
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/OV-TP/6185328/OV-TP.mergedcluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/Append_Data/OV-TP/6154753/OV-TP.merged_data.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=.05", "-cQ=0.25", "-MF=ALL", "-oT=OV-TP", "-nV=Nozzle.R1", "-OP=AGGREGRATED_CLUSTER", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"       "-oT=OV-TP"
[1] "opt"                     "-OP=AGGREGRATED_CLUSTER"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"                 "AGGREGRATED_CLUSTER"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/Append_Data/OV-TP/6154753/OV-TP.merged_data.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/OV-TP/6185328/OV-TP.mergedcluster.txt"

nPatients in clinical file=579, in cluster file=586, common to both=578
[1]  14 578
[1] "MRNA_CNMF"
[1] 3
  1   2   3 
219 214 129 
  1   2   3 
219 214 129 
[1] "MRNA_CHIERARCHICAL"
[1] 3
  1   2   3 
132 214 216 
  1   2   3 
132 214 216 
[1] "MIR_CNMF"
[1] 3
  1   2   3 
157 165 238 
  1   2   3 
157 165 238 
[1] "MIR_CHIERARCHICAL"
[1] 3
  1   2   3   4   5   6 
 66 120 122 102  56  94 
  1   2   3   4   5   6 
 66 120 122 102  56  94 
[1] "CN_CNMF"
[1] 3
  1   2   3 
173 201 188 
  1   2   3 
173 201 188 
[1] "METHLYATION_CNMF"
[1] 3
  1   2   3 
175 180 219 
  1   2   3 
175 180 219 
[1] "RPPA_CNMF"
[1] 3
  1   2   3 
123 199  85 
  1   2   3 
123 199  85 
[1] "RPPA_CHIERARCHICAL"
[1] 3
  1   2   3   4 
 60  86 109 152 
  1   2   3   4 
 60  86 109 152 
[1] "MRNASEQ_CNMF"
[1] 3
  1   2   3 
102  67  92 
  1   2   3 
102  67  92 
[1] "MRNASEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
111 111  39 
  1   2   3 
111 111  39 
[1] "MIRSEQ_CNMF"
[1] 3
  1   2   3 
124 185 144 
  1   2   3 
124 185 144 
[1] "MIRSEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
  5 287 161 
  1   2   3 
  5 287 161 
[1] "MIRSEQ_MATURE_CNMF"
[1] 3
  1   2   3 
 98 198 157 
  1   2   3 
 98 198 157 
[1] "MIRSEQ_MATURE_CHIERARCHICAL"
[1] 3
  1   2   3 
158   9 286 
  1   2   3 
158   9 286 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
 [1] "YEARSTOBIRTH"                                      
 [2] "VITALSTATUS"                                       
 [3] "DAYSTODEATH"                                       
 [4] "DAYSTOLASTFOLLOWUP"                                
 [5] "PRIMARYSITEOFDESEASE"                              
 [6] "NEOPLASM.DISEASESTAGE"                             
 [7] "PATHOLOGY.T.STAGE"                                 
 [8] "PATHOLOGY.N.STAGE"                                 
 [9] "PATHOLOGY.M.STAGE"                                 
[10] "DCCUPLOADDATE"                                     
[11] "GENDER"                                            
[12] "DATEOFINITIALPATHOLOGICDIAGNOSIS"                  
[13] "RADIATIONTHERAPY"                                  
[14] "KARNOFSKYPERFORMANCESCORE"                         
[15] "EXAMINATIONS.EXAMINATION.KARNOFSKYPERFORMANCESCORE"
[16] "HISTOLOGICALTYPE"                                  
[17] "TUMORGRADE"                                        
[18] "TUMORSTAGE"                                        
[19] "PATIENTTUMORRECURRENCESTATUS"                      
[20] "DAYSTOTUMORRECURRENCE"                             
[21] "CHEMOTHERAPY"                                      
[22] "RADIATIONS.RADIATION.REGIMENINDICATION"            
[23] "COMPLETENESS.OF.RESECTION"                         
[24] "GLEASON_SCORE"                                     
[25] "PSA_VALUE"                                         
[26] "DAYS_TO_PSA"                                       
[27] "BATCHNUMBER"                                       

Input Data has 27 rows and 578 columns.

[1] "Batch" "27"   
[1] "Last Follow UP"
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
        1224         1247           55         1495           61         1418 
TCGA-04-1341 TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 
          NA          563          361         1992         1918         1483 
TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1357 TCGA-04-1360 
         656         1946         1991         1499           NA           NA 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1369 
         989         1348         1024         2328         2174          642 
TCGA-04-1370 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1519 
        1824         2505         1720         1265          608           NA 
TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 
        1167         3622          884         2561         1685         1487 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
         848          871         1966         1102          969         1451 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
        1379           NA           NA           NA           NA           NA 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
          NA           NA           NA           NA           NA         1751 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 
        1882         1684          927          547          178           92 
TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
         260         2967          187          186           NA           NA 
TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 
        3418         2163         1919         1209           NA          819 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 
         379         1652          788         2478          562         1011 
TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 
         982          356          118         1077         1089          460 
TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 
         604          189          748         1355         1204           83 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
         377          945          462          541         1678           75 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 
         340          346          351         1036          981          944 
TCGA-13-0765 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
         869          651          256         1184         1117          873 
TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 
         923          595          265          237          247          252 
TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 
         249         1333         1073         1073          414         2096 
TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 
        3260         2780         2259         2027         2141         1880 
TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0894 TCGA-13-0897 TCGA-13-0899 
        2068         2099         1319         1509         1748         1708 
TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 
        1736          589         1441         1470         1455         1367 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
        1364         1128          842         1036          912          643 
TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
         453          420          141          195          185          331 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 
         201          224          184          180          208          143 
TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 
         128          162         1661         2648         1877          894 
TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 
        2982          629          681         2154         2521         1595 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
        2237         1161         1497          129         1652         1144 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 
        1167          425          999          504          128          134 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 
         145          126           78          118           94          433 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2066 TCGA-13-2071 
         372          261          328          266          295          191 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 
          NA          789          797         2196          836          772 
TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 
         580          507           89           81         1446         1293 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
        1233          468          816          965         1503          268 
TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1107 TCGA-23-1109 TCGA-23-1110 
         885          574           68            9         1562         1658 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 
          98          949         2089          139         1013         2616 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
        3953          130          194         1189         1018         1768 
TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 
          16          759         3525         2661         2788         2342 
TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-23-2647 TCGA-23-2649 
        1516           84          143          137          135          116 
TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 
         232          597          354          663         1264          233 
TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 
         679         1645         1933         1442          192          194 
TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 
         238          243          239           23          190          183 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 
         181          163          146          528          862          583 
TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 
         568         1324          260         2218          379         1373 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
        3224          277          104           36          675          820 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 
        1745         1955          493         1721         1249         1579 
TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 
        1259         1767         2692         2148         1213          594 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 
        1341         1384         1451          787          312          524 
TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 
        2742         2687         1470         1163          253          106 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 
         113          116          133          343          175          167 
TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 
         298          689          919          499          336         2467 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 
         148         4623         1364         1769         1059         3336 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
         439         1641          562          857         1947         1353 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 
        1736         1100           24           11         1446          962 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 
        2143         1356           25         2049         1102          506 
TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 
        1007         1699         1620           31          819          973 
TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 
        1553         1126           31         1064         1977         1124 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1324 TCGA-25-1325 TCGA-25-1326 
        1033           91          365         1035          976          944 
TCGA-25-1328 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 
        1979           90          565          548          480           11 
TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
         626          239            9         1732         1843         1081 
TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 
        1558          454          760          549         2587          396 
TCGA-25-2390 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 
          NA         1492           31         1157           92          365 
TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 
        1369          608         1278           90          882          942 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 
         820         2399         1360         1435         3095         1172 
TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 
          24         1025          948         2077           16          514 
TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 
         567         1815          555         1276          889         1053 
TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 
         517         2606         2031         1914         1189          950 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 
         699          741          685          526          376          360 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 
         374          454          254          219          163         1053 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 
        2621         1977         1900         1372          148         1285 
TCGA-29-2432 TCGA-29-2434 TCGA-29-2435 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 
         360          349           34          297         1158         1579 
TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
        1103           75          477            8         1462         1366 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1869 TCGA-30-1880 
        1058          185         1114           36         1563         1751 
TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 
         738          914         1484         1386          918          571 
TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 
         683          204         1293         1341           66          874 
TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 
         884          655          695          686          260          914 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 
         783          847          737          751         1066         1004 
TCGA-36-2532 TCGA-36-2533 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 
         897           NA          906          788          763          724 
TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 
         657           68          638          557          624          431 
TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
         184          491          349          792          722          287 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
         230          227          681           NA          731          346 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
         643           53          679          881          762          761 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 
        5480           NA           NA         3532           NA           NA 
TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 
          NA          164           NA          338          245          637 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 
         955          564          848          132          966          866 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 
        1484         1364         1089           74         1024         1329 
TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 
          43          256          176          347          396          276 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 
        1038          952         1126         1292         1488         1721 
TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
        2060         1321          479         1161           60          168 
TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 
         441          547          121          931         1212          932 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 
          36         1398         1381          146          145         1573 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 
        2182         1875         1776         1844         1992         1688 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 
         197         2337          629         1354         3824          676 
TCGA-61-2610 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 TCGA-72-4231 TCGA-72-4232 
        1579          193          945          261           NA           NA 
TCGA-72-4233 TCGA-72-4234 TCGA-72-4235 TCGA-72-4236 TCGA-72-4237 TCGA-72-4238 
          NA           NA           NA           NA           NA           NA 
TCGA-72-4240 TCGA-72-4241 
          NA           NA 
Variable 1:'AGE':	nDistinctValues=55,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 3:'DAYSTODEATH':	nDistinctValues=272,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'DAYSTOLASTFOLLOWUP':	nDistinctValues=466,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 5:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'NEOPLASM.DISEASESTAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'PATHOLOGY.T.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 8:'PATHOLOGY.N.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 9:'PATHOLOGY.M.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'GENDER':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 12:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=18,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 13:'RADIATION.THERAPY':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 14:'KARNOFSKY.PERFORMANCE.SCORE':	nDistinctValues=4,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 15:'EXAMINATIONS.EXAMINATION.KARNOFSKYPERFORMANCESCORE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 16:'HISTOLOGICAL.TYPE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 17:'TUMOR.GRADE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 18:'TUMOR.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 19:'PATIENTTUMORRECURRENCESTATUS':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 20:'DAYSTOTUMORRECURRENCE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 21:'CHEMOTHERAPY':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 22:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 23:'COMPLETENESS.OF.RESECTION':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 24:'GLEASON_SCORE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 25:'PSA_VALUE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 26:'DAYS_TO_PSA':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 27:'BATCH.NUMBER':	nDistinctValues=17,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "PRIMARY.SITE.OF.DISEASE"               
[3] "KARNOFSKY.PERFORMANCE.SCORE"           
[4] "RADIATIONS.RADIATION.REGIMENINDICATION"
[5] "COMPLETENESS.OF.RESECTION"             
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 578 columns, 1 survival variables, and 5 non-survival variables.
AGE, nv=55, binary=FALSE, numeric=TRUE
PRIMARY.SITE.OF.DISEASE, nv=3, binary=FALSE, numeric=FALSE
KARNOFSKY.PERFORMANCE.SCORE, nv=4, binary=FALSE, numeric=TRUE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE
COMPLETENESS.OF.RESECTION, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = MRNA_CNMF
D1V1, survival
          sevent
clus2        0   1
  subtype1  92 124
  subtype2 120  92
  subtype3  53  76
subtype1 subtype2 subtype3 
     216      212      129 
subtype1 subtype2 subtype3 
     124       92       76 
$subtype1
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1342 TCGA-04-1347 TCGA-04-1350 
       40.24        41.00         1.81        18.51        63.06        63.98 
TCGA-04-1351 TCGA-04-1356 TCGA-04-1364 TCGA-04-1367 TCGA-04-1369 TCGA-04-1371 
       65.46        49.28        33.67        71.47        21.11        82.36 
TCGA-04-1514 TCGA-04-1517 TCGA-04-1525 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 
       56.55        19.99        38.37        84.20        55.40        48.89 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1652 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 
       27.88        28.64        31.86        45.34        29.16         9.47 
TCGA-09-0369 TCGA-09-1661 TCGA-09-1664 TCGA-09-1669 TCGA-09-1672 TCGA-09-1673 
       35.54        38.43        74.89        30.48         5.85         3.02 
TCGA-09-1674 TCGA-09-1675 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2053 
        8.55        97.55         4.50       112.37        71.11        39.75 
TCGA-09-2054 TCGA-09-2055 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 
       20.91        26.93        54.31        25.91        81.47        18.48 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0938 TCGA-13-0717 TCGA-13-0724 
       11.70         3.88        35.41        19.86        24.59         2.73 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0757 TCGA-13-0762 TCGA-13-0766 
       15.19        17.79        55.17        11.18        32.25        21.40 
TCGA-13-0794 TCGA-13-0799 TCGA-13-0800 TCGA-13-0802 TCGA-13-0883 TCGA-13-0887 
       30.35         7.79         8.12         8.19        68.91        66.64 
TCGA-13-0888 TCGA-13-0891 TCGA-13-0899 TCGA-13-0901 TCGA-13-0906 TCGA-13-0910 
       70.39        69.01        56.15        19.36        44.94        37.08 
TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 TCGA-13-0923 TCGA-13-1403 
       34.06        29.98        21.14        13.81         6.41        10.88 
TCGA-13-1407 TCGA-13-1409 TCGA-13-1477 TCGA-13-1482 TCGA-13-1487 TCGA-13-1489 
        6.05         6.84        54.61        61.71        22.39        82.88 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1495 TCGA-13-1505 TCGA-13-1506 TCGA-13-1510 
       52.44        73.55        49.22         4.21         4.41         2.56 
TCGA-13-2057 TCGA-13-2066 TCGA-20-0990 TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 
       14.24         9.70        25.94        72.20        25.38        19.07 
TCGA-20-1686 TCGA-23-1021 TCGA-23-1022 TCGA-23-1024 TCGA-23-1029 TCGA-23-1030 
        2.93        47.54        42.51        15.39         8.81        29.10 
TCGA-23-1031 TCGA-23-1032 TCGA-23-1107 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
       18.87         2.24         0.30        51.35        54.51         3.22 
TCGA-23-1113 TCGA-23-1114 TCGA-23-1119 TCGA-23-1121 TCGA-23-1122 TCGA-23-1809 
       31.20        68.68       129.96         6.38        39.09         0.53 
TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0979 TCGA-24-0982 
        2.76         4.70         4.50         7.63        41.56        22.32 
TCGA-24-1103 TCGA-24-1413 TCGA-24-1419 TCGA-24-1423 TCGA-24-1424 TCGA-24-1426 
       54.08         6.31         7.86         6.25         6.02         5.36 
TCGA-24-1430 TCGA-24-1464 TCGA-24-1467 TCGA-24-1469 TCGA-24-1544 TCGA-24-1548 
       28.34        12.46       105.99         9.11        26.96        16.21 
TCGA-24-1552 TCGA-24-1555 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1567 
       41.39        88.50        39.88        19.53        44.09        17.23 
TCGA-24-1603 TCGA-24-1614 TCGA-24-1616 TCGA-24-1844 TCGA-24-1923 TCGA-24-2019 
       90.15        48.33        38.24         3.72        22.65         4.87 
TCGA-24-2020 TCGA-24-2024 TCGA-24-2027 TCGA-24-2030 TCGA-24-2033 TCGA-24-2036 
      151.99        58.16       109.68        53.95        18.48        64.01 
TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2295 TCGA-24-2297 TCGA-25-1312 
       44.48        57.07        36.16        33.11        55.86         1.02 
TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1321 TCGA-25-1323 
       31.99        51.06        37.02         1.02        33.96        12.00 
TCGA-25-1324 TCGA-25-1325 TCGA-25-1627 TCGA-25-1631 TCGA-25-1632 TCGA-25-1634 
       34.03        32.09         0.36         0.30        56.94        35.54 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-2393 TCGA-25-2400 TCGA-29-1691 
       14.93        24.99        18.05        38.04        42.02        47.18 
TCGA-29-1697 TCGA-29-1702 TCGA-29-1703 TCGA-29-1762 TCGA-29-1763 TCGA-29-1774 
       31.17        18.64        59.67        85.68        66.77        17.29 
TCGA-29-1775 TCGA-29-2414 TCGA-29-2425 TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 
       12.36        86.17        65.00         4.87        42.25        11.47 
TCGA-30-1714 TCGA-30-1853 TCGA-30-1859 TCGA-30-1866 TCGA-31-1955 TCGA-36-1571 
       38.07        36.26        48.07        36.62        42.51        22.85 
TCGA-36-1575 TCGA-36-1577 TCGA-36-2537 TCGA-36-2538 TCGA-36-2544 TCGA-36-2547 
        8.55        25.74        25.91        25.08        20.98        20.52 
TCGA-36-2552 TCGA-42-2591 TCGA-57-1582 TCGA-57-1583 TCGA-57-1586 TCGA-57-1992 
       11.47        22.39        24.03        11.38        22.32        28.96 
TCGA-59-2350 TCGA-59-2352 TCGA-59-2363 TCGA-59-2372 TCGA-61-1728 TCGA-61-1730 
       22.32         9.40         5.39        44.78        27.88         4.34 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1900 TCGA-61-1910 TCGA-61-1917 TCGA-61-2088 
       33.67        43.69         5.79        37.02        43.43         4.77 
TCGA-61-2092 TCGA-61-2096 TCGA-61-2098 TCGA-61-2101 TCGA-61-2110 TCGA-61-2111 
       51.72        58.39        65.49        55.50        44.52       125.72 

