
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/ESCA-TP/6159678/transformed.cor.cli.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/ESCA-TP/6159635/ESCA-TP.transferedmergedcluster.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ONLYSIG", "-oT=ESCA-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=ESCA-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/ESCA-TP/6159635/ESCA-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/ESCA-TP/6159678/transformed.cor.cli.txt"

nPatients in clinical file=73, in cluster file=73, common to both=73
[1] 40 73
[1] "1P MUTATION ANALYSIS"
[1] 3
  1P MUTATED 1P WILD-TYPE 
          23           50 
  1P MUTATED 1P WILD-TYPE 
          23           50 
[1] "1Q MUTATION ANALYSIS"
[1] 3
  1Q MUTATED 1Q WILD-TYPE 
          36           37 
  1Q MUTATED 1Q WILD-TYPE 
          36           37 
[1] "2P MUTATION ANALYSIS"
[1] 3
  2P MUTATED 2P WILD-TYPE 
          32           41 
  2P MUTATED 2P WILD-TYPE 
          32           41 
[1] "2Q MUTATION ANALYSIS"
[1] 3
  2Q MUTATED 2Q WILD-TYPE 
          27           46 
  2Q MUTATED 2Q WILD-TYPE 
          27           46 
[1] "3P MUTATION ANALYSIS"
[1] 3
  3P MUTATED 3P WILD-TYPE 
          54           19 
  3P MUTATED 3P WILD-TYPE 
          54           19 
[1] "3Q MUTATION ANALYSIS"
[1] 3
  3Q MUTATED 3Q WILD-TYPE 
          46           27 
  3Q MUTATED 3Q WILD-TYPE 
          46           27 
[1] "4P MUTATION ANALYSIS"
[1] 3
  4P MUTATED 4P WILD-TYPE 
          48           25 
  4P MUTATED 4P WILD-TYPE 
          48           25 
[1] "4Q MUTATION ANALYSIS"
[1] 3
  4Q MUTATED 4Q WILD-TYPE 
          40           33 
  4Q MUTATED 4Q WILD-TYPE 
          40           33 
[1] "5P MUTATION ANALYSIS"
[1] 3
  5P MUTATED 5P WILD-TYPE 
          51           22 
  5P MUTATED 5P WILD-TYPE 
          51           22 
[1] "5Q MUTATION ANALYSIS"
[1] 3
  5Q MUTATED 5Q WILD-TYPE 
          42           31 
  5Q MUTATED 5Q WILD-TYPE 
          42           31 
[1] "6P MUTATION ANALYSIS"
[1] 3
  6P MUTATED 6P WILD-TYPE 
          27           46 
  6P MUTATED 6P WILD-TYPE 
          27           46 
[1] "6Q MUTATION ANALYSIS"
[1] 3
  6Q MUTATED 6Q WILD-TYPE 
          24           49 
  6Q MUTATED 6Q WILD-TYPE 
          24           49 
[1] "7P MUTATION ANALYSIS"
[1] 3
  7P MUTATED 7P WILD-TYPE 
          53           20 
  7P MUTATED 7P WILD-TYPE 
          53           20 
[1] "7Q MUTATION ANALYSIS"
[1] 3
  7Q MUTATED 7Q WILD-TYPE 
          44           29 
  7Q MUTATED 7Q WILD-TYPE 
          44           29 
[1] "8P MUTATION ANALYSIS"
[1] 3
  8P MUTATED 8P WILD-TYPE 
          56           17 
  8P MUTATED 8P WILD-TYPE 
          56           17 
[1] "8Q MUTATION ANALYSIS"
[1] 3
  8Q MUTATED 8Q WILD-TYPE 
          51           22 
  8Q MUTATED 8Q WILD-TYPE 
          51           22 
[1] "9P MUTATION ANALYSIS"
[1] 3
  9P MUTATED 9P WILD-TYPE 
          49           24 
  9P MUTATED 9P WILD-TYPE 
          49           24 
[1] "9Q MUTATION ANALYSIS"
[1] 3
  9Q MUTATED 9Q WILD-TYPE 
          40           33 
  9Q MUTATED 9Q WILD-TYPE 
          40           33 
[1] "10P MUTATION ANALYSIS"
[1] 3
  10P MUTATED 10P WILD-TYPE 
           36            37 
  10P MUTATED 10P WILD-TYPE 
           36            37 
[1] "10Q MUTATION ANALYSIS"
[1] 3
  10Q MUTATED 10Q WILD-TYPE 
           35            38 
  10Q MUTATED 10Q WILD-TYPE 
           35            38 
[1] "11P MUTATION ANALYSIS"
[1] 3
  11P MUTATED 11P WILD-TYPE 
           37            36 
  11P MUTATED 11P WILD-TYPE 
           37            36 
[1] "11Q MUTATION ANALYSIS"
[1] 3
  11Q MUTATED 11Q WILD-TYPE 
           40            33 
  11Q MUTATED 11Q WILD-TYPE 
           40            33 
[1] "12P MUTATION ANALYSIS"
[1] 3
  12P MUTATED 12P WILD-TYPE 
           46            27 
  12P MUTATED 12P WILD-TYPE 
           46            27 
[1] "12Q MUTATION ANALYSIS"
[1] 3
  12Q MUTATED 12Q WILD-TYPE 
           33            40 
  12Q MUTATED 12Q WILD-TYPE 
           33            40 
[1] "13Q MUTATION ANALYSIS"
[1] 3
  13Q MUTATED 13Q WILD-TYPE 
           46            27 
  13Q MUTATED 13Q WILD-TYPE 
           46            27 
[1] "14Q MUTATION ANALYSIS"
[1] 3
  14Q MUTATED 14Q WILD-TYPE 
           40            33 
  14Q MUTATED 14Q WILD-TYPE 
           40            33 
[1] "15Q MUTATION ANALYSIS"
[1] 3
  15Q MUTATED 15Q WILD-TYPE 
           32            41 
  15Q MUTATED 15Q WILD-TYPE 
           32            41 
[1] "16P MUTATION ANALYSIS"
[1] 3
  16P MUTATED 16P WILD-TYPE 
           34            39 
  16P MUTATED 16P WILD-TYPE 
           34            39 
[1] "16Q MUTATION ANALYSIS"
[1] 3
  16Q MUTATED 16Q WILD-TYPE 
           32            41 
  16Q MUTATED 16Q WILD-TYPE 
           32            41 
[1] "17P MUTATION ANALYSIS"
[1] 3
  17P MUTATED 17P WILD-TYPE 
           41            32 
  17P MUTATED 17P WILD-TYPE 
           41            32 
[1] "17Q MUTATION ANALYSIS"
[1] 3
  17Q MUTATED 17Q WILD-TYPE 
           29            44 
  17Q MUTATED 17Q WILD-TYPE 
           29            44 
[1] "18P MUTATION ANALYSIS"
[1] 3
  18P MUTATED 18P WILD-TYPE 
           49            24 
  18P MUTATED 18P WILD-TYPE 
           49            24 
[1] "18Q MUTATION ANALYSIS"
[1] 3
  18Q MUTATED 18Q WILD-TYPE 
           49            24 
  18Q MUTATED 18Q WILD-TYPE 
           49            24 
[1] "19P MUTATION ANALYSIS"
[1] 3
  19P MUTATED 19P WILD-TYPE 
           37            36 
  19P MUTATED 19P WILD-TYPE 
           37            36 
[1] "19Q MUTATION ANALYSIS"
[1] 3
  19Q MUTATED 19Q WILD-TYPE 
           36            37 
  19Q MUTATED 19Q WILD-TYPE 
           36            37 
[1] "20P MUTATION ANALYSIS"
[1] 3
  20P MUTATED 20P WILD-TYPE 
           48            25 
  20P MUTATED 20P WILD-TYPE 
           48            25 
[1] "20Q MUTATION ANALYSIS"
[1] 3
  20Q MUTATED 20Q WILD-TYPE 
           45            28 
  20Q MUTATED 20Q WILD-TYPE 
           45            28 
[1] "21Q MUTATION ANALYSIS"
[1] 3
  21Q MUTATED 21Q WILD-TYPE 
           52            21 
  21Q MUTATED 21Q WILD-TYPE 
           52            21 
[1] "22Q MUTATION ANALYSIS"
[1] 3
  22Q MUTATED 22Q WILD-TYPE 
           43            30 
  22Q MUTATED 22Q WILD-TYPE 
           43            30 
[1] "XQ MUTATION ANALYSIS"
[1] 3
  XQ MUTATED XQ WILD-TYPE 
          36           37 
  XQ MUTATED XQ WILD-TYPE 
          36           37 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[5] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 6 rows and 73 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_MATURE_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[5] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 73 columns, 0 survival variables, and 6 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = 1P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED        6     10      7
  1P WILD-TYPE      9     24     17
D1V1, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1          6            9
  CLUS_2         10           24
  CLUS_3          7           17
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED       11      4      8
  1P WILD-TYPE     23     11     16
D1V2, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1         11           23
  CLUS_2          4           11
  CLUS_3          8           16
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED       10      4      9
  1P WILD-TYPE     20     10     19
D1V3, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1         10           20
  CLUS_2          4           10
  CLUS_3          9           19
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED        0      9     14
  1P WILD-TYPE      1     19     29
D1V4, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1          0            1
  CLUS_2          9           19
  CLUS_3         14           29
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P MUTATED        3      6      6      8
  1P WILD-TYPE      9      3     19     18
D1V5, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1          3            9
  CLUS_2          6            3
  CLUS_3          6           19
  CLUS_4          8           18
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED        0      9     14
  1P WILD-TYPE      1     19     29
D1V6, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1          0            1
  CLUS_2          9           19
  CLUS_3         14           29

