-A8-A097 
       40.01        19.07        16.01        17.92        41.95        12.00 
TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M 
        9.99        12.00         1.02        33.07        29.95        15.02 
TCGA-A8-A09N TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A09T TCGA-A8-A09W TCGA-A8-A0A9 
        1.02        25.02         8.98        19.00         0.99        13.02 
TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A2BM TCGA-AC-A2FM TCGA-AC-A3TN 
       38.04         0.95         2.37        38.20        26.04         1.12 
TCGA-AC-A3YJ TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A046 TCGA-AN-A04A 
        1.28         0.33         0.33         0.23         0.33         2.93 
TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FF 
        7.99         7.33         0.16         0.30         6.41         4.60 
TCGA-AN-A0FK TCGA-AN-A0FT TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0XN TCGA-AN-A0XO 
        6.97         6.02         0.33         0.33         0.33        12.33 
TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AN-A0XW TCGA-AO-A03N TCGA-AO-A03O 
        0.30         0.33         0.33         5.59        54.08        81.63 
TCGA-AO-A03P TCGA-AO-A0J3 TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0JA TCGA-AO-A0JI 
       84.69        21.40        20.28        22.36        21.53        38.53 
TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12H 
       71.80        99.22        93.70        77.56        65.52        28.34 
TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A1H2 
       82.62        61.87         0.53        17.79        24.79        15.62 
TCGA-AQ-A1H3 TCGA-AQ-A54O TCGA-AR-A0TR TCGA-AR-A0TT TCGA-AR-A0TV TCGA-AR-A0TW 
       13.22        21.86         5.26        55.20        29.72        24.30 
TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AP TCGA-AR-A1AS 
       55.86        43.17        83.87        74.40        39.95        40.83 
TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A24H TCGA-AR-A24K TCGA-AR-A24L TCGA-AR-A24N 
       42.58        35.24       109.58        50.89        73.02        68.19 
TCGA-AR-A24P TCGA-AR-A24R TCGA-AR-A24S TCGA-AR-A24V TCGA-AR-A24X TCGA-AR-A24Z 
        0.85        57.37        62.07        54.18        48.16        51.75 
TCGA-AR-A250 TCGA-AR-A2LK TCGA-AR-A2LL TCGA-B6-A0I5 TCGA-B6-A0I8 TCGA-B6-A0I9 
       56.12        42.84         7.33       149.56        24.62        12.13 
TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IM TCGA-B6-A0IO TCGA-B6-A0RH 
      220.87       129.57        50.70       126.12       110.14       188.98 
TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0WS 
      234.25        81.17        78.02       162.02       102.77        97.48 
TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 
      188.68        79.63        17.95       129.57       129.70        28.24 
TCGA-B6-A0X5 TCGA-B6-A1KC TCGA-BH-A0AU TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0BF 
       68.94        43.59        24.53        48.36        56.94        25.68 
TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0C1 TCGA-BH-A0C7 TCGA-BH-A0DD TCGA-BH-A0DS 
       45.57        49.94        43.99        42.90        45.80         2.53 
TCGA-BH-A0DZ TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0EB TCGA-BH-A0EI TCGA-BH-A0H0 
       16.27        15.68        44.78        24.49        24.43        15.16 
TCGA-BH-A0H6 TCGA-BH-A0H7 TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HI TCGA-BH-A0HL 
       24.56        23.05        41.00        52.96        20.35         2.37 
TCGA-BH-A0HN TCGA-BH-A0HO TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HY TCGA-BH-A0W3 
       16.96         2.50        12.89        51.29        50.76        23.93 
TCGA-BH-A0W5 TCGA-BH-A0W7 TCGA-BH-A18I TCGA-BH-A18J TCGA-BH-A18L TCGA-BH-A18N 
       42.35        44.81         7.23        20.09        26.66        37.74 
TCGA-BH-A18P TCGA-BH-A18S TCGA-BH-A18U TCGA-BH-A1EO TCGA-BH-A1ES TCGA-BH-A1EV 
       30.28        66.05        51.39        91.99       113.82        12.00 
TCGA-BH-A1EW TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FD 
       55.69        17.69        31.53        89.16        24.66        33.14 
TCGA-BH-A1FG TCGA-BH-A1FJ TCGA-BH-A1FM TCGA-BH-A1FN TCGA-BH-A1FR TCGA-BH-A204 
      122.89        63.35        45.63        72.07       144.59        83.31 
TCGA-BH-A209 TCGA-BH-A28Q TCGA-BH-A2L8 TCGA-BH-A42T TCGA-C8-A138 TCGA-C8-A1HL 
      130.16         6.44        20.12         0.99         0.23         0.07 
TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A26V TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A274 
        0.20         0.07         0.30         0.13         0.20         0.03 
TCGA-C8-A27A TCGA-C8-A3M8 TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A1J8 TCGA-D8-A1JC 
       12.20         0.23        13.25        20.58        14.17        15.78 
TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JP 
       18.15        18.90        18.97        20.09        20.38        21.01 
TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1X5 TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X9 
       12.20        13.32         5.62         7.76         2.79        12.49 
TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XG 
        9.01         6.61         2.66         5.10         6.48         6.44 
TCGA-D8-A1XJ TCGA-D8-A1XL TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XU 
       11.57        10.49         7.96        15.85        16.31        12.99 
TCGA-D8-A1XV TCGA-D8-A1XY TCGA-D8-A1XZ TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A1Y3 
       15.12         2.66         3.95         3.78         2.37         4.08 
TCGA-D8-A27E TCGA-D8-A27G TCGA-D8-A27L TCGA-D8-A27N TCGA-D8-A27R TCGA-D8-A27W 
       17.42        13.45         4.11         4.77         2.96         0.49 
TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A107 TCGA-E2-A109 TCGA-E2-A10A TCGA-E2-A10B 
       43.00        59.41        34.39        46.59        40.41        37.51 
TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V 
       40.08        28.44        44.65        33.17        33.30        34.22 
TCGA-E2-A14W TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 TCGA-E2-A15A 
       31.99        23.24        19.43        21.04        23.87        23.34 
TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15J TCGA-E2-A15L 
       22.78        17.26        21.60        18.18        19.36        20.58 
TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BD 
       12.99        17.06        14.07        14.99        29.95        17.10 
TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IH TCGA-E2-A1IK TCGA-E2-A1IN TCGA-E2-A1L7 
       38.30        32.78        33.73        22.62        22.19        27.42 
TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A2P5 TCGA-E2-A56Z TCGA-E2-A570 
       39.62        19.63        24.59        16.90         7.20        18.05 
TCGA-E9-A1NI TCGA-E9-A1R2 TCGA-E9-A1R3 TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 
       10.09         0.62         2.10         6.08         1.38         2.76 
TCGA-E9-A1R7 TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD TCGA-E9-A1RE TCGA-E9-A1RF 
       21.17        20.78        40.37         0.66        21.63         6.54 
TCGA-E9-A1RI TCGA-E9-A226 TCGA-E9-A229 TCGA-E9-A245 TCGA-E9-A247 TCGA-E9-A249 
       13.94        20.61        13.28         0.82         0.39         0.92 
TCGA-E9-A24A TCGA-E9-A2JS TCGA-E9-A3HO TCGA-E9-A3Q9 TCGA-E9-A5UO TCGA-EW-A1IY 
        0.33        17.75        13.08        18.41         0.23         8.48 
TCGA-EW-A1J1 TCGA-EW-A1J6 TCGA-EW-A1OV TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ 
       18.90        28.77        25.94        29.95        29.85        40.41 
TCGA-EW-A1P0 TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PA TCGA-EW-A1PC TCGA-EW-A1PE 
       41.10        23.11        18.48        18.90         6.12        10.52 
TCGA-EW-A2FW TCGA-EW-A423 TCGA-GI-A2C8 TCGA-GM-A2DC TCGA-GM-A2DM TCGA-GM-A2DN 
       22.09        10.16         6.97        53.52        76.64        77.33 
TCGA-GM-A2DO TCGA-GM-A3NW TCGA-JL-A3YX TCGA-LL-A442 TCGA-LL-A50Y TCGA-LL-A5YL 
       53.33       110.50        11.57         3.58         6.90         5.52 
TCGA-LQ-A4E4 TCGA-OL-A5D8 TCGA-OL-A66H 
       15.91         7.53        14.73 

subtype1 subtype2 subtype3 
    0.03     0.03     0.03 
subtype1 subtype2 subtype3 
  194.27   211.53   234.25 
subtype1 subtype2 subtype3 
  27.205   21.140   20.280 
[1] "0.0 - 194.3 (27.2)" "0.0 - 211.5 (21.1)" "0.0 - 234.2 (20.3)"
  [1] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
  [7] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [13] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [19] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [25] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [37] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [49] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [55] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [67] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [73] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
 [79] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [85] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [91] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [97] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[115] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[133] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[169] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[175] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[181] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[187] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[193] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[199] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[205] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[223] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[235] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[241] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[247] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[253] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[259] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[271] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[277] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[283] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[289] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[295] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[301] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[307] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[313] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[319] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[325] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[331] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[337] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[343] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[367] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[373] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[379] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[385] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[391] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[397] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[409] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[415] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[421] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[427] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[433] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[439] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[445] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[451] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[457] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[463] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[469] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[475] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[481] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[487] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[493] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[499] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[505] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[511] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[517] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[523] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[529] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[535] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[541] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[547] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[553] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[559] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[565] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[571] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[577] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[583] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[589] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[595] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[601] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[607] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[613] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[619] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[625] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[631] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[637] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[643] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[649] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[655] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[661] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[667] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[673] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[679] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[685] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[691] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[697] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[703] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[709] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[715] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[721] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[727] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[733] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[739] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[745] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[751] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[757] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[763] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[769] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[775] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[781] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[787] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[793] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[799] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[805] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[811] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[817] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[823] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[829] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[835] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[841] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[847] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[853] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[859] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[865] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[871] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[877] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[883] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[889] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[895] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
  [1] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
  [7] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [13] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [19] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [25] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [37] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [49] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [55] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [67] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [73] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
 [79] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [85] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [91] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [97] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[115] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[133] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[169] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[175] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[181] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[187] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[193] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[199] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[205] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[223] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[235] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[241] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[247] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[253] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[259] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[271] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[277] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[283] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[289] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[295] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[301] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[307] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[313] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[319] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[325] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[331] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[337] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[343] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[367] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[373] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[379] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[385] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[391] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[397] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[409] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[415] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[421] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[427] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[433] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[439] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[445] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[451] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[457] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[463] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[469] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[475] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[481] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[487] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[493] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[499] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[505] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[511] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[517] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[523] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[529] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[535] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[541] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[547] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[553] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[559] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[565] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[571] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[577] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[583] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[589] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[595] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[601] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[607] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[613] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[619] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[625] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[631] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[637] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[643] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[649] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[655] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[661] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[667] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[673] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[679] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[685] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[691] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[697] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[703] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[709] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[715] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[721] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[727] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[733] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[739] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[745] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[751] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[757] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[763] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[769] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[775] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[781] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[787] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[793] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[799] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[805] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[811] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[817] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[823] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[829] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[835] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[841] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[847] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[853] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[859] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[865] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[871] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[877] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[883] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[889] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[895] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
  [1] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
  [7] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [13] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [19] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [25] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [31] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [37] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [49] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [55] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [67] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [73] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
 [79] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [85] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [91] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [97] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[115] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[133] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[169] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[175] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[181] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[187] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[193] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[199] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[205] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[223] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[235] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[241] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[247] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[253] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[259] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[271] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[277] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[283] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[289] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[295] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[301] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[307] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[313] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[319] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[325] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[331] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[337] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[343] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[349] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[367] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[373] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[379] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[385] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[391] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[397] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[409] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[415] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[421] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[427] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[433] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[439] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[445] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[451] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[457] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[463] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[469] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[475] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[481] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[487] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[493] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[499] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[505] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[511] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
[517] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[523] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[529] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[535] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[541] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[547] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[553] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[559] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[565] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[571] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[577] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[583] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
[589] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[595] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[601] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[607] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[613] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[619] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[625] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[631] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[637] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[643] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[649] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[655] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[661] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[667] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[673] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[679] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[685] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[691] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[697] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[703] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[709] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[715] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[721] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[727] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[733] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[739] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[745] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[751] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[757] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[763] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[769] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[775] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[781] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[787] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[793] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[799] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[805] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[811] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[817] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[823] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[829] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[835] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[841] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[847] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[853] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[859] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[865] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[871] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[877] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[883] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[889] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[895] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
D8V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      31       28        4        7        70        66         0
  subtype2      15       18        1        1       107        50         1
  subtype3      31       26        6        1       147       101         1
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         42          2         23        3         1       4
  subtype2         24          3         12        3         0       4
  subtype3         64         20         17        9         0       9
D8V3, multiclass
          vv
clus        T1  T2  T3  T4
  subtype1  90 135  51   4
  subtype2  57 153  22   7
  subtype3 104 264  40  23
D8V4, multiclass
          vv
clus        N0  N1  N2  N3
  subtype1 128  99  26  25
  subtype2 134  67  22  14
  subtype3 188 153  58  24
D8V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 236   3  41
  subtype2        0 217   3  20
  subtype3        1 375   9  47
D8V6, multiclass
D8V7, binary
          cls
clus         0   1
  subtype1 279   2
  subtype2 240   0
  subtype3 424   8
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  279    2
  subtype2  240    0
  subtype3  424    8
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      279      240      424
  MALE          2        0        8
          vv
clus       INFILTRATING CARCINOMA NOS INFILTRATING DUCTAL CARCINOMA
  subtype1                          0                           153
  subtype2                          1                           211
  subtype3                          0                           347
          vv
clus       INFILTRATING LOBULAR CARCINOMA MEDULLARY CARCINOMA
  subtype1                            110                   0
  subtype2                              6                   4
  subtype3                             36                   1
          vv
clus       MIXED HISTOLOGY (PLEASE SPECIFY) MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                               11                  1              6
  subtype2                                1                  0             16
  subtype3                               15                 13             20
D8V8, multiclass
D8V9, binary
          cls
clus         0   1
  subtype1  67 214
  subtype2  65 175
  subtype3  99 333
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   67  214
  subtype2   65  175
  subtype3   99  333
     clus
vv    subtype1 subtype2 subtype3
  NO        67       65       99
  YES      214      175      333
D8V10, continuous