$subtype2
TCGA-04-1336 TCGA-04-1346 TCGA-04-1348 TCGA-04-1349 TCGA-04-1361 TCGA-04-1362 
       49.15        65.49        48.76        21.57        32.52        44.32 
TCGA-04-1365 TCGA-04-1516 TCGA-04-1536 TCGA-04-1649 TCGA-04-1651 TCGA-04-1654 
       76.54        41.59        29.06        64.64        36.23        47.70 
TCGA-09-0366 TCGA-09-0367 TCGA-09-1659 TCGA-09-1662 TCGA-09-1665 TCGA-09-1666 
       57.73        17.95         9.96        89.33        41.59        57.57 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1670 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 
       61.87        55.36        17.98         6.15         6.12        35.15 
TCGA-09-2051 TCGA-09-2056 TCGA-10-0931 TCGA-10-0936 TCGA-10-0937 TCGA-13-0720 
       63.09        12.46        32.28        35.80        15.12        44.55 
TCGA-13-0723 TCGA-13-0725 TCGA-13-0755 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 
       39.58        12.39         2.47        11.38        11.54        34.06 
TCGA-13-0764 TCGA-13-0765 TCGA-13-0791 TCGA-13-0792 TCGA-13-0795 TCGA-13-0797 
       31.04        28.57        38.93        36.72        19.56         8.71 
TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0884 TCGA-13-0885 TCGA-13-0893 
        8.28        43.82        35.28       107.18        91.40        43.36 
TCGA-13-0897 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0921 TCGA-13-0924 
       57.47        47.38        48.33        47.84         4.64         6.08 
TCGA-13-1410 TCGA-13-1484 TCGA-13-1488 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
        4.70        98.04        70.82         4.24        54.31        37.61 
TCGA-13-1500 TCGA-13-1507 TCGA-13-1511 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 
       13.97         4.77         3.88        12.23         8.58        10.78 
TCGA-13-2065 TCGA-20-0987 TCGA-20-0991 TCGA-20-1685 TCGA-20-1687 TCGA-23-1026 
        8.75        23.05        26.20        16.67         2.66        26.83 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1118 TCGA-23-1120 TCGA-23-1123 TCGA-23-1124 
       31.73        49.41        86.01         4.27        33.47        58.13 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2649 
       24.95       115.89        91.66        77.00        49.84         3.81 
TCGA-24-0968 TCGA-24-0980 TCGA-24-1104 TCGA-24-1416 TCGA-24-1417 TCGA-24-1428 
       19.63         7.66        63.55         6.38         7.82        17.36 
TCGA-24-1431 TCGA-24-1436 TCGA-24-1466 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 
       19.17         8.55        45.14         3.42         1.18        22.19 
TCGA-24-1549 TCGA-24-1551 TCGA-24-1553 TCGA-24-1556 TCGA-24-1565 TCGA-24-1604 
       56.58        51.91        58.09        70.62        10.26        88.34 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1920 
        8.32         3.48         3.81         4.37        11.28         9.80 
TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2023 TCGA-24-2026 TCGA-24-2261 
       30.21        16.41        81.11        44.84        34.82         0.79 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2281 TCGA-24-2290 TCGA-25-1313 
        0.36        47.54        31.63        44.58        36.23        26.93 
TCGA-25-1319 TCGA-25-1322 TCGA-25-1625 TCGA-25-1630 TCGA-25-1878 TCGA-25-2391 
       65.00         2.99        18.02         7.86        85.05        49.05 
TCGA-25-2392 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 TCGA-25-2409 TCGA-29-1688 
        1.02         3.02        12.00        19.99        26.96        78.87 
TCGA-29-1694 TCGA-29-1696 TCGA-29-1699 TCGA-29-1707 TCGA-29-1711 TCGA-29-1761 
       38.53        33.70         0.53        41.95        34.62        17.00 
TCGA-29-1769 TCGA-29-1771 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 
       22.98        22.52        11.84        12.30        14.93         8.35 
TCGA-29-1784 TCGA-29-1785 TCGA-29-2427 TCGA-29-2428 TCGA-30-1856 TCGA-30-1860 
        5.36        34.62        62.47        45.11        15.68        44.91 
TCGA-30-1880 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1953 TCGA-36-1568 
       57.57        45.57        30.18        18.77         6.71        28.73 
TCGA-36-1570 TCGA-36-1574 TCGA-36-1578 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 
       21.53        22.55        27.85        24.69        35.05        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2542 TCGA-36-2543 TCGA-36-2545 TCGA-36-2549 
       29.49        29.79        21.60         2.24        18.31         6.05 
TCGA-36-2551 TCGA-42-2582 TCGA-42-2589 TCGA-42-2590 TCGA-57-1584 TCGA-57-1993 
       16.14        26.04         7.56         7.46        21.14        25.05 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2351 TCGA-59-2355 TCGA-61-1722 
       25.02       180.16        80.12       116.12         2.14         8.05 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1734 TCGA-61-1736 TCGA-61-1738 
       20.94        31.40        18.54        28.47        48.79        35.80 
TCGA-61-1740 TCGA-61-1895 TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 
        2.43         1.41         8.42        11.41        13.02         9.07 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 
       34.13        31.30        42.48        48.92        56.58        67.73 
TCGA-61-1918 TCGA-61-1995 TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 TCGA-61-2012 
       15.75         1.97        14.50        17.98        30.61        30.64 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2094 TCGA-61-2097 
        1.18        45.96        45.40         4.80        71.74        60.62 
TCGA-61-2104 TCGA-61-2109 
       76.83        20.68 

$subtype3
TCGA-04-1337 TCGA-04-1338 TCGA-04-1343 TCGA-04-1530 TCGA-10-0930 TCGA-13-0714 
        2.01        46.62        11.87       119.08        33.24         6.21 
TCGA-13-0726 TCGA-13-0768 TCGA-13-0793 TCGA-13-0805 TCGA-13-0807 TCGA-13-0886 
       31.07         8.42        28.70        35.28        13.61        74.27 
TCGA-13-0889 TCGA-13-0890 TCGA-13-0894 TCGA-13-0900 TCGA-13-0908 TCGA-13-0911 
       61.81        67.99        49.61        57.07        44.84        27.68 
TCGA-13-0919 TCGA-13-1404 TCGA-13-1405 TCGA-13-1408 TCGA-13-1411 TCGA-13-1412 
       14.89         6.61         7.36         5.92         4.21         5.33 
TCGA-13-1481 TCGA-13-1483 TCGA-13-1485 TCGA-13-1494 TCGA-13-1499 TCGA-13-1501 
       87.06        29.39        20.68        38.17        38.37        32.84 
TCGA-13-1504 TCGA-13-1509 TCGA-13-1512 TCGA-13-2071 TCGA-20-1682 TCGA-23-1023 
       16.57         4.14         3.09         6.28        27.48        40.54 
TCGA-23-1116 TCGA-23-1117 TCGA-23-2078 TCGA-23-2647 TCGA-24-0970 TCGA-24-0975 
        4.57        33.30        87.48         4.44        11.64        21.80 
TCGA-24-1105 TCGA-24-1418 TCGA-24-1422 TCGA-24-1425 TCGA-24-1427 TCGA-24-1434 
       47.41         7.99         0.76         5.95         4.80        18.67 
TCGA-24-1435 TCGA-24-1463 TCGA-24-1545 TCGA-24-1546 TCGA-24-1550 TCGA-24-1562 
       43.53        72.92        57.37        64.27        41.06        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1849 TCGA-24-1850 TCGA-24-1928 TCGA-24-2029 
       47.70        25.87         5.75         5.49        11.05        14.43 
TCGA-24-2035 TCGA-24-2280 TCGA-24-2288 TCGA-24-2289 TCGA-24-2293 TCGA-24-2298 
       28.18        70.45         0.82        67.36        16.64        53.26 
TCGA-25-1318 TCGA-25-1320 TCGA-25-1326 TCGA-25-1328 TCGA-25-1329 TCGA-25-1623 
       34.98        36.95        31.04        65.06         2.96        18.58 
TCGA-25-1626 TCGA-25-1628 TCGA-25-1633 TCGA-25-1635 TCGA-25-2042 TCGA-25-2398 
       15.78        20.58        60.59        51.22        13.02        45.01 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-29-1690 TCGA-29-1693 TCGA-29-1695 
        2.96        29.00        30.97        44.71       101.75         0.79 
TCGA-29-1698 TCGA-29-1701 TCGA-29-1705 TCGA-29-1710 TCGA-29-1764 TCGA-29-1766 
       68.28        16.90        18.25        29.23        62.93        39.09 
TCGA-29-1768 TCGA-29-1770 TCGA-29-1783 TCGA-29-2432 TCGA-29-2436 TCGA-30-1718 
       31.23        24.36         7.20        11.84         9.76        51.91 
TCGA-30-1855 TCGA-30-1857 TCGA-30-1861 TCGA-30-1862 TCGA-30-1867 TCGA-30-1887 
        2.47         0.26        34.78         6.08         1.18        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1951 TCGA-31-1956 TCGA-31-1959 TCGA-36-1569 
       30.05        48.79        22.45        44.09         2.17        29.06 
TCGA-36-1576 TCGA-36-1580 TCGA-36-2540 TCGA-36-2548 TCGA-42-2587 TCGA-42-2588 
       30.05        24.23        23.80        14.17        23.74         9.44 
TCGA-57-1585 TCGA-59-2354 TCGA-61-1721 TCGA-61-1733 TCGA-61-1737 TCGA-61-1919 
        1.74        34.39        11.11        31.76        44.84        38.17 
TCGA-61-1998 TCGA-61-2003 TCGA-61-2009 TCGA-61-2095 TCGA-61-2102 TCGA-61-2113 
        5.52         3.98        39.85        61.64         6.48        22.22 
TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        6.35        31.07         8.58 

subtype1 subtype2 subtype3 
    0.30     0.36     0.26 
subtype1 subtype2 subtype3 
  151.99   180.16   119.08 
subtype1 subtype2 subtype3 
  29.570   27.405   25.870 
[1] "0.3 - 152.0 (29.6)" "0.4 - 180.2 (27.4)" "0.3 - 119.1 (25.9)"
  [1] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
  [7] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [13] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [19] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [25] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [37] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [43] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [49] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
 [55] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [61] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [67] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [73] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [85] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
 [97] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[103] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[115] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[121] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[139] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[145] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[151] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[157] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[163] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[181] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[187] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[193] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[199] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[205] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[217] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[223] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[229] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[241] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[247] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[253] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[259] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[265] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[271] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[277] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[283] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[289] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[307] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[325] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[331] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[343] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[355] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[361] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[373] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[379] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[385] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[397] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[403] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[409] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[415] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[421] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[427] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[433] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[439] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[445] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[451] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[457] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[463] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[469] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[475] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[481] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[487] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[493] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[499] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[505] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[511] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[517] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[523] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[529] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[535] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[541] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[547] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[553] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
  [1] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
  [7] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [13] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [19] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [25] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [37] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [43] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [49] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
 [55] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [61] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [67] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [73] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [85] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
 [97] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[103] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[115] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[121] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[139] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[145] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[151] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[157] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[163] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[181] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[187] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[193] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[199] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[205] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[217] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[223] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[229] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[241] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[247] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[253] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[259] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[265] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[271] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[277] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[283] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[289] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[307] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[325] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[331] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[343] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[355] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[361] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[373] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[379] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[385] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[397] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[403] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[409] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[415] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[421] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[427] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[433] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[439] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[445] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[451] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[457] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[463] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[469] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[475] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[481] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[487] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[493] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[499] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[505] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[511] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[517] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[523] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[529] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[535] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[541] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[547] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[553] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
  [1] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
  [7] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [13] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [19] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [25] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [37] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [43] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [49] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
 [55] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [61] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [67] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [73] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
 [85] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
 [97] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[103] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[109] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[115] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[121] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[133] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[139] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[145] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[151] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[157] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[163] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[175] "subtype1" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[181] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[187] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[193] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[199] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[205] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[217] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[223] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[229] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[241] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[247] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[253] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[259] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype1"
[265] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[271] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[277] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[283] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[289] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[295] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[307] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[325] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[331] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[337] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[343] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[349] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[355] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[361] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[367] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[373] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[379] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[385] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[391] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[397] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[403] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[409] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[415] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[421] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[427] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[433] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[439] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[445] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[451] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[457] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[463] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[469] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[475] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[481] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[487] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[493] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[499] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[505] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[511] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[517] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[523] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[529] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[535] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[541] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[547] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[553] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
D1V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       0   219                0
  subtype2       1   212                1
  subtype3       1   127                1
D1V3, multiclass
D1V4, continuous
D1V5, binary
          cls
clus         0   1
  subtype1   2 217
  subtype2   1 213
  subtype3   0 129
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    2  217
  subtype2    1  213
  subtype3    0  129
     clus
vv    subtype1 subtype2 subtype3
  NO         2        1        0
  YES      217      213      129
          vv
clus       R0 R1 R2
  subtype1  6  9  0
  subtype2  7  9  0
  subtype3  1  9  1
D1V6, multiclass

