		Clinical Features	Time to Death		AGE		NEOPLASM.DISEASESTAGE		PATHOLOGY.T.STAGE		PATHOLOGY.N.STAGE		PATHOLOGY.M.STAGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		HISTOLOGICAL.TYPE		RADIATIONS.RADIATION.REGIMENINDICATION		NUMBERPACKYEARSSMOKED		YEAROFTOBACCOSMOKINGONSET		COMPLETENESS.OF.RESECTION	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q
1P GAIN MUTATION ANALYSIS	122 (27%)	328	0.76373	1	0.015839	1	0.93039	1	0.86698	1	0.041295	1	0.67965	1	0.9156	1	0.53844	1	0.48199	1	0.61014	1	0.64046	1	0.95096	1	0.58425	1
1Q GAIN MUTATION ANALYSIS	265 (59%)	185	0.69278	1	0.42474	1	0.54926	1	0.61112	1	0.76911	1	0.40547	1	0.29271	1	0.30068	1	0.18674	1	0.81718	1	0.76269	1	0.48907	1	0.72005	1
2P GAIN MUTATION ANALYSIS	142 (32%)	308	0.54949	1	0.010752	1	0.87762	1	0.85458	1	0.19402	1	0.92022	1	0.76098	1	0.69542	1	0.51048	1	1	1	0.23783	1	0.16162	1	0.52758	1
2Q GAIN MUTATION ANALYSIS	126 (28%)	324	0.66064	1	0.41629	1	0.86933	1	0.89463	1	0.31987	1	0.95023	1	0.3439	1	0.55745	1	0.65263	1	1	1	0.13165	1	0.574	1	0.73461	1
3P GAIN MUTATION ANALYSIS	31 (7%)	419	0.8282	1	0.566	1	0.82869	1	0.12549	1	0.095155	1	0.92632	1	0.85314	1	0.25992	1	0.97525	1	0.15174	1	0.6019	1	0.18356	1	0.083903	1
3Q GAIN MUTATION ANALYSIS	72 (16%)	378	0.27096	1	0.49662	1	0.7065	1	0.58903	1	0.6569	1	0.71115	1	0.69968	1	0.40304	1	0.78916	1	0.34287	1	0.37702	1	0.21551	1	0.27129	1
4P GAIN MUTATION ANALYSIS	70 (16%)	380	0.76913	1	0.019731	1	0.096463	1	0.44771	1	0.41029	1	0.79608	1	0.89668	1	0.25338	1	0.32628	1	0.75239	1	0.44868	1	0.78401	1	1	1
4Q GAIN MUTATION ANALYSIS	38 (8%)	412	0.14547	1	0.86687	1	0.11318	1	0.3152	1	1	1	0.96496	1	0.49692	1	0.51146	1	0.71063	1	1	1	0.20954	1	0.99918	1	0.81521	1
5P GAIN MUTATION ANALYSIS	244 (54%)	206	0.19585	1	0.090809	1	0.48556	1	0.24577	1	0.85692	1	0.4772	1	0.1549	1	0.36773	1	0.13468	1	0.36578	1	0.0020757	1	0.58908	1	0.4799	1
5Q GAIN MUTATION ANALYSIS	109 (24%)	341	0.79892	1	0.91835	1	0.90432	1	0.54149	1	0.77588	1	0.81964	1	0.077282	1	0.62473	1	0.28871	1	0.28486	1	0.74689	1	0.85569	1	0.94907	1
6P GAIN MUTATION ANALYSIS	133 (30%)	317	0.10331	1	0.12577	1	0.36663	1	0.39012	1	0.30891	1	0.34689	1	1	1	0.78727	1	0.69554	1	0.45497	1	0.46729	1	0.92757	1	0.70863	1
6Q GAIN MUTATION ANALYSIS	56 (12%)	394	0.68772	1	0.098713	1	0.86139	1	0.78704	1	0.97719	1	0.78255	1	0.668	1	0.45816	1	0.90876	1	0.49156	1	0.8175	1	0.31175	1	0.6694	1
