name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-A4-7286-01A-11D-2136-08	48	45	3	33	6.250000e-02	0	coding only	34834024	11	31	3.157832e-07	8.899345e-07
TCGA-A4-7287-01A-11D-2136-08	52	51	1	39	1.923077e-02	0	coding only	34834024	12	38	3.444908e-07	1.090887e-06
TCGA-A4-7288-01A-11D-2136-08	81	80	1	64	1.234568e-02	0	coding only	34834024	15	62	4.306135e-07	1.779869e-06
TCGA-A4-7583-01A-11D-2136-08	72	69	3	55	4.166667e-02	0	coding only	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-A4-7584-01A-11D-2136-08	83	82	1	64	1.204819e-02	0	coding only	34834024	16	63	4.593210e-07	1.808577e-06
TCGA-A4-7585-01A-11D-2136-08	100	99	1	83	1.000000e-02	0	coding only	34834024	14	80	4.019059e-07	2.296605e-06
TCGA-A4-7732-01A-11D-2136-08	72	70	2	61	2.777778e-02	0	coding only	34834024	8	54	2.296605e-07	1.550208e-06
TCGA-A4-7734-01A-11D-2136-08	61	60	1	49	1.639344e-02	0	coding only	34834024	11	48	3.157832e-07	1.377963e-06
TCGA-A4-7828-01A-11D-2136-08	42	40	2	34	4.761905e-02	0	coding only	34834024	6	32	1.722454e-07	9.186421e-07
TCGA-A4-7915-01A-11D-2201-08	34	34	0	28	0	0	coding only	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-A4-7996-01A-11D-2201-08	104	101	3	77	2.884615e-02	0	coding only	34834024	23	75	6.602740e-07	2.153067e-06
TCGA-A4-7997-01A-11D-2201-08	84	82	2	62	2.380952e-02	0	coding only	34834024	20	61	5.741513e-07	1.751161e-06
TCGA-A4-8098-01A-11D-2396-08	109	107	2	85	1.834862e-02	0	coding only	34834024	20	79	5.741513e-07	2.267898e-06
TCGA-A4-8310-01A-11D-2396-08	90	87	3	66	3.333333e-02	0	coding only	34834024	20	62	5.741513e-07	1.779869e-06
TCGA-A4-8311-01A-11D-2396-08	67	64	3	41	4.477612e-02	0	coding only	34834024	21	41	6.028589e-07	1.177010e-06
TCGA-A4-8312-01A-11D-2396-08	18	18	0	13	0	0	coding only	34834024	5	12	1.435378e-07	3.444908e-07
TCGA-A4-8516-01A-11D-2396-08	121	119	2	93	1.652893e-02	0	coding only	34834024	26	91	7.463967e-07	2.612388e-06
TCGA-A4-8518-01A-11D-2396-08	21	19	2	14	9.523810e-02	0	coding only	34834024	5	10	1.435378e-07	2.870756e-07
TCGA-A4-8630-01A-11D-2396-08	67	62	5	50	7.462687e-02	0	coding only	34834024	11	47	3.157832e-07	1.349256e-06
TCGA-AL-3466-01A-01D-1252-08	53	51	2	42	3.773585e-02	0	coding only	34834024	6	38	1.722454e-07	1.090887e-06
TCGA-AL-3467-01A-01D-1252-08	34	34	0	27	0	0	coding only	34834024	7	24	2.009530e-07	6.889816e-07
TCGA-AL-3468-01A-01D-1252-08	124	122	2	94	1.612903e-02	0	coding only	34834024	25	90	7.176891e-07	2.583681e-06
TCGA-AL-3472-01A-01D-1252-08	66	64	2	52	3.030303e-02	0	coding only	34834024	11	50	3.157832e-07	1.435378e-06
TCGA-AL-3473-01A-01D-1252-08	79	76	3	65	3.797468e-02	0	coding only	34834024	11	63	3.157832e-07	1.808577e-06
TCGA-AL-7173-01A-11D-2136-08	71	70	1	57	1.408451e-02	0	coding only	34834024	11	55	3.157832e-07	1.578916e-06
TCGA-B1-5398-01A-02D-1589-08	130	129	1	94	7.692308e-03	0	coding only	34834024	33	93	9.473496e-07	2.669804e-06
TCGA-B3-3925-01A-01D-1252-08	100	97	3	74	3.000000e-02	0	coding only	34834024	21	70	6.028589e-07	2.009530e-06
TCGA-B3-3925-01A-01D-1458-08	95	87	8	67	8.421053e-02	0	coding only	34834024	19	61	5.454437e-07	1.751161e-06