Clustering(2) Variable = MRNA_CHIERARCHICAL
D2V1, survival
          sevent
clus2        0   1
  subtype1  52  80
  subtype2  85 126
  subtype3 128  86
subtype1 subtype2 subtype3 
     132      211      214 
subtype1 subtype2 subtype3 
      80      126       86 
$subtype1
TCGA-04-1332 TCGA-04-1337 TCGA-04-1338 TCGA-04-1530 TCGA-10-0930 TCGA-13-0726 
       41.00         2.01        46.62       119.08        33.24        31.07 
TCGA-13-0761 TCGA-13-0768 TCGA-13-0793 TCGA-13-0884 TCGA-13-0893 TCGA-13-0894 
       34.06         8.42        28.70       107.18        43.36        49.61 
TCGA-13-0900 TCGA-13-0908 TCGA-13-0919 TCGA-13-1405 TCGA-13-1408 TCGA-13-1410 
       57.07        44.84        14.89         7.36         5.92         4.70 
TCGA-13-1411 TCGA-13-1412 TCGA-13-1481 TCGA-13-1483 TCGA-13-1485 TCGA-13-1494 
        4.21         5.33        87.06        29.39        20.68        38.17 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1509 
       38.37        13.97        32.84        16.57         4.21         4.14 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2071 TCGA-20-1682 TCGA-23-1023 TCGA-23-1026 
        3.88         3.09         6.28        27.48        40.54        26.83 
TCGA-23-1027 TCGA-23-1116 TCGA-23-1117 TCGA-23-2078 TCGA-23-2647 TCGA-24-0970 
       31.73         4.57        33.30        87.48         4.44        11.64 
TCGA-24-0975 TCGA-24-1418 TCGA-24-1422 TCGA-24-1425 TCGA-24-1427 TCGA-24-1434 
       21.80         7.99         0.76         5.95         4.80        18.67 
TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1545 TCGA-24-1546 TCGA-24-1562 
       43.53         8.55        72.92        57.37        64.27        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1849 TCGA-24-1923 TCGA-24-1928 TCGA-24-1930 
       47.70        25.87         5.75        22.65        11.05        81.11 
TCGA-24-2029 TCGA-24-2035 TCGA-24-2254 TCGA-24-2262 TCGA-24-2271 TCGA-24-2280 
       14.43        28.18        57.07         0.36        31.63        70.45 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2293 TCGA-24-2298 TCGA-25-1320 TCGA-25-1322 
        0.82        67.36        16.64        53.26        36.95         2.99 
TCGA-25-1326 TCGA-25-1328 TCGA-25-1329 TCGA-25-1623 TCGA-25-1626 TCGA-25-1628 
       31.04        65.06         2.96        18.58        15.78        20.58 
TCGA-25-1630 TCGA-25-1633 TCGA-25-1635 TCGA-25-2042 TCGA-25-2398 TCGA-25-2401 
        7.86        60.59        51.22        13.02        45.01         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 
       29.00        30.97        44.71       101.75        38.53         0.79 
TCGA-29-1698 TCGA-29-1705 TCGA-29-1710 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 
       68.28        18.25        29.23        62.93        39.09        31.23 
TCGA-29-1770 TCGA-29-2432 TCGA-29-2436 TCGA-30-1718 TCGA-30-1855 TCGA-30-1857 
       24.36        11.84         9.76        51.91         2.47         0.26 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1867 TCGA-30-1891 TCGA-30-1892 TCGA-31-1946 
       34.78         6.08         1.18        30.05        48.79        30.18 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1569 TCGA-36-1576 TCGA-36-1580 TCGA-36-2538 
       44.09         2.17        29.06        30.05        24.23        25.08 
TCGA-36-2540 TCGA-36-2548 TCGA-42-2587 TCGA-42-2588 TCGA-57-1585 TCGA-59-2354 
       23.80        14.17        23.74         9.44         1.74        34.39 
TCGA-61-1721 TCGA-61-1733 TCGA-61-1737 TCGA-61-1919 TCGA-61-1998 TCGA-61-2002 
       11.11        31.76        44.84        38.17         5.52        17.98 
TCGA-61-2003 TCGA-61-2095 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        3.98        61.64        22.22         6.35        31.07         8.58 

$subtype2
TCGA-04-1331 TCGA-04-1335 TCGA-04-1342 TCGA-04-1347 TCGA-04-1350 TCGA-04-1351 
       40.24         1.81        18.51        63.06        63.98        65.46 
TCGA-04-1356 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1369 
       49.28        44.32        33.67        76.54        71.47        21.11 
TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 TCGA-04-1525 TCGA-04-1536 TCGA-04-1542 
       82.36        56.55        19.99        38.37        29.06        84.20 
TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1652 TCGA-04-1655 
       55.40        48.89        27.88        28.64        31.86        45.34 
TCGA-09-0364 TCGA-09-0365 TCGA-09-0369 TCGA-09-1661 TCGA-09-1664 TCGA-09-1666 
       29.16         9.47        35.54        38.43        74.89        57.57 
TCGA-09-1669 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2048 TCGA-09-2049 
       30.48         3.02         8.55        97.55         4.50       112.37 
TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-10-0925 TCGA-10-0926 
       71.11        39.75        20.91        26.93        54.31        25.91 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 
       81.47        18.48        32.28        11.70         3.88        35.41 
TCGA-10-0936 TCGA-10-0938 TCGA-13-0717 TCGA-13-0730 TCGA-13-0762 TCGA-13-0794 
       35.80        19.86        24.59        17.79        32.25        30.35 
TCGA-13-0800 TCGA-13-0802 TCGA-13-0883 TCGA-13-0888 TCGA-13-0891 TCGA-13-0899 
        8.12         8.19        68.91        70.39        69.01        56.15 
TCGA-13-0906 TCGA-13-0912 TCGA-13-0913 TCGA-13-0920 TCGA-13-1407 TCGA-13-1409 
       44.94        34.06        29.98        13.81         6.05         6.84 
TCGA-13-1477 TCGA-13-1482 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1492 
       54.61        61.71        22.39        70.82        82.88        73.55 
TCGA-13-1495 TCGA-13-1497 TCGA-13-1506 TCGA-13-2057 TCGA-13-2066 TCGA-20-0990 
       49.22        54.31         4.41        14.24         9.70        25.94 
TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-23-1021 TCGA-23-1022 
       25.38        19.07        16.67         2.93        47.54        42.51 
TCGA-23-1024 TCGA-23-1029 TCGA-23-1031 TCGA-23-1032 TCGA-23-1107 TCGA-23-1109 
       15.39         8.81        18.87         2.24         0.30        51.35 
TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1118 TCGA-23-1119 
       54.51         3.22        31.20        68.68        86.01       129.96 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1809 TCGA-23-2641 TCGA-23-2643 
        6.38        39.09        33.47         0.53         2.76         4.70 
TCGA-24-0979 TCGA-24-0982 TCGA-24-1103 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 
       41.56        22.32        54.08        47.41         6.31         6.38 
TCGA-24-1419 TCGA-24-1424 TCGA-24-1426 TCGA-24-1430 TCGA-24-1464 TCGA-24-1467 
        7.86         6.02         5.36        28.34        12.46       105.99 
TCGA-24-1469 TCGA-24-1474 TCGA-24-1544 TCGA-24-1548 TCGA-24-1550 TCGA-24-1552 
        9.11        22.19        26.96        16.21        41.06        41.39 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1565 
       88.50        70.62        39.88        19.53        44.09        10.26 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 TCGA-24-1844 TCGA-24-1850 TCGA-24-1920 
       17.23        90.15        48.33         3.72         5.49         9.80 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2024 TCGA-24-2027 TCGA-24-2030 TCGA-24-2033 
        4.87       151.99        58.16       109.68        53.95        18.48 
TCGA-24-2036 TCGA-24-2260 TCGA-24-2295 TCGA-24-2297 TCGA-25-1312 TCGA-25-1315 
       64.01        36.16        33.11        55.86         1.02        51.06 
TCGA-25-1316 TCGA-25-1317 TCGA-25-1319 TCGA-25-1321 TCGA-25-1323 TCGA-25-1324 
       37.02         1.02        65.00        33.96        12.00        34.03 
TCGA-25-1325 TCGA-25-1627 TCGA-25-1631 TCGA-25-1632 TCGA-25-1634 TCGA-25-1870 
       32.09         0.36         0.30        56.94        35.54        14.93 
TCGA-25-1871 TCGA-25-1877 TCGA-25-2393 TCGA-25-2400 TCGA-29-1691 TCGA-29-1696 
       24.99        18.05        38.04        42.02        47.18        33.70 
TCGA-29-1697 TCGA-29-1702 TCGA-29-1703 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 
       31.17        18.64        59.67        17.00        85.68        66.77 
TCGA-29-1774 TCGA-29-1778 TCGA-29-2414 TCGA-29-2425 TCGA-29-2431 TCGA-29-2434 
       17.29        14.93        86.17        65.00        42.25        11.47 
TCGA-30-1714 TCGA-30-1853 TCGA-30-1859 TCGA-30-1866 TCGA-31-1955 TCGA-36-1570 
       38.07        36.26        48.07        36.62        42.51        21.53 
TCGA-36-1571 TCGA-36-1575 TCGA-36-1577 TCGA-36-2537 TCGA-36-2544 TCGA-36-2547 
       22.85         8.55        25.74        25.91        20.98        20.52 
TCGA-36-2552 TCGA-42-2591 TCGA-57-1582 TCGA-57-1583 TCGA-57-1586 TCGA-57-1992 
       11.47        22.39        24.03        11.38        22.32        28.96 
TCGA-57-1993 TCGA-59-2349 TCGA-59-2350 TCGA-59-2352 TCGA-59-2363 TCGA-59-2372 
       25.05        80.12        22.32         9.40         5.39        44.78 
TCGA-61-1728 TCGA-61-1730 TCGA-61-1736 TCGA-61-1741 TCGA-61-1743 TCGA-61-1900 
       27.88         4.34        48.79        33.67        43.69         5.79 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2096 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
        4.77        51.72        58.39        65.49        55.50         6.48 
TCGA-61-2111 
      125.72 

$subtype3
TCGA-04-1336 TCGA-04-1343 TCGA-04-1346 TCGA-04-1348 TCGA-04-1349 TCGA-04-1361 
       49.15        11.87        65.49        48.76        21.57        32.52 
TCGA-04-1516 TCGA-04-1649 TCGA-04-1651 TCGA-04-1654 TCGA-09-0366 TCGA-09-0367 
       41.59        64.64        36.23        47.70        57.73        17.95 
TCGA-09-1659 TCGA-09-1662 TCGA-09-1665 TCGA-09-1667 TCGA-09-1668 TCGA-09-1670 
        9.96        89.33        41.59        61.87        55.36        17.98 
TCGA-09-1672 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2051 TCGA-09-2056 
        5.85         6.15         6.12        35.15        63.09        12.46 
TCGA-10-0937 TCGA-13-0714 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 
       15.12         6.21        44.55        39.58         2.73        12.39 
TCGA-13-0727 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 
       15.19        55.17         2.47        11.18        11.38        11.54 
TCGA-13-0764 TCGA-13-0765 TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 TCGA-13-0795 
       31.04        28.57        21.40        38.93        36.72        19.56 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 
        8.71         7.79         8.28        43.82        35.28        35.28 
TCGA-13-0807 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 
       13.61        91.40        74.27        66.64        61.81        67.99 
TCGA-13-0897 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0910 
       57.47        19.36        47.38        48.33        47.84        37.08 
TCGA-13-0911 TCGA-13-0916 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       27.68        21.14         4.64         6.41         6.08        10.88 
TCGA-13-1404 TCGA-13-1484 TCGA-13-1491 TCGA-13-1496 TCGA-13-1498 TCGA-13-1507 
        6.61        98.04        52.44         4.24        37.61         4.77 
TCGA-13-1510 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-20-0987 
        2.56        12.23         8.58        10.78         8.75        23.05 
TCGA-20-0991 TCGA-20-0996 TCGA-20-1687 TCGA-23-1028 TCGA-23-1030 TCGA-23-1120 
       26.20        72.20         2.66        49.41        29.10         4.27 
TCGA-23-1124 TCGA-23-2072 TCGA-23-2077 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
       58.13        24.95       115.89        91.66        77.00        49.84 
TCGA-23-2645 TCGA-23-2649 TCGA-24-0966 TCGA-24-0968 TCGA-24-0980 TCGA-24-1104 
        4.50         3.81         7.63        19.63         7.66        63.55 
TCGA-24-1417 TCGA-24-1423 TCGA-24-1428 TCGA-24-1431 TCGA-24-1466 TCGA-24-1470 
        7.82         6.25        17.36        19.17        45.14         3.42 
TCGA-24-1471 TCGA-24-1549 TCGA-24-1551 TCGA-24-1553 TCGA-24-1604 TCGA-24-1616 
        1.18        56.58        51.91        58.09        88.34        38.24 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1924 
        8.32         3.48         3.81         4.37        11.28        30.21 
TCGA-24-1927 TCGA-24-2023 TCGA-24-2026 TCGA-24-2038 TCGA-24-2261 TCGA-24-2267 
       16.41        44.84        34.82        44.48         0.79        47.54 
TCGA-24-2281 TCGA-24-2290 TCGA-25-1313 TCGA-25-1314 TCGA-25-1318 TCGA-25-1625 
       44.58        36.23        26.93        31.99        34.98        18.02 
TCGA-25-1878 TCGA-25-2391 TCGA-25-2392 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 
       85.05        49.05         1.02         3.02        12.00        19.99 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1699 TCGA-29-1701 TCGA-29-1707 TCGA-29-1711 
       26.96        78.87         0.53        16.90        41.95        34.62 
TCGA-29-1769 TCGA-29-1771 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 
       22.98        22.52        12.36        11.84        12.30         8.35 
TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 
        7.20         5.36        34.62        62.47        45.11         4.87 
TCGA-30-1856 TCGA-30-1860 TCGA-30-1880 TCGA-30-1887 TCGA-31-1944 TCGA-31-1950 
       15.68        44.91        57.57        24.26        45.57        18.77 
TCGA-31-1951 TCGA-31-1953 TCGA-36-1568 TCGA-36-1574 TCGA-36-1578 TCGA-36-1581 
       22.45         6.71        28.73        22.55        27.85        24.69 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2542 TCGA-36-2543 
       35.05        33.01        29.49        29.79        21.60         2.24 
TCGA-36-2545 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2589 TCGA-42-2590 
       18.31         6.05        16.14        26.04         7.56         7.46 
TCGA-57-1584 TCGA-57-1994 TCGA-59-2348 TCGA-59-2351 TCGA-59-2355 TCGA-61-1722 
       21.14        25.02       180.16       116.12         2.14         8.05 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1734 TCGA-61-1738 TCGA-61-1740 
       20.94        31.40        18.54        28.47        35.80         2.43 
TCGA-61-1895 TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 
        1.41         8.42        11.41        13.02         9.07        34.13 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 
       31.30        37.02        42.48        48.92        56.58        67.73 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 TCGA-61-2000 TCGA-61-2008 TCGA-61-2009 
       43.43        15.75         1.97        14.50        30.61        39.85 
TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2094 
       30.64         1.18        45.96        45.40         4.80        71.74 
TCGA-61-2097 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 
       60.62        76.83        20.68        44.52 