Clustering(2) Variable = 1Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED       12     14     10
  1Q WILD-TYPE      3     20     14
D2V1, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1         12            3
  CLUS_2         14           20
  CLUS_3         10           14
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED       19      7     10
  1Q WILD-TYPE     15      8     14
D2V2, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1         19           15
  CLUS_2          7            8
  CLUS_3         10           14
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED       18      6     11
  1Q WILD-TYPE     12      8     17
D2V3, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1         18           12
  CLUS_2          6            8
  CLUS_3         11           17
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED        0     11     24
  1Q WILD-TYPE      1     17     19
D2V4, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         11           17
  CLUS_3         24           19
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q MUTATED        4      7     15      9
  1Q WILD-TYPE      8      2     10     17
D2V5, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1          4            8
  CLUS_2          7            2
  CLUS_3         15           10
  CLUS_4          9           17
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED        0     11     24
  1Q WILD-TYPE      1     17     19
D2V6, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         11           17
  CLUS_3         24           19

Clustering(3) Variable = 2P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED        6     12     14
  2P WILD-TYPE      9     22     10
D3V1, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1          6            9
  CLUS_2         12           22
  CLUS_3         14           10
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED       17      6      9
  2P WILD-TYPE     17      9     15
D3V2, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1         17           17
  CLUS_2          6            9
  CLUS_3          9           15
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED       17      4     11
  2P WILD-TYPE     13     10     17
D3V3, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1         17           13
  CLUS_2          4           10
  CLUS_3         11           17
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED        0     11     21
  2P WILD-TYPE      1     17     22
D3V4, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         11           17
  CLUS_3         21           22
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2P MUTATED        2      6     15      9
  2P WILD-TYPE     10      3     10     17
D3V5, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1          2           10
  CLUS_2          6            3
  CLUS_3         15           10
  CLUS_4          9           17
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED        0     11     21
  2P WILD-TYPE      1     17     22
D3V6, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         11           17
  CLUS_3         21           22