7P GAIN MUTATION ANALYSIS	234 (52%)	216	0.33952	1	0.038031	1	0.38	1	0.30253	1	0.0033263	1	0.70544	1	0.85023	1	0.49728	1	0.075218	1	0.64836	1	0.071355	1	0.24207	1	0.68914	1
7Q GAIN MUTATION ANALYSIS	192 (43%)	258	0.98069	1	0.0029948	1	0.24731	1	0.70869	1	0.010748	1	0.30575	1	0.56677	1	0.7167	1	0.21071	1	0.25916	1	0.1866	1	0.52948	1	0.33436	1
8P GAIN MUTATION ANALYSIS	112 (25%)	338	0.57975	1	0.13996	1	0.7129	1	0.055756	1	0.82533	1	0.96346	1	0.0044323	1	0.36197	1	0.80811	1	0.29424	1	0.63422	1	0.9079	1	0.25527	1
8Q GAIN MUTATION ANALYSIS	215 (48%)	235	0.051649	1	0.040735	1	0.92487	1	0.26472	1	0.10677	1	0.70623	1	0.21968	1	0.86634	1	0.061003	1	1	1	0.88328	1	0.29574	1	0.54602	1
9P GAIN MUTATION ANALYSIS	38 (8%)	412	0.27768	1	0.53515	1	0.80746	1	0.095113	1	0.39628	1	0.61064	1	0.40123	1	0.67263	1	0.14326	1	1	1	0.5881	1	0.64296	1	0.3344	1
9Q GAIN MUTATION ANALYSIS	26 (6%)	424	0.13433	1	0.32412	1	0.39598	1	0.57526	1	0.95518	1	0.26347	1	1	1	0.79555	1	0.97444	1	1	1	0.67252	1	0.90478	1	1	1
10P GAIN MUTATION ANALYSIS	97 (22%)	353	0.71804	1	0.145	1	0.65267	1	0.12348	1	0.015571	1	0.86492	1	0.0027814	1	0.32765	1	0.5868	1	0.27073	1	0.20159	1	0.8333	1	0.22325	1
10Q GAIN MUTATION ANALYSIS	69 (15%)	381	0.97909	1	0.1057	1	0.4476	1	0.13599	1	0.042334	1	0.44454	1	0.0038999	1	0.12318	1	0.34756	1	0.75193	1	0.85014	1	0.67166	1	0.40415	1
11P GAIN MUTATION ANALYSIS	84 (19%)	366	0.24269	1	0.7632	1	0.41764	1	0.51203	1	0.094333	1	0.475	1	0.1147	1	0.32125	1	0.54582	1	1	1	0.1105	1	0.80045	1	0.90032	1
11Q GAIN MUTATION ANALYSIS	104 (23%)	346	0.76729	1	0.0062533	1	0.58535	1	0.85952	1	0.40457	1	0.38189	1	0.50327	1	0.19926	1	0.22845	1	0.79001	1	0.043186	1	0.049968	1	1	1
12P GAIN MUTATION ANALYSIS	120 (27%)	330	0.039375	1	0.01219	1	0.19453	1	0.93375	1	0.60014	1	0.75995	1	0.11033	1	0.45866	1	0.34094	1	1	1	0.18659	1	0.023242	1	0.61603	1
12Q GAIN MUTATION ANALYSIS	116 (26%)	334	0.22815	1	0.077363	1	0.8829	1	0.85412	1	0.57913	1	0.54695	1	0.27988	1	0.39917	1	0.41486	1	1	1	0.33176	1	0.0005105	0.53	0.57201	1
13Q GAIN MUTATION ANALYSIS	38 (8%)	412	0.97691	1	0.99983	1	0.24901	1	0.63741	1	0.15988	1	0.081075	1	0.86688	1	0.12632	1	0.9759	1	0.68182	1	0.52341	1	0.8142	1	0.518	1
14Q GAIN MUTATION ANALYSIS	109 (24%)	341	0.12092	1	0.097363	1	0.92017	1	0.98072	1	0.29685	1	0.0028899	1	0.50822	1	0.2794	1	0.71557	1	0.1818	1	0.13032	1	0.27444	1	0.32119	1