subtype1 subtype2 subtype3 
    0.26     0.30     0.53 
subtype1 subtype2 subtype3 
  119.08   151.99   180.16 
subtype1 subtype2 subtype3 
  26.350   31.860   24.985 
[1] "0.3 - 119.1 (26.4)" "0.3 - 152.0 (31.9)" "0.5 - 180.2 (25.0)"
  [1] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
  [7] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [13] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [25] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [37] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [43] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [55] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [61] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [67] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [79] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
 [85] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
 [97] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[103] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[109] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[127] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[133] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[139] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[163] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[169] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[175] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[187] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[205] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[217] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[235] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[241] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[253] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[259] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[271] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[289] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[295] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[301] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[307] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[313] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[319] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[325] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[331] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[337] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[343] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[349] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[355] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[361] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[367] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[379] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[385] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[391] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[403] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[409] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[415] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[427] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[433] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[439] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[445] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[451] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[457] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[463] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[469] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[475] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[481] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[487] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[493] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[499] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[505] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[511] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[517] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[523] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[529] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[535] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[541] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[547] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[553] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
  [1] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
  [7] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [13] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [25] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [37] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [43] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [55] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [61] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [67] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [79] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
 [85] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
 [97] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[103] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[109] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[127] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[133] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[139] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[163] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[169] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[175] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[187] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[205] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[217] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[235] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[241] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[253] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[259] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[271] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[289] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[295] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[301] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[307] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[313] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[319] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[325] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[331] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[337] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[343] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[349] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[355] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[361] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[367] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[379] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[385] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[391] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[403] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[409] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[415] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[427] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[433] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[439] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[445] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[451] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[457] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[463] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[469] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[475] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[481] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[487] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[493] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[499] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[505] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[511] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[517] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[523] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[529] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[535] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[541] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[547] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[553] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
  [1] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
  [7] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [13] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [25] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [37] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [43] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [49] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
 [55] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [61] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [67] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [79] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
 [85] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
 [91] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
 [97] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[103] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[109] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[121] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
[127] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[133] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[139] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[151] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[157] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[163] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[169] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[175] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[187] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[199] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[205] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[217] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[223] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[235] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[241] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[253] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[259] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[265] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[271] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[289] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[295] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[301] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[307] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[313] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[319] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[325] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[331] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[337] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[343] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[349] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[355] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[361] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[367] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[373] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[379] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[385] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[391] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[397] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[403] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[409] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[415] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[427] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[433] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[439] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[445] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[451] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[457] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[463] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[469] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[475] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[481] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[487] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[493] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[499] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[505] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[511] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[517] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[523] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[529] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[535] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[541] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[547] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[553] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
D2V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       1   130                1
  subtype2       0   214                0
  subtype3       1   214                1
D2V3, multiclass
D2V4, continuous
D2V5, binary
          cls
clus         0   1
  subtype1   0 132
  subtype2   2 212
  subtype3   1 215
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    0  132
  subtype2    2  212
  subtype3    1  215
     clus
vv    subtype1 subtype2 subtype3
  NO         0        2        1
  YES      132      212      215
          vv
clus       R0 R1 R2
  subtype1  1  8  1
  subtype2  7  7  0
  subtype3  6 12  0
D2V6, multiclass

Clustering(3) Variable = MIR_CNMF
D3V1, survival
          sevent
clus2        0   1
  subtype1  69  87
  subtype2  70  92
  subtype3 124 113
subtype1 subtype2 subtype3 
     156      162      237 
subtype1 subtype2 subtype3 
      87       92      113 
$subtype1
TCGA-04-1331 TCGA-04-1338 TCGA-04-1343 TCGA-04-1348 TCGA-04-1351 TCGA-04-1362 
       40.24        46.62        11.87        48.76        65.46        44.32 
TCGA-04-1516 TCGA-04-1530 TCGA-04-1542 TCGA-04-1644 TCGA-04-1649 TCGA-04-1651 
       41.59       119.08        84.20        48.89        64.64        36.23 
TCGA-09-1664 TCGA-09-1665 TCGA-09-1670 TCGA-09-1672 TCGA-09-1675 TCGA-09-2044 
       74.89        41.59        17.98         5.85        97.55         6.12 
TCGA-09-2056 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0936 TCGA-10-0938 
       12.46        33.24        32.28        11.70        35.80        19.86 
TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0758 TCGA-13-0760 TCGA-13-0791 
        2.73        12.39        31.07        11.38        11.54        38.93 
TCGA-13-0792 TCGA-13-0793 TCGA-13-0795 TCGA-13-0801 TCGA-13-0803 TCGA-13-0884 
       36.72        28.70        19.56         8.28        43.82       107.18 
TCGA-13-0885 TCGA-13-0886 TCGA-13-0893 TCGA-13-0903 TCGA-13-0911 TCGA-13-0919 
       91.40        74.27        43.36        47.38        27.68        14.89 
TCGA-13-0924 TCGA-13-1404 TCGA-13-1484 TCGA-13-1485 TCGA-13-1488 TCGA-13-1494 
        6.08         6.61        98.04        20.68        70.82        38.17 
TCGA-13-1500 TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 TCGA-13-2060 TCGA-13-2071 
       13.97         4.14         3.88         3.09         8.58         6.28 
TCGA-20-0987 TCGA-20-1686 TCGA-23-1024 TCGA-23-1028 TCGA-23-1032 TCGA-23-1116 
       23.05         2.93        15.39        49.41         2.24         4.57 
TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-2072 TCGA-23-2643 TCGA-24-0966 
       33.30        86.01       129.96        24.95         4.70         7.63 
TCGA-24-0970 TCGA-24-0979 TCGA-24-0980 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 
       11.64        41.56         7.66         6.31         6.38         7.82 
TCGA-24-1434 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 TCGA-24-1550 TCGA-24-1551 
       18.67         8.55        12.46        45.14        41.06        51.91 
TCGA-24-1552 TCGA-24-1557 TCGA-24-1563 TCGA-24-1565 TCGA-24-1842 TCGA-24-1844 
       41.39        39.88        47.70        10.26         8.32         3.72 
TCGA-24-1846 TCGA-24-1850 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2023 
        4.37         5.49        30.21        16.41        81.11        44.84 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2038 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 
       18.48        28.18        44.48         0.79         0.36        47.54 
TCGA-24-2281 TCGA-24-2289 TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1315 
       44.58        67.36        55.86        53.26        26.93        51.06 
TCGA-25-1320 TCGA-25-1322 TCGA-25-1329 TCGA-25-1623 TCGA-25-1627 TCGA-25-1628 
       36.95         2.99         2.96        18.58         0.36        20.58 
TCGA-25-1633 TCGA-25-1634 TCGA-25-2391 TCGA-25-2400 TCGA-25-2401 TCGA-25-2408 
       60.59        35.54        49.05        42.02         2.96        30.97 
TCGA-29-1688 TCGA-29-1694 TCGA-29-1695 TCGA-29-1698 TCGA-29-1702 TCGA-29-1711 
       78.87        38.53         0.79        68.28        18.64        34.62 
TCGA-29-1766 TCGA-29-1768 TCGA-29-2425 TCGA-29-2428 TCGA-30-1856 TCGA-30-1857 
       39.09        31.23        65.00        45.11        15.68         0.26 
TCGA-30-1869 TCGA-31-1946 TCGA-31-1959 TCGA-36-2529 TCGA-36-2534 TCGA-36-2537 
       51.39        30.18         2.17        35.05        29.79        25.91 
TCGA-36-2540 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-42-2582 TCGA-42-2587 
       23.80        20.52        14.17         6.05        26.04        23.74 
TCGA-42-2590 TCGA-42-2591 TCGA-57-1582 TCGA-57-1584 TCGA-57-1586 TCGA-57-1994 
        7.46        22.39        24.03        21.14        22.32        25.02 
TCGA-59-2350 TCGA-59-2351 TCGA-59-2354 TCGA-61-1724 TCGA-61-1895 TCGA-61-1903 
       22.32       116.12        34.39        20.94         1.41        13.02 
TCGA-61-1907 TCGA-61-1914 TCGA-61-1919 TCGA-61-2009 TCGA-61-2109 TCGA-61-2113 
       31.30        56.58        38.17        39.85        20.68        22.22 

$subtype2
TCGA-04-1332 TCGA-04-1335 TCGA-04-1337 TCGA-04-1346 TCGA-04-1361 TCGA-04-1514 
       41.00         1.81         2.01        65.49        32.52        56.55 
TCGA-04-1525 TCGA-04-1648 TCGA-04-1655 TCGA-09-0364 TCGA-09-0369 TCGA-09-1661 
       38.37        28.64        45.34        29.16        35.54        38.43 
TCGA-09-1669 TCGA-09-2043 TCGA-09-2055 TCGA-10-0925 TCGA-10-0927 TCGA-10-0937 
       30.48         6.15        26.93        54.31        81.47        15.12 
TCGA-13-0714 TCGA-13-0727 TCGA-13-0755 TCGA-13-0757 TCGA-13-0766 TCGA-13-0768 
        6.21        15.19         2.47        11.18        21.40         8.42 
TCGA-13-0800 TCGA-13-0805 TCGA-13-0807 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 
        8.12        35.28        13.61        70.39        61.81        67.99 
TCGA-13-0894 TCGA-13-0897 TCGA-13-0900 TCGA-13-0906 TCGA-13-0913 TCGA-13-1405 
       49.61        57.47        57.07        44.94        29.98         7.36 
TCGA-13-1411 TCGA-13-1412 TCGA-13-1481 TCGA-13-1483 TCGA-13-1487 TCGA-13-1495 
        4.21         5.33        87.06        29.39        22.39        49.22 
TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1510 TCGA-13-2057 TCGA-13-2059 
       32.84        16.57         4.21         2.56        14.24        12.23 
TCGA-20-1682 TCGA-20-1687 TCGA-23-1023 TCGA-23-1027 TCGA-23-1029 TCGA-23-1114 
       27.48         2.66        40.54        31.73         8.81        68.68 
TCGA-23-1120 TCGA-23-1809 TCGA-23-2077 TCGA-23-2647 TCGA-24-0968 TCGA-24-0975 
        4.27         0.53       115.89         4.44        19.63        21.80 
TCGA-24-0982 TCGA-24-1104 TCGA-24-1105 TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 
       22.32        63.55        47.41         0.76         6.25         5.95 
TCGA-24-1427 TCGA-24-1467 TCGA-24-1545 TCGA-24-1546 TCGA-24-1549 TCGA-24-1553 
        4.80       105.99        57.37        64.27        56.58        58.09 
TCGA-24-1562 TCGA-24-1567 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1847 
       45.50        17.23        88.34        48.33        38.24        11.28 
TCGA-24-1849 TCGA-24-1923 TCGA-24-2019 TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 
        5.75        22.65         4.87        58.16       109.68        14.43 
TCGA-24-2254 TCGA-24-2271 TCGA-24-2293 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 
       57.07        31.63        16.64        37.02         1.02        34.98 
TCGA-25-1321 TCGA-25-1323 TCGA-25-1326 TCGA-25-1328 TCGA-25-1625 TCGA-25-1626 
       33.96        12.00        31.04        65.06        18.02        15.78 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1635 TCGA-25-2042 TCGA-25-2396 TCGA-25-2398 
        7.86         0.30        51.22        13.02         3.02        45.01 
TCGA-25-2404 TCGA-29-1691 TCGA-29-1693 TCGA-29-1696 TCGA-29-1705 TCGA-29-1710 
       29.00        47.18       101.75        33.70        18.25        29.23 
TCGA-29-1763 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 TCGA-29-1778 
       66.77        24.36        22.52        17.29        11.84        14.93 
TCGA-29-1783 TCGA-29-2414 TCGA-29-2427 TCGA-29-2432 TCGA-29-2436 TCGA-30-1855 
        7.20        86.17        62.47        11.84         9.76         2.47 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1867 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 
       34.78         6.08         1.18        24.26        30.05        48.79 
TCGA-31-1944 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1574 
       45.57        42.51        44.09        28.73        29.06        22.55 
TCGA-36-1580 TCGA-36-2538 TCGA-36-2542 TCGA-42-2588 TCGA-57-1585 TCGA-57-1993 
       24.23        25.08        21.60         9.44         1.74        25.05 
TCGA-59-2352 TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 TCGA-61-1722 TCGA-61-1730 
        9.40         2.14         5.39        11.11         8.05         4.34 
TCGA-61-1736 TCGA-61-1899 TCGA-61-1901 TCGA-61-1904 TCGA-61-1906 TCGA-61-1998 
       48.79         8.42        11.41         9.07        34.13         5.52 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
       17.98         3.98        30.61         1.18        45.96        45.40 
TCGA-61-2095 TCGA-61-2097 TCGA-61-2101 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       61.64        60.62        55.50         6.35        31.07         8.58 