Clustering(9) Variable = MIRSEQ_CNMF
D9V1, survival
          sevent
clus2        0   1
  subtype1 229  21
  subtype2 338  50
  subtype3 217  38
subtype1 subtype2 subtype3 
     250      388      255 
subtype1 subtype2 subtype3 
      21       50       38 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A2-A04N TCGA-A2-A0CK 
        8.52        14.37        43.40        48.10       104.81       125.56 
TCGA-A2-A0CO TCGA-A2-A0CP TCGA-A2-A0CR TCGA-A2-A0CT TCGA-A2-A0CU TCGA-A2-A0CV 
      112.04        92.48       107.93        75.22         5.16        63.42 
TCGA-A2-A0CZ TCGA-A2-A0EM TCGA-A2-A0EN TCGA-A2-A0EO TCGA-A2-A0EP TCGA-A2-A0ER 
       53.10       101.69        89.33        80.25       107.61        74.37 
TCGA-A2-A0ES TCGA-A2-A0EV TCGA-A2-A0EW TCGA-A2-A0EX TCGA-A2-A0EY TCGA-A2-A0SU 
       37.05        31.82        29.72        24.72        24.16        54.61 
TCGA-A2-A0SY TCGA-A2-A0T4 TCGA-A2-A0T6 TCGA-A2-A0T7 TCGA-A2-A0YC TCGA-A2-A0YD 
       44.28        20.52        18.90        20.75        32.52        25.28 
TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FX TCGA-A2-A1G0 TCGA-A2-A1G6 TCGA-A2-A259 
       19.30        14.63        36.79        20.25        16.47        52.44 
TCGA-A2-A25A TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A3XW TCGA-A2-A4RW TCGA-A2-A4RY 
      107.70        20.88        39.62        49.48         7.30         8.81 
TCGA-A2-A4S2 TCGA-A7-A0CG TCGA-A7-A13H TCGA-A7-A26E TCGA-A7-A26H TCGA-A7-A3IY 
        6.74        34.29        29.56        13.84        13.12         4.96 
TCGA-A7-A3J1 TCGA-A7-A425 TCGA-A7-A426 TCGA-A7-A4SA TCGA-A7-A4SB TCGA-A7-A4SC 
       11.28        14.66        11.97         7.92         6.58         7.07 
TCGA-A8-A07E TCGA-A8-A095 TCGA-A8-A09A TCGA-A8-A09D TCGA-A8-A0A2 TCGA-A8-A0A6 
       19.99        41.95         9.99        13.02        19.00        21.04 
TCGA-A8-A0AB TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF 
       17.00        10.82         1.45        38.20         1.45        55.40 
TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A3BB 
       36.99        38.79        26.04        50.70         0.92         0.99 
TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3TN TCGA-AC-A3W6 TCGA-AC-A3YI 
        0.69         1.15         9.40         1.12         1.68         1.51 
TCGA-AN-A0FF TCGA-AN-A0FS TCGA-AN-A0XT TCGA-AN-A0XV TCGA-AO-A0J9 TCGA-AO-A0JF 
        4.60         6.28         0.33         5.33        53.00        21.37 
TCGA-AO-A0JG TCGA-AO-A0JI TCGA-AO-A128 TCGA-AO-A12A TCGA-AO-A12E TCGA-AO-A1KO 
       26.24        38.53        94.59        90.54        57.27        14.73 
TCGA-AQ-A1H3 TCGA-AQ-A54O TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AM 
       13.22        21.86         5.26        51.22        48.82        62.56 
TCGA-AR-A1AU TCGA-AR-A1AX TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24T TCGA-AR-A24W 
       46.32        36.26        65.65         0.85        53.26        50.96 
TCGA-AR-A2LE TCGA-AR-A2LH TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO TCGA-AR-A2LQ 
      128.65        20.22        40.01        17.06        20.81        16.96 
TCGA-AR-A5QM TCGA-AR-A5QN TCGA-AR-A5QP TCGA-B6-A0IH TCGA-B6-A0IK TCGA-B6-A0RM 
       54.71        16.01        20.45       112.37        18.77        78.02 
TCGA-B6-A0RQ TCGA-B6-A1KI TCGA-B6-A2IU TCGA-BH-A0AZ TCGA-BH-A0B5 TCGA-BH-A0B6 
      140.48        73.51       170.17        28.50        48.36        56.94 
TCGA-BH-A0BA TCGA-BH-A0BD TCGA-BH-A0BO TCGA-BH-A0BQ TCGA-BH-A0BZ TCGA-BH-A0C1 
       37.22        18.21        35.67        27.16        49.05        43.99 
TCGA-BH-A0C3 TCGA-BH-A0DE TCGA-BH-A0DI TCGA-BH-A0DO TCGA-BH-A0DT TCGA-BH-A0DV 
       48.13        31.17        22.13        17.26        38.47        45.17 
TCGA-BH-A0E2 TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0H3 TCGA-BH-A0HP TCGA-BH-A0W4 
       14.30        46.19        32.65        37.78        13.61         5.75 
TCGA-BH-A0W5 TCGA-BH-A18F TCGA-BH-A18M TCGA-BH-A1EO TCGA-BH-A1EU TCGA-BH-A1EW 
       42.35         8.81        72.56        91.99        42.28        55.69 
TCGA-BH-A1EX TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A1FU TCGA-BH-A201 
       49.58       120.62        74.73        36.92        72.07         6.87 
TCGA-BH-A28O TCGA-BH-A28Q TCGA-BH-A2L8 TCGA-BH-A42U TCGA-BH-A42V TCGA-C8-A137 
       10.62         6.44        20.12       109.25         8.91         0.85 
TCGA-C8-A26W TCGA-C8-A26X TCGA-C8-A26Z TCGA-C8-A3M7 TCGA-C8-A3M8 TCGA-D8-A145 
        0.23         0.36         0.13         0.03         0.23        13.48 
TCGA-D8-A1JB TCGA-D8-A1JH TCGA-D8-A1JU TCGA-D8-A1X8 TCGA-D8-A1XB TCGA-D8-A1XM 
       18.71        14.01        14.70         8.94         6.61        17.69 
TCGA-D8-A1Y2 TCGA-D8-A27E TCGA-D8-A27G TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L 
        2.37        17.42        13.45        14.43         9.44         4.11 
TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27T TCGA-D8-A27W TCGA-D8-A3Z5 TCGA-D8-A4Z1 
        4.77         0.76        13.05         0.49        14.50         7.33 
TCGA-E2-A107 TCGA-E2-A108 TCGA-E2-A10F TCGA-E2-A14Q TCGA-E2-A14U TCGA-E2-A15D 
       34.39        27.52        28.87        38.24        43.33        17.26 
TCGA-E2-A15E TCGA-E2-A15F TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1BC TCGA-E2-A1BD 
       20.68        21.60        19.56        53.03        16.47        17.10 
TCGA-E2-A1IF TCGA-E2-A1IH TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1L6 TCGA-E2-A2P5 
       37.41        33.73        28.41        22.62        54.18        16.90 
TCGA-E2-A3DX TCGA-E2-A56Z TCGA-E2-A570 TCGA-E9-A1R0 TCGA-E9-A1RD TCGA-E9-A226 
       15.72         7.20        18.05        14.27         0.66        20.61 
TCGA-E9-A245 TCGA-E9-A295 TCGA-E9-A2JT TCGA-E9-A3Q9 TCGA-E9-A3X8 TCGA-E9-A5FK 
        0.82         0.69         0.76        18.41        15.72         0.39 
TCGA-EW-A1IW TCGA-EW-A1J2 TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1PA TCGA-EW-A1PF 
       12.20        13.25        39.78        52.96        18.90        14.43 
TCGA-EW-A1PG TCGA-EW-A2FV TCGA-EW-A3E8 TCGA-EW-A424 TCGA-GI-A2C8 TCGA-GM-A2D9 
       34.52        14.04        21.27        10.59         6.97        59.57 
TCGA-GM-A2DA TCGA-GM-A2DC TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM 
      194.27        53.52        61.91        62.33        90.81        76.64 
TCGA-GM-A2DN TCGA-GM-A3NW TCGA-GM-A3XG TCGA-GM-A3XN TCGA-GM-A4E0 TCGA-GM-A5PV 
       77.33       110.50        32.25        53.92        57.63        13.55 
TCGA-GM-A5PX TCGA-JL-A3YX TCGA-LL-A440 TCGA-LL-A50Y TCGA-LL-A5YL TCGA-LQ-A4E4 
       18.12        11.57         0.66         6.90         5.52        15.91 
TCGA-MS-A51U TCGA-OK-A5Q2 TCGA-OL-A5DA TCGA-OL-A5RU TCGA-OL-A5RV TCGA-OL-A5RX 
        2.79         2.10        44.58        27.65        24.10        16.87 
TCGA-OL-A5RY TCGA-OL-A66H TCGA-OL-A66J TCGA-OL-A66K 
       14.10        14.73        54.51        33.90 

$subtype2
TCGA-A1-A0SG TCGA-A1-A0SH TCGA-A1-A0SI TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A1-A0SN 
       14.24        47.24        20.84        14.01         7.96        39.32 
TCGA-A1-A0SQ TCGA-A2-A04R TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CQ TCGA-A2-A0CS 
       18.18        82.16        64.04        36.13        88.57        75.55 
TCGA-A2-A0D3 TCGA-A2-A0ET TCGA-A2-A0EU TCGA-A2-A0SV TCGA-A2-A0SW TCGA-A2-A0T1 
       28.77        35.05        34.29        27.12        44.84        17.10 
TCGA-A2-A0T3 TCGA-A2-A0T5 TCGA-A2-A0YF TCGA-A2-A0YH TCGA-A2-A0YI TCGA-A2-A0YT 
       18.71        17.46        15.42        21.63        14.50        23.77 
TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FZ TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C 
       23.47        17.36        22.45        19.56        16.31        17.19 
TCGA-A2-A25E TCGA-A2-A3XV TCGA-A7-A0CD TCGA-A7-A0CH TCGA-A7-A0CJ TCGA-A7-A0D9 
       91.92        14.07        38.30        35.47        30.58        37.45 
TCGA-A7-A0DB TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3J0 
       33.07        12.72        11.44        12.13        12.82         2.50 
TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06T TCGA-A8-A06U TCGA-A8-A06Y TCGA-A8-A06Z 
       13.02         1.02        41.06        29.00        26.01         1.02 
TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A07B TCGA-A8-A07F TCGA-A8-A07I TCGA-A8-A07J 
       17.00        53.95        33.01        18.94        14.01        12.00 
TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07Z TCGA-A8-A084 TCGA-A8-A085 
       17.00        10.98         7.96        28.04        15.06        36.95 
TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08B TCGA-A8-A08G TCGA-A8-A08I TCGA-A8-A08J 
       13.02         0.99        23.08        19.92        12.00        37.05 
TCGA-A8-A08O TCGA-A8-A08S TCGA-A8-A08T TCGA-A8-A08X TCGA-A8-A08Z TCGA-A8-A091 
       30.97        19.07        93.04        33.99        40.01        19.07 
TCGA-A8-A092 TCGA-A8-A093 TCGA-A8-A099 TCGA-A8-A09B TCGA-A8-A09C TCGA-A8-A09E 
       16.01        17.92         9.99        12.00         1.02        30.97 
TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09T TCGA-A8-A09X TCGA-A8-A0A1 
       29.95        15.02         1.02        19.00        14.01        12.00 
TCGA-A8-A0A4 TCGA-A8-A0A9 TCGA-A8-A0AD TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23H 
       13.02        13.02        38.04         0.95         2.37         2.66 
TCGA-AC-A3YJ TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 TCGA-AN-A046 TCGA-AN-A049 
        1.28         0.33         0.33         0.23         0.33         0.62 
TCGA-AN-A0AJ TCGA-AN-A0AK TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FK TCGA-AN-A0FN 
        7.99         7.33         0.30         6.41         6.97         7.17 
TCGA-AN-A0XL TCGA-AN-A0XN TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XS TCGA-AN-A0XW 
        0.33         0.33         0.30         0.33         0.33         5.59 
TCGA-AO-A03L TCGA-AO-A03N TCGA-AO-A03O TCGA-AO-A03V TCGA-AO-A0J3 TCGA-AO-A0J5 
       80.28        54.08        81.63        29.13        21.40        24.16 
TCGA-AO-A0J7 TCGA-AO-A0J8 TCGA-AO-A0JA TCGA-AO-A0JB TCGA-AO-A0JC TCGA-AO-A0JD 
       20.28        22.36        21.53        50.70        50.86        72.00 
TCGA-AO-A0JE TCGA-AO-A0JJ TCGA-AO-A0JM TCGA-AO-A125 TCGA-AO-A126 TCGA-AO-A12B 
       76.73        62.04        71.80        99.22        93.70        77.56 
TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KP TCGA-AO-A1KS TCGA-AO-A1KT 
       65.52        41.59        28.34        82.62         0.53        17.79 
TCGA-AQ-A04H TCGA-AQ-A04L TCGA-AQ-A1H2 TCGA-AR-A0TQ TCGA-AR-A0TV TCGA-AR-A0TX 
       24.79       130.09        15.62        49.32        29.72         0.49 
TCGA-AR-A0TY TCGA-AR-A0TZ TCGA-AR-A0U3 TCGA-AR-A1AN TCGA-AR-A1AP TCGA-AR-A1AS 
       55.86        43.17        74.40        43.69        39.95        40.83 
TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A24H TCGA-AR-A24L TCGA-AR-A24M 
       41.82        42.58        35.24       109.58        73.02        65.42 
TCGA-AR-A24N TCGA-AR-A24R TCGA-AR-A24S TCGA-AR-A24V TCGA-AR-A24X TCGA-AR-A24Z 
       68.19        57.37        62.07        54.18        48.16        51.75 
TCGA-AR-A250 TCGA-AR-A252 TCGA-AR-A254 TCGA-AR-A255 TCGA-AR-A2LK TCGA-B6-A0I5 
       56.12        40.64        39.85        34.78        42.84       149.56 
TCGA-B6-A0I8 TCGA-B6-A0I9 TCGA-B6-A0IA TCGA-B6-A0IB TCGA-B6-A0IC TCGA-B6-A0IG 
       24.62        12.13       220.87       129.57        50.70       146.50 
TCGA-B6-A0IM TCGA-B6-A0IN TCGA-B6-A0IO TCGA-B6-A0IP TCGA-B6-A0RG TCGA-B6-A0RH 
      126.12        84.59       110.14       110.93        68.45       188.98 
TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RN TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0RV 
      234.25        81.17       172.96       162.02       102.77       157.41 
TCGA-B6-A0WS TCGA-B6-A0WT TCGA-B6-A0WV TCGA-B6-A0WW TCGA-B6-A0WZ TCGA-B6-A0X0 
       97.48       188.68        79.63        17.95       129.57       129.70 
TCGA-B6-A0X4 TCGA-B6-A0X5 TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0AW TCGA-BH-A0AY 
       28.24        68.94       139.17        24.53        20.45        25.55 
TCGA-BH-A0B0 TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B7 TCGA-BH-A0B8 TCGA-BH-A0BC 
       46.92        37.74        39.16        56.98        51.58        32.02 
TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BP TCGA-BH-A0BR TCGA-BH-A0BS TCGA-BH-A0BT 
       21.70        36.72        48.69        53.65        53.92        45.57 
TCGA-BH-A0BV TCGA-BH-A0C7 TCGA-BH-A0DG TCGA-BH-A0DH TCGA-BH-A0DK TCGA-BH-A0DP 
       49.94        42.90        23.44        38.01        13.91        15.65 
TCGA-BH-A0DQ TCGA-BH-A0DS TCGA-BH-A0DX TCGA-BH-A0DZ TCGA-BH-A0E1 TCGA-BH-A0E7 
        3.22         2.53        47.41        16.27        15.68        44.78 
TCGA-BH-A0EI TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H5 TCGA-BH-A0H6 TCGA-BH-A0H7 
       24.43        10.78        15.16        35.51        24.56        23.05 
TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HF TCGA-BH-A0HI TCGA-BH-A0HK 
       41.00        52.96        26.50        23.90        20.35         5.85 
TCGA-BH-A0HL TCGA-BH-A0HN TCGA-BH-A0HO TCGA-BH-A0HQ TCGA-BH-A0HU TCGA-BH-A0HW 
        2.37        16.96         2.50        36.85        12.89        51.29 
TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A0W7 TCGA-BH-A18I TCGA-BH-A18J 
       27.25        50.76        23.93        44.81         7.23        20.09 
TCGA-BH-A18K TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-BH-A1EN TCGA-BH-A1ES 
       90.81        37.74        30.28        66.05        69.93       113.82 
TCGA-BH-A1ET TCGA-BH-A1EV TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F8 
       82.85        12.00        17.69        31.53        89.16        24.66 
TCGA-BH-A1FG TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FR TCGA-BH-A202 
      122.89        63.35        55.00        45.63       144.59         0.72 
TCGA-BH-A204 TCGA-BH-A208 TCGA-BH-A209 TCGA-C8-A12Q TCGA-C8-A138 TCGA-C8-A1HI 
       83.31        57.83       130.16        12.99         0.23         0.07 
TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A1HN TCGA-C8-A26V TCGA-C8-A273 
        0.23         0.07         0.20         0.07         0.30         0.20 
TCGA-C8-A274 TCGA-C8-A27A TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A146 
        0.03        12.20        11.90        13.25        20.58        21.14 
TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE 
       14.17        17.49        16.50        15.78        18.15        18.90 
TCGA-D8-A1JF TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS 
       12.03        18.97        20.09        20.38        21.01        12.20 
TCGA-D8-A1JT TCGA-D8-A1X5 TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1X9 TCGA-D8-A1XA 
       13.32         5.62         7.76         2.79        12.49         9.01 
TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XO TCGA-D8-A1XR 
        2.66         5.10         6.48         6.44         7.96        15.85 
TCGA-D8-A1XS TCGA-D8-A1XU TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A1Y3 
       16.31        12.99         2.66         5.46         3.78         4.08 
TCGA-D8-A27V TCGA-D8-A3Z6 TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A 
       12.53         6.05        43.00        59.41        46.59        40.41 
TCGA-E2-A10B TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T 
       37.51        40.08        28.44        44.65        33.17        33.30 
TCGA-E2-A14V TCGA-E2-A152 TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 
       34.22        27.12        23.24        19.43        21.04        23.87 
TCGA-E2-A15C TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K 
       22.78        18.18        12.92        17.39        19.36         9.01 
TCGA-E2-A15L TCGA-E2-A15M TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T 
       20.58         7.69        12.99        17.06        14.07        14.99 
TCGA-E2-A1B4 TCGA-E2-A1B5 TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IL TCGA-E2-A1IN 
       29.95        32.32        38.30        32.78         3.85        22.19 
TCGA-E2-A1IO TCGA-E2-A1IU TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A1LB 
       20.94        11.08        39.62        19.63        24.59        40.47 
TCGA-E2-A1LS TCGA-E2-A2P6 TCGA-E9-A1NI TCGA-E9-A1R2 TCGA-E9-A1R4 TCGA-E9-A1R5 
       15.45         5.49        10.09         0.62         6.08         1.38 
TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RA TCGA-E9-A1RC TCGA-E9-A1RE TCGA-E9-A1RF 
        2.76        21.17         0.95        40.37        21.63         6.54 
TCGA-E9-A1RG TCGA-E9-A1RI TCGA-E9-A227 TCGA-E9-A229 TCGA-E9-A247 TCGA-E9-A249 
       21.24        13.94         0.79        13.28         0.39         0.92 
TCGA-E9-A24A TCGA-E9-A54Y TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J1 
        0.33         0.23        39.72         8.48        18.21        18.90 
TCGA-EW-A1J3 TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OV TCGA-EW-A1OX TCGA-EW-A1OY 
       16.57        15.68        28.77        25.94        29.95        29.85 
TCGA-EW-A1OZ TCGA-EW-A1P0 TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PD TCGA-EW-A1PE 
       40.41        41.10        23.11        18.48        13.94        10.52 
TCGA-EW-A2FS TCGA-EW-A2FW TCGA-GM-A3NY TCGA-LL-A442 
       46.75        22.09        38.20         3.58 