Clustering(4) Variable = 2Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED        5     11     11
  2Q WILD-TYPE     10     23     13
D4V1, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1          5           10
  CLUS_2         11           23
  CLUS_3         11           13
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED       14      6      7
  2Q WILD-TYPE     20      9     17
D4V2, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1         14           20
  CLUS_2          6            9
  CLUS_3          7           17
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED       13      5      9
  2Q WILD-TYPE     17      9     19
D4V3, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1         13           17
  CLUS_2          5            9
  CLUS_3          9           19
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED        0      9     18
  2Q WILD-TYPE      1     19     25
D4V4, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2          9           19
  CLUS_3         18           25
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2Q MUTATED        3      5     12      7
  2Q WILD-TYPE      9      4     13     19
D4V5, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1          3            9
  CLUS_2          5            4
  CLUS_3         12           13
  CLUS_4          7           19
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED        0      9     18
  2Q WILD-TYPE      1     19     25
D4V6, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2          9           19
  CLUS_3         18           25

Clustering(5) Variable = 3P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED       13     20     21
  3P WILD-TYPE      2     14      3
D5V1, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1         13            2
  CLUS_2         20           14
  CLUS_3         21            3
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED       30     11     13
  3P WILD-TYPE      4      4     11
D5V2, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1         30            4
  CLUS_2         11            4
  CLUS_3         13           11
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED       28     11     15
  3P WILD-TYPE      2      3     13
D5V3, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1         28            2
  CLUS_2         11            3
  CLUS_3         15           13
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED        0     15     39
  3P WILD-TYPE      1     13      4
D5V4, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         15           13
  CLUS_3         39            4
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P MUTATED       11      7     22     14
  3P WILD-TYPE      1      2      3     12
D5V5, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1         11            1
  CLUS_2          7            2
  CLUS_3         22            3
  CLUS_4         14           12
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED        0     15     39
  3P WILD-TYPE      1     13      4
D5V6, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         15           13
  CLUS_3         39            4

Clustering(6) Variable = 3Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED       13     11     22
  3Q WILD-TYPE      2     23      2
D6V1, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1         13            2
  CLUS_2         11           23
  CLUS_3         22            2
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED       30      7      9
  3Q WILD-TYPE      4      8     15
D6V2, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1         30            4
  CLUS_2          7            8
  CLUS_3          9           15
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED       25     10     10
  3Q WILD-TYPE      5      4     18
D6V3, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1         25            5
  CLUS_2         10            4
  CLUS_3         10           18
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED        0     10     35
  3Q WILD-TYPE      1     18      8
D6V4, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         10           18
  CLUS_3         35            8
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q MUTATED       10      7     19      9
  3Q WILD-TYPE      2      2      6     17
D6V5, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1         10            2
  CLUS_2          7            2
  CLUS_3         19            6
  CLUS_4          9           17
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED        0     10     35
  3Q WILD-TYPE      1     18      8
D6V6, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         10           18
  CLUS_3         35            8

Clustering(7) Variable = 4P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED       13     19     16
  4P WILD-TYPE      2     15      8
D7V1, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1         13            2
  CLUS_2         19           15
  CLUS_3         16            8
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED       24     10     14
  4P WILD-TYPE     10      5     10
D7V2, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1         24           10
  CLUS_2         10            5
  CLUS_3         14           10
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED       22     10     16
  4P WILD-TYPE      8      4     12
D7V3, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1         22            8
  CLUS_2         10            4
  CLUS_3         16           12
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED        0     16     32
  4P WILD-TYPE      1     12     11
D7V4, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         16           12
  CLUS_3         32           11
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P MUTATED        9      6     18     15
  4P WILD-TYPE      3      3      7     11
D7V5, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1          9            3
  CLUS_2          6            3
  CLUS_3         18            7
  CLUS_4         15           11
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED        0     16     32
  4P WILD-TYPE      1     12     11
D7V6, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         16           12
  CLUS_3         32           11

Clustering(8) Variable = 4Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED       13     15     12
  4Q WILD-TYPE      2     19     12
D8V1, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1         13            2
  CLUS_2         15           19
  CLUS_3         12           12
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED       21      7     12
  4Q WILD-TYPE     13      8     12
D8V2, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1         21           13
  CLUS_2          7            8
  CLUS_3         12           12
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED       18      8     14
  4Q WILD-TYPE     12      6     14
D8V3, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1         18           12
  CLUS_2          8            6
  CLUS_3         14           14
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED        0     14     26
  4Q WILD-TYPE      1     14     17
D8V4, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         14           14
  CLUS_3         26           17
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q MUTATED        7      5     15     13
  4Q WILD-TYPE      5      4     10     13
D8V5, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1          7            5
  CLUS_2          5            4
  CLUS_3         15           10
  CLUS_4         13           13
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED        0     14     26
  4Q WILD-TYPE      1     14     17
D8V6, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         14           14
  CLUS_3         26           17

Clustering(9) Variable = 5P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED       11     24     16
  5P WILD-TYPE      4     10      8
D9V1, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1         11            4
  CLUS_2         24           10
  CLUS_3         16            8
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED       25      8     18
  5P WILD-TYPE      9      7      6
D9V2, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1         25            9
  CLUS_2          8            7
  CLUS_3         18            6
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED       23      6     21
  5P WILD-TYPE      7      8      7
D9V3, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1         23            7
  CLUS_2          6            8
  CLUS_3         21            7
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED        0     21     29
  5P WILD-TYPE      1      7     14
D9V4, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         21            7
  CLUS_3         29           14
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P MUTATED        6      8     17     19
  5P WILD-TYPE      6      1      8      7
D9V5, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1          6            6
  CLUS_2          8            1
  CLUS_3         17            8
  CLUS_4         19            7
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED        0     21     29
  5P WILD-TYPE      1      7     14
D9V6, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         21            7
  CLUS_3         29           14