TCGA-B3-3926-01A-01D-1252-08	17	16	1	15	5.882353e-02	0	coding only	34834024	1	15	2.870756e-08	4.306135e-07
TCGA-B3-4103-01A-01D-1252-08	88	84	4	67	4.545455e-02	0	coding only	34834024	16	67	4.593210e-07	1.923407e-06
TCGA-B3-4103-01A-01D-1458-08	78	76	2	59	2.564103e-02	0	coding only	34834024	17	59	4.880286e-07	1.693746e-06
TCGA-B3-4104-01A-01D-1252-08	131	127	4	98	3.053435e-02	0	coding only	34834024	29	97	8.325194e-07	2.784634e-06
TCGA-B3-4104-01A-01D-1458-08	126	123	3	95	2.380952e-02	0	coding only	34834024	28	94	8.038118e-07	2.698511e-06
TCGA-B3-8121-01A-21D-2396-08	46	42	4	33	8.695652e-02	0	coding only	34834024	8	32	2.296605e-07	9.186421e-07
TCGA-B9-4113-01A-01D-1252-08	81	80	1	62	1.234568e-02	0	coding only	34834024	18	61	5.167362e-07	1.751161e-06
TCGA-B9-4114-01A-01D-1252-08	94	92	2	72	2.127660e-02	0	coding only	34834024	20	71	5.741513e-07	2.038237e-06
TCGA-B9-4115-01A-01D-1252-08	77	75	2	53	2.597403e-02	0	coding only	34834024	20	50	5.741513e-07	1.435378e-06
TCGA-B9-4116-01A-01D-1252-08	105	104	1	82	9.523810e-03	0	coding only	34834024	21	81	6.028589e-07	2.325313e-06
TCGA-B9-4117-01A-01D-1252-08	58	57	1	46	1.724138e-02	0	coding only	34834024	10	45	2.870756e-07	1.291840e-06
TCGA-B9-4617-01A-01D-1252-08	64	59	5	49	7.812500e-02	0	coding only	34834024	7	47	2.009530e-07	1.349256e-06
TCGA-B9-5155-01A-01D-1589-08	138	135	3	102	2.173913e-02	0	coding only	34834024	30	96	8.612269e-07	2.755926e-06
TCGA-B9-5156-01A-01D-1589-08	108	107	1	81	9.259259e-03	0	coding only	34834024	24	77	6.889816e-07	2.210482e-06
TCGA-B9-7268-01A-11D-2136-08	67	60	7	41	1.044776e-01	0	coding only	34834024	18	38	5.167362e-07	1.090887e-06
TCGA-BQ-5875-01A-11D-1589-08	88	84	4	66	4.545455e-02	0	coding only	34834024	18	65	5.167362e-07	1.865992e-06
TCGA-BQ-5876-01A-11D-1589-08	99	95	4	78	4.040404e-02	0	coding only	34834024	16	73	4.593210e-07	2.095652e-06
TCGA-BQ-5877-01A-11D-1589-08	88	86	2	73	2.272727e-02	0	coding only	34834024	13	70	3.731983e-07	2.009530e-06
TCGA-BQ-5878-01A-11D-1589-08	125	123	2	90	1.600000e-02	0	coding only	34834024	30	86	8.612269e-07	2.468851e-06
TCGA-BQ-5879-01A-11D-1589-08	35	34	1	24	2.857143e-02	0	coding only	34834024	9	23	2.583681e-07	6.602740e-07
TCGA-BQ-5880-01A-11D-1589-08	65	64	1	52	1.538462e-02	0	coding only	34834024	11	50	3.157832e-07	1.435378e-06
TCGA-BQ-5881-01A-11D-1589-08	48	47	1	39	2.083333e-02	0	coding only	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-BQ-5882-01A-11D-1589-08	82	78	4	59	4.878049e-02	0	coding only	34834024	19	57	5.454437e-07	1.636331e-06
TCGA-BQ-5883-01A-11D-1589-08	41	38	3	28	7.317073e-02	0	coding only	34834024	7	26	2.009530e-07	7.463967e-07
TCGA-BQ-5884-01A-11D-1589-08	60	60	0	48	0	0	coding only	34834024	11	45	3.157832e-07	1.291840e-06
TCGA-BQ-5885-01A-11D-1589-08	126	126	0	103	0	0	coding only	34834024	23	99	6.602740e-07	2.842049e-06
TCGA-BQ-5886-01A-11D-1589-08	71	71	0	58	0	0	coding only	34834024	12	58	3.444908e-07	1.665039e-06
TCGA-BQ-5887-01A-11D-1961-08	33	29	4	22	1.212121e-01	0	coding only	34834024	7	17	2.009530e-07	4.880286e-07
TCGA-BQ-5888-01A-11D-1589-08	26	25	1	17	3.846154e-02	0	coding only	34834024	7	17	2.009530e-07	4.880286e-07