$subtype3
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        73.84 
TCGA-A2-A04U TCGA-A2-A04V TCGA-A2-A04X TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CW 
       22.03        63.12        55.43        64.54        24.79        64.01 
TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D1 TCGA-A2-A0D2 TCGA-A2-A0D4 TCGA-A2-A0EQ 
       55.00        21.14        34.55        33.76        25.22        79.76 
TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YG TCGA-A2-A0YM 
       99.19        50.43        17.52         7.96        21.86        31.69 
TCGA-A2-A1G1 TCGA-A2-A25D TCGA-A2-A25F TCGA-A2-A3XS TCGA-A2-A3XT TCGA-A2-A3XU 
       19.17        18.15        10.59        33.93        83.01        29.98 
TCGA-A2-A3XX TCGA-A2-A3XY TCGA-A2-A3XZ TCGA-A2-A3Y0 TCGA-A2-A4RX TCGA-A2-A4S0 
       38.40        34.98        31.96        38.33         9.01         8.91 
TCGA-A2-A4S1 TCGA-A2-A4S3 TCGA-A7-A0CE TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E 
       12.00         3.42        35.31        12.26         8.78        10.72 
TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I TCGA-A7-A3IZ TCGA-A7-A3RF TCGA-A7-A4SD 
       15.09        10.95        12.13        10.59        13.41         5.52 
TCGA-A7-A4SE TCGA-A7-A4SF TCGA-A7-A56D TCGA-A7-A5ZV TCGA-A8-A06O TCGA-A8-A06R 
       12.20        12.13         5.82         6.90        13.02        17.95 
TCGA-A8-A079 TCGA-A8-A07C TCGA-A8-A07G TCGA-A8-A07O TCGA-A8-A07R TCGA-A8-A07U 
        9.01        19.07        18.94         9.99         8.98         9.96 
TCGA-A8-A07W TCGA-A8-A082 TCGA-A8-A08L TCGA-A8-A08R TCGA-A8-A097 TCGA-A8-A09I 
        9.99        18.05         9.99         0.99        12.00        33.07 
TCGA-A8-A09Q TCGA-A8-A09R TCGA-A8-A0A7 TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ 
       25.02         8.98         0.99        38.53         1.02         2.27 
TCGA-AN-A04A TCGA-AN-A04C TCGA-AN-A04D TCGA-AN-A0AL TCGA-AN-A0AM TCGA-AN-A0AR 
        2.93         1.78         1.71         6.48         0.16         0.30 
TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FT TCGA-AN-A0FV TCGA-AN-A0FW 
        0.33         7.92         7.56         6.02         0.33         0.36 
TCGA-AN-A0FX TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0G0 TCGA-AN-A0XO TCGA-AN-A0XU 
        0.33         0.33         0.33         0.53        12.33         0.33 
TCGA-AO-A03M TCGA-AO-A03R TCGA-AO-A03T TCGA-AO-A03U TCGA-AO-A0J2 TCGA-AO-A0J4 
       47.84        68.75        47.87        59.05        32.78        17.65 
TCGA-AO-A0J6 TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F 
       37.48        55.33       102.54        96.10        64.04        48.36 
TCGA-AO-A1KQ TCGA-AO-A1KR TCGA-AQ-A04J TCGA-AQ-A0Y5 TCGA-AQ-A54N TCGA-AR-A0TP 
       61.87        70.36        26.93         5.62         2.53        82.88 
TCGA-AR-A0TS TCGA-AR-A0TT TCGA-AR-A0U2 TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI 
       37.41        55.20        83.87        53.49        75.55        61.84 
TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24K 
       52.73        43.53        43.04        17.19        20.19        50.89 
TCGA-AR-A24Q TCGA-AR-A24U TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LL TCGA-AR-A2LR 
       66.02        53.36        45.14        93.83         7.33        20.38 
TCGA-AR-A5QQ TCGA-B6-A0I1 TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0IE TCGA-B6-A0IJ 
       10.59        77.62       143.34        32.78        65.69       176.98 
TCGA-B6-A0IQ TCGA-B6-A0RE TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX 
      140.84       211.53       100.67        89.46       131.21        21.47 
TCGA-B6-A0WY TCGA-B6-A0X7 TCGA-B6-A1KC TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0B3 
      113.75        58.88        43.59       101.52        38.79        39.55 
TCGA-BH-A0B9 TCGA-BH-A0BF TCGA-BH-A0BG TCGA-BH-A0BL TCGA-BH-A0BW TCGA-BH-A0C0 
       51.68        25.68        24.85        44.02        11.67        41.75 
TCGA-BH-A0DD TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0EE TCGA-BH-A0GY 
       45.80        48.23         4.37         9.60        31.00        30.35 
TCGA-BH-A0RX TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18L TCGA-BH-A18Q TCGA-BH-A18R 
        5.59        23.05         2.01        26.66        55.63        37.51 
TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A18V TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC 
        7.36        51.39        51.12        25.81        97.48       114.12 
TCGA-BH-A1FN TCGA-BH-A203 TCGA-BH-A42T TCGA-C8-A1HJ TCGA-C8-A26Y TCGA-C8-A275 
       72.07        38.60         0.99         0.16         0.43         0.03 
TCGA-C8-A278 TCGA-C8-A27B TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 
        0.03         0.99        20.88        13.97        14.17        19.20 
TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1XJ TCGA-D8-A1XK TCGA-D8-A1XL 
       12.03        20.12        20.09        11.57        10.72        10.49 
TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XV TCGA-D8-A1XW TCGA-D8-A1XZ TCGA-D8-A27F 
       16.41         6.35        15.12        12.66         3.95         7.46 
TCGA-D8-A27H TCGA-D8-A27M TCGA-D8-A27R TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R 
        4.60         4.73         2.96        47.15        40.96        38.60 
TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A158 
       31.99        31.92        28.60        17.03        25.41        14.79 
TCGA-E2-A159 TCGA-E2-A15A TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B6 TCGA-E2-A1II 
       25.05        23.34        60.53        53.62        28.47        33.70 
TCGA-E2-A1L7 TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK 
       27.42        28.90        18.87       106.72       102.61         8.75 
TCGA-E2-A1LL TCGA-E2-A573 TCGA-E9-A1R3 TCGA-E9-A1RB TCGA-E9-A1RH TCGA-E9-A22G 
       43.04        22.26         2.10        20.78        20.55        10.19 
TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A248 TCGA-E9-A2JS TCGA-E9-A3QA TCGA-E9-A5FL 
       17.06         0.66         1.91        17.75         0.62         0.26 
TCGA-E9-A5UO TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB 
        0.23        22.82        29.82        30.08         7.86        19.99 
TCGA-EW-A1PC TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A3U0 TCGA-EW-A423 TCGA-GI-A2C9 
        6.12        19.92        55.00        17.49        10.16       110.07 
TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A2DO TCGA-GM-A3XL 
       53.10        43.04        42.71        42.28        53.33        69.30 
TCGA-JL-A3YW TCGA-LL-A441 TCGA-OL-A5D6 TCGA-OL-A5D7 TCGA-OL-A5D8 TCGA-OL-A5RW 
       11.84         2.99        12.66        46.55         7.53        26.20 
TCGA-OL-A5RZ TCGA-OL-A5S0 TCGA-OL-A66I 
       10.29         9.80        23.70 

subtype1 subtype2 subtype3 
    0.03     0.03     0.03 
subtype1 subtype2 subtype3 
  194.27   234.25   211.53 
subtype1 subtype2 subtype3 
   20.78    22.14    21.86 
[1] "0.0 - 194.3 (20.8)" "0.0 - 234.2 (22.1)" "0.0 - 211.5 (21.9)"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
 [25] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
 [31] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [55] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [67] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [73] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
 [79] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [85] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [91] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [97] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[103] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[109] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[115] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[121] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[127] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[133] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[157] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[175] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[187] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[193] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[205] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[217] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[223] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[229] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[235] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[241] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[259] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[277] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[283] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[289] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[295] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[307] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[313] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[319] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[331] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[337] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[349] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[355] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[361] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[379] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[385] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[391] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[397] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[403] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[409] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[415] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[427] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[433] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[439] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[445] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[451] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[457] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[463] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[469] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[481] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[487] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[493] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[499] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[505] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[511] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[517] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[523] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[529] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[535] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[541] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[547] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[553] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[559] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[565] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[571] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[577] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[583] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[589] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[595] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[601] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[607] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[613] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[619] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[625] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[631] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[643] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[649] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[655] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[661] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[667] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[673] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[679] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[685] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[697] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[703] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[709] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[715] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[721] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[733] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[739] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[745] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[751] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[757] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[763] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[769] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[775] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[781] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[787] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[793] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[799] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[805] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[811] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[817] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[823] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[829] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[835] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[841] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[847] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[853] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[859] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[865] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[871] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[877] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[883] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[889] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
 [25] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
 [31] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [55] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [67] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [73] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
 [79] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [85] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [91] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [97] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[103] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[109] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[115] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[121] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[127] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[133] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[157] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[175] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[187] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[193] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[205] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[217] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[223] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[229] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[235] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[241] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[259] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[277] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[283] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[289] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[295] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[307] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[313] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[319] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[331] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[337] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[349] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[355] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[361] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[379] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[385] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[391] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[397] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[403] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[409] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[415] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[427] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[433] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[439] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[445] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[451] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[457] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[463] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[469] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[481] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[487] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[493] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[499] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[505] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[511] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[517] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[523] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[529] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[535] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[541] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[547] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[553] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[559] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[565] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[571] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[577] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[583] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[589] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[595] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[601] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[607] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[613] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[619] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[625] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[631] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[643] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[649] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[655] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[661] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[667] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[673] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[679] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[685] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[697] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[703] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[709] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[715] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[721] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[733] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[739] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[745] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[751] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[757] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[763] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[769] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[775] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[781] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[787] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[793] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[799] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[805] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[811] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[817] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[823] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[829] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[835] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[841] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[847] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[853] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[859] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[865] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[871] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[877] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[883] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[889] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
  [7] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
 [19] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
 [25] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
 [31] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [55] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [61] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [67] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [73] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
 [79] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [85] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [91] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [97] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[103] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[109] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[115] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[121] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[127] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[133] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[157] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[163] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[175] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[181] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[187] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[193] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[205] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[217] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[223] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[229] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[235] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[241] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[253] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[259] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[271] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[277] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[283] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[289] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[295] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[301] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[307] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[313] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[319] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[331] "subtype2" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[337] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[349] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[355] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[361] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[373] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[379] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[385] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[391] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[397] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[403] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[409] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[415] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[427] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[433] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[439] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[445] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[451] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[457] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[463] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[469] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[475] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[481] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[487] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[493] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[499] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[505] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[511] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[517] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[523] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[529] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[535] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[541] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[547] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[553] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[559] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[565] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[571] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype1"
[577] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[583] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[589] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[595] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[601] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[607] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[613] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[619] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[625] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[631] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[637] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[643] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[649] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[655] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[661] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[667] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[673] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[679] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[685] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[691] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[697] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[703] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[709] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[715] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[721] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[727] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[733] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[739] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[745] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[751] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[757] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[763] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[769] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[775] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[781] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[787] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[793] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[799] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[805] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype2"
[811] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[817] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[823] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[829] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[835] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[841] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[847] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[853] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[859] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[865] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[871] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[877] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[883] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[889] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
D9V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      26       25        6        7        62        60         1
  subtype2      36       31        4        1       137        99         1
  subtype3      15       16        1        1       122        54         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         36          5         24        1         0       3
  subtype2         63         15         15       10         0      10
  subtype3         32          5         13        3         1       4
D9V3, multiclass
          vv
clus        T1  T2  T3  T4
  subtype1  83 120  46   6
  subtype2 115 245  40  22
  subtype3  54 180  25   7
D9V4, multiclass
          vv
clus        N0  N1  N2  N3
  subtype1 113  90  25  26
  subtype2 184 152  54  21
  subtype3 150  74  27  15
D9V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        1 207   1  47
  subtype2        1 373  10  38
  subtype3        0 240   3  25
D9V6, multiclass
D9V7, binary
          cls
clus         0   1
  subtype1 255   1
  subtype2 416   6
  subtype3 265   3
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  255    1
  subtype2  416    6
  subtype3  265    3
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      255      416      265
  MALE          1        6        3
          vv
clus       INFILTRATING CARCINOMA NOS INFILTRATING DUCTAL CARCINOMA
  subtype1                          0                           127
  subtype2                          0                           349
  subtype3                          1                           229
          vv
clus       INFILTRATING LOBULAR CARCINOMA MEDULLARY CARCINOMA
  subtype1                            112                   0
  subtype2                             28                   1
  subtype3                             10                   4
          vv
clus       MIXED HISTOLOGY (PLEASE SPECIFY) MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                                7                  5              5
  subtype2                               17                  5             22
  subtype3                                3                  4             16
D9V8, multiclass
D9V9, binary
          cls
clus         0   1
  subtype1  50 206
  subtype2 112 310
  subtype3  67 201
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   50  206
  subtype2  112  310
  subtype3   67  201
     clus
vv    subtype1 subtype2 subtype3
  NO        50      112       67
  YES      206      310      201
D9V10, continuous

Clustering(10) Variable = MIRSEQ_CHIERARCHICAL
D10V1, survival
          sevent
clus2        0   1
  subtype1 171  36
  subtype2 317  33
  subtype3 296  40
subtype1 subtype2 subtype3 
     207      350      336 
subtype1 subtype2 subtype3 
      36       33       40 
$subtype1
TCGA-A1-A0SK TCGA-A1-A0SO TCGA-A1-A0SP TCGA-A2-A04P TCGA-A2-A04Q TCGA-A2-A04T 
       31.79        28.01        19.17        17.98        41.92        73.84 
TCGA-A2-A04U TCGA-A2-A0CL TCGA-A2-A0CM TCGA-A2-A0CY TCGA-A2-A0D0 TCGA-A2-A0D2 
       22.03        64.54        24.79        55.00        21.14        33.76 
TCGA-A2-A0EV TCGA-A2-A0ST TCGA-A2-A0SX TCGA-A2-A0T0 TCGA-A2-A0T2 TCGA-A2-A0YM 
       31.82        99.19        50.43        17.52         7.96        31.69 
TCGA-A2-A1G1 TCGA-A2-A3XS TCGA-A2-A3XT TCGA-A2-A3XU TCGA-A2-A3XX TCGA-A2-A3XY 
       19.17        33.93        83.01        29.98        38.40        34.98 
TCGA-A2-A3Y0 TCGA-A2-A4RW TCGA-A2-A4RX TCGA-A2-A4S1 TCGA-A2-A4S3 TCGA-A7-A0CE 
       38.33         7.30         9.01        12.00         3.42        35.31 
TCGA-A7-A0DA TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A4SD 
       12.26         8.78        10.72        15.09        10.95         5.52 
TCGA-A7-A4SE TCGA-A7-A5ZV TCGA-A8-A06R TCGA-A8-A06U TCGA-A8-A07C TCGA-A8-A07O 
       12.20         6.90        17.95        29.00        19.07         9.99 
TCGA-A8-A07R TCGA-A8-A07U TCGA-A8-A07W TCGA-A8-A082 TCGA-A8-A08R TCGA-A8-A08X 
        8.98         9.96         9.99        18.05         0.99        33.99 
TCGA-A8-A097 TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A04C TCGA-AN-A0AL 
       12.00        38.53         1.02         2.27         1.78         6.48 
TCGA-AN-A0AR TCGA-AN-A0AT TCGA-AN-A0FJ TCGA-AN-A0FL TCGA-AN-A0FW TCGA-AN-A0FX 
        0.30         0.33         7.92         7.56         0.36         0.33 
TCGA-AN-A0FY TCGA-AN-A0FZ TCGA-AN-A0G0 TCGA-AN-A0XU TCGA-AO-A03U TCGA-AO-A0J4 
        0.33         0.33         0.53         0.33        59.05        17.65 
TCGA-AO-A0J6 TCGA-AO-A0JL TCGA-AO-A124 TCGA-AO-A129 TCGA-AO-A12D TCGA-AO-A12F 
       37.48        55.33       102.54        96.10        64.04        48.36 
TCGA-AO-A1KR TCGA-AQ-A04J TCGA-AQ-A0Y5 TCGA-AQ-A54N TCGA-AR-A0TP TCGA-AR-A0TS 
       70.36        26.93         5.62         2.53        82.88        37.41 
TCGA-AR-A0TT TCGA-AR-A0TY TCGA-AR-A0U4 TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ 
       55.20        55.86        53.49        75.55        61.84        52.73 
TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR TCGA-AR-A1AY TCGA-AR-A24Q TCGA-AR-A24S 
       43.53        43.04        17.19        20.19        66.02        62.07 
TCGA-AR-A24U TCGA-AR-A251 TCGA-AR-A256 TCGA-AR-A2LR TCGA-AR-A5QQ TCGA-B6-A0I1 
       53.36        45.14        93.83        20.38        10.59        77.62 
TCGA-B6-A0I2 TCGA-B6-A0I6 TCGA-B6-A0I9 TCGA-B6-A0IJ TCGA-B6-A0IQ TCGA-B6-A0RE 
      143.34        32.78        12.13       176.98       140.84       211.53 
TCGA-B6-A0RS TCGA-B6-A0RT TCGA-B6-A0RU TCGA-B6-A0WX TCGA-B6-A0X7 TCGA-B6-A1KF 
      100.67        89.46       131.21        21.47        58.88       101.52 
TCGA-BH-A0AV TCGA-BH-A0B3 TCGA-BH-A0B7 TCGA-BH-A0B9 TCGA-BH-A0BG TCGA-BH-A0BL 
       38.79        39.55        56.98        51.68        24.85        44.02 
TCGA-BH-A0BW TCGA-BH-A0C3 TCGA-BH-A0DL TCGA-BH-A0E0 TCGA-BH-A0E6 TCGA-BH-A0RX 
       11.67        48.13        48.23         4.37         9.60         5.59 
TCGA-BH-A0WA TCGA-BH-A18G TCGA-BH-A18Q TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A18V 
       23.05         2.01        55.63         7.36        51.39        51.12 
TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN TCGA-BH-A1FU TCGA-BH-A202 
       25.81        97.48       114.12        72.07        72.07         0.72 
TCGA-BH-A203 TCGA-BH-A208 TCGA-C8-A1HJ TCGA-C8-A1HN TCGA-C8-A26X TCGA-C8-A26Y 
       38.60        57.83         0.16         0.07         0.36         0.43 
TCGA-C8-A27B TCGA-D8-A142 TCGA-D8-A143 TCGA-D8-A147 TCGA-D8-A1JC TCGA-D8-A1JF 
        0.99        13.97        14.17        19.20        15.78        12.03 
TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1XK TCGA-D8-A1XQ TCGA-D8-A1XW TCGA-D8-A1XZ 
       20.12        20.09        10.72        16.41        12.66         3.95 
TCGA-D8-A27F TCGA-D8-A27H TCGA-D8-A27M TCGA-D8-A27R TCGA-E2-A14N TCGA-E2-A14P 
        7.46         4.60         4.73         2.96        47.15        40.96 
TCGA-E2-A14R TCGA-E2-A14W TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 
       38.60        31.99        31.92        28.60        17.03        25.41 
TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B6 TCGA-E2-A1II 
       14.79        25.05        60.53        53.62        28.47        33.70 
TCGA-E2-A1LA TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK 
       24.59        28.90        18.87       106.72       102.61         8.75 
TCGA-E2-A1LL TCGA-E2-A1LS TCGA-E2-A573 TCGA-E9-A1RH TCGA-E9-A22G TCGA-E9-A243 
       43.04        15.45        22.26        20.55        10.19        17.06 
TCGA-E9-A244 TCGA-E9-A248 TCGA-E9-A3QA TCGA-E9-A5FL TCGA-EW-A1OW TCGA-EW-A1OY 
        0.66         1.91         0.62         0.26        22.82        29.85 
TCGA-EW-A1P4 TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PH TCGA-EW-A2FR 
       29.82        30.08         7.86        19.99        19.92        55.00 
TCGA-EW-A3U0 TCGA-GI-A2C9 TCGA-GM-A2DA TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DF 
       17.49       110.07       194.27        53.10        43.04        42.71 
TCGA-GM-A2DH TCGA-GM-A3XL TCGA-JL-A3YW TCGA-LL-A441 TCGA-LL-A5YL TCGA-OL-A5D7 
       42.28        69.30        11.84         2.99         5.52        46.55 
TCGA-OL-A5RW TCGA-OL-A5S0 TCGA-OL-A66I 
       26.20         9.80        23.70 