Clustering(10) Variable = 5Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED        8     20     14
  5Q WILD-TYPE      7     14     10
D10V1, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1          8            7
  CLUS_2         20           14
  CLUS_3         14           10
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED       20      6     16
  5Q WILD-TYPE     14      9      8
D10V2, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1         20           14
  CLUS_2          6            9
  CLUS_3         16            8
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED       17      6     19
  5Q WILD-TYPE     13      8      9
D10V3, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1         17           13
  CLUS_2          6            8
  CLUS_3         19            9
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED        0     19     23
  5Q WILD-TYPE      1      9     20
D10V4, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         19            9
  CLUS_3         23           20
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q MUTATED        7      7     11     17
  5Q WILD-TYPE      5      2     14      9
D10V5, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1          7            5
  CLUS_2          7            2
  CLUS_3         11           14
  CLUS_4         17            9
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED        0     19     23
  5Q WILD-TYPE      1      9     20
D10V6, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         19            9
  CLUS_3         23           20

Clustering(11) Variable = 6P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED        9     12      6
  6P WILD-TYPE      6     22     18
D11V1, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1          9            6
  CLUS_2         12           22
  CLUS_3          6           18
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED       15      5      7
  6P WILD-TYPE     19     10     17
D11V2, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1         15           19
  CLUS_2          5           10
  CLUS_3          7           17
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED       12      6      9
  6P WILD-TYPE     18      8     19
D11V3, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1         12           18
  CLUS_2          6            8
  CLUS_3          9           19
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED        0      9     18
  6P WILD-TYPE      1     19     25
D11V4, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1          0            1
  CLUS_2          9           19
  CLUS_3         18           25
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P MUTATED        6      5      7      9
  6P WILD-TYPE      6      4     18     17
D11V5, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1          6            6
  CLUS_2          5            4
  CLUS_3          7           18
  CLUS_4          9           17
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED        0      9     18
  6P WILD-TYPE      1     19     25
D11V6, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1          0            1
  CLUS_2          9           19
  CLUS_3         18           25

Clustering(12) Variable = 6Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED        9     10      5
  6Q WILD-TYPE      6     24     19
D12V1, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1          9            6
  CLUS_2         10           24
  CLUS_3          5           19
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED       14      4      6
  6Q WILD-TYPE     20     11     18
D12V2, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1         14           20
  CLUS_2          4           11
  CLUS_3          6           18
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED       12      5      7
  6Q WILD-TYPE     18      9     21
D12V3, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1         12           18
  CLUS_2          5            9
  CLUS_3          7           21
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED        0      7     17
  6Q WILD-TYPE      1     21     26
D12V4, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2          7           21
  CLUS_3         17           26
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q MUTATED        5      3      9      7
  6Q WILD-TYPE      7      6     16     19
D12V5, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1          5            7
  CLUS_2          3            6
  CLUS_3          9           16
  CLUS_4          7           19
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED        0      7     17
  6Q WILD-TYPE      1     21     26
D12V6, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2          7           21
  CLUS_3         17           26

Clustering(13) Variable = 7P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED       11     23     19
  7P WILD-TYPE      4     11      5
D13V1, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1         11            4
  CLUS_2         23           11
  CLUS_3         19            5
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED       27     10     16
  7P WILD-TYPE      7      5      8
D13V2, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1         27            7
  CLUS_2         10            5
  CLUS_3         16            8
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED       24      9     19
  7P WILD-TYPE      6      5      9
D13V3, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1         24            6
  CLUS_2          9            5
  CLUS_3         19            9
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED        0     19     33
  7P WILD-TYPE      1      9     10
D13V4, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         19            9
  CLUS_3         33           10
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7P MUTATED        8      8     19     17
  7P WILD-TYPE      4      1      6      9
D13V5, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1          8            4
  CLUS_2          8            1
  CLUS_3         19            6
  CLUS_4         17            9
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED        0     19     33
  7P WILD-TYPE      1      9     10
D13V6, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         19            9
  CLUS_3         33           10

Clustering(14) Variable = 7Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED        9     21     14
  7Q WILD-TYPE      6     13     10
D14V1, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1          9            6
  CLUS_2         21           13
  CLUS_3         14           10
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED       21      9     14
  7Q WILD-TYPE     13      6     10
D14V2, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1         21           13
  CLUS_2          9            6
  CLUS_3         14           10
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED       20      8     15
  7Q WILD-TYPE     10      6     13
D14V3, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1         20           10
  CLUS_2          8            6
  CLUS_3         15           13
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED        0     15     28
  7Q WILD-TYPE      1     13     15
D14V4, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         15           13
  CLUS_3         28           15
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7Q MUTATED        6      8     16     13
  7Q WILD-TYPE      6      1      9     13
D14V5, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1          6            6
  CLUS_2          8            1
  CLUS_3         16            9
  CLUS_4         13           13
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED        0     15     28
  7Q WILD-TYPE      1     13     15
D14V6, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         15           13
  CLUS_3         28           15

Clustering(15) Variable = 8P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED       13     24     19
  8P WILD-TYPE      2     10      5
D15V1, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1         13            2
  CLUS_2         24           10
  CLUS_3         19            5
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED       29      9     18
  8P WILD-TYPE      5      6      6
D15V2, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1         29            5
  CLUS_2          9            6
  CLUS_3         18            6
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED       23     12     20
  8P WILD-TYPE      7      2      8
D15V3, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1         23            7
  CLUS_2         12            2
  CLUS_3         20            8
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED        0     20     35
  8P WILD-TYPE      1      8      8
D15V4, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         20            8
  CLUS_3         35            8
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P MUTATED       11      7     19     18
  8P WILD-TYPE      1      2      6      8
D15V5, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1         11            1
  CLUS_2          7            2
  CLUS_3         19            6
  CLUS_4         18            8
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED        0     20     35
  8P WILD-TYPE      1      8      8
D15V6, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         20            8
  CLUS_3         35            8

Clustering(16) Variable = 8Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED       12     23     16
  8Q WILD-TYPE      3     11      8
D16V1, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1         12            3
  CLUS_2         23           11
  CLUS_3         16            8
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED       26      8     17
  8Q WILD-TYPE      8      7      7
D16V2, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1         26            8
  CLUS_2          8            7
  CLUS_3         17            7
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED       20     11     19
  8Q WILD-TYPE     10      3      9
D16V3, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1         20           10
  CLUS_2         11            3
  CLUS_3         19            9
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED        0     19     31
  8Q WILD-TYPE      1      9     12
D16V4, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         19            9
  CLUS_3         31           12
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q MUTATED        9      7     17     17
  8Q WILD-TYPE      3      2      8      9
D16V5, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1          9            3
  CLUS_2          7            2
  CLUS_3         17            8
  CLUS_4         17            9
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED        0     19     31
  8Q WILD-TYPE      1      9     12
D16V6, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         19            9
  CLUS_3         31           12

