Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-IG-A3I8-01A-11D-A248-26	TCGA-IG-A3YA-01A-11D-A248-26	TCGA-IG-A3YB-01A-11D-A248-26	TCGA-IG-A3YC-01A-11D-A248-26	TCGA-L5-A43C-01A-11D-A248-26	TCGA-L5-A43E-01A-11D-A248-26	TCGA-L5-A43H-01A-11D-A248-26	TCGA-L5-A43I-01A-11D-A248-26	TCGA-L5-A43M-01A-11D-A248-26	TCGA-LN-A49K-01A-11D-A248-26	TCGA-LN-A49L-01A-11D-A248-26	TCGA-LN-A49O-01A-11D-A248-26	TCGA-LN-A49P-01A-11D-A248-26	TCGA-LN-A49R-01A-11D-A248-26	TCGA-LN-A49S-01A-11D-A248-26	
Amplification Peak 1	11q13.3	chr11:68849269-70976539(probes 3017:3058)	chr11:69346206-69788612(probes 3022:3037)	chr11:68782199-72117701(probes 3012:3069)	0.00023261	 0.00023261		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	2	2	0	2	0	0	2	2	1	2	0	0	0	2	0	
Amplification Peak 1 - CN values	11q13.3	chr11:68849269-70976539(probes 3017:3058)	chr11:69346206-69788612(probes 3022:3037)	chr11:68782199-72117701(probes 3012:3069)	0.00023261	 0.00023261		Actual Copy Change Given	6	2.9264	-0.081735	2.7609	0.011081	-0.0056485	6	1.635	0.52016	1.594	-0.36857	0.015686	-0.037264	5.2535	0.23792	