$subtype2
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SE TCGA-A1-A0SF TCGA-A1-A0SH TCGA-A2-A04N 
        8.52        14.37        43.40        48.10        47.24       104.81 
TCGA-A2-A04W TCGA-A2-A04Y TCGA-A2-A0CO TCGA-A2-A0CP TCGA-A2-A0CQ TCGA-A2-A0CR 
       64.04        36.13       112.04        92.48        88.57       107.93 
TCGA-A2-A0CU TCGA-A2-A0CV TCGA-A2-A0CZ TCGA-A2-A0D3 TCGA-A2-A0EM TCGA-A2-A0EN 
        5.16        63.42        53.10        28.77       101.69        89.33 
TCGA-A2-A0EO TCGA-A2-A0EP TCGA-A2-A0ES TCGA-A2-A0EU TCGA-A2-A0EW TCGA-A2-A0EX 
       80.25       107.61        37.05        34.29        29.72        24.72 
TCGA-A2-A0SW TCGA-A2-A0SY TCGA-A2-A0T4 TCGA-A2-A0T5 TCGA-A2-A0T6 TCGA-A2-A0YD 
       44.84        44.28        20.52        17.46        18.90        25.28 
TCGA-A2-A0YI TCGA-A2-A0YK TCGA-A2-A0YL TCGA-A2-A1FZ TCGA-A2-A1G6 TCGA-A2-A259 
       14.50        19.30        14.63        22.45        16.47        52.44 
TCGA-A2-A25A TCGA-A2-A25D TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A3XW TCGA-A2-A3XZ 
      107.70        18.15        20.88        39.62        49.48        31.96 
TCGA-A2-A4RY TCGA-A2-A4S2 TCGA-A7-A0CG TCGA-A7-A0DB TCGA-A7-A13G TCGA-A7-A13H 
        8.81         6.74        34.29        33.07        11.44        29.56 
TCGA-A7-A26E TCGA-A7-A26H TCGA-A7-A26J TCGA-A7-A2KD TCGA-A7-A3IZ TCGA-A7-A3J1 
       13.84        13.12        12.13        12.82        10.59        11.28 
TCGA-A7-A425 TCGA-A7-A426 TCGA-A7-A4SA TCGA-A7-A4SB TCGA-A7-A4SC TCGA-A7-A56D 
       14.66        11.97         7.92         6.58         7.07         5.82 
TCGA-A8-A06Y TCGA-A8-A07E TCGA-A8-A07J TCGA-A8-A08Z TCGA-A8-A093 TCGA-A8-A099 
       26.01        19.99        12.00        40.01        17.92         9.99 
TCGA-A8-A09B TCGA-A8-A09T TCGA-A8-A0A2 TCGA-A8-A0A4 TCGA-A8-A0A6 TCGA-A8-A0AB 
       12.00        19.00        19.00        13.02        21.04        17.00 
TCGA-AC-A23E TCGA-AC-A23G TCGA-AC-A2B8 TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF 
        2.37        10.82         1.45        38.20         1.45        55.40 
TCGA-AC-A2FG TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A3BB 
       36.99        38.79        26.04        50.70         0.92         0.99 
TCGA-AC-A3HN TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3TN TCGA-AC-A3W6 TCGA-AC-A3YI 
        0.69         1.15         9.40         1.12         1.68         1.51 
TCGA-AN-A0FF TCGA-AN-A0FS TCGA-AN-A0XL TCGA-AN-A0XS TCGA-AN-A0XV TCGA-AO-A03N 
        4.60         6.28         0.33         0.33         5.33        54.08 
TCGA-AO-A03T TCGA-AO-A0J8 TCGA-AO-A0J9 TCGA-AO-A0JA TCGA-AO-A0JF TCGA-AO-A0JJ 
       47.87        22.36        53.00        21.53        21.37        62.04 
TCGA-AO-A125 TCGA-AO-A128 TCGA-AO-A12A TCGA-AO-A12E TCGA-AO-A1KO TCGA-AQ-A1H2 
       99.22        94.59        90.54        57.27        14.73        15.62 
TCGA-AQ-A1H3 TCGA-AR-A0TR TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AM TCGA-AR-A1AN 
       13.22         5.26        51.22        48.82        62.56        43.69 
TCGA-AR-A1AU TCGA-AR-A1AV TCGA-AR-A1AX TCGA-AR-A24K TCGA-AR-A24N TCGA-AR-A24O 
       46.32        42.58        36.26        50.89        68.19        65.65 
TCGA-AR-A24P TCGA-AR-A24T TCGA-AR-A24W TCGA-AR-A24X TCGA-AR-A254 TCGA-AR-A2LE 
        0.85        53.26        50.96        48.16        39.85       128.65 
TCGA-AR-A2LH TCGA-AR-A2LK TCGA-AR-A2LL TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO 
       20.22        42.84         7.33        40.01        17.06        20.81 
TCGA-AR-A2LQ TCGA-AR-A5QM TCGA-AR-A5QN TCGA-AR-A5QP TCGA-B6-A0I5 TCGA-B6-A0IB 
       16.96        54.71        16.01        20.45       149.56       129.57 
TCGA-B6-A0IE TCGA-B6-A0IH TCGA-B6-A0IK TCGA-B6-A0IP TCGA-B6-A0RH TCGA-B6-A0RN 
       65.69       112.37        18.77       110.93       188.98       172.96 
TCGA-B6-A0RO TCGA-B6-A0RP TCGA-B6-A0RQ TCGA-B6-A0WS TCGA-B6-A0WV TCGA-B6-A0WW 
      162.02       102.77       140.48        97.48        79.63        17.95 
TCGA-B6-A1KI TCGA-B6-A2IU TCGA-BH-A0B0 TCGA-BH-A0B5 TCGA-BH-A0B6 TCGA-BH-A0BA 
       73.51       170.17        46.92        48.36        56.94        37.22 
TCGA-BH-A0BC TCGA-BH-A0BJ TCGA-BH-A0BM TCGA-BH-A0BO TCGA-BH-A0BQ TCGA-BH-A0BS 
       32.02        21.70        36.72        35.67        27.16        53.92 
TCGA-BH-A0BZ TCGA-BH-A0C1 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DK 
       49.05        43.99        31.17        23.44        22.13        13.91 
TCGA-BH-A0DO TCGA-BH-A0DP TCGA-BH-A0DS TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX 
       17.26        15.65         2.53        38.47        45.17        47.41 
TCGA-BH-A0E2 TCGA-BH-A0E9 TCGA-BH-A0EA TCGA-BH-A0H3 TCGA-BH-A0HF TCGA-BH-A0HI 
       14.30        46.19        32.65        37.78        23.90        20.35 
TCGA-BH-A0HK TCGA-BH-A0HN TCGA-BH-A0HP TCGA-BH-A0HQ TCGA-BH-A0W4 TCGA-BH-A0W5 
        5.85        16.96        13.61        36.85         5.75        42.35 
TCGA-BH-A0W7 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18J TCGA-BH-A18K TCGA-BH-A18M 
       44.81         8.81         7.23        20.09        90.81        72.56 
TCGA-BH-A1EO TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EV TCGA-BH-A1EW TCGA-BH-A1EX 
       91.99        82.85        42.28        12.00        55.69        49.58 
TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A1FL TCGA-BH-A201 TCGA-BH-A209 
      120.62        74.73        36.92        55.00         6.87       130.16 
TCGA-BH-A28O TCGA-BH-A28Q TCGA-BH-A2L8 TCGA-BH-A42T TCGA-BH-A42U TCGA-BH-A42V 
       10.62         6.44        20.12         0.99       109.25         8.91 
TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A26V TCGA-C8-A26W TCGA-C8-A26Z TCGA-C8-A273 
        0.85         0.23         0.30         0.23         0.13         0.20 
TCGA-C8-A274 TCGA-C8-A275 TCGA-C8-A3M7 TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1JB 
        0.03         0.03         0.03        13.48        21.14        18.71 
TCGA-D8-A1JD TCGA-D8-A1JH TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JU TCGA-D8-A1X7 
       18.15        14.01        21.01        12.20        14.70         2.79 
TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XB TCGA-D8-A1XJ TCGA-D8-A1XM TCGA-D8-A1XO 
        8.94        12.49         6.61        11.57        17.69         7.96 
TCGA-D8-A1XS TCGA-D8-A1XY TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A1Y2 TCGA-D8-A27G 
       16.31         2.66         5.46         3.78         2.37        13.45 
TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27N TCGA-D8-A27P TCGA-D8-A27T 
       14.43         9.44         4.11         4.77         0.76        13.05 
TCGA-D8-A27V TCGA-D8-A27W TCGA-D8-A3Z5 TCGA-D8-A3Z6 TCGA-D8-A4Z1 TCGA-E2-A107 
       12.53         0.49        14.50         6.05         7.33        34.39 
TCGA-E2-A108 TCGA-E2-A10C TCGA-E2-A10E TCGA-E2-A10F TCGA-E2-A14Q TCGA-E2-A14U 
       27.52        40.08        28.44        28.87        38.24        43.33 
TCGA-E2-A14V TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15E 
       34.22        23.24        19.43        22.78        17.26        20.68 
TCGA-E2-A15F TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15L TCGA-E2-A15P TCGA-E2-A1B1 
       21.60        18.18        12.92        20.58        19.56        53.03 
TCGA-E2-A1B4 TCGA-E2-A1BD TCGA-E2-A1IF TCGA-E2-A1IH TCGA-E2-A1IJ TCGA-E2-A1IK 
       29.95        17.10        37.41        33.73        28.41        22.62 
TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IU TCGA-E2-A1L6 TCGA-E2-A1L8 TCGA-E2-A1L9 
        3.85        22.19        11.08        54.18        39.62        19.63 
TCGA-E2-A2P5 TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E2-A570 TCGA-E9-A1NI TCGA-E9-A1R0 
       16.90         5.49        15.72        18.05        10.09        14.27 
TCGA-E9-A1R3 TCGA-E9-A1RA TCGA-E9-A1RB TCGA-E9-A1RC TCGA-E9-A1RD TCGA-E9-A226 
        2.10         0.95        20.78        40.37         0.66        20.61 
TCGA-E9-A227 TCGA-E9-A249 TCGA-E9-A295 TCGA-E9-A2JS TCGA-E9-A2JT TCGA-E9-A3X8 
        0.79         0.92         0.69        17.75         0.76        15.72 
TCGA-E9-A5FK TCGA-EW-A1IW TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1J2 TCGA-EW-A1J3 
        0.39        12.20        39.72         8.48        13.25        16.57 
TCGA-EW-A1J5 TCGA-EW-A1OZ TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1P6 TCGA-EW-A1PA 
       15.68        40.41        39.78        52.96        18.48        18.90 
TCGA-EW-A1PD TCGA-EW-A1PE TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FV TCGA-EW-A3E8 
       13.94        10.52        14.43        34.52        14.04        21.27 
TCGA-EW-A424 TCGA-GI-A2C8 TCGA-GM-A2D9 TCGA-GM-A2DC TCGA-GM-A2DI TCGA-GM-A2DK 
       10.59         6.97        59.57        53.52        61.91        62.33 
TCGA-GM-A2DL TCGA-GM-A2DN TCGA-GM-A2DO TCGA-GM-A3NW TCGA-GM-A3NY TCGA-GM-A3XG 
       90.81        77.33        53.33       110.50        38.20        32.25 
TCGA-GM-A3XN TCGA-GM-A4E0 TCGA-GM-A5PV TCGA-GM-A5PX TCGA-JL-A3YX TCGA-LL-A440 
       53.92        57.63        13.55        18.12        11.57         0.66 
TCGA-LL-A50Y TCGA-LQ-A4E4 TCGA-MS-A51U TCGA-OK-A5Q2 TCGA-OL-A5D6 TCGA-OL-A5D8 
        6.90        15.91         2.79         2.10        12.66         7.53 
TCGA-OL-A5DA TCGA-OL-A5RU TCGA-OL-A5RV TCGA-OL-A5RX TCGA-OL-A5RY TCGA-OL-A66H 
       44.58        27.65        24.10        16.87        14.10        14.73 
TCGA-OL-A66J TCGA-OL-A66K 
       54.51        33.90 