Clustering(17) Variable = 9P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED        9     22     18
  9P WILD-TYPE      6     12      6
D17V1, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1          9            6
  CLUS_2         22           12
  CLUS_3         18            6
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED       23     12     14
  9P WILD-TYPE     11      3     10
D17V2, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1         23           11
  CLUS_2         12            3
  CLUS_3         14           10
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED       22      9     17
  9P WILD-TYPE      8      5     11
D17V3, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1         22            8
  CLUS_2          9            5
  CLUS_3         17           11
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED        0     17     31
  9P WILD-TYPE      1     11     12
D17V4, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         17           11
  CLUS_3         31           12
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P MUTATED        8      6     19     15
  9P WILD-TYPE      4      3      6     11
D17V5, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1          8            4
  CLUS_2          6            3
  CLUS_3         19            6
  CLUS_4         15           11
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED        0     17     31
  9P WILD-TYPE      1     11     12
D17V6, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1          0            1
  CLUS_2         17           11
  CLUS_3         31           12

Clustering(18) Variable = 9Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED        8     17     15
  9Q WILD-TYPE      7     17      9
D18V1, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1          8            7
  CLUS_2         17           17
  CLUS_3         15            9
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED       21     10      9
  9Q WILD-TYPE     13      5     15
D18V2, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1         21           13
  CLUS_2         10            5
  CLUS_3          9           15
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED       18      9     12
  9Q WILD-TYPE     12      5     16
D18V3, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1         18           12
  CLUS_2          9            5
  CLUS_3         12           16
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED        0     12     27
  9Q WILD-TYPE      1     16     16
D18V4, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         12           16
  CLUS_3         27           16
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9Q MUTATED        7      6     16     10
  9Q WILD-TYPE      5      3      9     16
D18V5, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1          7            5
  CLUS_2          6            3
  CLUS_3         16            9
  CLUS_4         10           16
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED        0     12     27
  9Q WILD-TYPE      1     16     16
D18V6, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1          0            1
  CLUS_2         12           16
  CLUS_3         27           16

Clustering(19) Variable = 10P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED        8     17     11
  10P WILD-TYPE      7     17     13
D19V1, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1           8             7
  CLUS_2          17            17
  CLUS_3          11            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED       20      5     11
  10P WILD-TYPE     14     10     13
D19V2, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1          20            14
  CLUS_2           5            10
  CLUS_3          11            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED       19      4     13
  10P WILD-TYPE     11     10     15
D19V3, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1          19            11
  CLUS_2           4            10
  CLUS_3          13            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED        0     13     23
  10P WILD-TYPE      1     15     20
D19V4, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          13            15
  CLUS_3          23            20
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P MUTATED        4      4     16     12
  10P WILD-TYPE      8      5      9     14
D19V5, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1           4             8
  CLUS_2           4             5
  CLUS_3          16             9
  CLUS_4          12            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED        0     13     23
  10P WILD-TYPE      1     15     20
D19V6, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          13            15
  CLUS_3          23            20

Clustering(20) Variable = 10Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED        8     12     15
  10Q WILD-TYPE      7     22      9
D20V1, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1           8             7
  CLUS_2          12            22
  CLUS_3          15             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED       24      4      7
  10Q WILD-TYPE     10     11     17
D20V2, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1          24            10
  CLUS_2           4            11
  CLUS_3           7            17
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED       19      7      8
  10Q WILD-TYPE     11      7     20
D20V3, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1          19            11
  CLUS_2           7             7
  CLUS_3           8            20
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED        0      8     26
  10Q WILD-TYPE      1     20     17
D20V4, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2           8            20
  CLUS_3          26            17
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q MUTATED        7      4     16      7
  10Q WILD-TYPE      5      5      9     19
D20V5, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1           7             5
  CLUS_2           4             5
  CLUS_3          16             9
  CLUS_4           7            19
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED        0      8     26
  10Q WILD-TYPE      1     20     17
D20V6, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2           8            20
  CLUS_3          26            17

Clustering(21) Variable = 11P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED        6     16     15
  11P WILD-TYPE      9     18      9
D21V1, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1           6             9
  CLUS_2          16            18
  CLUS_3          15             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED       20      7     10
  11P WILD-TYPE     14      8     14
D21V2, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1          20            14
  CLUS_2           7             8
  CLUS_3          10            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED       14      9     13
  11P WILD-TYPE     16      5     15
D21V3, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1          14            16
  CLUS_2           9             5
  CLUS_3          13            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED        0     13     23
  11P WILD-TYPE      1     15     20
D21V4, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          13            15
  CLUS_3          23            20
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P MUTATED        7      6     12     11
  11P WILD-TYPE      5      3     13     15
D21V5, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1           7             5
  CLUS_2           6             3
  CLUS_3          12            13
  CLUS_4          11            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED        0     13     23
  11P WILD-TYPE      1     15     20
D21V6, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          13            15
  CLUS_3          23            20

Clustering(22) Variable = 11Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED        5     18     17
  11Q WILD-TYPE     10     16      7
D22V1, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1           5            10
  CLUS_2          18            16
  CLUS_3          17             7
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED       20      8     12
  11Q WILD-TYPE     14      7     12
D22V2, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1          20            14
  CLUS_2           8             7
  CLUS_3          12            12
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED       17      7     15
  11Q WILD-TYPE     13      7     13
D22V3, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1          17            13
  CLUS_2           7             7
  CLUS_3          15            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED        0     15     24
  11Q WILD-TYPE      1     13     19
D22V4, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          15            13
  CLUS_3          24            19
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q MUTATED        5      7     14     13
  11Q WILD-TYPE      7      2     11     13
D22V5, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1           5             7
  CLUS_2           7             2
  CLUS_3          14            11
  CLUS_4          13            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED        0     15     24
  11Q WILD-TYPE      1     13     19
D22V6, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          15            13
  CLUS_3          24            19