15Q GAIN MUTATION ANALYSIS	31 (7%)	419	0.1146	1	0.98916	1	0.071683	1	0.5428	1	0.045085	1	0.32182	1	0.19367	1	0.74835	1	0.37073	1	0.63994	1	0.61145	1	0.6126	1	0.87903	1
16P GAIN MUTATION ANALYSIS	111 (25%)	339	0.40462	1	0.71172	1	0.97297	1	0.69691	1	0.3514	1	0.47376	1	1	1	0.17558	1	0.66212	1	0.79311	1	0.10363	1	0.97457	1	0.88519	1
16Q GAIN MUTATION ANALYSIS	83 (18%)	367	0.35078	1	0.39283	1	0.85931	1	0.80988	1	0.70938	1	0.85204	1	0.71571	1	0.31074	1	0.44898	1	1	1	0.14726	1	0.61731	1	0.6052	1
17P GAIN MUTATION ANALYSIS	74 (16%)	376	0.23137	1	0.017382	1	0.52524	1	0.7111	1	0.12237	1	0.2119	1	0.029912	1	0.66634	1	0.26328	1	0.031443	1	0.00022751	0.237	0.39102	1	0.13742	1
17Q GAIN MUTATION ANALYSIS	170 (38%)	280	0.87717	1	0.041272	1	0.22301	1	0.27334	1	0.38685	1	0.54336	1	0.84543	1	0.1973	1	0.12968	1	0.48974	1	0.046272	1	0.90654	1	0.01825	1
18P GAIN MUTATION ANALYSIS	87 (19%)	363	0.59659	1	0.58104	1	0.52175	1	0.90435	1	0.92195	1	0.75615	1	0.18821	1	0.676	1	0.58608	1	0.77732	1	0.009435	1	0.43475	1	0.1848	1
18Q GAIN MUTATION ANALYSIS	57 (13%)	393	0.77662	1	0.08251	1	0.80343	1	0.95955	1	0.72994	1	0.6033	1	0.32184	1	0.23179	1	0.49236	1	1	1	0.024177	1	0.46681	1	0.01088	1
19P GAIN MUTATION ANALYSIS	28 (6%)	422	0.18236	1	0.42015	1	0.67075	1	0.10625	1	0.64391	1	0.40499	1	0.69979	1	0.68057	1	0.0052743	1	1	1	0.14313	1	0.78966	1	0.66157	1
19Q GAIN MUTATION ANALYSIS	65 (14%)	385	0.77091	1	0.68361	1	0.66031	1	0.04909	1	0.7515	1	0.8435	1	0.043073	1	0.2307	1	0.312	1	0.33363	1	0.06423	1	0.91365	1	0.88487	1
20P GAIN MUTATION ANALYSIS	147 (33%)	303	0.41652	1	0.85079	1	0.1235	1	0.29296	1	0.27238	1	0.13656	1	0.84087	1	0.20101	1	0.23418	1	1	1	0.080236	1	0.092122	1	0.69329	1
20Q GAIN MUTATION ANALYSIS	169 (38%)	281	0.38724	1	0.10401	1	0.34363	1	0.31869	1	0.83083	1	0.29709	1	0.37975	1	0.047741	1	0.10229	1	0.34489	1	0.003093	1	0.62362	1	0.89201	1
21Q GAIN MUTATION ANALYSIS	86 (19%)	364	0.069918	1	0.4475	1	0.50259	1	0.8442	1	0.016026	1	0.89628	1	0.11836	1	0.45384	1	0.37552	1	0.77779	1	0.56802	1	0.64354	1	0.73369	1
22Q GAIN MUTATION ANALYSIS	52 (12%)	398	0.071907	1	0.40869	1	0.57732	1	0.30583	1	0.21667	1	0.42947	1	0.24128	1	0.90252	1	0.41813	1	0.49322	1	0.81893	1	0.34544	1	0.52561	1