$subtype3
TCGA-A1-A0SG TCGA-A1-A0SI TCGA-A1-A0SJ TCGA-A1-A0SM TCGA-A1-A0SN TCGA-A1-A0SQ 
       14.24        20.84        14.01         7.96        39.32        18.18 
TCGA-A2-A04R TCGA-A2-A04V TCGA-A2-A04X TCGA-A2-A0CK TCGA-A2-A0CS TCGA-A2-A0CT 
       82.16        63.12        55.43       125.56        75.55        75.22 
TCGA-A2-A0CW TCGA-A2-A0D1 TCGA-A2-A0D4 TCGA-A2-A0EQ TCGA-A2-A0ER TCGA-A2-A0ET 
       64.01        34.55        25.22        79.76        74.37        35.05 
TCGA-A2-A0EY TCGA-A2-A0SU TCGA-A2-A0SV TCGA-A2-A0T1 TCGA-A2-A0T3 TCGA-A2-A0T7 
       24.16        54.61        27.12        17.10        18.71        20.75 
TCGA-A2-A0YC TCGA-A2-A0YF TCGA-A2-A0YG TCGA-A2-A0YH TCGA-A2-A0YT TCGA-A2-A1FV 
       32.52        15.42        21.86        21.63        23.77        23.47 
TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A1G0 TCGA-A2-A1G4 TCGA-A2-A25B TCGA-A2-A25C 
       17.36        36.79        20.25        19.56        16.31        17.19 
TCGA-A2-A25E TCGA-A2-A25F TCGA-A2-A3XV TCGA-A2-A4S0 TCGA-A7-A0CD TCGA-A7-A0CH 
       91.92        10.59        14.07         8.91        38.30        35.47 
TCGA-A7-A0CJ TCGA-A7-A0D9 TCGA-A7-A13F TCGA-A7-A26I TCGA-A7-A3IY TCGA-A7-A3J0 
       30.58        37.45        12.72        12.13         4.96         2.50 
TCGA-A7-A3RF TCGA-A7-A4SF TCGA-A8-A06O TCGA-A8-A06P TCGA-A8-A06Q TCGA-A8-A06T 
       13.41        12.13        13.02        13.02         1.02        41.06 
TCGA-A8-A06Z TCGA-A8-A075 TCGA-A8-A076 TCGA-A8-A079 TCGA-A8-A07B TCGA-A8-A07F 
        1.02        17.00        53.95         9.01        33.01        18.94 
TCGA-A8-A07G TCGA-A8-A07I TCGA-A8-A07L TCGA-A8-A07P TCGA-A8-A07S TCGA-A8-A07Z 
       18.94        14.01        17.00        10.98         7.96        28.04 
TCGA-A8-A084 TCGA-A8-A085 TCGA-A8-A086 TCGA-A8-A08A TCGA-A8-A08B TCGA-A8-A08G 
       15.06        36.95        13.02         0.99        23.08        19.92 
TCGA-A8-A08I TCGA-A8-A08J TCGA-A8-A08L TCGA-A8-A08O TCGA-A8-A08S TCGA-A8-A08T 
       12.00        37.05         9.99        30.97        19.07        93.04 
TCGA-A8-A091 TCGA-A8-A092 TCGA-A8-A095 TCGA-A8-A09A TCGA-A8-A09C TCGA-A8-A09D 
       19.07        16.01        41.95         9.99         1.02        13.02 
TCGA-A8-A09E TCGA-A8-A09I TCGA-A8-A09K TCGA-A8-A09M TCGA-A8-A09N TCGA-A8-A09Q 
       30.97        33.07        29.95        15.02         1.02        25.02 
TCGA-A8-A09R TCGA-A8-A09X TCGA-A8-A0A1 TCGA-A8-A0A7 TCGA-A8-A0A9 TCGA-A8-A0AD 
        8.98        14.01        12.00         0.99        13.02        38.04 
TCGA-AC-A23C TCGA-AC-A23H TCGA-AC-A3YJ TCGA-AN-A03X TCGA-AN-A03Y TCGA-AN-A041 
        0.95         2.66         1.28         0.33         0.33         0.23 
TCGA-AN-A046 TCGA-AN-A049 TCGA-AN-A04A TCGA-AN-A04D TCGA-AN-A0AJ TCGA-AN-A0AK 
        0.33         0.62         2.93         1.71         7.99         7.33 
TCGA-AN-A0AM TCGA-AN-A0AS TCGA-AN-A0FD TCGA-AN-A0FK TCGA-AN-A0FN TCGA-AN-A0FT 
        0.16         0.30         6.41         6.97         7.17         6.02 
TCGA-AN-A0FV TCGA-AN-A0XN TCGA-AN-A0XO TCGA-AN-A0XP TCGA-AN-A0XR TCGA-AN-A0XT 
        0.33         0.33        12.33         0.30         0.33         0.33 
TCGA-AN-A0XW TCGA-AO-A03L TCGA-AO-A03M TCGA-AO-A03O TCGA-AO-A03R TCGA-AO-A03V 
        5.59        80.28        47.84        81.63        68.75        29.13 
TCGA-AO-A0J2 TCGA-AO-A0J3 TCGA-AO-A0J5 TCGA-AO-A0J7 TCGA-AO-A0JB TCGA-AO-A0JC 
       32.78        21.40        24.16        20.28        50.70        50.86 
TCGA-AO-A0JD TCGA-AO-A0JE TCGA-AO-A0JG TCGA-AO-A0JI TCGA-AO-A0JM TCGA-AO-A126 
       72.00        76.73        26.24        38.53        71.80        93.70 
TCGA-AO-A12B TCGA-AO-A12C TCGA-AO-A12G TCGA-AO-A12H TCGA-AO-A1KP TCGA-AO-A1KQ 
       77.56        65.52        41.59        28.34        82.62        61.87 
TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A04H TCGA-AQ-A04L TCGA-AQ-A54O TCGA-AR-A0TQ 
        0.53        17.79        24.79       130.09        21.86        49.32 
TCGA-AR-A0TV TCGA-AR-A0TX TCGA-AR-A0TZ TCGA-AR-A0U2 TCGA-AR-A0U3 TCGA-AR-A1AP 
       29.72         0.49        43.17        83.87        74.40        39.95 
TCGA-AR-A1AS TCGA-AR-A1AT TCGA-AR-A1AW TCGA-AR-A24H TCGA-AR-A24L TCGA-AR-A24M 
       40.83        41.82        35.24       109.58        73.02        65.42 
TCGA-AR-A24R TCGA-AR-A24V TCGA-AR-A24Z TCGA-AR-A250 TCGA-AR-A252 TCGA-AR-A255 
       57.37        54.18        51.75        56.12        40.64        34.78 
TCGA-B6-A0I8 TCGA-B6-A0IA TCGA-B6-A0IC TCGA-B6-A0IG TCGA-B6-A0IM TCGA-B6-A0IN 
       24.62       220.87        50.70       146.50       126.12        84.59 
TCGA-B6-A0IO TCGA-B6-A0RG TCGA-B6-A0RI TCGA-B6-A0RL TCGA-B6-A0RM TCGA-B6-A0RV 
      110.14        68.45       234.25        81.17        78.02       157.41 
TCGA-B6-A0WT TCGA-B6-A0WY TCGA-B6-A0WZ TCGA-B6-A0X0 TCGA-B6-A0X4 TCGA-B6-A0X5 
      188.68       113.75       129.57       129.70        28.24        68.94 
TCGA-B6-A1KC TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0AW TCGA-BH-A0AY TCGA-BH-A0AZ 
       43.59       139.17        24.53        20.45        25.55        28.50 
TCGA-BH-A0B1 TCGA-BH-A0B4 TCGA-BH-A0B8 TCGA-BH-A0BD TCGA-BH-A0BF TCGA-BH-A0BP 
       37.74        39.16        51.58        18.21        25.68        48.69 
TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0BV TCGA-BH-A0C0 TCGA-BH-A0C7 TCGA-BH-A0DD 
       53.65        45.57        49.94        41.75        42.90        45.80 
TCGA-BH-A0DH TCGA-BH-A0DQ TCGA-BH-A0DZ TCGA-BH-A0E1 TCGA-BH-A0E7 TCGA-BH-A0EE 
       38.01         3.22        16.27        15.68        44.78        31.00 
TCGA-BH-A0EI TCGA-BH-A0GY TCGA-BH-A0GZ TCGA-BH-A0H0 TCGA-BH-A0H5 TCGA-BH-A0H6 
       24.43        30.35        10.78        15.16        35.51        24.56 
TCGA-BH-A0H7 TCGA-BH-A0H9 TCGA-BH-A0HA TCGA-BH-A0HB TCGA-BH-A0HL TCGA-BH-A0HO 
       23.05        41.00        52.96        26.50         2.37         2.50 
TCGA-BH-A0HU TCGA-BH-A0HW TCGA-BH-A0HX TCGA-BH-A0HY TCGA-BH-A0W3 TCGA-BH-A18L 
       12.89        51.29        27.25        50.76        23.93        26.66 
TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A1EN TCGA-BH-A1ES 
       37.74        30.28        37.51        66.05        69.93       113.82 
TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FG TCGA-BH-A1FJ 
       17.69        31.53        89.16        24.66       122.89        63.35 
TCGA-BH-A1FM TCGA-BH-A1FR TCGA-BH-A204 TCGA-C8-A12Q TCGA-C8-A1HI TCGA-C8-A1HK 
       45.63       144.59        83.31        12.99         0.07         0.23 
TCGA-C8-A1HL TCGA-C8-A1HM TCGA-C8-A278 TCGA-C8-A27A TCGA-C8-A3M8 TCGA-D8-A13Y 
        0.07         0.20         0.03        12.20         0.23        11.90 
TCGA-D8-A13Z TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA 
       20.88        13.25        20.58        14.17        17.49        16.50 
TCGA-D8-A1JE TCGA-D8-A1JG TCGA-D8-A1JI TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JT 
       18.90        12.03        18.97        20.09        20.38        13.32 
TCGA-D8-A1X5 TCGA-D8-A1X6 TCGA-D8-A1XA TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XF 
        5.62         7.76         9.01         2.66         5.10         6.48 
TCGA-D8-A1XG TCGA-D8-A1XL TCGA-D8-A1XR TCGA-D8-A1XT TCGA-D8-A1XU TCGA-D8-A1XV 
        6.44        10.49        15.85         6.35        12.99        15.12 
TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-E2-A105 TCGA-E2-A106 TCGA-E2-A109 TCGA-E2-A10A 
        4.08        17.42        43.00        59.41        46.59        40.41 
TCGA-E2-A10B TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A152 TCGA-E2-A155 
       37.51        44.65        33.17        33.30        27.12        21.04 
TCGA-E2-A156 TCGA-E2-A15A TCGA-E2-A15I TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15M 
       23.87        23.34        17.39        19.36         9.01         7.69 
TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B5 TCGA-E2-A1BC 
       12.99        17.06        14.07        14.99        32.32        16.47 
TCGA-E2-A1IE TCGA-E2-A1IG TCGA-E2-A1IO TCGA-E2-A1L7 TCGA-E2-A1LB TCGA-E2-A56Z 
       38.30        32.78        20.94        27.42        40.47         7.20 
TCGA-E9-A1R2 TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RE 
        0.62         6.08         1.38         2.76        21.17        21.63 
TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A1RI TCGA-E9-A229 TCGA-E9-A245 TCGA-E9-A247 
        6.54        21.24        13.94        13.28         0.82         0.39 
TCGA-E9-A24A TCGA-E9-A3Q9 TCGA-E9-A54Y TCGA-E9-A5UO TCGA-EW-A1IZ TCGA-EW-A1J1 
        0.33        18.41         0.23         0.23        18.21        18.90 
TCGA-EW-A1J6 TCGA-EW-A1OV TCGA-EW-A1OX TCGA-EW-A1P0 TCGA-EW-A1P5 TCGA-EW-A1PC 
       28.77        25.94        29.95        41.10        23.11         6.12 
TCGA-EW-A2FS TCGA-EW-A2FW TCGA-EW-A423 TCGA-GM-A2DM TCGA-LL-A442 TCGA-OL-A5RZ 
       46.75        22.09        10.16        76.64         3.58        10.29 

subtype1 subtype2 subtype3 
    0.07     0.03     0.03 
subtype1 subtype2 subtype3 
  211.53   188.98   234.25 
subtype1 subtype2 subtype3 
   24.79    20.55    22.57 
[1] "0.1 - 211.5 (24.8)" "0.0 - 189.0 (20.5)" "0.0 - 234.2 (22.6)"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [19] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [25] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [37] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
 [43] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [49] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [61] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [67] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [73] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [85] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
 [97] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[103] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[109] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[121] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[127] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[133] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[145] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[151] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[169] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[175] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[181] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[187] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[193] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[211] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[223] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[229] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[235] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[253] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[259] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[265] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[271] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[283] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[289] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[295] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[307] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[313] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[319] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[331] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[337] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[343] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[355] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[361] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[367] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[373] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[379] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[385] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[397] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[421] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[427] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[433] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[445] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[451] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[457] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[463] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[469] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[475] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[481] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[487] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[493] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[499] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[505] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[511] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[517] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[523] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[529] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[535] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[541] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[547] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[553] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[559] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[565] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[571] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[577] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[583] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[589] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[595] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[601] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[607] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[613] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[619] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[625] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[631] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[637] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[643] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[649] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[655] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[661] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[667] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[679] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[685] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[691] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[697] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[709] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[715] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[721] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[727] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[733] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[739] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[745] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[751] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[757] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[763] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[769] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[775] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[781] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[787] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[793] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[799] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[805] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[811] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[817] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[823] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[829] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[835] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[841] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[847] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[853] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[859] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[865] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[871] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[877] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[883] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[889] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [19] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [25] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [37] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
 [43] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [49] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [61] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [67] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [73] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [85] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
 [97] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[103] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[109] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[121] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[127] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[133] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[145] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[151] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[169] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[175] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[181] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[187] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[193] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[211] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[223] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[229] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[235] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[253] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[259] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[265] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[271] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[283] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[289] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[295] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[307] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[313] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[319] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[331] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[337] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[343] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[355] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[361] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[367] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[373] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[379] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[385] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[397] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[421] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[427] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[433] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[445] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[451] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[457] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[463] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[469] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[475] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[481] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[487] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[493] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[499] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[505] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[511] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[517] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[523] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[529] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[535] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[541] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[547] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[553] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[559] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[565] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[571] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[577] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[583] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[589] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[595] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[601] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[607] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[613] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[619] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[625] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[631] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[637] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[643] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[649] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[655] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[661] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[667] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[679] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[685] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[691] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[697] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[709] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[715] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[721] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[727] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[733] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[739] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[745] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[751] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[757] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[763] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[769] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[775] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[781] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[787] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[793] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[799] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[805] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[811] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[817] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[823] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[829] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[835] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[841] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[847] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[853] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[859] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[865] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[871] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[877] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[883] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[889] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
  [7] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [19] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [25] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [37] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
 [43] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [49] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [61] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [67] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [73] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [85] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
 [97] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[103] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[109] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[115] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[121] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[127] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[133] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[145] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[151] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[157] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[163] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[169] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[175] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[181] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[187] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[193] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[205] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[211] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[223] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[229] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[235] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[247] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[253] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[259] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[265] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[271] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[283] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[289] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[295] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[301] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[307] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[313] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[319] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[325] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[331] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[337] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[343] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[349] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[355] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[361] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[367] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[373] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[379] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[385] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[391] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[397] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[403] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[409] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[415] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[421] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[427] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[433] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[445] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[451] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[457] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[463] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[469] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[475] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[481] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[487] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[493] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[499] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[505] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[511] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[517] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[523] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[529] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[535] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[541] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[547] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[553] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[559] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[565] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[571] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[577] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[583] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[589] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[595] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[601] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[607] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[613] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[619] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[625] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[631] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[637] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[643] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[649] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[655] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[661] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[667] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[673] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[679] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[685] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[691] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[697] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[703] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[709] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[715] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[721] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[727] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[733] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[739] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[745] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[751] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[757] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[763] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[769] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[775] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[781] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[787] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[793] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[799] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[805] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[811] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[817] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[823] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[829] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[835] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[841] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[847] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[853] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[859] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[865] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[871] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[877] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[883] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[889] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
D10V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      15       15        1        1        94        44         0
  subtype2      35       34        5        8       101        82         2
  subtype3      27       23        5        0       126        87         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE TIS STAGE X
  subtype1         26          3         11        4         0       3
  subtype2         44          9         29        4         1       5
  subtype3         61         13         12        6         0       9
D10V3, multiclass
          vv
clus        T1  T2  T3  T4
  subtype1  52 140  19   6
  subtype2 111 181  54  12
  subtype3  89 224  38  17
D10V4, multiclass
          vv
clus        N0  N1  N2  N3
  subtype1 123  58  22  12
  subtype2 167 124  33  34
  subtype3 157 134  51  16
D10V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 194   4  20
  subtype2        1 291   4  63
  subtype3        1 335   6  27
D10V6, multiclass
D10V7, binary
          cls
clus         0   1
  subtype1 217   1
  subtype2 356   3
  subtype3 363   6
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  217    1
  subtype2  356    3
  subtype3  363    6
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      217      356      363
  MALE          1        3        6
          vv
clus       INFILTRATING CARCINOMA NOS INFILTRATING DUCTAL CARCINOMA
  subtype1                          1                           191
  subtype2                          0                           203
  subtype3                          0                           311
          vv
clus       INFILTRATING LOBULAR CARCINOMA MEDULLARY CARCINOMA
  subtype1                              4                   4
  subtype2                            130                   1
  subtype3                             16                   0
          vv
clus       MIXED HISTOLOGY (PLEASE SPECIFY) MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                                2                  0             15
  subtype2                               12                  3             10
  subtype3                               13                 11             18
D10V8, multiclass
D10V9, binary
          cls
clus         0   1
  subtype1  55 163
  subtype2  77 282
  subtype3  97 272
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   55  163
  subtype2   77  282
  subtype3   97  272
     clus
vv    subtype1 subtype2 subtype3
  NO        55       77       97
  YES      163      282      272
D10V10, continuous