$subtype3
TCGA-04-1336 TCGA-04-1342 TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 
       49.15        18.51        63.06        21.57        63.98        49.28 
TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1369 TCGA-04-1371 TCGA-04-1517 
       33.67        76.54        71.47        21.11        82.36        19.99 
TCGA-04-1638 TCGA-04-1646 TCGA-04-1652 TCGA-04-1654 TCGA-09-0365 TCGA-09-0366 
       55.40        27.88        31.86        47.70         9.47        57.73 
TCGA-09-0367 TCGA-09-1659 TCGA-09-1662 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 
       17.95         9.96        89.33        57.57        61.87        55.36 
TCGA-09-1673 TCGA-09-1674 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 
        3.02         8.55        35.15         4.50       112.37        71.11 
TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-10-0926 TCGA-10-0928 TCGA-10-0934 
       63.09        39.75        20.91        25.91        18.48         3.88 
TCGA-10-0935 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0730 TCGA-13-0751 
       35.41        24.59        44.55        39.58        17.79        55.17 
TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0765 TCGA-13-0794 TCGA-13-0797 
       34.06        32.25        31.04        28.57        30.35         8.71 
TCGA-13-0799 TCGA-13-0802 TCGA-13-0804 TCGA-13-0883 TCGA-13-0887 TCGA-13-0891 
        7.79         8.19        35.28        68.91        66.64        69.01 
TCGA-13-0899 TCGA-13-0901 TCGA-13-0904 TCGA-13-0905 TCGA-13-0908 TCGA-13-0910 
       56.15        19.36        48.33        47.84        44.84        37.08 
TCGA-13-0912 TCGA-13-0916 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-1403 
       34.06        21.14        13.81         4.64         6.41        10.88 
TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1477 TCGA-13-1482 
        6.05         5.92         6.84         4.70        54.61        61.71 
TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
       82.88        52.44        73.55         4.24        54.31        37.61 
TCGA-13-1499 TCGA-13-1506 TCGA-13-1507 TCGA-13-2061 TCGA-13-2065 TCGA-13-2066 
       38.37         4.41         4.77        10.78         8.75         9.70 
TCGA-20-0990 TCGA-20-0991 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-23-1021 
       25.94        26.20        25.38        19.07        16.67        47.54 
TCGA-23-1022 TCGA-23-1026 TCGA-23-1030 TCGA-23-1031 TCGA-23-1107 TCGA-23-1109 
       42.51        26.83        29.10        18.87         0.30        51.35 
TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 
       54.51         3.22        31.20         6.38        39.09        33.47 
TCGA-23-1124 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
       58.13        87.48        91.66        77.00        49.84         2.76 
TCGA-23-2645 TCGA-23-2649 TCGA-24-1103 TCGA-24-1418 TCGA-24-1419 TCGA-24-1424 
        4.50         3.81        54.08         7.99         7.86         6.02 
TCGA-24-1426 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1435 TCGA-24-1463 
        5.36        17.36        28.34        19.17        43.53        72.92 
TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1548 
        9.11         3.42         1.18        22.19        26.96        16.21 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1558 TCGA-24-1560 TCGA-24-1564 TCGA-24-1603 
       88.50        70.62        19.53        44.09        25.87        90.15 
TCGA-24-1843 TCGA-24-1845 TCGA-24-1920 TCGA-24-1928 TCGA-24-2020 TCGA-24-2026 
        3.48         3.81         9.80        11.05       151.99        34.82 
TCGA-24-2030 TCGA-24-2036 TCGA-24-2260 TCGA-24-2280 TCGA-24-2288 TCGA-24-2290 
       53.95        64.01        36.16        70.45         0.82        36.23 
TCGA-24-2295 TCGA-25-1312 TCGA-25-1314 TCGA-25-1319 TCGA-25-1324 TCGA-25-1325 
       33.11         1.02        31.99        65.00        34.03        32.09 
TCGA-25-1632 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2392 
       56.94        14.93        24.99        18.05        85.05         1.02 
TCGA-25-2393 TCGA-25-2397 TCGA-25-2399 TCGA-25-2409 TCGA-29-1690 TCGA-29-1697 
       38.04        12.00        19.99        26.96        44.71        31.17 
TCGA-29-1699 TCGA-29-1701 TCGA-29-1703 TCGA-29-1707 TCGA-29-1761 TCGA-29-1762 
        0.53        16.90        59.67        41.95        17.00        85.68 
TCGA-29-1764 TCGA-29-1769 TCGA-29-1775 TCGA-29-1777 TCGA-29-1781 TCGA-29-1784 
       62.93        22.98        12.36        12.30         8.35         5.36 
TCGA-29-1785 TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-30-1714 TCGA-30-1718 
       34.62         4.87        42.25        11.47        38.07        51.91 
TCGA-30-1853 TCGA-30-1859 TCGA-30-1860 TCGA-30-1866 TCGA-30-1880 TCGA-31-1950 
       36.26        48.07        44.91        36.62        57.57        18.77 
TCGA-31-1951 TCGA-31-1953 TCGA-36-1570 TCGA-36-1571 TCGA-36-1575 TCGA-36-1576 
       22.45         6.71        21.53        22.85         8.55        30.05 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2543 
       25.74        27.85        24.69        33.01        29.49         2.24 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2551 TCGA-36-2552 TCGA-42-2589 TCGA-57-1583 
       20.98        18.31        16.14        11.47         7.56        11.38 
TCGA-57-1992 TCGA-59-2348 TCGA-59-2349 TCGA-59-2372 TCGA-61-1725 TCGA-61-1727 
       28.96       180.16        80.12        44.78        31.40        18.54 
TCGA-61-1728 TCGA-61-1733 TCGA-61-1734 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 
       27.88        31.76        28.47        44.84        35.80         2.43 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1900 TCGA-61-1910 TCGA-61-1913 TCGA-61-1915 
       33.67        43.69         5.79        37.02        48.92        67.73 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 TCGA-61-2000 TCGA-61-2012 TCGA-61-2087 
       43.43        15.75         1.97        14.50        30.64         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2096 TCGA-61-2098 TCGA-61-2102 
        4.77        51.72        71.74        58.39        65.49         6.48 
TCGA-61-2104 TCGA-61-2110 TCGA-61-2111 
       76.83        44.52       125.72 

subtype1 subtype2 subtype3 
    0.26     0.30     0.30 
subtype1 subtype2 subtype3 
  129.96   115.89   180.16 
subtype1 subtype2 subtype3 
  26.485   24.705   30.050 
[1] "0.3 - 130.0 (26.5)" "0.3 - 115.9 (24.7)" "0.3 - 180.2 (30.1)"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
  [7] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [13] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [19] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [25] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [31] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [49] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [55] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
 [61] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [73] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
 [79] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [91] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[109] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[121] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[133] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[145] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[163] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[169] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[175] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[187] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[199] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[205] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[217] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[223] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[229] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[235] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[241] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[247] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[259] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[271] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[277] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[289] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[301] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[307] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[319] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[325] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[331] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[343] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[355] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype2"
[361] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[367] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[373] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[379] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[385] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[391] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[403] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[409] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[415] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[421] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[427] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[433] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[439] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[445] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[451] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[457] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[463] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[469] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[475] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[481] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[487] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[493] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[499] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[505] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[511] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[517] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[523] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[529] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[535] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[541] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[547] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[553] "subtype2" "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
  [7] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [13] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [19] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [25] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [31] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [49] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [55] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
 [61] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [73] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
 [79] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [91] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[109] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[121] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[133] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[145] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[163] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[169] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[175] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[187] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[199] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[205] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[217] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[223] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[229] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[235] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[241] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[247] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[259] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[271] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[277] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[289] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[301] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[307] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[319] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[325] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[331] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[343] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[355] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype2"
[361] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[367] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[373] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[379] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[385] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[391] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[403] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[409] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[415] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[421] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[427] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[433] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[439] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[445] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[451] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[457] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[463] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[469] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[475] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[481] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[487] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[493] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[499] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[505] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[511] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[517] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[523] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[529] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[535] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[541] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[547] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[553] "subtype2" "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
  [7] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [13] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
 [19] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
 [25] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [31] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
 [49] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [55] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
 [61] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
 [73] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
 [79] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [91] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [97] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[109] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[121] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[133] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[139] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[145] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[151] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[157] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[163] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[169] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[175] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[181] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[187] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[193] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[199] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[205] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[217] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[223] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[229] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
[235] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[241] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[247] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[259] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[271] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[277] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[283] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[289] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[301] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[307] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[319] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[325] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[331] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[337] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[343] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[349] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[355] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype2"
[361] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[367] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[373] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[379] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[385] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[391] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[397] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[403] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[409] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[415] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[421] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[427] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[433] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[439] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[445] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[451] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[457] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[463] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[469] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[475] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[481] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[487] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[493] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[499] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[505] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[511] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[517] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[523] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[529] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[535] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[541] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[547] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[553] "subtype2" "subtype2" "subtype2"
D3V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       0   155                2
  subtype2       1   164                0
  subtype3       1   237                0
D3V3, multiclass
D3V4, continuous
D3V5, binary
          cls
clus         0   1
  subtype1   0 157
  subtype2   0 165
  subtype3   3 235
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    0  157
  subtype2    0  165
  subtype3    3  235
     clus
vv    subtype1 subtype2 subtype3
  NO         0        0        3
  YES      157      165      235
          vv
clus       R0 R1 R2
  subtype1  4 12  0
  subtype2  3  9  1
  subtype3  7  6  0
D3V6, multiclass

Clustering(4) Variable = MIR_CHIERARCHICAL
D4V1, survival
          sevent
clus2       0  1
  subtype1 34 31
  subtype2 53 66
  subtype3 56 66
  subtype4 56 46
  subtype5 23 31
  subtype6 41 52
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      65      119      122      102       54       93 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      31       66       66       46       31       52 
$subtype1
TCGA-04-1525 TCGA-09-0367 TCGA-09-1664 TCGA-09-1675 TCGA-09-2045 TCGA-09-2055 
       38.37        17.95        74.89        97.55        35.15        26.93 
TCGA-10-0925 TCGA-10-0928 TCGA-10-0936 TCGA-10-0938 TCGA-13-0720 TCGA-13-0751 
       54.31        18.48        35.80        19.86        44.55        55.17 
TCGA-13-0755 TCGA-13-0764 TCGA-13-0912 TCGA-13-0913 TCGA-13-0920 TCGA-13-1477 
        2.47        31.04        34.06        29.98        13.81        54.61 
TCGA-13-1489 TCGA-13-1499 TCGA-13-2059 TCGA-20-1684 TCGA-20-1685 TCGA-23-1021 
       82.88        38.37        12.23        19.07        16.67        47.54 
TCGA-23-2077 TCGA-23-2084 TCGA-23-2641 TCGA-23-2649 TCGA-24-0966 TCGA-24-0979 
      115.89        49.84         2.76         3.81         7.63        41.56 
TCGA-24-1103 TCGA-24-1413 TCGA-24-1426 TCGA-24-1471 TCGA-24-1555 TCGA-24-1844 
       54.08         6.31         5.36         1.18        88.50         3.72 
TCGA-24-1923 TCGA-24-2019 TCGA-24-2036 TCGA-25-1321 TCGA-25-1625 TCGA-25-1632 
       22.65         4.87        64.01        33.96        18.02        56.94 
TCGA-25-1870 TCGA-25-1878 TCGA-29-1695 TCGA-29-1771 TCGA-29-1783 TCGA-29-2425 
       14.93        85.05         0.79        22.52         7.20        65.00 
TCGA-36-1570 TCGA-36-1571 TCGA-36-2538 TCGA-42-2582 TCGA-61-1721 TCGA-61-1728 
       21.53        22.85        25.08        26.04        11.11        27.88 
TCGA-61-1734 TCGA-61-1736 TCGA-61-1899 TCGA-61-1901 TCGA-61-1904 TCGA-61-1906 
       28.47        48.79         8.42        11.41         9.07        34.13 
TCGA-61-1918 TCGA-61-2008 TCGA-61-2018 TCGA-61-2096 TCGA-61-2102 
       15.75        30.61        45.40        58.39         6.48 

$subtype2
TCGA-04-1346 TCGA-09-0366 TCGA-10-0937 TCGA-13-0714 TCGA-13-0725 TCGA-13-0727 
       65.49        57.73        15.12         6.21        12.39        15.19 
TCGA-13-0761 TCGA-13-0766 TCGA-13-0768 TCGA-13-0792 TCGA-13-0793 TCGA-13-0803 
       34.06        21.40         8.42        36.72        28.70        43.82 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0889 
       35.28        13.61        68.91       107.18        91.40        61.81 
TCGA-13-0890 TCGA-13-0893 TCGA-13-0894 TCGA-13-0897 TCGA-13-0900 TCGA-13-0903 
       67.99        43.36        49.61        57.47        57.07        47.38 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0924 TCGA-13-1405 TCGA-13-1411 TCGA-13-1412 
       44.84        37.08         6.08         7.36         4.21         5.33 
TCGA-13-1481 TCGA-13-1483 TCGA-13-1495 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 
       87.06        29.39        49.22        32.84        16.57         4.21 
TCGA-13-1510 TCGA-20-1682 TCGA-20-1687 TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 
        2.56        27.48         2.66        40.54        26.83        31.73 
TCGA-23-2647 TCGA-24-0968 TCGA-24-0975 TCGA-24-1104 TCGA-24-1105 TCGA-24-1423 
        4.44        19.63        21.80        63.55        47.41         6.25 
TCGA-24-1425 TCGA-24-1427 TCGA-24-1428 TCGA-24-1434 TCGA-24-1463 TCGA-24-1470 
        5.95         4.80        17.36        18.67        72.92         3.42 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1553 TCGA-24-1562 TCGA-24-1564 TCGA-24-1604 
       57.37        64.27        58.09        45.50        25.87        88.34 
TCGA-24-1847 TCGA-24-1849 TCGA-24-2024 TCGA-24-2035 TCGA-24-2271 TCGA-24-2293 
       11.28         5.75        58.16        28.18        31.63        16.64 
TCGA-25-1318 TCGA-25-1325 TCGA-25-1326 TCGA-25-1328 TCGA-25-1623 TCGA-25-1626 
       34.98        32.09        31.04        65.06        18.58        15.78 
TCGA-25-2042 TCGA-25-2392 TCGA-25-2399 TCGA-25-2401 TCGA-25-2404 TCGA-25-2409 
       13.02         1.02        19.99         2.96        29.00        26.96 
TCGA-29-1691 TCGA-29-1693 TCGA-29-1698 TCGA-29-1705 TCGA-29-1710 TCGA-29-1764 
       47.18       101.75        68.28        18.25        29.23        62.93 
TCGA-29-1766 TCGA-29-1770 TCGA-29-1776 TCGA-29-2427 TCGA-29-2432 TCGA-29-2436 
       39.09        24.36        11.84        62.47        11.84         9.76 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1861 TCGA-30-1862 TCGA-30-1867 TCGA-30-1869 
        2.47        15.68        34.78         6.08         1.18        51.39 
TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1951 TCGA-31-1956 
       24.26        30.05        48.79        45.57        22.45        44.09 
TCGA-36-1568 TCGA-36-1569 TCGA-36-2542 TCGA-36-2543 TCGA-42-2588 TCGA-57-1585 
       28.73        29.06        21.60         2.24         9.44         1.74 
TCGA-59-2348 TCGA-61-1725 TCGA-61-1740 TCGA-61-2002 TCGA-61-2003 TCGA-61-2016 
      180.16        31.40         2.43        17.98         3.98         1.18 
TCGA-61-2017 TCGA-61-2101 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       45.96        55.50         6.35        31.07         8.58 