XQ GAIN MUTATION ANALYSIS	71 (16%)	379	0.30098	1	0.44977	1	0.69801	1	0.8413	1	0.6569	1	0.77794	1	0.30094	1	0.58236	1	0.47183	1	1	1	0.3586	1	0.52383	1	0.48028	1
1P LOSS MUTATION ANALYSIS	69 (15%)	381	0.10402	1	0.50162	1	0.025305	1	0.34736	1	0.0035774	1	0.40871	1	0.29618	1	0.75168	1	0.35954	1	0.21045	1	0.50619	1	0.87189	1	0.76011	1
1Q LOSS MUTATION ANALYSIS	26 (6%)	424	0.72224	1	0.87142	1	0.037449	1	0.89263	1	0.10418	1	0.2543	1	0.69164	1	0.21566	1	0.55727	1	0.10125	1	0.044461	1	0.47172	1	1	1
2P LOSS MUTATION ANALYSIS	24 (5%)	426	0.3915	1	0.52329	1	0.00055063	0.572	0.79123	1	0.4325	1	0.97026	1	0.67981	1	0.98519	1	0.38271	1	0.61546	1	0.96409	1	0.77605	1	0.37216	1
2Q LOSS MUTATION ANALYSIS	24 (5%)	426	0.21929	1	0.77881	1	0.37285	1	0.88661	1	0.71172	1	0.6355	1	0.40819	1	0.73656	1	0.098307	1	0.61546	1	0.013201	1	0.83322	1	0.78141	1
3P LOSS MUTATION ANALYSIS	190 (42%)	260	0.17059	1	0.6193	1	0.42847	1	0.017489	1	0.22695	1	0.73243	1	0.77418	1	0.36702	1	0.38705	1	1	1	0.26986	1	0.07831	1	0.20338	1
3Q LOSS MUTATION ANALYSIS	130 (29%)	320	0.16375	1	0.5202	1	0.49761	1	0.50624	1	0.064924	1	0.2952	1	1	1	0.61203	1	0.63616	1	0.45675	1	0.18993	1	0.10185	1	0.38274	1
4P LOSS MUTATION ANALYSIS	104 (23%)	346	0.45932	1	0.25116	1	0.60491	1	0.98943	1	0.19988	1	0.83992	1	0.91075	1	0.21192	1	0.43064	1	0.42555	1	0.27145	1	0.051451	1	0.35042	1
4Q LOSS MUTATION ANALYSIS	118 (26%)	332	0.60757	1	0.24392	1	0.095024	1	0.75307	1	0.0041949	1	0.71942	1	0.82986	1	0.1064	1	0.40034	1	0.43433	1	0.26816	1	0.22047	1	0.24359	1
5P LOSS MUTATION ANALYSIS	35 (8%)	415	0.40179	1	0.15523	1	0.78509	1	0.48398	1	0.68292	1	0.3538	1	0.11168	1	0.077034	1	0.13507	1	1	1	0.32277	1	0.010799	1	0.61383	1
5Q LOSS MUTATION ANALYSIS	126 (28%)	324	0.095576	1	0.01006	1	0.88854	1	0.98849	1	0.66048	1	0.91106	1	0.0736	1	0.52901	1	0.30661	1	0.61072	1	0.062504	1	0.72187	1	0.04395	1
6P LOSS MUTATION ANALYSIS	90 (20%)	360	0.073065	1	0.68197	1	0.40599	1	0.29793	1	0.80014	1	0.89592	1	0.34452	1	0.038402	1	0.97584	1	0.56913	1	0.11893	1	0.33855	1	1	1
6Q LOSS MUTATION ANALYSIS	192 (43%)	258	0.99379	1	0.13617	1	0.80671	1	0.58779	1	0.55677	1	0.82164	1	0.44499	1	0.09994	1	0.84545	1	0.82177	1	0.26334	1	0.032395	1	0.87783	1
7P LOSS MUTATION ANALYSIS	30 (7%)	420	0.83088	1	0.90842	1	0.98731	1	0.78852	1	0.6721	1	0.77826	1	0.25927	1	0.93088	1	0.43095	1	0.63505	1	0.97672	1	0.93048	1	0.44757	1