TCGA-BQ-5889-01A-11D-1589-08	63	62	1	51	1.587302e-02	0	coding only	34834024	11	49	3.157832e-07	1.406671e-06
TCGA-BQ-5890-01A-11D-1589-08	97	95	2	74	2.061856e-02	0	coding only	34834024	20	72	5.741513e-07	2.066945e-06
TCGA-BQ-5891-01A-11D-1589-08	42	41	1	27	2.380952e-02	0	coding only	34834024	14	24	4.019059e-07	6.889816e-07
TCGA-BQ-5892-01A-11D-1589-08	87	84	3	71	3.448276e-02	0	coding only	34834024	11	65	3.157832e-07	1.865992e-06
TCGA-BQ-5893-01A-11D-1589-08	61	58	3	41	4.918033e-02	0	coding only	34834024	16	38	4.593210e-07	1.090887e-06
TCGA-BQ-5894-01A-11D-1589-08	38	37	1	32	2.631579e-02	0	coding only	34834024	5	31	1.435378e-07	8.899345e-07
TCGA-BQ-7044-01A-11D-1961-08	92	90	2	71	2.173913e-02	0	coding only	34834024	19	66	5.454437e-07	1.894699e-06
TCGA-BQ-7045-01A-31D-1961-08	95	92	3	68	3.157895e-02	0	coding only	34834024	22	68	6.315664e-07	1.952114e-06
TCGA-BQ-7046-01A-11D-1961-08	52	48	4	38	7.692308e-02	0	coding only	34834024	10	36	2.870756e-07	1.033472e-06
TCGA-BQ-7048-01A-11D-1961-08	89	89	0	69	0	0	coding only	34834024	20	68	5.741513e-07	1.952114e-06
TCGA-BQ-7049-01A-11D-1961-08	29	27	2	20	6.896552e-02	0	coding only	34834024	7	20	2.009530e-07	5.741513e-07
TCGA-BQ-7050-01A-11D-1961-08	26	26	0	22	0	0	coding only	34834024	4	22	1.148303e-07	6.315664e-07
TCGA-BQ-7051-01A-12D-1961-08	111	108	3	79	2.702703e-02	0	coding only	34834024	28	76	8.038118e-07	2.181775e-06
TCGA-BQ-7053-01A-11D-1961-08	67	64	3	52	4.477612e-02	0	coding only	34834024	12	48	3.444908e-07	1.377963e-06
TCGA-BQ-7055-01A-11D-1961-08	15	12	3	8	2.000000e-01	0	coding only	34834024	3	8	8.612269e-08	2.296605e-07
TCGA-BQ-7056-01A-11D-1961-08	44	42	2	32	4.545455e-02	0	coding only	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-BQ-7058-01A-11D-1961-08	89	88	1	73	1.123596e-02	0	coding only	34834024	14	68	4.019059e-07	1.952114e-06
TCGA-BQ-7059-01A-11D-1961-08	82	81	1	60	1.219512e-02	0	coding only	34834024	21	59	6.028589e-07	1.693746e-06
TCGA-BQ-7060-01A-11D-1961-08	42	41	1	32	2.380952e-02	0	coding only	34834024	9	30	2.583681e-07	8.612269e-07
TCGA-BQ-7061-01A-11D-1961-08	95	93	2	74	2.105263e-02	0	coding only	34834024	19	73	5.454437e-07	2.095652e-06
TCGA-BQ-7062-01A-11D-1961-08	47	43	4	35	8.510638e-02	0	coding only	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-DW-5560-01A-01D-1589-08	38	37	1	28	2.631579e-02	0	coding only	34834024	9	23	2.583681e-07	6.602740e-07
TCGA-DW-5561-01A-01D-1589-08	51	51	0	39	0	0	coding only	34834024	11	35	3.157832e-07	1.004765e-06
TCGA-DW-7834-01A-11D-2136-08	72	72	0	54	0	0	coding only	34834024	18	52	5.167362e-07	1.492793e-06
TCGA-DW-7837-01A-11D-2136-08	35	35	0	27	0	0	coding only	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-DW-7838-01A-11D-2136-08	104	104	0	80	0	0	coding only	34834024	23	75	6.602740e-07	2.153067e-06
TCGA-DW-7839-01A-11D-2136-08	53	51	2	45	3.773585e-02	0	coding only	34834024	4	43	1.148303e-07	1.234425e-06
TCGA-DW-7840-01A-11D-2136-08	104	101	3	80	2.884615e-02	0	coding only	34834024	20	76	5.741513e-07	2.181775e-06
TCGA-DW-7841-01A-11D-2136-08	61	60	1	47	1.639344e-02	0	coding only	34834024	12	44	3.444908e-07	1.263133e-06
TCGA-DW-7842-01A-11D-2136-08	32	31	1	27	3.125000e-02	0	coding only	34834024	4	26	1.148303e-07	7.463967e-07