Clustering(11) Variable = MIRSEQ_MATURE_CNMF
D11V1, survival
          sevent
clus2        0   1
  subtype1 196  32
  subtype2 172  14
  subtype3 142  25
subtype1 subtype2 subtype3 
     228      186      167 
subtype1 subtype2 subtype3 
      32       14       25 
$subtype1
TCGA-A1-A0SB TCGA-A1-A0SD TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SI TCGA-A1-A0SN 
        8.52        14.37        48.10        14.24        20.84        39.32 
TCGA-A1-A0SQ TCGA-A2-A04W TCGA-A2-A0CS TCGA-A2-A0CV TCGA-A2-A0D3 TCGA-A2-A0ES 
       18.18        64.04        75.55        63.42        28.77        37.05 
TCGA-A2-A0EW TCGA-A2-A0T3 TCGA-A2-A1FW TCGA-A2-A1FZ TCGA-A2-A1G4 TCGA-A2-A25B 
       29.72        18.71        17.36        22.45        19.56        16.31 
TCGA-A2-A25C TCGA-A2-A25E TCGA-A7-A0DB TCGA-A7-A13G TCGA-AC-A23C TCGA-AC-A23E 
       17.19        91.92        33.07        11.44         0.95         2.37 
TCGA-AC-A23H TCGA-AC-A2B8 TCGA-AC-A2FG TCGA-AO-A03V TCGA-AO-A12A TCGA-AO-A12H 
        2.66         1.45        36.99        29.13        90.54        28.34 
TCGA-AO-A1KO TCGA-AO-A1KP TCGA-AO-A1KS TCGA-AO-A1KT TCGA-AQ-A1H2 TCGA-AR-A0TY 
       14.73        82.62         0.53        17.79        15.62        55.86 
TCGA-AR-A1AK TCGA-AR-A1AN TCGA-AR-A1AP TCGA-AR-A1AS TCGA-AR-A1AT TCGA-AR-A1AU 
       51.22        43.69        39.95        40.83        41.82        46.32 
TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A24L TCGA-AR-A24M TCGA-AR-A24N TCGA-AR-A24R 
       42.58        35.24        73.02        65.42        68.19        57.37 
TCGA-AR-A24U TCGA-AR-A24V TCGA-AR-A24W TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 
       53.36        54.18        50.96        48.16        51.75        56.12 
TCGA-AR-A252 TCGA-AR-A255 TCGA-B6-A0RH TCGA-B6-A0WS TCGA-B6-A0X0 TCGA-B6-A1KI 
       40.64        34.78       188.98        97.48       129.70        73.51 
TCGA-BH-A0AU TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B5 TCGA-BH-A0B7 TCGA-BH-A0BP 
       24.53        28.50        46.92        48.36        56.98        48.69 
TCGA-BH-A0BQ TCGA-BH-A0BR TCGA-BH-A0BS TCGA-BH-A0C7 TCGA-BH-A0DE TCGA-BH-A0DG 
       27.16        53.65        53.92        42.90        31.17        23.44 
TCGA-BH-A0DT TCGA-BH-A0DX TCGA-BH-A0EA TCGA-BH-A0EI TCGA-BH-A0H3 TCGA-BH-A0H5 
       38.47        47.41        32.65        24.43        37.78        35.51 
TCGA-BH-A0HA TCGA-BH-A0HN TCGA-BH-A0W7 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18J 
       52.96        16.96        44.81         8.81         7.23        20.09 
TCGA-BH-A18K TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18S TCGA-BH-A1EN TCGA-BH-A1EO 
       90.81        37.74        30.28        66.05        69.93        91.99 
TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EV TCGA-BH-A1EY TCGA-BH-A1F2 TCGA-BH-A1F5 
      113.82        82.85        12.00        17.69        31.53        89.16 
TCGA-BH-A1F8 TCGA-BH-A1FE TCGA-BH-A1FJ TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FR 
       24.66        74.73        63.35        55.00        45.63       144.59 
TCGA-BH-A1FU TCGA-BH-A201 TCGA-BH-A202 TCGA-BH-A204 TCGA-BH-A208 TCGA-C8-A12Q 
       72.07         6.87         0.72        83.31        57.83        12.99 
TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HI TCGA-C8-A1HL TCGA-C8-A1HN TCGA-D8-A13Y 
        0.85         0.23         0.07         0.07         0.07        11.90 
TCGA-D8-A140 TCGA-D8-A141 TCGA-D8-A146 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA 
       13.25        20.58        21.14        14.17        17.49        16.50 
TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JF TCGA-D8-A1JH TCGA-D8-A1JI 
       15.78        18.15        18.90        12.03        14.01        18.97 
TCGA-D8-A1JJ TCGA-D8-A1JN TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1X5 
       20.09        20.38        21.01        12.20        13.32         5.62 
TCGA-D8-A1X6 TCGA-D8-A1X7 TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XD 
        7.76         2.79         9.01         6.61         2.66         5.10 
TCGA-D8-A1XF TCGA-D8-A1XG TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XT 
        6.48         6.44         7.96        15.85        16.31         6.35 
TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XY TCGA-D8-A1XZ TCGA-D8-A1Y0 TCGA-D8-A1Y1 
       12.99        15.12         2.66         3.95         5.46         3.78 
TCGA-D8-A27V TCGA-E2-A10A TCGA-E2-A14O TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V 
       12.53        40.41        44.65        33.17        33.30        34.22 
TCGA-E2-A14W TCGA-E2-A152 TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 
       31.99        27.12        23.24        19.43        21.04        23.87 
TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I TCGA-E2-A15J 
       22.78        17.26        18.18        12.92        17.39        19.36 
TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15M TCGA-E2-A15O TCGA-E2-A15R TCGA-E2-A15S 
        9.01        20.58         7.69        12.99        17.06        14.07 
TCGA-E2-A15T TCGA-E2-A1B4 TCGA-E2-A1BC TCGA-E2-A1BD TCGA-E2-A1IE TCGA-E2-A1IF 
       14.99        29.95        16.47        17.10        38.30        37.41 
TCGA-E2-A1IG TCGA-E2-A1IJ TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO TCGA-E2-A1IU 
       32.78        28.41         3.85        22.19        20.94        11.08 
TCGA-E2-A1L6 TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A1LA TCGA-E2-A1LB 
       54.18        27.42        39.62        19.63        24.59        40.47 
TCGA-E2-A1LS TCGA-E9-A1NI TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 
       15.45        10.09         6.08         1.38         2.76        21.17 
TCGA-E9-A1RA TCGA-E9-A1RC TCGA-E9-A1RE TCGA-E9-A1RF TCGA-E9-A1RG TCGA-E9-A1RI 
        0.95        40.37        21.63         6.54        21.24        13.94 
TCGA-E9-A227 TCGA-E9-A229 TCGA-E9-A247 TCGA-E9-A249 TCGA-E9-A24A TCGA-EW-A1IW 
        0.79        13.28         0.39         0.92         0.33        12.20 
TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1J1 TCGA-EW-A1J2 TCGA-EW-A1J3 TCGA-EW-A1J5 
       39.72         8.48        18.90        13.25        16.57        15.68 
TCGA-EW-A1J6 TCGA-EW-A1OV TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ TCGA-EW-A1P0 
       28.77        25.94        29.95        29.85        40.41        41.10 
TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PD TCGA-EW-A1PE TCGA-EW-A1PF TCGA-EW-A2FW 
       23.11        18.48        13.94        10.52        14.43        22.09 

$subtype2
TCGA-A2-A04N TCGA-A2-A0CK TCGA-A2-A0CO TCGA-A2-A0CR TCGA-A2-A0EP TCGA-A2-A1FV 
      104.81       125.56       112.04       107.93       107.61        23.47 
TCGA-A2-A1FX TCGA-A2-A1G0 TCGA-A2-A1G6 TCGA-A2-A259 TCGA-A2-A25A TCGA-A2-A3KC 
       36.79        20.25        16.47        52.44       107.70        20.88 
TCGA-A2-A3KD TCGA-A2-A3XW TCGA-A2-A4RW TCGA-A2-A4RY TCGA-A2-A4S2 TCGA-A2-A4S3 
       39.62        49.48         7.30         8.81         6.74         3.42 
TCGA-A7-A13H TCGA-A7-A26E TCGA-A7-A26H TCGA-A7-A26J TCGA-A7-A3IY TCGA-A7-A3IZ 
       29.56        13.84        13.12        12.13         4.96        10.59 
TCGA-A7-A3J0 TCGA-A7-A3J1 TCGA-A7-A425 TCGA-A7-A426 TCGA-A7-A4SA TCGA-A7-A4SB 
        2.50        11.28        14.66        11.97         7.92         6.58 
TCGA-A7-A4SC TCGA-A7-A56D TCGA-AC-A23G TCGA-AC-A2BM TCGA-AC-A2FB TCGA-AC-A2FF 
        7.07         5.82        10.82        38.20         1.45        55.40 
TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A3BB TCGA-AC-A3HN 
       38.79        26.04        50.70         0.92         0.99         0.69 
TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3TN TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AO-A12B 
        1.15         9.40         1.12         1.68         1.51        77.56 
TCGA-AQ-A1H3 TCGA-AQ-A54O TCGA-AR-A1AL TCGA-AR-A1AM TCGA-AR-A1AX TCGA-AR-A24K 
       13.22        21.86        48.82        62.56        36.26        50.89 
TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24T TCGA-AR-A2LE TCGA-AR-A2LH TCGA-AR-A2LL 
       65.65         0.85        53.26       128.65        20.22         7.33 
TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-AR-A5QM TCGA-AR-A5QN 
       40.01        17.06        20.81        16.96        54.71        16.01 
TCGA-AR-A5QP TCGA-B6-A0IH TCGA-B6-A0RQ TCGA-B6-A2IU TCGA-BH-A0B6 TCGA-BH-A0BO 
       20.45       112.37       140.48       170.17        56.94        35.67 
TCGA-BH-A0BZ TCGA-BH-A0C1 TCGA-BH-A0C3 TCGA-BH-A0DI TCGA-BH-A0DO TCGA-BH-A0DV 
       49.05        43.99        48.13        22.13        17.26        45.17 
TCGA-BH-A0E2 TCGA-BH-A0E9 TCGA-BH-A0HL TCGA-BH-A18M TCGA-BH-A1EU TCGA-BH-A1EW 
       14.30        46.19         2.37        72.56        42.28        55.69 
TCGA-BH-A1EX TCGA-BH-A1FB TCGA-BH-A1FG TCGA-BH-A1FH TCGA-BH-A28O TCGA-BH-A28Q 
       49.58       120.62       122.89        36.92        10.62         6.44 
TCGA-BH-A2L8 TCGA-BH-A42T TCGA-BH-A42U TCGA-BH-A42V TCGA-C8-A26W TCGA-C8-A26Z 
       20.12         0.99       109.25         8.91         0.23         0.13 
TCGA-C8-A273 TCGA-C8-A274 TCGA-C8-A3M7 TCGA-C8-A3M8 TCGA-D8-A145 TCGA-D8-A1JB 
        0.20         0.03         0.03         0.23        13.48        18.71 
TCGA-D8-A1JU TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XM TCGA-D8-A1Y2 TCGA-D8-A27E 
       14.70         8.94        12.49        17.69         2.37        17.42 
TCGA-D8-A27G TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27P TCGA-D8-A27R 
       13.45        14.43         9.44         4.11         0.76         2.96 
TCGA-D8-A27T TCGA-D8-A27W TCGA-D8-A3Z5 TCGA-D8-A3Z6 TCGA-D8-A4Z1 TCGA-E2-A14Q 
       13.05         0.49        14.50         6.05         7.33        38.24 
TCGA-E2-A14U TCGA-E2-A15E TCGA-E2-A15F TCGA-E2-A15P TCGA-E2-A1B1 TCGA-E2-A1B5 
       43.33        20.68        21.60        19.56        53.03        32.32 
TCGA-E2-A1IH TCGA-E2-A1IK TCGA-E2-A2P5 TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E2-A56Z 
       33.73        22.62        16.90         5.49        15.72         7.20 
TCGA-E2-A570 TCGA-E9-A1R0 TCGA-E9-A1R3 TCGA-E9-A1RD TCGA-E9-A226 TCGA-E9-A245 
       18.05        14.27         2.10         0.66        20.61         0.82 
TCGA-E9-A295 TCGA-E9-A2JT TCGA-E9-A3Q9 TCGA-E9-A3X8 TCGA-E9-A5FK TCGA-E9-A5UO 
        0.69         0.76        18.41        15.72         0.39         0.23 
TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1PA TCGA-EW-A1PG TCGA-EW-A2FS TCGA-EW-A2FV 
       39.78        52.96        18.90        34.52        46.75        14.04 
TCGA-EW-A3E8 TCGA-EW-A423 TCGA-EW-A424 TCGA-GI-A2C8 TCGA-GM-A2D9 TCGA-GM-A2DA 
       21.27        10.16        10.59         6.97        59.57       194.27 
TCGA-GM-A2DC TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DM TCGA-GM-A2DN 
       53.52        61.91        62.33        90.81        76.64        77.33 
TCGA-GM-A3NW TCGA-GM-A3NY TCGA-GM-A3XG TCGA-GM-A3XN TCGA-GM-A4E0 TCGA-GM-A5PV 
      110.50        38.20        32.25        53.92        57.63        13.55 
TCGA-GM-A5PX TCGA-JL-A3YX TCGA-LL-A440 TCGA-LL-A441 TCGA-LL-A442 TCGA-LL-A50Y 
       18.12        11.57         0.66         2.99         3.58         6.90 
TCGA-LL-A5YL TCGA-LQ-A4E4 TCGA-MS-A51U TCGA-OK-A5Q2 TCGA-OL-A5DA TCGA-OL-A5RU 
        5.52        15.91         2.79         2.10        44.58        27.65 
TCGA-OL-A5RV TCGA-OL-A5RX TCGA-OL-A5RY TCGA-OL-A66H TCGA-OL-A66J TCGA-OL-A66K 
       24.10        16.87        14.10        14.73        54.51        33.90 

$subtype3
TCGA-A2-A04U TCGA-A2-A0CL TCGA-A2-A0CW TCGA-A2-A1G1 TCGA-A2-A25D TCGA-A2-A25F 
       22.03        64.54        64.01        19.17        18.15        10.59 
TCGA-A2-A3XS TCGA-A2-A3XT TCGA-A2-A3XU TCGA-A2-A3XV TCGA-A2-A3XX TCGA-A2-A3XY 
       33.93        83.01        29.98        14.07        38.40        34.98 
TCGA-A2-A3XZ TCGA-A2-A3Y0 TCGA-A2-A4RX TCGA-A2-A4S0 TCGA-A2-A4S1 TCGA-A7-A0DA 
       31.96        38.33         9.01         8.91        12.00        12.26 
TCGA-A7-A13D TCGA-A7-A13E TCGA-A7-A13F TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I 
        8.78        10.72        12.72        15.09        10.95        12.13 
TCGA-A7-A2KD TCGA-A7-A3RF TCGA-A7-A4SD TCGA-A7-A4SE TCGA-A7-A4SF TCGA-A7-A5ZV 
       12.82        13.41         5.52        12.20        12.13         6.90 
TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AC-A3YJ TCGA-AN-A0AT TCGA-AO-A12D 
       38.53         1.02         2.27         1.28         0.33        64.04 
TCGA-AO-A12F TCGA-AO-A1KQ TCGA-AO-A1KR TCGA-AQ-A0Y5 TCGA-AQ-A54N TCGA-AR-A0TS 
       48.36        61.87        70.36         5.62         2.53        37.41 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR 
       75.55        61.84        52.73        43.53        43.04        17.19 
TCGA-AR-A1AY TCGA-AR-A24H TCGA-AR-A24Q TCGA-AR-A24S TCGA-AR-A251 TCGA-AR-A254 
       20.19       109.58        66.02        62.07        45.14        39.85 
TCGA-AR-A256 TCGA-AR-A2LK TCGA-AR-A2LR TCGA-AR-A5QQ TCGA-B6-A0I1 TCGA-B6-A1KC 
       93.83        42.84        20.38        10.59        77.62        43.59 
TCGA-B6-A1KF TCGA-B6-A1KN TCGA-BH-A0AV TCGA-BH-A0BF TCGA-BH-A0BG TCGA-BH-A0BL 
      101.52       139.17        38.79        25.68        24.85        44.02 
TCGA-BH-A0BT TCGA-BH-A0BW TCGA-BH-A0DD TCGA-BH-A0DL TCGA-BH-A18G TCGA-BH-A18L 
       45.57        11.67        45.80        48.23         2.01        26.66 
TCGA-BH-A18Q TCGA-BH-A18R TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A18V TCGA-BH-A1F0 
       55.63        37.51         7.36        51.39        51.12        25.81 
TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN TCGA-BH-A203 TCGA-BH-A209 TCGA-C8-A1HJ 
       97.48       114.12        72.07        38.60       130.16         0.16 
TCGA-C8-A1HK TCGA-C8-A1HM TCGA-C8-A26V TCGA-C8-A26X TCGA-C8-A26Y TCGA-C8-A275 
        0.23         0.20         0.30         0.36         0.43         0.03 
TCGA-C8-A278 TCGA-C8-A27A TCGA-C8-A27B TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 
        0.03        12.20         0.99        20.88        13.97        14.17 
TCGA-D8-A147 TCGA-D8-A1JG TCGA-D8-A1JK TCGA-D8-A1JL TCGA-D8-A1XJ TCGA-D8-A1XK 
       19.20        12.03        20.12        20.09        11.57        10.72 
TCGA-D8-A1XL TCGA-D8-A1XQ TCGA-D8-A1XW TCGA-D8-A1Y3 TCGA-D8-A27F TCGA-D8-A27H 
       10.49        16.41        12.66         4.08         7.46         4.60 
TCGA-D8-A27M TCGA-D8-A27N TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R TCGA-E2-A14X 
        4.73         4.77        47.15        40.96        38.60        31.92 
TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 TCGA-E2-A15A 
       28.60        17.03        25.41        14.79        25.05        23.34 
TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1LE TCGA-E2-A1LG 
       60.53        53.62        28.47        33.70        28.90        18.87 
TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL TCGA-E2-A573 TCGA-E9-A1R2 
      106.72       102.61         8.75        43.04        22.26         0.62 
TCGA-E9-A1RB TCGA-E9-A1RH TCGA-E9-A22G TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A248 
       20.78        20.55        10.19        17.06         0.66         1.91 
TCGA-E9-A2JS TCGA-E9-A3QA TCGA-E9-A54Y TCGA-E9-A5FL TCGA-EW-A1IZ TCGA-EW-A1OW 
       17.75         0.62         0.23         0.26        18.21        22.82 
TCGA-EW-A1P4 TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PC TCGA-EW-A1PH 
       29.82        30.08         7.86        19.99         6.12        19.92 
TCGA-EW-A2FR TCGA-EW-A3U0 TCGA-GI-A2C9 TCGA-GM-A2DB TCGA-GM-A2DD TCGA-GM-A2DF 
       55.00        17.49       110.07        53.10        43.04        42.71 
TCGA-GM-A2DH TCGA-GM-A2DO TCGA-GM-A3XL TCGA-JL-A3YW TCGA-OL-A5D6 TCGA-OL-A5D7 
       42.28        53.33        69.30        11.84        12.66        46.55 
TCGA-OL-A5D8 TCGA-OL-A5RW TCGA-OL-A5RZ TCGA-OL-A5S0 TCGA-OL-A66I 
        7.53        26.20        10.29         9.80        23.70 