7Q LOSS MUTATION ANALYSIS	34 (8%)	416	0.42958	1	0.051436	1	0.87564	1	0.98636	1	0.54537	1	0.47555	1	0.85921	1	0.28387	1	0.30577	1	1	1	0.78359	1	0.48778	1	0.7013	1
8P LOSS MUTATION ANALYSIS	171 (38%)	279	0.89168	1	0.95617	1	0.90438	1	0.68802	1	0.95766	1	0.43525	1	0.052195	1	0.55895	1	0.032363	1	0.10291	1	0.25167	1	0.80919	1	0.2796	1
8Q LOSS MUTATION ANALYSIS	45 (10%)	405	0.61674	1	0.93338	1	0.12645	1	0.76919	1	0.085373	1	0.05247	1	0.15639	1	0.27443	1	0.098317	1	0.70829	1	0.39253	1	0.82718	1	1	1
9P LOSS MUTATION ANALYSIS	229 (51%)	221	0.11454	1	0.18014	1	0.63137	1	0.98758	1	0.11412	1	0.4912	1	0.059008	1	0.38062	1	0.64743	1	0.65164	1	0.38304	1	0.54726	1	0.77754	1
9Q LOSS MUTATION ANALYSIS	213 (47%)	237	0.63622	1	0.89698	1	0.89012	1	0.37264	1	0.5182	1	0.72393	1	0.7772	1	0.61519	1	0.24797	1	0.36005	1	0.080261	1	0.83895	1	0.76671	1
10P LOSS MUTATION ANALYSIS	95 (21%)	355	0.62826	1	0.68391	1	0.65653	1	0.16101	1	0.44977	1	0.94262	1	0.0036345	1	0.57592	1	0.037239	1	0.27236	1	0.28445	1	0.37762	1	0.74485	1
10Q LOSS MUTATION ANALYSIS	112 (25%)	338	0.32777	1	0.71291	1	0.52158	1	0.19709	1	0.21027	1	0.79899	1	0.063099	1	0.57592	1	0.012188	1	0.18278	1	0.062887	1	0.14994	1	0.74218	1
11P LOSS MUTATION ANALYSIS	99 (22%)	351	0.88941	1	0.069122	1	0.36597	1	0.65511	1	0.62516	1	0.38969	1	0.001359	1	0.57608	1	0.70003	1	0.58594	1	0.63307	1	0.15669	1	0.67252	1
11Q LOSS MUTATION ANALYSIS	78 (17%)	372	0.45704	1	0.9939	1	0.49272	1	0.95555	1	0.83981	1	0.48094	1	0.0038818	1	0.60967	1	0.88506	1	0.54931	1	0.82822	1	0.37587	1	0.87989	1
12P LOSS MUTATION ANALYSIS	92 (20%)	358	0.15039	1	0.4024	1	0.63833	1	0.80264	1	0.91102	1	0.24471	1	0.01408	1	0.20996	1	0.70901	1	0.39273	1	0.21747	1	0.50998	1	0.90445	1
12Q LOSS MUTATION ANALYSIS	77 (17%)	373	0.11867	1	0.64734	1	0.54155	1	0.47632	1	0.19542	1	0.13254	1	0.0083788	1	0.56128	1	0.44725	1	0.22218	1	0.22631	1	0.73185	1	0.79678	1
13Q LOSS MUTATION ANALYSIS	213 (47%)	237	0.869	1	0.19271	1	0.82654	1	0.54421	1	0.71282	1	0.34999	1	0.70494	1	0.84815	1	0.3251	1	0.64803	1	0.09081	1	0.20453	1	0.54612	1
14Q LOSS MUTATION ANALYSIS	101 (22%)	349	0.58677	1	0.40491	1	0.51557	1	0.48156	1	0.14686	1	0.65239	1	0.49701	1	0.31683	1	0.90936	1	1	1	0.16008	1	0.45147	1	0.2828	1
15Q LOSS MUTATION ANALYSIS	210 (47%)	240	0.74399	1	0.0046825	1	0.53273	1	0.92832	1	0.93072	1	0.76265	1	0.57101	1	0.033672	1	0.008657	1	0.821	1	0.17393	1	0.22187	1	0.90664	1