Clustering(23) Variable = 12P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED       11     19     16
  12P WILD-TYPE      4     15      8
D23V1, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1          11             4
  CLUS_2          19            15
  CLUS_3          16             8
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED       23     10     13
  12P WILD-TYPE     11      5     11
D23V2, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1          23            11
  CLUS_2          10             5
  CLUS_3          13            11
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED       22      6     17
  12P WILD-TYPE      8      8     11
D23V3, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1          22             8
  CLUS_2           6             8
  CLUS_3          17            11
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED        0     17     28
  12P WILD-TYPE      1     11     15
D23V4, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          17            11
  CLUS_3          28            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12P MUTATED        6      7     16     16
  12P WILD-TYPE      6      2      9     10
D23V5, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1           6             6
  CLUS_2           7             2
  CLUS_3          16             9
  CLUS_4          16            10
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED        0     17     28
  12P WILD-TYPE      1     11     15
D23V6, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          17            11
  CLUS_3          28            15

Clustering(24) Variable = 12Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED        9     15      9
  12Q WILD-TYPE      6     19     15
D24V1, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1           9             6
  CLUS_2          15            19
  CLUS_3           9            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED       16      6     11
  12Q WILD-TYPE     18      9     13
D24V2, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1          16            18
  CLUS_2           6             9
  CLUS_3          11            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED       14      4     14
  12Q WILD-TYPE     16     10     14
D24V3, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1          14            16
  CLUS_2           4            10
  CLUS_3          14            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED        0     14     18
  12Q WILD-TYPE      1     14     25
D24V4, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          14            14
  CLUS_3          18            25
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12Q MUTATED        5      5      9     13
  12Q WILD-TYPE      7      4     16     13
D24V5, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1           5             7
  CLUS_2           5             4
  CLUS_3           9            16
  CLUS_4          13            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED        0     14     18
  12Q WILD-TYPE      1     14     25
D24V6, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          14            14
  CLUS_3          18            25

Clustering(25) Variable = 13Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED        8     23     15
  13Q WILD-TYPE      7     11      9
D25V1, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1           8             7
  CLUS_2          23            11
  CLUS_3          15             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED       21      8     17
  13Q WILD-TYPE     13      7      7
D25V2, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1          21            13
  CLUS_2           8             7
  CLUS_3          17             7
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED       19      8     19
  13Q WILD-TYPE     11      6      9
D25V3, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1          19            11
  CLUS_2           8             6
  CLUS_3          19             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED        0     19     27
  13Q WILD-TYPE      1      9     16
D25V4, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          19             9
  CLUS_3          27            16
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q MUTATED        7      7     15     17
  13Q WILD-TYPE      5      2     10      9
D25V5, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1           7             5
  CLUS_2           7             2
  CLUS_3          15            10
  CLUS_4          17             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED        0     19     27
  13Q WILD-TYPE      1      9     16
D25V6, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          19             9
  CLUS_3          27            16

Clustering(26) Variable = 14Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED        9     19     12
  14Q WILD-TYPE      6     15     12
D26V1, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1           9             6
  CLUS_2          19            15
  CLUS_3          12            12
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED       18      7     15
  14Q WILD-TYPE     16      8      9
D26V2, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1          18            16
  CLUS_2           7             8
  CLUS_3          15             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED       14      9     16
  14Q WILD-TYPE     16      5     12
D26V3, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1          14            16
  CLUS_2           9             5
  CLUS_3          16            12
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED        0     16     23
  14Q WILD-TYPE      1     12     20
D26V4, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          16            12
  CLUS_3          23            20
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q MUTATED        6      6     13     14
  14Q WILD-TYPE      6      3     12     12
D26V5, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1           6             6
  CLUS_2           6             3
  CLUS_3          13            12
  CLUS_4          14            12
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED        0     16     23
  14Q WILD-TYPE      1     12     20
D26V6, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          16            12
  CLUS_3          23            20

Clustering(27) Variable = 15Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED        7     16      9
  15Q WILD-TYPE      8     18     15
D27V1, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1           7             8
  CLUS_2          16            18
  CLUS_3           9            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED       13      4     15
  15Q WILD-TYPE     21     11      9
D27V2, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1          13            21
  CLUS_2           4            11
  CLUS_3          15             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED       13      3     16
  15Q WILD-TYPE     17     11     12
D27V3, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1          13            17
  CLUS_2           3            11
  CLUS_3          16            12
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED        0     16     16
  15Q WILD-TYPE      1     12     27
D27V4, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          16            12
  CLUS_3          16            27
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q MUTATED        4      4      9     15
  15Q WILD-TYPE      8      5     16     11
D27V5, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1           4             8
  CLUS_2           4             5
  CLUS_3           9            16
  CLUS_4          15            11
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED        0     16     16
  15Q WILD-TYPE      1     12     27
D27V6, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          16            12
  CLUS_3          16            27

Clustering(28) Variable = 16P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED        6     18     10
  16P WILD-TYPE      9     16     14
D28V1, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1           6             9
  CLUS_2          18            16
  CLUS_3          10            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED       16      7     11
  16P WILD-TYPE     18      8     13
D28V2, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1          16            18
  CLUS_2           7             8
  CLUS_3          11            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED       13      7     13
  16P WILD-TYPE     17      7     15
D28V3, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1          13            17
  CLUS_2           7             7
  CLUS_3          13            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED        0     13     20
  16P WILD-TYPE      1     15     23
D28V4, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          13            15
  CLUS_3          20            23
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P MUTATED        7      3     11     12
  16P WILD-TYPE      5      6     14     14
D28V5, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1           7             5
  CLUS_2           3             6
  CLUS_3          11            14
  CLUS_4          12            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED        0     13     20
  16P WILD-TYPE      1     15     23
D28V6, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          13            15
  CLUS_3          20            23