$subtype3
TCGA-04-1331 TCGA-04-1348 TCGA-04-1351 TCGA-04-1361 TCGA-04-1362 TCGA-04-1516 
       40.24        48.76        65.46        32.52        44.32        41.59 
TCGA-04-1530 TCGA-04-1542 TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 
      119.08        84.20        48.89        28.64        64.64        36.23 
TCGA-09-1661 TCGA-09-1665 TCGA-09-1670 TCGA-09-1672 TCGA-09-2044 TCGA-10-0931 
       38.43        41.59        17.98         5.85         6.12        32.28 
TCGA-13-0724 TCGA-13-0726 TCGA-13-0760 TCGA-13-0791 TCGA-13-0795 TCGA-13-0801 
        2.73        31.07        11.54        38.93        19.56         8.28 
TCGA-13-0886 TCGA-13-0911 TCGA-13-0919 TCGA-13-0921 TCGA-13-1404 TCGA-13-1485 
       74.27        27.68        14.89         4.64         6.61        20.68 
TCGA-13-1494 TCGA-13-1500 TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 TCGA-13-2060 
       38.17        13.97         4.14         3.88         3.09         8.58 
TCGA-13-2071 TCGA-20-0987 TCGA-20-1686 TCGA-23-1024 TCGA-23-1028 TCGA-23-1116 
        6.28        23.05         2.93        15.39        49.41         4.57 
TCGA-23-1117 TCGA-23-1119 TCGA-23-1120 TCGA-23-2072 TCGA-23-2643 TCGA-24-0970 
       33.30       129.96         4.27        24.95         4.70        11.64 
TCGA-24-0980 TCGA-24-1416 TCGA-24-1464 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 
        7.66         6.38        12.46        41.06        51.91        41.39 
TCGA-24-1557 TCGA-24-1563 TCGA-24-1565 TCGA-24-1616 TCGA-24-1843 TCGA-24-1846 
       39.88        47.70        10.26        38.24         3.48         4.37 
TCGA-24-1850 TCGA-24-1928 TCGA-24-1930 TCGA-24-2023 TCGA-24-2033 TCGA-24-2038 
        5.49        11.05        81.11        44.84        18.48        44.48 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2281 
       57.07        36.16         0.79         0.36        47.54        44.58 
TCGA-24-2289 TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1320 TCGA-25-1322 
       67.36        55.86        53.26        26.93        36.95         2.99 
TCGA-25-1329 TCGA-25-1627 TCGA-25-1628 TCGA-25-1631 TCGA-25-1633 TCGA-25-2391 
        2.96         0.36        20.58         0.30        60.59        49.05 
TCGA-25-2400 TCGA-25-2408 TCGA-29-1694 TCGA-29-1711 TCGA-29-1768 TCGA-29-2428 
       42.02        30.97        38.53        34.62        31.23        45.11 
TCGA-30-1857 TCGA-31-1946 TCGA-31-1955 TCGA-31-1959 TCGA-36-1580 TCGA-36-2529 
        0.26        30.18        42.51         2.17        24.23        35.05 
TCGA-36-2537 TCGA-36-2540 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-42-2587 
       25.91        23.80        20.52        14.17         6.05        23.74 
TCGA-42-2590 TCGA-42-2591 TCGA-57-1582 TCGA-57-1993 TCGA-57-1994 TCGA-59-2351 
        7.46        22.39        24.03        25.05        25.02       116.12 
TCGA-59-2354 TCGA-59-2355 TCGA-61-1722 TCGA-61-1724 TCGA-61-1895 TCGA-61-1914 
       34.39         2.14         8.05        20.94         1.41        56.58 
TCGA-61-1919 TCGA-61-1998 TCGA-61-2009 TCGA-61-2094 TCGA-61-2095 TCGA-61-2097 
       38.17         5.52        39.85        71.74        61.64        60.62 
TCGA-61-2109 TCGA-61-2113 
       20.68        22.22 

$subtype4
TCGA-04-1336 TCGA-04-1349 TCGA-04-1356 TCGA-04-1365 TCGA-04-1367 TCGA-04-1369 
       49.15        21.57        49.28        76.54        71.47        21.11 
TCGA-04-1646 TCGA-04-1654 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1673 
       27.88        47.70        57.57        61.87        55.36         3.02 
TCGA-09-2043 TCGA-09-2051 TCGA-09-2056 TCGA-10-0930 TCGA-10-0934 TCGA-13-0723 
        6.15        63.09        12.46        33.24         3.88        39.58 
TCGA-13-0758 TCGA-13-0765 TCGA-13-0797 TCGA-13-0804 TCGA-13-0887 TCGA-13-0891 
       11.38        28.57         8.71        35.28        66.64        69.01 
TCGA-13-0901 TCGA-13-0904 TCGA-13-0905 TCGA-13-0916 TCGA-13-0923 TCGA-13-1403 
       19.36        48.33        47.84        21.14         6.41        10.88 
TCGA-13-1410 TCGA-13-1482 TCGA-13-1484 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
        4.70        61.71        98.04         4.24        54.31        37.61 
TCGA-13-1507 TCGA-13-2061 TCGA-13-2065 TCGA-13-2066 TCGA-20-0991 TCGA-20-1683 
        4.77        10.78         8.75         9.70        26.20        25.38 
TCGA-23-1032 TCGA-23-1107 TCGA-23-1123 TCGA-23-1124 TCGA-23-2078 TCGA-23-2079 
        2.24         0.30        33.47        58.13        87.48        91.66 
TCGA-23-2081 TCGA-24-1417 TCGA-24-1436 TCGA-24-1466 TCGA-24-1469 TCGA-24-1474 
       77.00         7.82         8.55        45.14         9.11        22.19 
TCGA-24-1544 TCGA-24-1548 TCGA-24-1549 TCGA-24-1560 TCGA-24-1924 TCGA-24-1927 
       26.96        16.21        56.58        44.09        30.21        16.41 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2288 TCGA-24-2290 TCGA-24-2295 TCGA-25-1314 
       14.43        53.95         0.82        36.23        33.11        31.99 
TCGA-25-1315 TCGA-25-1319 TCGA-25-1635 TCGA-25-2397 TCGA-29-1688 TCGA-29-1699 
       51.06        65.00        51.22        12.00        78.87         0.53 
TCGA-29-1707 TCGA-29-1781 TCGA-29-2429 TCGA-29-2434 TCGA-30-1860 TCGA-30-1866 
       41.95         8.35         4.87        11.47        44.91        36.62 
TCGA-30-1880 TCGA-31-1950 TCGA-31-1953 TCGA-36-1578 TCGA-36-1581 TCGA-36-2530 
       57.57        18.77         6.71        27.85        24.69        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2545 TCGA-36-2551 TCGA-42-2589 TCGA-59-2349 
       29.49        29.79        18.31        16.14         7.56        80.12 
TCGA-59-2350 TCGA-61-1727 TCGA-61-1738 TCGA-61-1903 TCGA-61-1907 TCGA-61-1910 
       22.32        18.54        35.80        13.02        31.30        37.02 
TCGA-61-1913 TCGA-61-2000 TCGA-61-2012 TCGA-61-2087 TCGA-61-2092 TCGA-61-2111 
       48.92        14.50        30.64         4.80        51.72       125.72 

$subtype5
TCGA-04-1332 TCGA-04-1335 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 TCGA-04-1343 
       41.00         1.81         2.01        46.62        18.51        11.87 
TCGA-04-1347 TCGA-04-1517 TCGA-04-1638 TCGA-04-1652 TCGA-09-1662 TCGA-09-2053 
       63.06        19.99        55.40        31.86        89.33        39.75 
TCGA-13-0799 TCGA-13-1487 TCGA-13-1488 TCGA-13-1506 TCGA-23-1029 TCGA-23-1031 
        7.79        22.39        70.82         4.41         8.81        18.87 
TCGA-23-1109 TCGA-23-1111 TCGA-23-1113 TCGA-23-1118 TCGA-24-0982 TCGA-24-1418 
       51.35         3.22        31.20        86.01        22.32         7.99 
TCGA-24-1419 TCGA-24-1430 TCGA-24-1467 TCGA-24-1556 TCGA-24-1558 TCGA-24-1614 
        7.86        28.34       105.99        70.62        19.53        48.33 
TCGA-24-1842 TCGA-24-1845 TCGA-24-1920 TCGA-24-2026 TCGA-25-1630 TCGA-25-2396 
        8.32         3.81         9.80        34.82         7.86         3.02 
TCGA-29-1696 TCGA-29-1701 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1769 
       33.70        16.90        17.00        85.68        66.77        22.98 
TCGA-29-1774 TCGA-29-1784 TCGA-29-1785 TCGA-30-1714 TCGA-30-1718 TCGA-36-1574 
       17.29         5.36        34.62        38.07        51.91        22.55 
TCGA-36-1575 TCGA-57-1583 TCGA-57-1584 TCGA-57-1586 TCGA-61-1733 TCGA-61-2104 
        8.55        11.38        21.14        22.32        31.76        76.83 