TCGA-DZ-6131-01A-11D-1961-08	34	33	1	22	2.941176e-02	0	coding only	34834024	11	22	3.157832e-07	6.315664e-07
TCGA-DZ-6132-01A-11D-1961-08	130	129	1	112	7.692308e-03	0	coding only	34834024	17	108	4.880286e-07	3.100417e-06
TCGA-DZ-6133-01A-11D-1961-08	117	115	2	90	1.709402e-02	0	coding only	34834024	24	86	6.889816e-07	2.468851e-06
TCGA-DZ-6134-01A-11D-1961-08	61	59	2	43	3.278689e-02	0	coding only	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-DZ-6135-01A-11D-1961-08	43	38	5	27	1.162791e-01	0	coding only	34834024	11	24	3.157832e-07	6.889816e-07
TCGA-EV-5901-01A-11D-1589-08	51	50	1	39	1.960784e-02	0	coding only	34834024	10	37	2.870756e-07	1.062180e-06
TCGA-EV-5902-01A-11D-1589-08	100	100	0	81	0	0	coding only	34834024	19	75	5.454437e-07	2.153067e-06
TCGA-EV-5903-01A-11D-1589-08	128	126	2	100	1.562500e-02	0	coding only	34834024	22	91	6.315664e-07	2.612388e-06
TCGA-G7-6789-01A-11D-1961-08	30	29	1	21	3.333333e-02	0	coding only	34834024	8	19	2.296605e-07	5.454437e-07
TCGA-G7-6790-01A-11D-1961-08	78	77	1	59	1.282051e-02	0	coding only	34834024	17	58	4.880286e-07	1.665039e-06
TCGA-G7-6792-01A-21D-1961-08	44	43	1	29	2.272727e-02	0	coding only	34834024	13	28	3.731983e-07	8.038118e-07
TCGA-G7-6793-01A-11D-1961-08	40	40	0	32	0	0	coding only	34834024	8	28	2.296605e-07	8.038118e-07
TCGA-G7-6795-01A-11D-1961-08	79	78	1	58	1.265823e-02	0	coding only	34834024	20	55	5.741513e-07	1.578916e-06
TCGA-G7-6796-01A-11D-1961-08	63	61	2	47	3.174603e-02	0	coding only	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-G7-6797-01A-11D-1961-08	75	71	4	56	5.333333e-02	0	coding only	34834024	15	54	4.306135e-07	1.550208e-06
TCGA-G7-7501-01A-11D-2201-08	49	47	2	36	4.081633e-02	0	coding only	34834024	8	34	2.296605e-07	9.760572e-07
TCGA-G7-7502-01A-11D-2201-08	81	79	2	59	2.469136e-02	0	coding only	34834024	20	57	5.741513e-07	1.636331e-06
TCGA-GL-6846-01A-11D-1961-08	81	79	2	60	2.469136e-02	0	coding only	34834024	18	59	5.167362e-07	1.693746e-06
TCGA-GL-7773-01A-11D-2136-08	138	136	2	107	1.449275e-02	0	coding only	34834024	28	102	8.038118e-07	2.928172e-06
TCGA-GL-7966-01A-11D-2201-08	53	49	4	33	7.547170e-02	0	coding only	34834024	16	31	4.593210e-07	8.899345e-07
TCGA-GL-8500-01A-11D-2396-08	101	96	5	75	4.950495e-02	1	exome+100bp flanks	34834024	20	70	5.741513e-07	2.009530e-06
TCGA-HE-7128-01A-11D-1961-08	44	43	1	36	2.272727e-02	0	coding only	34834024	6	34	1.722454e-07	9.760572e-07
TCGA-HE-7129-01A-11D-1961-08	65	63	2	43	3.076923e-02	0	coding only	34834024	17	41	4.880286e-07	1.177010e-06
TCGA-HE-7130-01A-11D-1961-08	219	216	3	173	1.369863e-02	0	coding only	34834024	42	167	1.205718e-06	4.794163e-06
TCGA-IZ-8195-01A-31D-2396-08	83	80	3	59	3.614458e-02	0	coding only	34834024	21	55	6.028589e-07	1.578916e-06
TCGA-IZ-8196-01A-11D-2396-08	115	110	5	86	4.347826e-02	1	exome+100bp flanks	34834024	22	79	6.315664e-07	2.267898e-06
TCGA-J7-6720-01A-11D-2136-08	47	41	6	32	1.276596e-01	0	coding only	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-J7-8537-01A-11D-2396-08	62	60	2	49	3.225806e-02	0	coding only	34834024	9	46	2.583681e-07	1.320548e-06