Clustering(29) Variable = 16Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED        6     17      9
  16Q WILD-TYPE      9     17     15
D29V1, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1           6             9
  CLUS_2          17            17
  CLUS_3           9            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED       16      6     10
  16Q WILD-TYPE     18      9     14
D29V2, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1          16            18
  CLUS_2           6             9
  CLUS_3          10            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED       15      3     13
  16Q WILD-TYPE     15     11     15
D29V3, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1          15            15
  CLUS_2           3            11
  CLUS_3          13            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED        0     13     18
  16Q WILD-TYPE      1     15     25
D29V4, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          13            15
  CLUS_3          18            25
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q MUTATED        3      3     13     12
  16Q WILD-TYPE      9      6     12     14
D29V5, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1           3             9
  CLUS_2           3             6
  CLUS_3          13            12
  CLUS_4          12            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED        0     13     18
  16Q WILD-TYPE      1     15     25
D29V6, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          13            15
  CLUS_3          18            25

Clustering(30) Variable = 17P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED       10     21     10
  17P WILD-TYPE      5     13     14
D30V1, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1          10             5
  CLUS_2          21            13
  CLUS_3          10            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED       17      6     18
  17P WILD-TYPE     17      9      6
D30V2, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1          17            17
  CLUS_2           6             9
  CLUS_3          18             6
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED       15      5     20
  17P WILD-TYPE     15      9      8
D30V3, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1          15            15
  CLUS_2           5             9
  CLUS_3          20             8
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED        0     20     20
  17P WILD-TYPE      1      8     23
D30V4, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          20             8
  CLUS_3          20            23
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P MUTATED        3      6     13     18
  17P WILD-TYPE      9      3     12      8
D30V5, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1           3             9
  CLUS_2           6             3
  CLUS_3          13            12
  CLUS_4          18             8
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED        0     20     20
  17P WILD-TYPE      1      8     23
D30V6, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          20             8
  CLUS_3          20            23

Clustering(31) Variable = 17Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED        6     12     11
  17Q WILD-TYPE      9     22     13
D31V1, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1           6             9
  CLUS_2          12            22
  CLUS_3          11            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED       15      5      9
  17Q WILD-TYPE     19     10     15
D31V2, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1          15            19
  CLUS_2           5            10
  CLUS_3           9            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED       14      3     11
  17Q WILD-TYPE     16     11     17
D31V3, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1          14            16
  CLUS_2           3            11
  CLUS_3          11            17
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED        0     11     17
  17Q WILD-TYPE      1     17     26
D31V4, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          11            17
  CLUS_3          17            26
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17Q MUTATED        2      4     12     10
  17Q WILD-TYPE     10      5     13     16
D31V5, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1           2            10
  CLUS_2           4             5
  CLUS_3          12            13
  CLUS_4          10            16
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED        0     11     17
  17Q WILD-TYPE      1     17     26
D31V6, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          11            17
  CLUS_3          17            26

Clustering(32) Variable = 18P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED       13     25     11
  18P WILD-TYPE      2      9     13
D32V1, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1          13             2
  CLUS_2          25             9
  CLUS_3          11            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED       24      8     17
  18P WILD-TYPE     10      7      7
D32V2, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1          24            10
  CLUS_2           8             7
  CLUS_3          17             7
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED       18     11     19
  18P WILD-TYPE     12      3      9
D32V3, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1          18            12
  CLUS_2          11             3
  CLUS_3          19             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED        0     19     29
  18P WILD-TYPE      1      9     14
D32V4, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          19             9
  CLUS_3          29            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P MUTATED       10      6     15     17
  18P WILD-TYPE      2      3     10      9
D32V5, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1          10             2
  CLUS_2           6             3
  CLUS_3          15            10
  CLUS_4          17             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED        0     19     29
  18P WILD-TYPE      1      9     14
D32V6, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          19             9
  CLUS_3          29            14

Clustering(33) Variable = 18Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED        9     25     15
  18Q WILD-TYPE      6      9      9
D33V1, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1           9             6
  CLUS_2          25             9
  CLUS_3          15             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED       20      9     20
  18Q WILD-TYPE     14      6      4
D33V2, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1          20            14
  CLUS_2           9             6
  CLUS_3          20             4
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED       16     11     22
  18Q WILD-TYPE     14      3      6
D33V3, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1          16            14
  CLUS_2          11             3
  CLUS_3          22             6
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED        0     22     27
  18Q WILD-TYPE      1      6     16
D33V4, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          22             6
  CLUS_3          27            16
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q MUTATED       11      4     14     20
  18Q WILD-TYPE      1      5     11      6
D33V5, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1          11             1
  CLUS_2           4             5
  CLUS_3          14            11
  CLUS_4          20             6
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED        0     22     27
  18Q WILD-TYPE      1      6     16
D33V6, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          22             6
  CLUS_3          27            16

Clustering(34) Variable = 19P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED       10     13     14
  19P WILD-TYPE      5     21     10
D34V1, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1          10             5
  CLUS_2          13            21
  CLUS_3          14            10
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED       22      5     10
  19P WILD-TYPE     12     10     14
D34V2, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1          22            12
  CLUS_2           5            10
  CLUS_3          10            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED       20      3     13
  19P WILD-TYPE     10     11     15
D34V3, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1          20            10
  CLUS_2           3            11
  CLUS_3          13            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED        0     13     23
  19P WILD-TYPE      1     15     20
D34V4, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          13            15
  CLUS_3          23            20
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P MUTATED        2      7     16     11
  19P WILD-TYPE     10      2      9     15
D34V5, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1           2            10
  CLUS_2           7             2
  CLUS_3          16             9
  CLUS_4          11            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED        0     13     23
  19P WILD-TYPE      1     15     20
D34V6, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          13            15
  CLUS_3          23            20