$subtype6
TCGA-04-1350 TCGA-04-1364 TCGA-04-1371 TCGA-04-1514 TCGA-04-1655 TCGA-09-0364 
       63.98        33.67        82.36        56.55        45.34        29.16 
TCGA-09-0365 TCGA-09-0369 TCGA-09-1659 TCGA-09-1669 TCGA-09-1674 TCGA-09-2048 
        9.47        35.54         9.96        30.48         8.55         4.50 
TCGA-09-2049 TCGA-09-2050 TCGA-09-2054 TCGA-10-0926 TCGA-10-0927 TCGA-10-0933 
      112.37        71.11        20.91        25.91        81.47        11.70 
TCGA-10-0935 TCGA-13-0717 TCGA-13-0730 TCGA-13-0757 TCGA-13-0762 TCGA-13-0794 
       35.41        24.59        17.79        11.18        32.25        30.35 
TCGA-13-0800 TCGA-13-0802 TCGA-13-0888 TCGA-13-0899 TCGA-13-0906 TCGA-13-1407 
        8.12         8.19        70.39        56.15        44.94         6.05 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1491 TCGA-13-1492 TCGA-13-2057 TCGA-20-0990 
        5.92         6.84        52.44        73.55        14.24        25.94 
TCGA-23-1022 TCGA-23-1030 TCGA-23-1110 TCGA-23-1114 TCGA-23-1121 TCGA-23-1122 
       42.51        29.10        54.51        68.68         6.38        39.09 
TCGA-23-1809 TCGA-23-2645 TCGA-24-1422 TCGA-24-1424 TCGA-24-1431 TCGA-24-1435 
        0.53         4.50         0.76         6.02        19.17        43.53 
TCGA-24-1567 TCGA-24-1603 TCGA-24-2020 TCGA-24-2027 TCGA-24-2280 TCGA-25-1312 
       17.23        90.15       151.99       109.68        70.45         1.02 
TCGA-25-1316 TCGA-25-1317 TCGA-25-1323 TCGA-25-1324 TCGA-25-1634 TCGA-25-1871 
       37.02         1.02        12.00        34.03        35.54        24.99 
TCGA-25-1877 TCGA-25-2393 TCGA-25-2398 TCGA-29-1690 TCGA-29-1697 TCGA-29-1702 
       18.05        38.04        45.01        44.71        31.17        18.64 
TCGA-29-1703 TCGA-29-1775 TCGA-29-1777 TCGA-29-1778 TCGA-29-2414 TCGA-29-2431 
       59.67        12.36        12.30        14.93        86.17        42.25 
TCGA-30-1853 TCGA-30-1859 TCGA-36-1576 TCGA-36-1577 TCGA-36-2544 TCGA-36-2552 
       36.26        48.07        30.05        25.74        20.98        11.47 
TCGA-57-1992 TCGA-59-2352 TCGA-59-2363 TCGA-59-2372 TCGA-61-1730 TCGA-61-1737 
       28.96         9.40         5.39        44.78         4.34        44.84 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1900 TCGA-61-1915 TCGA-61-1917 TCGA-61-1995 
       33.67        43.69         5.79        67.73        43.43         1.97 
TCGA-61-2088 TCGA-61-2098 TCGA-61-2110 
        4.77        65.49        44.52 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    0.79     1.02     0.26     0.30     1.81     0.53 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  115.89   180.16   129.96   125.72   105.99   151.99 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  26.930   28.700   25.480   29.640   22.355   30.350 
[1] "0.8 - 115.9 (26.9)" "1.0 - 180.2 (28.7)" "0.3 - 130.0 (25.5)"
[4] "0.3 - 125.7 (29.6)" "1.8 - 106.0 (22.4)" "0.5 - 152.0 (30.4)"
  [1] "subtype3" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
  [7] "subtype5" "subtype5" "subtype2" "subtype5" "subtype3" "subtype4"
 [13] "subtype6" "subtype3" "subtype4" "subtype3" "subtype3" "subtype6"
 [19] "subtype4" "subtype4" "subtype4" "subtype6" "subtype6" "subtype3"
 [25] "subtype5" "subtype1" "subtype3" "subtype3" "subtype5" "subtype3"
 [31] "subtype4" "subtype3" "subtype3" "subtype3" "subtype5" "subtype4"
 [37] "subtype6" "subtype6" "subtype6" "subtype2" "subtype1" "subtype6"
 [43] "subtype6" "subtype3" "subtype5" "subtype1" "subtype3" "subtype4"
 [49] "subtype4" "subtype4" "subtype6" "subtype3" "subtype3" "subtype4"
 [55] "subtype6" "subtype1" "subtype4" "subtype3" "subtype1" "subtype6"
 [61] "subtype6" "subtype6" "subtype4" "subtype5" "subtype6" "subtype1"
 [67] "subtype4" "subtype1" "subtype6" "subtype6" "subtype1" "subtype4"
 [73] "subtype3" "subtype6" "subtype4" "subtype6" "subtype1" "subtype2"
 [79] "subtype1" "subtype2" "subtype6" "subtype1" "subtype4" "subtype3"
 [85] "subtype2" "subtype3" "subtype2" "subtype6" "subtype1" "subtype1"
 [91] "subtype6" "subtype4" "subtype3" "subtype2" "subtype6" "subtype1"
 [97] "subtype4" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[103] "subtype6" "subtype3" "subtype4" "subtype5" "subtype6" "subtype3"
[109] "subtype6" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype3" "subtype4" "subtype6" "subtype2"
[121] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype6"
[127] "subtype2" "subtype4" "subtype2" "subtype4" "subtype4" "subtype6"
[133] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype4"
[139] "subtype3" "subtype1" "subtype3" "subtype4" "subtype2" "subtype4"
[145] "subtype3" "subtype2" "subtype6" "subtype6" "subtype6" "subtype4"
[151] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype2"
[157] "subtype4" "subtype3" "subtype5" "subtype5" "subtype1" "subtype6"
[163] "subtype6" "subtype3" "subtype2" "subtype4" "subtype4" "subtype4"
[169] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype5"
[175] "subtype4" "subtype3" "subtype2" "subtype3" "subtype3" "subtype6"
[181] "subtype1" "subtype3" "subtype4" "subtype4" "subtype4" "subtype3"
[187] "subtype3" "subtype6" "subtype4" "subtype2" "subtype4" "subtype1"
[193] "subtype1" "subtype3" "subtype2" "subtype1" "subtype6" "subtype2"
[199] "subtype3" "subtype2" "subtype2" "subtype3" "subtype5" "subtype6"
[205] "subtype5" "subtype4" "subtype4" "subtype5" "subtype6" "subtype5"
[211] "subtype5" "subtype6" "subtype3" "subtype3" "subtype5" "subtype3"
[217] "subtype3" "subtype6" "subtype6" "subtype4" "subtype4" "subtype6"
[223] "subtype3" "subtype1" "subtype4" "subtype4" "subtype4" "subtype1"
[229] "subtype1" "subtype3" "subtype6" "subtype2" "subtype1" "subtype1"
[235] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype5"
[241] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype4"
[247] "subtype5" "subtype5" "subtype6" "subtype2" "subtype6" "subtype2"
[253] "subtype1" "subtype2" "subtype2" "subtype5" "subtype6" "subtype2"
[259] "subtype6" "subtype4" "subtype2" "subtype3" "subtype4" "subtype5"
[265] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype2"
[271] "subtype2" "subtype4" "subtype4" "subtype3" "subtype3" "subtype3"
[277] "subtype2" "subtype1" "subtype5" "subtype3" "subtype5" "subtype4"
[283] "subtype2" "subtype3" "subtype2" "subtype3" "subtype6" "subtype6"
[289] "subtype2" "subtype5" "subtype3" "subtype5" "subtype3" "subtype1"
[295] "subtype5" "subtype3" "subtype2" "subtype2" "subtype3" "subtype5"
[301] "subtype1" "subtype4" "subtype4" "subtype3" "subtype3" "subtype1"
[307] "subtype6" "subtype3" "subtype2" "subtype5" "subtype6" "subtype4"
[313] "subtype4" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[319] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype6"
[325] "subtype3" "subtype4" "subtype3" "subtype4" "subtype2" "subtype4"
[331] "subtype3" "subtype3" "subtype6" "subtype3" "subtype4" "subtype4"
[337] "subtype6" "subtype6" "subtype2" "subtype4" "subtype3" "subtype1"
[343] "subtype3" "subtype6" "subtype6" "subtype2" "subtype2" "subtype2"
[349] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[355] "subtype5" "subtype3" "subtype1" "subtype3" "subtype6" "subtype4"
[361] "subtype1" "subtype6" "subtype6" "subtype1" "subtype2" "subtype3"
[367] "subtype2" "subtype6" "subtype5" "subtype4" "subtype6" "subtype2"
[373] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype4"
[379] "subtype6" "subtype2" "subtype2" "subtype3" "subtype1" "subtype5"
[385] "subtype6" "subtype2" "subtype4" "subtype5" "subtype6" "subtype6"
[391] "subtype2" "subtype4" "subtype2" "subtype3" "subtype5" "subtype5"
[397] "subtype5" "subtype2" "subtype2" "subtype3" "subtype5" "subtype2"
[403] "subtype1" "subtype5" "subtype6" "subtype2" "subtype6" "subtype6"
[409] "subtype4" "subtype1" "subtype5" "subtype5" "subtype6" "subtype1"
[415] "subtype2" "subtype3" "subtype4" "subtype6" "subtype2" "subtype4"
[421] "subtype2" "subtype5" "subtype5" "subtype6" "subtype2" "subtype2"
[427] "subtype3" "subtype6" "subtype4" "subtype2" "subtype2" "subtype4"
[433] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[439] "subtype2" "subtype3" "subtype4" "subtype2" "subtype4" "subtype3"
[445] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[451] "subtype5" "subtype5" "subtype6" "subtype6" "subtype4" "subtype3"
[457] "subtype4" "subtype3" "subtype4" "subtype4" "subtype4" "subtype3"
[463] "subtype1" "subtype3" "subtype2" "subtype2" "subtype6" "subtype4"
[469] "subtype3" "subtype3" "subtype3" "subtype4" "subtype6" "subtype1"
[475] "subtype3" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[481] "subtype5" "subtype5" "subtype2" "subtype5" "subtype6" "subtype3"
[487] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype6"
[493] "subtype3" "subtype3" "subtype6" "subtype6" "subtype1" "subtype3"
[499] "subtype3" "subtype2" "subtype4" "subtype1" "subtype6" "subtype5"
[505] "subtype1" "subtype1" "subtype6" "subtype4" "subtype2" "subtype6"
[511] "subtype6" "subtype3" "subtype1" "subtype6" "subtype1" "subtype4"
[517] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype3"
[523] "subtype6" "subtype6" "subtype1" "subtype3" "subtype6" "subtype3"
[529] "subtype4" "subtype2" "subtype2" "subtype1" "subtype3" "subtype4"
[535] "subtype2" "subtype2" "subtype1" "subtype4" "subtype6" "subtype4"
[541] "subtype3" "subtype3" "subtype1" "subtype3" "subtype6" "subtype2"
[547] "subtype1" "subtype5" "subtype3" "subtype6" "subtype4" "subtype3"
[553] "subtype2" "subtype2" "subtype2"
  [1] "subtype3" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
  [7] "subtype5" "subtype5" "subtype2" "subtype5" "subtype3" "subtype4"
 [13] "subtype6" "subtype3" "subtype4" "subtype3" "subtype3" "subtype6"
 [19] "subtype4" "subtype4" "subtype4" "subtype6" "subtype6" "subtype3"
 [25] "subtype5" "subtype1" "subtype3" "subtype3" "subtype5" "subtype3"
 [31] "subtype4" "subtype3" "subtype3" "subtype3" "subtype5" "subtype4"
 [37] "subtype6" "subtype6" "subtype6" "subtype2" "subtype1" "subtype6"
 [43] "subtype6" "subtype3" "subtype5" "subtype1" "subtype3" "subtype4"
 [49] "subtype4" "subtype4" "subtype6" "subtype3" "subtype3" "subtype4"
 [55] "subtype6" "subtype1" "subtype4" "subtype3" "subtype1" "subtype6"
 [61] "subtype6" "subtype6" "subtype4" "subtype5" "subtype6" "subtype1"
 [67] "subtype4" "subtype1" "subtype6" "subtype6" "subtype1" "subtype4"
 [73] "subtype3" "subtype6" "subtype4" "subtype6" "subtype1" "subtype2"
 [79] "subtype1" "subtype2" "subtype6" "subtype1" "subtype4" "subtype3"
 [85] "subtype2" "subtype3" "subtype2" "subtype6" "subtype1" "subtype1"
 [91] "subtype6" "subtype4" "subtype3" "subtype2" "subtype6" "subtype1"
 [97] "subtype4" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[103] "subtype6" "subtype3" "subtype4" "subtype5" "subtype6" "subtype3"
[109] "subtype6" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype3" "subtype4" "subtype6" "subtype2"
[121] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype6"
[127] "subtype2" "subtype4" "subtype2" "subtype4" "subtype4" "subtype6"
[133] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype4"
[139] "subtype3" "subtype1" "subtype3" "subtype4" "subtype2" "subtype4"
[145] "subtype3" "subtype2" "subtype6" "subtype6" "subtype6" "subtype4"
[151] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype2"
[157] "subtype4" "subtype3" "subtype5" "subtype5" "subtype1" "subtype6"
[163] "subtype6" "subtype3" "subtype2" "subtype4" "subtype4" "subtype4"
[169] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype5"
[175] "subtype4" "subtype3" "subtype2" "subtype3" "subtype3" "subtype6"
[181] "subtype1" "subtype3" "subtype4" "subtype4" "subtype4" "subtype3"
[187] "subtype3" "subtype6" "subtype4" "subtype2" "subtype4" "subtype1"
[193] "subtype1" "subtype3" "subtype2" "subtype1" "subtype6" "subtype2"
[199] "subtype3" "subtype2" "subtype2" "subtype3" "subtype5" "subtype6"
[205] "subtype5" "subtype4" "subtype4" "subtype5" "subtype6" "subtype5"
[211] "subtype5" "subtype6" "subtype3" "subtype3" "subtype5" "subtype3"
[217] "subtype3" "subtype6" "subtype6" "subtype4" "subtype4" "subtype6"
[223] "subtype3" "subtype1" "subtype4" "subtype4" "subtype4" "subtype1"
[229] "subtype1" "subtype3" "subtype6" "subtype2" "subtype1" "subtype1"
[235] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype5"
[241] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype4"
[247] "subtype5" "subtype5" "subtype6" "subtype2" "subtype6" "subtype2"
[253] "subtype1" "subtype2" "subtype2" "subtype5" "subtype6" "subtype2"
[259] "subtype6" "subtype4" "subtype2" "subtype3" "subtype4" "subtype5"
[265] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype2"
[271] "subtype2" "subtype4" "subtype4" "subtype3" "subtype3" "subtype3"
[277] "subtype2" "subtype1" "subtype5" "subtype3" "subtype5" "subtype4"
[283] "subtype2" "subtype3" "subtype2" "subtype3" "subtype6" "subtype6"
[289] "subtype2" "subtype5" "subtype3" "subtype5" "subtype3" "subtype1"
[295] "subtype5" "subtype3" "subtype2" "subtype2" "subtype3" "subtype5"
[301] "subtype1" "subtype4" "subtype4" "subtype3" "subtype3" "subtype1"
[307] "subtype6" "subtype3" "subtype2" "subtype5" "subtype6" "subtype4"
[313] "subtype4" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[319] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype6"
[325] "subtype3" "subtype4" "subtype3" "subtype4" "subtype2" "subtype4"
[331] "subtype3" "subtype3" "subtype6" "subtype3" "subtype4" "subtype4"
[337] "subtype6" "subtype6" "subtype2" "subtype4" "subtype3" "subtype1"
[343] "subtype3" "subtype6" "subtype6" "subtype2" "subtype2" "subtype2"
[349] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[355] "subtype5" "subtype3" "subtype1" "subtype3" "subtype6" "subtype4"
[361] "subtype1" "subtype6" "subtype6" "subtype1" "subtype2" "subtype3"
[367] "subtype2" "subtype6" "subtype5" "subtype4" "subtype6" "subtype2"
[373] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype4"
[379] "subtype6" "subtype2" "subtype2" "subtype3" "subtype1" "subtype5"
[385] "subtype6" "subtype2" "subtype4" "subtype5" "subtype6" "subtype6"
[391] "subtype2" "subtype4" "subtype2" "subtype3" "subtype5" "subtype5"
[397] "subtype5" "subtype2" "subtype2" "subtype3" "subtype5" "subtype2"
[403] "subtype1" "subtype5" "subtype6" "subtype2" "subtype6" "subtype6"
[409] "subtype4" "subtype1" "subtype5" "subtype5" "subtype6" "subtype1"
[415] "subtype2" "subtype3" "subtype4" "subtype6" "subtype2" "subtype4"
[421] "subtype2" "subtype5" "subtype5" "subtype6" "subtype2" "subtype2"
[427] "subtype3" "subtype6" "subtype4" "subtype2" "subtype2" "subtype4"
[433] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[439] "subtype2" "subtype3" "subtype4" "subtype2" "subtype4" "subtype3"
[445] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[451] "subtype5" "subtype5" "subtype6" "subtype6" "subtype4" "subtype3"
[457] "subtype4" "subtype3" "subtype4" "subtype4" "subtype4" "subtype3"
[463] "subtype1" "subtype3" "subtype2" "subtype2" "subtype6" "subtype4"
[469] "subtype3" "subtype3" "subtype3" "subtype4" "subtype6" "subtype1"
[475] "subtype3" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[481] "subtype5" "subtype5" "subtype2" "subtype5" "subtype6" "subtype3"
[487] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype6"
[493] "subtype3" "subtype3" "subtype6" "subtype6" "subtype1" "subtype3"
[499] "subtype3" "subtype2" "subtype4" "subtype1" "subtype6" "subtype5"
[505] "subtype1" "subtype1" "subtype6" "subtype4" "subtype2" "subtype6"
[511] "subtype6" "subtype3" "subtype1" "subtype6" "subtype1" "subtype4"
[517] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype3"
[523] "subtype6" "subtype6" "subtype1" "subtype3" "subtype6" "subtype3"
[529] "subtype4" "subtype2" "subtype2" "subtype1" "subtype3" "subtype4"
[535] "subtype2" "subtype2" "subtype1" "subtype4" "subtype6" "subtype4"
[541] "subtype3" "subtype3" "subtype1" "subtype3" "subtype6" "subtype2"
[547] "subtype1" "subtype5" "subtype3" "subtype6" "subtype4" "subtype3"
[553] "subtype2" "subtype2" "subtype2"
  [1] "subtype3" "subtype5" "subtype5" "subtype4" "subtype5" "subtype5"
  [7] "subtype5" "subtype5" "subtype2" "subtype5" "subtype3" "subtype4"
 [13] "subtype6" "subtype3" "subtype4" "subtype3" "subtype3" "subtype6"
 [19] "subtype4" "subtype4" "subtype4" "subtype6" "subtype6" "subtype3"
 [25] "subtype5" "subtype1" "subtype3" "subtype3" "subtype5" "subtype3"
 [31] "subtype4" "subtype3" "subtype3" "subtype3" "subtype5" "subtype4"
 [37] "subtype6" "subtype6" "subtype6" "subtype2" "subtype1" "subtype6"
 [43] "subtype6" "subtype3" "subtype5" "subtype1" "subtype3" "subtype4"
 [49] "subtype4" "subtype4" "subtype6" "subtype3" "subtype3" "subtype4"
 [55] "subtype6" "subtype1" "subtype4" "subtype3" "subtype1" "subtype6"
 [61] "subtype6" "subtype6" "subtype4" "subtype5" "subtype6" "subtype1"
 [67] "subtype4" "subtype1" "subtype6" "subtype6" "subtype1" "subtype4"
 [73] "subtype3" "subtype6" "subtype4" "subtype6" "subtype1" "subtype2"
 [79] "subtype1" "subtype2" "subtype6" "subtype1" "subtype4" "subtype3"
 [85] "subtype2" "subtype3" "subtype2" "subtype6" "subtype1" "subtype1"
 [91] "subtype6" "subtype4" "subtype3" "subtype2" "subtype6" "subtype1"
 [97] "subtype4" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[103] "subtype6" "subtype3" "subtype4" "subtype5" "subtype6" "subtype3"
[109] "subtype6" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype3" "subtype4" "subtype6" "subtype2"
[121] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype6"
[127] "subtype2" "subtype4" "subtype2" "subtype4" "subtype4" "subtype6"
[133] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype4"
[139] "subtype3" "subtype1" "subtype3" "subtype4" "subtype2" "subtype4"
[145] "subtype3" "subtype2" "subtype6" "subtype6" "subtype6" "subtype4"
[151] "subtype2" "subtype2" "subtype1" "subtype2" "subtype4" "subtype2"
[157] "subtype4" "subtype3" "subtype5" "subtype5" "subtype1" "subtype6"
[163] "subtype6" "subtype3" "subtype2" "subtype4" "subtype4" "subtype4"
[169] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype5"
[175] "subtype4" "subtype3" "subtype2" "subtype3" "subtype3" "subtype6"
[181] "subtype1" "subtype3" "subtype4" "subtype4" "subtype4" "subtype3"
[187] "subtype3" "subtype6" "subtype4" "subtype2" "subtype4" "subtype1"
[193] "subtype1" "subtype3" "subtype2" "subtype1" "subtype6" "subtype2"
[199] "subtype3" "subtype2" "subtype2" "subtype3" "subtype5" "subtype6"
[205] "subtype5" "subtype4" "subtype4" "subtype5" "subtype6" "subtype5"
[211] "subtype5" "subtype6" "subtype3" "subtype3" "subtype5" "subtype3"
[217] "subtype3" "subtype6" "subtype6" "subtype4" "subtype4" "subtype6"
[223] "subtype3" "subtype1" "subtype4" "subtype4" "subtype4" "subtype1"
[229] "subtype1" "subtype3" "subtype6" "subtype2" "subtype1" "subtype1"
[235] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype5"
[241] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype4"
[247] "subtype5" "subtype5" "subtype6" "subtype2" "subtype6" "subtype2"
[253] "subtype1" "subtype2" "subtype2" "subtype5" "subtype6" "subtype2"
[259] "subtype6" "subtype4" "subtype2" "subtype3" "subtype4" "subtype5"
[265] "subtype4" "subtype2" "subtype1" "subtype4" "subtype4" "subtype2"
[271] "subtype2" "subtype4" "subtype4" "subtype3" "subtype3" "subtype3"
[277] "subtype2" "subtype1" "subtype5" "subtype3" "subtype5" "subtype4"
[283] "subtype2" "subtype3" "subtype2" "subtype3" "subtype6" "subtype6"
[289] "subtype2" "subtype5" "subtype3" "subtype5" "subtype3" "subtype1"
[295] "subtype5" "subtype3" "subtype2" "subtype2" "subtype3" "subtype5"
[301] "subtype1" "subtype4" "subtype4" "subtype3" "subtype3" "subtype1"
[307] "subtype6" "subtype3" "subtype2" "subtype5" "subtype6" "subtype4"
[313] "subtype4" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[319] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype6"
[325] "subtype3" "subtype4" "subtype3" "subtype4" "subtype2" "subtype4"
[331] "subtype3" "subtype3" "subtype6" "subtype3" "subtype4" "subtype4"
[337] "subtype6" "subtype6" "subtype2" "subtype4" "subtype3" "subtype1"
[343] "subtype3" "subtype6" "subtype6" "subtype2" "subtype2" "subtype2"
[349] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype3"
[355] "subtype5" "subtype3" "subtype1" "subtype3" "subtype6" "subtype4"
[361] "subtype1" "subtype6" "subtype6" "subtype1" "subtype2" "subtype3"
[367] "subtype2" "subtype6" "subtype5" "subtype4" "subtype6" "subtype2"
[373] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype4"
[379] "subtype6" "subtype2" "subtype2" "subtype3" "subtype1" "subtype5"
[385] "subtype6" "subtype2" "subtype4" "subtype5" "subtype6" "subtype6"
[391] "subtype2" "subtype4" "subtype2" "subtype3" "subtype5" "subtype5"
[397] "subtype5" "subtype2" "subtype2" "subtype3" "subtype5" "subtype2"
[403] "subtype1" "subtype5" "subtype6" "subtype2" "subtype6" "subtype6"
[409] "subtype4" "subtype1" "subtype5" "subtype5" "subtype6" "subtype1"
[415] "subtype2" "subtype3" "subtype4" "subtype6" "subtype2" "subtype4"
[421] "subtype2" "subtype5" "subtype5" "subtype6" "subtype2" "subtype2"
[427] "subtype3" "subtype6" "subtype4" "subtype2" "subtype2" "subtype4"
[433] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[439] "subtype2" "subtype3" "subtype4" "subtype2" "subtype4" "subtype3"
[445] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[451] "subtype5" "subtype5" "subtype6" "subtype6" "subtype4" "subtype3"
[457] "subtype4" "subtype3" "subtype4" "subtype4" "subtype4" "subtype3"
[463] "subtype1" "subtype3" "subtype2" "subtype2" "subtype6" "subtype4"
[469] "subtype3" "subtype3" "subtype3" "subtype4" "subtype6" "subtype1"
[475] "subtype3" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[481] "subtype5" "subtype5" "subtype2" "subtype5" "subtype6" "subtype3"
[487] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype6"
[493] "subtype3" "subtype3" "subtype6" "subtype6" "subtype1" "subtype3"
[499] "subtype3" "subtype2" "subtype4" "subtype1" "subtype6" "subtype5"
[505] "subtype1" "subtype1" "subtype6" "subtype4" "subtype2" "subtype6"
[511] "subtype6" "subtype3" "subtype1" "subtype6" "subtype1" "subtype4"
[517] "subtype1" "subtype1" "subtype4" "subtype4" "subtype4" "subtype3"
[523] "subtype6" "subtype6" "subtype1" "subtype3" "subtype6" "subtype3"
[529] "subtype4" "subtype2" "subtype2" "subtype1" "subtype3" "subtype4"
[535] "subtype2" "subtype2" "subtype1" "subtype4" "subtype6" "subtype4"
[541] "subtype3" "subtype3" "subtype1" "subtype3" "subtype6" "subtype2"
[547] "subtype1" "subtype5" "subtype3" "subtype6" "subtype4" "subtype3"
[553] "subtype2" "subtype2" "subtype2"
D4V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       0    66                0
  subtype2       1   118                1
  subtype3       0   121                1
  subtype4       1   101                0
  subtype5       0    56                0
  subtype6       0    94                0
D4V3, multiclass
D4V4, continuous
D4V5, binary
          cls
clus         0   1
  subtype1   0  66
  subtype2   0 120
  subtype3   0 122
  subtype4   1 101
  subtype5   1  55
  subtype6   1  93
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    0   66
  subtype2    0  120
  subtype3    0  122
  subtype4    1  101
  subtype5    1   55
  subtype6    1   93
          vv
clus       R0 R1 R2
  subtype1  1  2  0
  subtype2  1  8  1
  subtype3  4 10  0
  subtype4  4  5  0
  subtype5  0  0  0
  subtype6  4  2  0
D4V6, multiclass