16P LOSS MUTATION ANALYSIS	100 (22%)	350	0.29555	1	0.76942	1	0.16075	1	0.62513	1	0.076899	1	0.35943	1	0.42663	1	0.96737	1	0.83609	1	0.78388	1	0.73448	1	0.79678	1	0.60231	1
16Q LOSS MUTATION ANALYSIS	128 (28%)	322	0.73507	1	0.32773	1	0.5993	1	0.96536	1	0.33017	1	0.62432	1	0.46354	1	0.26423	1	0.3946	1	1	1	0.39161	1	0.86215	1	0.24764	1
17P LOSS MUTATION ANALYSIS	190 (42%)	260	0.7055	1	0.12634	1	0.45252	1	0.36599	1	0.73752	1	0.46835	1	0.068998	1	0.58906	1	0.55531	1	0.061324	1	0.037591	1	0.010999	1	0.75599	1
17Q LOSS MUTATION ANALYSIS	50 (11%)	400	0.67637	1	0.70423	1	0.3698	1	0.16503	1	0.42644	1	0.97093	1	0.55079	1	0.9812	1	0.89259	1	0.71277	1	0.73812	1	0.081597	1	0.6491	1
18P LOSS MUTATION ANALYSIS	152 (34%)	298	0.38922	1	0.034802	1	0.04293	1	0.59926	1	0.16443	1	0.16127	1	0.0050881	1	0.28205	1	0.55684	1	0.47528	1	0.036995	1	0.0019184	1	0.078411	1
18Q LOSS MUTATION ANALYSIS	190 (42%)	260	0.047951	1	0.39239	1	0.019653	1	0.30973	1	0.060496	1	0.40286	1	0.068998	1	0.8493	1	0.57365	1	0.35511	1	0.17242	1	0.093488	1	0.0036751	1
19P LOSS MUTATION ANALYSIS	221 (49%)	229	0.023867	1	0.15459	1	0.097462	1	0.41503	1	0.27756	1	0.061497	1	0.010622	1	0.53961	1	0.60001	1	0.25386	1	0.96675	1	0.59334	1	0.23609	1
19Q LOSS MUTATION ANALYSIS	142 (32%)	308	0.054683	1	0.19285	1	0.14515	1	0.098764	1	0.3982	1	0.019953	1	0.30919	1	0.89522	1	0.73083	1	0.62787	1	0.50907	1	0.96608	1	0.27228	1
20P LOSS MUTATION ANALYSIS	109 (24%)	341	0.20551	1	0.58498	1	0.37019	1	0.32888	1	0.11768	1	0.3293	1	0.91245	1	0.32771	1	0.25732	1	0.79363	1	0.32865	1	0.24251	1	0.58058	1
20Q LOSS MUTATION ANALYSIS	68 (15%)	382	0.4638	1	0.2262	1	0.13616	1	0.41696	1	0.3734	1	0.3052	1	1	1	0.00089538	0.929	0.057298	1	0.75166	1	0.83273	1	0.94797	1	0.66191	1
21Q LOSS MUTATION ANALYSIS	143 (32%)	307	0.54411	1	0.83656	1	0.57462	1	0.80782	1	0.60935	1	0.59633	1	0.053565	1	0.85354	1	0.17107	1	0.22124	1	0.16456	1	0.30932	1	0.50991	1
22Q LOSS MUTATION ANALYSIS	190 (42%)	260	0.64561	1	0.0014199	1	0.5403	1	1	1	0.8462	1	0.24765	1	0.055913	1	0.052117	1	0.31886	1	0.8201	1	0.78622	1	0.0045015	1	0.75238	1
XQ LOSS MUTATION ANALYSIS	61 (14%)	389	0.96793	1	0.74727	1	0.2876	1	0.8053	1	0.83835	1	0.39228	1	0.21421	1	0.92777	1	0.13258	1	0.16995	1	0.8039	1	0.28401	1	0.77167	1