subtype1 subtype2 subtype3 
    0.07     0.03     0.03 
subtype1 subtype2 subtype3 
  188.98   194.27   139.17 
subtype1 subtype2 subtype3 
  21.155   17.340   20.550 
[1] "0.1 - 189.0 (21.2)" "0.0 - 194.3 (17.3)" "0.0 - 139.2 (20.6)"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [37] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [43] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [61] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [67] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [73] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [85] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
 [91] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [97] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[121] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[133] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[151] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[157] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[181] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[187] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[193] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[199] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[205] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[217] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[229] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[235] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[241] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[247] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[253] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[259] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[265] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[271] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[277] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[283] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[289] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[295] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[301] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[307] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[313] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[325] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[331] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[337] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[349] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[361] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[373] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[379] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[385] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[391] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[397] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[403] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[409] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[415] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[421] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[427] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[433] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[451] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[457] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[463] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[469] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[475] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[481] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[487] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[493] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[499] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[505] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[511] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[517] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[523] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[529] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[535] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[541] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[547] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[553] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[559] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[565] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[571] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[577] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [37] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [43] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [61] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [67] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [73] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [85] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
 [91] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [97] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[121] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[133] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[151] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[157] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[181] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[187] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[193] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[199] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[205] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[217] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[229] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[235] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[241] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[247] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[253] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[259] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[265] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[271] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[277] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[283] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[289] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[295] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[301] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[307] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[313] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[325] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[331] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[337] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[349] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[361] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[373] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[379] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[385] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[391] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[397] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[403] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[409] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[415] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[421] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[427] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[433] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[451] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[457] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[463] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[469] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[475] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[481] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[487] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[493] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[499] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[505] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[511] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[517] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[523] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[529] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[535] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[541] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[547] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[553] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[559] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[565] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[571] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[577] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [25] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [37] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [43] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
 [55] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [61] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [67] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [73] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [85] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
 [91] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [97] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[121] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[133] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[139] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[151] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[157] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[181] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[187] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[193] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[199] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[205] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[217] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[223] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[229] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[235] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[241] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[247] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[253] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[259] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[265] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[271] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[277] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[283] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[289] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[295] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[301] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[307] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[313] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[325] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[331] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[337] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[349] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[361] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[373] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[379] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[385] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[391] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[397] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[403] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[409] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[415] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[421] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[427] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[433] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[451] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[457] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[463] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[469] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[475] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[481] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[487] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[493] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[499] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[505] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[511] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[517] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[523] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[529] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[535] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[541] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[547] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[553] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[559] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[565] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[571] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[577] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
D11V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      34       22        2        2        85        57         0
  subtype2      18       16        4        7        44        49         1
  subtype3      15        6        0        0        83        37         1
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE X
  subtype1         34          5          6        2       3
  subtype2         24          3         23        1       0
  subtype3         26          4          8        0       2
D11V3, multiclass
          vv
clus        T1  T2  T3  T4
  subtype1  96 130  17   9
  subtype2  53  97  37   3
  subtype3  37 121  19   6
D11V4, multiclass
          vv
clus        N0  N1  N2  N3
  subtype1 118  95  27   7
  subtype2  79  71  15  24
  subtype3 100  52  23   8
D11V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        2 221   2  27
  subtype2        0 143   1  46
  subtype3        0 157   0  26
D11V6, multiclass
D11V7, binary
          cls
clus         0   1
  subtype1 248   4
  subtype2 189   1
  subtype3 181   2
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  248    4
  subtype2  189    1
  subtype3  181    2
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      248      189      181
  MALE          4        1        2
          vv
clus       INFILTRATING CARCINOMA NOS INFILTRATING DUCTAL CARCINOMA
  subtype1                          0                           199
  subtype2                          0                            82
  subtype3                          1                           154
          vv
clus       INFILTRATING LOBULAR CARCINOMA MEDULLARY CARCINOMA
  subtype1                             21                   0
  subtype2                             95                   0
  subtype3                              8                   5
          vv
clus       MIXED HISTOLOGY (PLEASE SPECIFY) MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                               13                  5             14
  subtype2                                4                  7              2
  subtype3                                1                  2             12
D11V8, multiclass
D11V9, binary
          cls
clus         0   1
  subtype1  60 192
  subtype2  28 162
  subtype3  43 140
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   60  192
  subtype2   28  162
  subtype3   43  140
     clus
vv    subtype1 subtype2 subtype3
  NO        60       28       43
  YES      192      162      140
D11V10, continuous

Clustering(12) Variable = MIRSEQ_MATURE_CHIERARCHICAL
D12V1, survival
          sevent
clus2        0   1
  subtype1 133   7
  subtype2 243  36
  subtype3 134  28
subtype1 subtype2 subtype3 
     140      279      162 
subtype1 subtype2 subtype3 
       7       36       28 
$subtype1
TCGA-A2-A04N TCGA-A2-A0CO TCGA-A2-A0CR TCGA-A2-A0CW TCGA-A2-A0EP TCGA-A2-A259 
      104.81       112.04       107.93        64.01       107.61        52.44 
TCGA-A2-A25A TCGA-A2-A25D TCGA-A2-A3KC TCGA-A2-A3KD TCGA-A2-A3XW TCGA-A2-A4RY 
      107.70        18.15        20.88        39.62        49.48         8.81 
TCGA-A2-A4S2 TCGA-A7-A0DB TCGA-A7-A13H TCGA-A7-A26E TCGA-A7-A26H TCGA-A7-A26J 
        6.74        33.07        29.56        13.84        13.12        12.13 
TCGA-A7-A3IZ TCGA-A7-A3J1 TCGA-A7-A425 TCGA-A7-A426 TCGA-A7-A4SA TCGA-A7-A4SB 
       10.59        11.28        14.66        11.97         7.92         6.58 
TCGA-A7-A4SC TCGA-A7-A4SF TCGA-A7-A56D TCGA-AC-A23G TCGA-AC-A2BM TCGA-AC-A2FB 
        7.07        12.13         5.82        10.82        38.20         1.45 
TCGA-AC-A2FK TCGA-AC-A2FM TCGA-AC-A2FO TCGA-AC-A2QI TCGA-AC-A3BB TCGA-AC-A3HN 
       38.79        26.04        50.70         0.92         0.99         0.69 
TCGA-AC-A3OD TCGA-AC-A3QP TCGA-AC-A3TN TCGA-AC-A3W6 TCGA-AC-A3YI TCGA-AQ-A54O 
        1.15         9.40         1.12         1.68         1.51        21.86 
TCGA-AR-A1AM TCGA-AR-A24K TCGA-AR-A2LE TCGA-AR-A2LH TCGA-AR-A2LK TCGA-AR-A2LL 
       62.56        50.89       128.65        20.22        42.84         7.33 
TCGA-AR-A2LM TCGA-AR-A2LN TCGA-AR-A2LO TCGA-AR-A2LQ TCGA-AR-A5QM TCGA-AR-A5QP 
       40.01        17.06        20.81        16.96        54.71        20.45 
TCGA-B6-A0RQ TCGA-B6-A2IU TCGA-BH-A0B6 TCGA-BH-A18J TCGA-BH-A1FG TCGA-BH-A28O 
      140.48       170.17        56.94        20.09       122.89        10.62 
TCGA-BH-A28Q TCGA-BH-A2L8 TCGA-BH-A42T TCGA-BH-A42U TCGA-BH-A42V TCGA-C8-A26V 
        6.44        20.12         0.99       109.25         8.91         0.30 
TCGA-C8-A26W TCGA-C8-A26Z TCGA-C8-A273 TCGA-C8-A274 TCGA-C8-A275 TCGA-C8-A3M7 
        0.23         0.13         0.20         0.03         0.03         0.03 
TCGA-D8-A1X8 TCGA-D8-A1X9 TCGA-D8-A1XJ TCGA-D8-A1XL TCGA-D8-A1XM TCGA-D8-A1Y2 
        8.94        12.49        11.57        10.49        17.69         2.37 
TCGA-D8-A27G TCGA-D8-A27I TCGA-D8-A27K TCGA-D8-A27L TCGA-D8-A27P TCGA-D8-A27R 
       13.45        14.43         9.44         4.11         0.76         2.96 
TCGA-D8-A27T TCGA-D8-A27W TCGA-D8-A3Z5 TCGA-D8-A3Z6 TCGA-D8-A4Z1 TCGA-E2-A14U 
       13.05         0.49        14.50         6.05         7.33        43.33 
TCGA-E2-A15E TCGA-E2-A15F TCGA-E2-A2P6 TCGA-E2-A3DX TCGA-E2-A56Z TCGA-E9-A1R0 
       20.68        21.60         5.49        15.72         7.20        14.27 
TCGA-E9-A1R3 TCGA-E9-A1RB TCGA-E9-A1RD TCGA-E9-A226 TCGA-E9-A295 TCGA-E9-A2JS 
        2.10        20.78         0.66        20.61         0.69        17.75 
TCGA-E9-A2JT TCGA-E9-A3X8 TCGA-E9-A54Y TCGA-E9-A5FK TCGA-EW-A1PA TCGA-EW-A2FV 
        0.76        15.72         0.23         0.39        18.90        14.04 
TCGA-EW-A3E8 TCGA-EW-A423 TCGA-EW-A424 TCGA-GI-A2C8 TCGA-GM-A2D9 TCGA-GM-A2DA 
       21.27        10.16        10.59         6.97        59.57       194.27 
TCGA-GM-A2DC TCGA-GM-A2DI TCGA-GM-A2DK TCGA-GM-A2DL TCGA-GM-A2DN TCGA-GM-A2DO 
       53.52        61.91        62.33        90.81        77.33        53.33 
TCGA-GM-A3NW TCGA-GM-A3NY TCGA-GM-A3XG TCGA-GM-A3XN TCGA-GM-A4E0 TCGA-GM-A5PV 
      110.50        38.20        32.25        53.92        57.63        13.55 
TCGA-GM-A5PX TCGA-JL-A3YX TCGA-LL-A440 TCGA-LL-A50Y TCGA-LQ-A4E4 TCGA-MS-A51U 
       18.12        11.57         0.66         6.90        15.91         2.79 
TCGA-OK-A5Q2 TCGA-OL-A5D8 TCGA-OL-A5DA TCGA-OL-A5RU TCGA-OL-A5RV TCGA-OL-A5RX 
        2.10         7.53        44.58        27.65        24.10        16.87 
TCGA-OL-A5RZ TCGA-OL-A66K 
       10.29        33.90 