Clustering(35) Variable = 19Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED        9     15     12
  19Q WILD-TYPE      6     19     12
D35V1, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1           9             6
  CLUS_2          15            19
  CLUS_3          12            12
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED       20      4     12
  19Q WILD-TYPE     14     11     12
D35V2, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1          20            14
  CLUS_2           4            11
  CLUS_3          12            12
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED       18      3     15
  19Q WILD-TYPE     12     11     13
D35V3, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1          18            12
  CLUS_2           3            11
  CLUS_3          15            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED        0     15     21
  19Q WILD-TYPE      1     13     22
D35V4, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          15            13
  CLUS_3          21            22
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q MUTATED        2      7     14     13
  19Q WILD-TYPE     10      2     11     13
D35V5, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1           2            10
  CLUS_2           7             2
  CLUS_3          14            11
  CLUS_4          13            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED        0     15     21
  19Q WILD-TYPE      1     13     22
D35V6, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          15            13
  CLUS_3          21            22

Clustering(36) Variable = 20P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED        9     24     15
  20P WILD-TYPE      6     10      9
D36V1, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1           9             6
  CLUS_2          24            10
  CLUS_3          15             9
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED       22      9     17
  20P WILD-TYPE     12      6      7
D36V2, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1          22            12
  CLUS_2           9             6
  CLUS_3          17             7
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED       21      6     21
  20P WILD-TYPE      9      8      7
D36V3, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1          21             9
  CLUS_2           6             8
  CLUS_3          21             7
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED        0     21     27
  20P WILD-TYPE      1      7     16
D36V4, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          21             7
  CLUS_3          27            16
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20P MUTATED        7      6     16     19
  20P WILD-TYPE      5      3      9      7
D36V5, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1           7             5
  CLUS_2           6             3
  CLUS_3          16             9
  CLUS_4          19             7
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED        0     21     27
  20P WILD-TYPE      1      7     16
D36V6, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1           0             1
  CLUS_2          21             7
  CLUS_3          27            16

Clustering(37) Variable = 20Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED        8     25     12
  20Q WILD-TYPE      7      9     12
D37V1, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1           8             7
  CLUS_2          25             9
  CLUS_3          12            12
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED       18      9     18
  20Q WILD-TYPE     16      6      6
D37V2, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1          18            16
  CLUS_2           9             6
  CLUS_3          18             6
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED       16      6     22
  20Q WILD-TYPE     14      8      6
D37V3, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1          16            14
  CLUS_2           6             8
  CLUS_3          22             6
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED        0     22     22
  20Q WILD-TYPE      1      6     21
D37V4, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          22             6
  CLUS_3          22            21
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20Q MUTATED        7      5     12     20
  20Q WILD-TYPE      5      4     13      6
D37V5, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1           7             5
  CLUS_2           5             4
  CLUS_3          12            13
  CLUS_4          20             6
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED        0     22     22
  20Q WILD-TYPE      1      6     21
D37V6, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          22             6
  CLUS_3          22            21

Clustering(38) Variable = 21Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED       10     26     16
  21Q WILD-TYPE      5      8      8
D38V1, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1          10             5
  CLUS_2          26             8
  CLUS_3          16             8
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED       22      9     21
  21Q WILD-TYPE     12      6      3
D38V2, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1          22            12
  CLUS_2           9             6
  CLUS_3          21             3
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED       19      9     23
  21Q WILD-TYPE     11      5      5
D38V3, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1          19            11
  CLUS_2           9             5
  CLUS_3          23             5
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED        0     23     28
  21Q WILD-TYPE      1      5     15
D38V4, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          23             5
  CLUS_3          28            15
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q MUTATED        9      6     15     21
  21Q WILD-TYPE      3      3     10      5
D38V5, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1           9             3
  CLUS_2           6             3
  CLUS_3          15            10
  CLUS_4          21             5
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED        0     23     28
  21Q WILD-TYPE      1      5     15
D38V6, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          23             5
  CLUS_3          28            15

Clustering(39) Variable = 22Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED       10     17     16
  22Q WILD-TYPE      5     17      8
D39V1, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1          10             5
  CLUS_2          17            17
  CLUS_3          16             8
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED       21      9     13
  22Q WILD-TYPE     13      6     11
D39V2, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1          21            13
  CLUS_2           9             6
  CLUS_3          13            11
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED       20      9     14
  22Q WILD-TYPE     10      5     14
D39V3, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1          20            10
  CLUS_2           9             5
  CLUS_3          14            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED        0     14     29
  22Q WILD-TYPE      1     14     14
D39V4, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          14            14
  CLUS_3          29            14
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  22Q MUTATED        8      6     16     13
  22Q WILD-TYPE      4      3      9     13
D39V5, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1           8             4
  CLUS_2           6             3
  CLUS_3          16             9
  CLUS_4          13            13
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED        0     14     29
  22Q WILD-TYPE      1     14     14
D39V6, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1           0             1
  CLUS_2          14            14
  CLUS_3          29            14

Clustering(40) Variable = XQ MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED        8     15     13
  XQ WILD-TYPE      7     19     11
D40V1, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1          8            7
  CLUS_2         15           19
  CLUS_3         13           11
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED       18      5     13
  XQ WILD-TYPE     16     10     11
D40V2, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1         18           16
  CLUS_2          5           10
  CLUS_3         13           11
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED       15      6     14
  XQ WILD-TYPE     15      8     14
D40V3, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1         15           15
  CLUS_2          6            8
  CLUS_3         14           14
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED        0     14     21
  XQ WILD-TYPE      1     14     22
D40V4, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1          0            1
  CLUS_2         14           14
  CLUS_3         21           22
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ MUTATED        4      5     13     13
  XQ WILD-TYPE      8      4     12     13
D40V5, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1          4            8
  CLUS_2          5            4
  CLUS_3         13           12
  CLUS_4         13           13
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED        0     14     21
  XQ WILD-TYPE      1     14     22
D40V6, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1          0            1
  CLUS_2         14           14
  CLUS_3         21           22
> q(save="no")
