[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"         "-nVNozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "Time to Death"
[1] "AGE"
[1] "NEOPLASM.DISEASESTAGE"
[1] "PATHOLOGY.T.STAGE"
[1] "PATHOLOGY.N.STAGE"
[1] "PATHOLOGY.M.STAGE"
[1] "GENDER"
[1] "KARNOFSKY.PERFORMANCE.SCORE"
[1] "NUMBERPACKYEARSSMOKED"
[1] "NUMBER.OF.LYMPH.NODES"
[1] "GLEASON_SCORE"
[1] 6
                            Clinical feature             
Time to Death               "Time to Death"              
AGE                         "AGE"                        
NEOPLASM.DISEASESTAGE       "NEOPLASM DISEASESTAGE"      
PATHOLOGY.T.STAGE           "PATHOLOGY T STAGE"          
PATHOLOGY.N.STAGE           "PATHOLOGY N STAGE"          
PATHOLOGY.M.STAGE           "PATHOLOGY M STAGE"          
GENDER                      "GENDER"                     
KARNOFSKY.PERFORMANCE.SCORE "KARNOFSKY PERFORMANCE SCORE"
NUMBERPACKYEARSSMOKED       "NUMBERPACKYEARSSMOKED"      
NUMBER.OF.LYMPH.NODES       "NUMBER OF LYMPH NODES"      
GLEASON_SCORE               "GLEASON_SCORE"              
                            Statistical test            Significant genes
Time to Death               "Cox regression test"       "N=0"            
AGE                         "Spearman correlation test" "N=0"            
NEOPLASM.DISEASESTAGE       "ANOVA test"                "N=19"           
PATHOLOGY.T.STAGE           "Spearman correlation test" "N=9"            
PATHOLOGY.N.STAGE           "Spearman correlation test" "N=2"            
PATHOLOGY.M.STAGE           "ANOVA test"                "N=1"            
GENDER                      "t test"                    "N=16"           
KARNOFSKY.PERFORMANCE.SCORE "Spearman correlation test" "N=1"            
NUMBERPACKYEARSSMOKED       "Spearman correlation test" "N=0"            
NUMBER.OF.LYMPH.NODES       "Spearman correlation test" "N=4"            
GLEASON_SCORE               "Spearman correlation test" "N=0"            
                            Associated with               
Time to Death               " "                           
AGE                         " "                           
NEOPLASM.DISEASESTAGE       " "                           
PATHOLOGY.T.STAGE           "higher stage"                
PATHOLOGY.N.STAGE           "higher stage"                
PATHOLOGY.M.STAGE           " "                           
GENDER                      "male"                        
KARNOFSKY.PERFORMANCE.SCORE "higher score"                
NUMBERPACKYEARSSMOKED       " "                           
NUMBER.OF.LYMPH.NODES       "higher number.of.lymph.nodes"
GLEASON_SCORE               " "                           
                            &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
Time to Death               " "                                                                                       
AGE                         " "                                                                                       
NEOPLASM.DISEASESTAGE       " "                                                                                       
PATHOLOGY.T.STAGE           "N=9"                                                                                     
PATHOLOGY.N.STAGE           "N=2"                                                                                     
PATHOLOGY.M.STAGE           " "                                                                                       
GENDER                      "N=11"                                                                                    
KARNOFSKY.PERFORMANCE.SCORE "N=0"                                                                                     
NUMBERPACKYEARSSMOKED       " "                                                                                       
NUMBER.OF.LYMPH.NODES       "N=3"                                                                                     
GLEASON_SCORE               " "                                                                                       
                            Associated with                    
Time to Death               " "                           " "  
AGE                         " "                           " "  
NEOPLASM.DISEASESTAGE       " "                           " "  
PATHOLOGY.T.STAGE           "lower stage"                 "N=0"
PATHOLOGY.N.STAGE           "lower stage"                 "N=0"
PATHOLOGY.M.STAGE           " "                           " "  
GENDER                      "female"                      "N=5"
KARNOFSKY.PERFORMANCE.SCORE "lower score"                 "N=1"
NUMBERPACKYEARSSMOKED       " "                           " "  
NUMBER.OF.LYMPH.NODES       "lower number.of.lymph.nodes" "N=1"
GLEASON_SCORE               " "                           " "  