$subtype2
TCGA-A1-A0SD TCGA-A1-A0SF TCGA-A1-A0SG TCGA-A1-A0SI TCGA-A1-A0SN TCGA-A1-A0SQ 
       14.37        48.10        14.24        20.84        39.32        18.18 
TCGA-A2-A04W TCGA-A2-A0CK TCGA-A2-A0CS TCGA-A2-A0CV TCGA-A2-A0D3 TCGA-A2-A0ES 
       64.04       125.56        75.55        63.42        28.77        37.05 
TCGA-A2-A0EW TCGA-A2-A0T3 TCGA-A2-A1FV TCGA-A2-A1FW TCGA-A2-A1FX TCGA-A2-A1FZ 
       29.72        18.71        23.47        17.36        36.79        22.45 
TCGA-A2-A1G0 TCGA-A2-A1G4 TCGA-A2-A1G6 TCGA-A2-A25B TCGA-A2-A25C TCGA-A2-A25E 
       20.25        19.56        16.47        16.31        17.19        91.92 
TCGA-A2-A3XZ TCGA-A2-A4S0 TCGA-A7-A13F TCGA-A7-A13G TCGA-A7-A2KD TCGA-A7-A3IY 
       31.96         8.91        12.72        11.44        12.82         4.96 
TCGA-A7-A3J0 TCGA-A7-A3RF TCGA-AC-A23C TCGA-AC-A23E TCGA-AC-A23H TCGA-AC-A2B8 
        2.50        13.41         0.95         2.37         2.66         1.45 
TCGA-AC-A2FF TCGA-AC-A2FG TCGA-AC-A3YJ TCGA-AO-A03V TCGA-AO-A12A TCGA-AO-A12B 
       55.40        36.99         1.28        29.13        90.54        77.56 
TCGA-AO-A12H TCGA-AO-A1KO TCGA-AO-A1KP TCGA-AO-A1KQ TCGA-AO-A1KS TCGA-AO-A1KT 
       28.34        14.73        82.62        61.87         0.53        17.79 
TCGA-AQ-A1H2 TCGA-AQ-A1H3 TCGA-AR-A1AK TCGA-AR-A1AL TCGA-AR-A1AN TCGA-AR-A1AP 
       15.62        13.22        51.22        48.82        43.69        39.95 
TCGA-AR-A1AS TCGA-AR-A1AT TCGA-AR-A1AV TCGA-AR-A1AW TCGA-AR-A24H TCGA-AR-A24M 
       40.83        41.82        42.58        35.24       109.58        65.42 
TCGA-AR-A24N TCGA-AR-A24O TCGA-AR-A24P TCGA-AR-A24R TCGA-AR-A24T TCGA-AR-A24V 
       68.19        65.65         0.85        57.37        53.26        54.18 
TCGA-AR-A24W TCGA-AR-A24X TCGA-AR-A24Z TCGA-AR-A250 TCGA-AR-A252 TCGA-AR-A255 
       50.96        48.16        51.75        56.12        40.64        34.78 
TCGA-AR-A5QN TCGA-B6-A0IH TCGA-B6-A0RH TCGA-B6-A0WS TCGA-B6-A0X0 TCGA-B6-A1KC 
       16.01       112.37       188.98        97.48       129.70        43.59 
TCGA-B6-A1KI TCGA-B6-A1KN TCGA-BH-A0AU TCGA-BH-A0AZ TCGA-BH-A0B0 TCGA-BH-A0B5 
       73.51       139.17        24.53        28.50        46.92        48.36 
TCGA-BH-A0BF TCGA-BH-A0BO TCGA-BH-A0BP TCGA-BH-A0BQ TCGA-BH-A0BS TCGA-BH-A0BZ 
       25.68        35.67        48.69        27.16        53.92        49.05 
TCGA-BH-A0C1 TCGA-BH-A0C7 TCGA-BH-A0DE TCGA-BH-A0DG TCGA-BH-A0DI TCGA-BH-A0DO 
       43.99        42.90        31.17        23.44        22.13        17.26 
TCGA-BH-A0DT TCGA-BH-A0DV TCGA-BH-A0DX TCGA-BH-A0E2 TCGA-BH-A0E9 TCGA-BH-A0EA 
       38.47        45.17        47.41        14.30        46.19        32.65 
TCGA-BH-A0EI TCGA-BH-A0H3 TCGA-BH-A0H5 TCGA-BH-A0HA TCGA-BH-A0HL TCGA-BH-A0HN 
       24.43        37.78        35.51        52.96         2.37        16.96 
TCGA-BH-A0W7 TCGA-BH-A18F TCGA-BH-A18I TCGA-BH-A18K TCGA-BH-A18L TCGA-BH-A18M 
       44.81         8.81         7.23        90.81        26.66        72.56 
TCGA-BH-A18N TCGA-BH-A18P TCGA-BH-A18R TCGA-BH-A18S TCGA-BH-A1EN TCGA-BH-A1EO 
       37.74        30.28        37.51        66.05        69.93        91.99 
TCGA-BH-A1ES TCGA-BH-A1ET TCGA-BH-A1EU TCGA-BH-A1EV TCGA-BH-A1EY TCGA-BH-A1F2 
      113.82        82.85        42.28        12.00        17.69        31.53 
TCGA-BH-A1F5 TCGA-BH-A1F8 TCGA-BH-A1FB TCGA-BH-A1FE TCGA-BH-A1FH TCGA-BH-A1FJ 
       89.16        24.66       120.62        74.73        36.92        63.35 
TCGA-BH-A1FL TCGA-BH-A1FM TCGA-BH-A1FR TCGA-BH-A201 TCGA-BH-A204 TCGA-BH-A209 
       55.00        45.63       144.59         6.87        83.31       130.16 
TCGA-C8-A137 TCGA-C8-A138 TCGA-C8-A1HI TCGA-C8-A1HK TCGA-C8-A1HL TCGA-C8-A1HM 
        0.85         0.23         0.07         0.23         0.07         0.20 
TCGA-C8-A1HN TCGA-C8-A27A TCGA-C8-A3M8 TCGA-D8-A13Y TCGA-D8-A140 TCGA-D8-A141 
        0.07        12.20         0.23        11.90        13.25        20.58 
TCGA-D8-A145 TCGA-D8-A146 TCGA-D8-A1J8 TCGA-D8-A1J9 TCGA-D8-A1JA TCGA-D8-A1JB 
       13.48        21.14        14.17        17.49        16.50        18.71 
TCGA-D8-A1JC TCGA-D8-A1JD TCGA-D8-A1JE TCGA-D8-A1JH TCGA-D8-A1JI TCGA-D8-A1JN 
       15.78        18.15        18.90        14.01        18.97        20.38 
TCGA-D8-A1JP TCGA-D8-A1JS TCGA-D8-A1JT TCGA-D8-A1JU TCGA-D8-A1X6 TCGA-D8-A1X7 
       21.01        12.20        13.32        14.70         7.76         2.79 
TCGA-D8-A1XA TCGA-D8-A1XB TCGA-D8-A1XC TCGA-D8-A1XD TCGA-D8-A1XF TCGA-D8-A1XG 
        9.01         6.61         2.66         5.10         6.48         6.44 
TCGA-D8-A1XO TCGA-D8-A1XR TCGA-D8-A1XS TCGA-D8-A1XU TCGA-D8-A1XV TCGA-D8-A1XY 
        7.96        15.85        16.31        12.99        15.12         2.66 
TCGA-D8-A1XZ TCGA-D8-A1Y0 TCGA-D8-A1Y1 TCGA-D8-A1Y3 TCGA-D8-A27E TCGA-D8-A27V 
        3.95         5.46         3.78         4.08        17.42        12.53 
TCGA-E2-A10A TCGA-E2-A14O TCGA-E2-A14Q TCGA-E2-A14S TCGA-E2-A14T TCGA-E2-A14V 
       40.41        44.65        38.24        33.17        33.30        34.22 
TCGA-E2-A14W TCGA-E2-A152 TCGA-E2-A153 TCGA-E2-A154 TCGA-E2-A155 TCGA-E2-A156 
       31.99        27.12        23.24        19.43        21.04        23.87 
TCGA-E2-A15A TCGA-E2-A15C TCGA-E2-A15D TCGA-E2-A15G TCGA-E2-A15H TCGA-E2-A15I 
       23.34        22.78        17.26        18.18        12.92        17.39 
TCGA-E2-A15J TCGA-E2-A15K TCGA-E2-A15L TCGA-E2-A15M TCGA-E2-A15O TCGA-E2-A15P 
       19.36         9.01        20.58         7.69        12.99        19.56 
TCGA-E2-A15R TCGA-E2-A15S TCGA-E2-A15T TCGA-E2-A1B1 TCGA-E2-A1B4 TCGA-E2-A1B5 
       17.06        14.07        14.99        53.03        29.95        32.32 
TCGA-E2-A1BC TCGA-E2-A1BD TCGA-E2-A1IE TCGA-E2-A1IF TCGA-E2-A1IG TCGA-E2-A1IH 
       16.47        17.10        38.30        37.41        32.78        33.73 
TCGA-E2-A1IJ TCGA-E2-A1IK TCGA-E2-A1IL TCGA-E2-A1IN TCGA-E2-A1IO TCGA-E2-A1IU 
       28.41        22.62         3.85        22.19        20.94        11.08 
TCGA-E2-A1L6 TCGA-E2-A1L7 TCGA-E2-A1L8 TCGA-E2-A1L9 TCGA-E2-A570 TCGA-E9-A1NI 
       54.18        27.42        39.62        19.63        18.05        10.09 
TCGA-E9-A1R4 TCGA-E9-A1R5 TCGA-E9-A1R6 TCGA-E9-A1R7 TCGA-E9-A1RA TCGA-E9-A1RC 
        6.08         1.38         2.76        21.17         0.95        40.37 
TCGA-E9-A1RE TCGA-E9-A1RG TCGA-E9-A1RI TCGA-E9-A227 TCGA-E9-A229 TCGA-E9-A245 
       21.63        21.24        13.94         0.79        13.28         0.82 
TCGA-E9-A247 TCGA-E9-A249 TCGA-E9-A24A TCGA-E9-A3Q9 TCGA-E9-A5UO TCGA-EW-A1IW 
        0.39         0.92         0.33        18.41         0.23        12.20 
TCGA-EW-A1IX TCGA-EW-A1IY TCGA-EW-A1IZ TCGA-EW-A1J1 TCGA-EW-A1J2 TCGA-EW-A1J3 
       39.72         8.48        18.21        18.90        13.25        16.57 
TCGA-EW-A1J5 TCGA-EW-A1J6 TCGA-EW-A1OV TCGA-EW-A1OX TCGA-EW-A1OY TCGA-EW-A1OZ 
       15.68        28.77        25.94        29.95        29.85        40.41 
TCGA-EW-A1P0 TCGA-EW-A1P1 TCGA-EW-A1P3 TCGA-EW-A1P5 TCGA-EW-A1P6 TCGA-EW-A1PD 
       41.10        39.78        52.96        23.11        18.48        13.94 
TCGA-EW-A1PE TCGA-EW-A1PF TCGA-EW-A1PG TCGA-EW-A2FS TCGA-EW-A2FW TCGA-GM-A2DM 
       10.52        14.43        34.52        46.75        22.09        76.64 
TCGA-LL-A442 TCGA-OL-A66H TCGA-OL-A66J 
        3.58        14.73        54.51 

$subtype3
TCGA-A1-A0SB TCGA-A2-A04U TCGA-A2-A0CL TCGA-A2-A1G1 TCGA-A2-A25F TCGA-A2-A3XS 
        8.52        22.03        64.54        19.17        10.59        33.93 
TCGA-A2-A3XT TCGA-A2-A3XU TCGA-A2-A3XV TCGA-A2-A3XX TCGA-A2-A3XY TCGA-A2-A3Y0 
       83.01        29.98        14.07        38.40        34.98        38.33 
TCGA-A2-A4RW TCGA-A2-A4RX TCGA-A2-A4S1 TCGA-A2-A4S3 TCGA-A7-A0DA TCGA-A7-A13D 
        7.30         9.01        12.00         3.42        12.26         8.78 
TCGA-A7-A13E TCGA-A7-A26F TCGA-A7-A26G TCGA-A7-A26I TCGA-A7-A4SD TCGA-A7-A4SE 
       10.72        15.09        10.95        12.13         5.52        12.20 
TCGA-A7-A5ZV TCGA-AC-A2BK TCGA-AC-A2QH TCGA-AC-A2QJ TCGA-AN-A0AT TCGA-AO-A12D 
        6.90        38.53         1.02         2.27         0.33        64.04 
TCGA-AO-A12F TCGA-AO-A1KR TCGA-AQ-A0Y5 TCGA-AQ-A54N TCGA-AR-A0TS TCGA-AR-A0TY 
       48.36        70.36         5.62         2.53        37.41        55.86 
TCGA-AR-A1AH TCGA-AR-A1AI TCGA-AR-A1AJ TCGA-AR-A1AO TCGA-AR-A1AQ TCGA-AR-A1AR 
       75.55        61.84        52.73        43.53        43.04        17.19 
TCGA-AR-A1AU TCGA-AR-A1AX TCGA-AR-A1AY TCGA-AR-A24L TCGA-AR-A24Q TCGA-AR-A24S 
       46.32        36.26        20.19        73.02        66.02        62.07 
TCGA-AR-A24U TCGA-AR-A251 TCGA-AR-A254 TCGA-AR-A256 TCGA-AR-A2LR TCGA-AR-A5QQ 
       53.36        45.14        39.85        93.83        20.38        10.59 
TCGA-B6-A0I1 TCGA-B6-A1KF TCGA-BH-A0AV TCGA-BH-A0B7 TCGA-BH-A0BG TCGA-BH-A0BL 
       77.62       101.52        38.79        56.98        24.85        44.02 
TCGA-BH-A0BR TCGA-BH-A0BT TCGA-BH-A0BW TCGA-BH-A0C3 TCGA-BH-A0DD TCGA-BH-A0DL 
       53.65        45.57        11.67        48.13        45.80        48.23 
TCGA-BH-A18G TCGA-BH-A18Q TCGA-BH-A18T TCGA-BH-A18U TCGA-BH-A18V TCGA-BH-A1EW 
        2.01        55.63         7.36        51.39        51.12        55.69 
TCGA-BH-A1EX TCGA-BH-A1F0 TCGA-BH-A1F6 TCGA-BH-A1FC TCGA-BH-A1FN TCGA-BH-A1FU 
       49.58        25.81        97.48       114.12        72.07        72.07 
TCGA-BH-A202 TCGA-BH-A203 TCGA-BH-A208 TCGA-C8-A12Q TCGA-C8-A1HJ TCGA-C8-A26X 
        0.72        38.60        57.83        12.99         0.16         0.36 
TCGA-C8-A26Y TCGA-C8-A278 TCGA-C8-A27B TCGA-D8-A13Z TCGA-D8-A142 TCGA-D8-A143 
        0.43         0.03         0.99        20.88        13.97        14.17 
TCGA-D8-A147 TCGA-D8-A1JF TCGA-D8-A1JG TCGA-D8-A1JJ TCGA-D8-A1JK TCGA-D8-A1JL 
       19.20        12.03        12.03        20.09        20.12        20.09 
TCGA-D8-A1X5 TCGA-D8-A1XK TCGA-D8-A1XQ TCGA-D8-A1XT TCGA-D8-A1XW TCGA-D8-A27F 
        5.62        10.72        16.41         6.35        12.66         7.46 
TCGA-D8-A27H TCGA-D8-A27M TCGA-D8-A27N TCGA-E2-A14N TCGA-E2-A14P TCGA-E2-A14R 
        4.60         4.73         4.77        47.15        40.96        38.60 
TCGA-E2-A14X TCGA-E2-A14Y TCGA-E2-A14Z TCGA-E2-A150 TCGA-E2-A158 TCGA-E2-A159 
       31.92        28.60        17.03        25.41        14.79        25.05 
TCGA-E2-A1AZ TCGA-E2-A1B0 TCGA-E2-A1B6 TCGA-E2-A1II TCGA-E2-A1LA TCGA-E2-A1LB 
       60.53        53.62        28.47        33.70        24.59        40.47 
TCGA-E2-A1LE TCGA-E2-A1LG TCGA-E2-A1LH TCGA-E2-A1LI TCGA-E2-A1LK TCGA-E2-A1LL 
       28.90        18.87       106.72       102.61         8.75        43.04 
TCGA-E2-A1LS TCGA-E2-A2P5 TCGA-E2-A573 TCGA-E9-A1R2 TCGA-E9-A1RF TCGA-E9-A1RH 
       15.45        16.90        22.26         0.62         6.54        20.55 
TCGA-E9-A22G TCGA-E9-A243 TCGA-E9-A244 TCGA-E9-A248 TCGA-E9-A3QA TCGA-E9-A5FL 
       10.19        17.06         0.66         1.91         0.62         0.26 
TCGA-EW-A1OW TCGA-EW-A1P4 TCGA-EW-A1P7 TCGA-EW-A1P8 TCGA-EW-A1PB TCGA-EW-A1PC 
       22.82        29.82        30.08         7.86        19.99         6.12 
TCGA-EW-A1PH TCGA-EW-A2FR TCGA-EW-A3U0 TCGA-GI-A2C9 TCGA-GM-A2DB TCGA-GM-A2DD 
       19.92        55.00        17.49       110.07        53.10        43.04 
TCGA-GM-A2DF TCGA-GM-A2DH TCGA-GM-A3XL TCGA-JL-A3YW TCGA-LL-A441 TCGA-LL-A5YL 
       42.71        42.28        69.30        11.84         2.99         5.52 
TCGA-OL-A5D6 TCGA-OL-A5D7 TCGA-OL-A5RW TCGA-OL-A5RY TCGA-OL-A5S0 TCGA-OL-A66I 
       12.66        46.55        26.20        14.10         9.80        23.70 

subtype1 subtype2 subtype3 
    0.03     0.07     0.03 
subtype1 subtype2 subtype3 
  194.27   188.98   114.12 
subtype1 subtype2 subtype3 
  14.350   22.090   22.145 
[1] "0.0 - 194.3 (14.3)" "0.1 - 189.0 (22.1)" "0.0 - 114.1 (22.1)"
  [1] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [19] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [31] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [43] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [49] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [55] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [61] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [67] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [85] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [91] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[109] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[121] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[145] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[151] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[169] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[175] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[181] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[187] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[193] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[199] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[205] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[211] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[223] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[229] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[253] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[259] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[271] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[277] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[289] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[295] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[301] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[307] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[313] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[337] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[349] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[355] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[367] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[373] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[379] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[385] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[391] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[403] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[409] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[421] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[427] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[439] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[451] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[457] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[469] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[475] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[481] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[487] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[493] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[505] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[511] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[517] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[523] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[529] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[535] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[541] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[547] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[553] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[559] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[565] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[571] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[577] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
  [1] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [19] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [31] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [43] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [49] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [55] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [61] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [67] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [85] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [91] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[109] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[121] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[145] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[151] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[169] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[175] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[181] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[187] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[193] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[199] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[205] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[211] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[223] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[229] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[253] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[259] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[271] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[277] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[289] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[295] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[301] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[307] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[313] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[337] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[349] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[355] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[367] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[373] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[379] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[385] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[391] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[403] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[409] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[421] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[427] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[439] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[451] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[457] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[469] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[475] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[481] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[487] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[493] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[505] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[511] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[517] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[523] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[529] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[535] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[541] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[547] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[553] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[559] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[565] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[571] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[577] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
  [1] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
 [13] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [19] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [31] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [43] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
 [49] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [55] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
 [61] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [67] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
 [73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [79] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [85] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [91] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [97] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[103] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[109] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[121] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[145] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[151] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[163] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[169] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[175] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[181] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[187] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[193] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[199] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[205] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[211] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[217] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[223] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[229] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[253] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[259] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[265] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[271] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[277] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[289] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[295] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[301] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[307] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[313] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[337] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[349] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[355] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[367] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[373] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[379] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[385] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[391] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[397] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[403] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[409] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[421] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[427] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[439] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[445] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[451] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[457] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[463] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[469] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[475] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[481] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[487] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[493] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[499] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[505] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[511] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[517] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[523] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[529] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[535] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[541] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[547] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[553] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[559] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[565] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[571] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[577] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
D12V2, continuous
          vv
clus       STAGE I STAGE IA STAGE IB STAGE II STAGE IIA STAGE IIB STAGE III
  subtype1      11       11        1        7        37        38         2
  subtype2      39       27        4        1        99        67         0
  subtype3      17        6        1        1        76        38         0
          vv
clus       STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV STAGE X
  subtype1         16          3         17        1       0
  subtype2         47          7         11        2       3
  subtype3         21          2          9        0       2
D12V3, multiclass
          vv
clus        T1  T2  T3  T4
  subtype1  37  73  30   4
  subtype2 105 161  31  10
  subtype3  44 114  12   4
D12V4, multiclass
          vv
clus        N0  N1  N2  N3
  subtype1  63  50  12  18
  subtype2 140 117  33  12
  subtype3  94  51  20   9
D12V5, multiclass
          vv
clus       CM0 (I+)  M0  M1  MX
  subtype1        0 105   1  38
  subtype2        2 264   2  39
  subtype3        0 152   0  22
D12V6, multiclass
D12V7, binary
          cls
clus         0   1
  subtype1 143   1
  subtype2 302   5
  subtype3 173   1
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1  143    1
  subtype2  302    5
  subtype3  173    1
        clus
vv       subtype1 subtype2 subtype3
  FEMALE      143      302      173
  MALE          1        5        1
          vv
clus       INFILTRATING CARCINOMA NOS INFILTRATING DUCTAL CARCINOMA
  subtype1                          0                            55
  subtype2                          0                           228
  subtype3                          1                           152
          vv
clus       INFILTRATING LOBULAR CARCINOMA MEDULLARY CARCINOMA
  subtype1                             82                   0
  subtype2                             37                   1
  subtype3                              5                   4
          vv
clus       MIXED HISTOLOGY (PLEASE SPECIFY) MUCINOUS CARCINOMA OTHER  SPECIFY
  subtype1                                2                  3              2
  subtype2                               15                 11             15
  subtype3                                1                  0             11
D12V8, multiclass
D12V9, binary
          cls
clus         0   1
  subtype1  15 129
  subtype2  75 232
  subtype3  41 133
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   15  129
  subtype2   75  232
  subtype3   41  133
     clus
vv    subtype1 subtype2 subtype3
  NO        15       75       41
  YES      129      232      133
D12V10, continuous
> q(save="no")