Clustering(5) Variable = CN_CNMF
D5V1, survival
          sevent
clus2        0   1
  subtype1  71  97
  subtype2 105  91
  subtype3  85  98
subtype1 subtype2 subtype3 
     168      196      183 
subtype1 subtype2 subtype3 
      97       91       98 
$subtype1
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1337 TCGA-04-1350 TCGA-04-1351 
       40.24        41.00         1.81         2.01        63.98        65.46 
TCGA-04-1514 TCGA-04-1530 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-09-0364 
       56.55       119.08        55.40        48.89        28.64        29.16 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0369 TCGA-09-1659 TCGA-09-1664 TCGA-09-1666 
        9.47        57.73        35.54         9.96        74.89        57.57 
TCGA-09-1672 TCGA-09-2045 TCGA-09-2048 TCGA-09-2055 TCGA-09-2056 TCGA-10-0926 
        5.85        35.15         4.50        26.93        12.46        25.91 
TCGA-10-0930 TCGA-10-0934 TCGA-10-0935 TCGA-13-0714 TCGA-13-0720 TCGA-13-0762 
       33.24         3.88        35.41         6.21        44.55        32.25 
TCGA-13-0768 TCGA-13-0793 TCGA-13-0799 TCGA-13-0800 TCGA-13-0803 TCGA-13-0804 
        8.42        28.70         7.79         8.12        43.82        35.28 
TCGA-13-0805 TCGA-13-0886 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0899 
       35.28        74.27        61.81        67.99        69.01        56.15 
TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0919 TCGA-13-0921 TCGA-13-1405 
       37.08        27.68        34.06        14.89         4.64         7.36 
TCGA-13-1411 TCGA-13-1477 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 
        4.21        54.61        29.39        98.04        20.68        22.39 
TCGA-13-1494 TCGA-13-1499 TCGA-13-1500 TCGA-13-1507 TCGA-13-1510 TCGA-20-0987 
       38.17        38.37        13.97         4.77         2.56        23.05 
TCGA-20-0991 TCGA-20-0996 TCGA-23-1023 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 
       26.20        72.20        40.54        29.10        18.87         2.24 
TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-2072 TCGA-23-2078 
       31.20         4.57        33.30        86.01        24.95        87.48 
TCGA-24-0966 TCGA-24-0970 TCGA-24-0975 TCGA-24-0980 TCGA-24-1105 TCGA-24-1416 
        7.63        11.64        21.80         7.66        47.41         6.38 
TCGA-24-1422 TCGA-24-1430 TCGA-24-1463 TCGA-24-1467 TCGA-24-1471 TCGA-24-1545 
        0.76        28.34        72.92       105.99         1.18        57.37 
TCGA-24-1546 TCGA-24-1551 TCGA-24-1555 TCGA-24-1560 TCGA-24-1562 TCGA-24-1564 
       64.27        51.91        88.50        44.09        45.50        25.87 
TCGA-24-1565 TCGA-24-1603 TCGA-24-1844 TCGA-24-1849 TCGA-24-1923 TCGA-24-2024 
       10.26        90.15         3.72         5.75        22.65        58.16 
TCGA-24-2029 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2271 
       14.43        28.18        64.01        44.48        57.07        31.63 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2293 TCGA-24-2298 TCGA-25-1316 TCGA-25-1623 
       70.45        44.58        16.64        53.26        37.02        18.58 
TCGA-25-1625 TCGA-25-1626 TCGA-25-1628 TCGA-25-1630 TCGA-25-1633 TCGA-25-2042 
       18.02        15.78        20.58         7.86        60.59        13.02 
TCGA-25-2399 TCGA-25-2408 TCGA-29-1690 TCGA-29-1707 TCGA-29-1762 TCGA-29-1771 
       19.99        30.97        44.71        41.95        85.68        22.52 
TCGA-29-1785 TCGA-29-2427 TCGA-29-2436 TCGA-30-1853 TCGA-30-1855 TCGA-30-1880 
       34.62        62.47         9.76        36.26         2.47        57.57 
TCGA-30-1892 TCGA-31-1950 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1576 
       48.79        18.77        44.09        28.73        29.06        30.05 
TCGA-36-1577 TCGA-36-1580 TCGA-36-2532 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 
       25.74        24.23        29.49        25.91        25.08        23.80 
TCGA-36-2543 TCGA-42-2587 TCGA-42-2590 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 
        2.24        23.74         7.46        80.12        22.32       116.12 
TCGA-59-2354 TCGA-59-2355 TCGA-61-1721 TCGA-61-1727 TCGA-61-1734 TCGA-61-1736 
       34.39         2.14        11.11        18.54        28.47        48.79 
TCGA-61-1743 TCGA-61-1901 TCGA-61-1911 TCGA-61-1995 TCGA-61-1998 TCGA-61-2002 
       43.69        11.41        42.48         1.97         5.52        17.98 
TCGA-61-2009 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2092 TCGA-61-2094 
       39.85         1.18        45.96        45.40        51.72        71.74 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2110 TCGA-61-2612 TCGA-61-2613 
       61.64        58.39        60.62        44.52         6.35        31.07 

$subtype2
TCGA-04-1336 TCGA-04-1338 TCGA-04-1349 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 
       49.15        46.62        21.57        49.28        32.52        44.32 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1536 TCGA-04-1651 TCGA-04-1654 TCGA-09-0367 
       76.54        71.47        29.06        36.23        47.70        17.95 
TCGA-09-1662 TCGA-09-1665 TCGA-09-1668 TCGA-09-1669 TCGA-09-1673 TCGA-09-1675 
       89.33        41.59        55.36        30.48         3.02        97.55 
TCGA-09-2051 TCGA-10-0925 TCGA-10-0928 TCGA-10-0931 TCGA-10-0937 TCGA-13-0725 
       63.09        54.31        18.48        32.28        15.12        12.39 
TCGA-13-0726 TCGA-13-0755 TCGA-13-0758 TCGA-13-0761 TCGA-13-0766 TCGA-13-0792 
       31.07         2.47        11.38        34.06        21.40        36.72 
TCGA-13-0797 TCGA-13-0801 TCGA-13-0802 TCGA-13-0883 TCGA-13-0884 TCGA-13-0887 
        8.71         8.28         8.19        68.91       107.18        66.64 
TCGA-13-0893 TCGA-13-0897 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       43.36        57.47        57.07        19.36        47.38        48.33 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 
       47.84        44.94        44.84        29.98        21.14        13.81 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1412 TCGA-13-1481 TCGA-13-1482 
        6.08        10.88         6.61         5.33        87.06        61.71 
TCGA-13-1488 TCGA-13-1497 TCGA-13-1501 TCGA-13-1505 TCGA-13-1509 TCGA-13-1512 
       70.82        54.31        32.84         4.21         4.14         3.09 
TCGA-13-2059 TCGA-13-2065 TCGA-13-2071 TCGA-20-1682 TCGA-20-1685 TCGA-20-1686 
       12.23         8.75         6.28        27.48        16.67         2.93 
TCGA-20-1687 TCGA-23-1022 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
        2.66        42.51        26.83        31.73        49.41         8.81 
TCGA-23-1109 TCGA-23-1110 TCGA-23-1119 TCGA-23-1120 TCGA-23-1122 TCGA-23-1124 
       51.35        54.51       129.96         4.27        39.09        58.13 
TCGA-23-2077 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2645 
      115.89        91.66        77.00        49.84         2.76         4.50 
TCGA-24-0979 TCGA-24-1103 TCGA-24-1104 TCGA-24-1417 TCGA-24-1419 TCGA-24-1423 
       41.56        54.08        63.55         7.82         7.86         6.25 
TCGA-24-1425 TCGA-24-1427 TCGA-24-1428 TCGA-24-1435 TCGA-24-1436 TCGA-24-1464 
        5.95         4.80        17.36        43.53         8.55        12.46 
TCGA-24-1466 TCGA-24-1470 TCGA-24-1474 TCGA-24-1553 TCGA-24-1556 TCGA-24-1557 
       45.14         3.42        22.19        58.09        70.62        39.88 
TCGA-24-1563 TCGA-24-1567 TCGA-24-1604 TCGA-24-1842 TCGA-24-1846 TCGA-24-1847 
       47.70        17.23        88.34         8.32         4.37        11.28 
TCGA-24-1920 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-2026 TCGA-24-2030 
        9.80        30.21        16.41        11.05        34.82        53.95 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2289 TCGA-24-2290 TCGA-24-2297 TCGA-25-1313 
        0.36        47.54        67.36        36.23        55.86        26.93 
TCGA-25-1314 TCGA-25-1318 TCGA-25-1319 TCGA-25-1322 TCGA-25-1632 TCGA-25-1878 
       31.99        34.98        65.00         2.99        56.94        85.05 
TCGA-25-2391 TCGA-25-2392 TCGA-25-2397 TCGA-25-2401 TCGA-25-2409 TCGA-29-1688 
       49.05         1.02        12.00         2.96        26.96        78.87 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1701 TCGA-29-1702 
      101.75        38.53        33.70        31.17        16.90        18.64 
TCGA-29-1705 TCGA-29-1764 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1775 
       18.25        62.93        31.23        22.98        24.36        12.36 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 TCGA-29-1784 TCGA-29-2425 TCGA-29-2432 
       11.84        12.30         8.35         5.36        65.00        11.84 
TCGA-30-1718 TCGA-30-1857 TCGA-30-1860 TCGA-30-1861 TCGA-30-1891 TCGA-31-1944 
       51.91         0.26        44.91        34.78        30.05        45.57 
TCGA-31-1946 TCGA-31-1955 TCGA-31-1959 TCGA-36-1570 TCGA-36-1574 TCGA-36-1578 
       30.18        42.51         2.17        21.53        22.55        27.85 
TCGA-36-2530 TCGA-36-2534 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       33.01        29.79        21.60        20.98        18.31        20.52 
TCGA-36-2549 TCGA-42-2582 TCGA-42-2588 TCGA-42-2591 TCGA-57-1582 TCGA-57-1583 
        6.05        26.04         9.44        22.39        24.03        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1728 
       21.14         1.74         8.05        20.94        31.40        27.88 
TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1895 TCGA-61-1900 TCGA-61-1903 
       44.84        35.80         2.43         1.41         5.79        13.02 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1918 
       31.30        37.02        48.92        56.58        67.73        15.75 
TCGA-61-1919 TCGA-61-2008 TCGA-61-2104 TCGA-61-2109 
       38.17        30.61        76.83        20.68 

$subtype3
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1364 
       18.51        11.87        65.49        63.06        48.76        33.67 
TCGA-04-1371 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1542 TCGA-04-1646 
       82.36        41.59        19.99        38.37        84.20        27.88 
TCGA-04-1649 TCGA-04-1652 TCGA-04-1655 TCGA-09-1661 TCGA-09-1667 TCGA-09-1670 
       64.64        31.86        45.34        38.43        61.87        17.98 
TCGA-09-1674 TCGA-09-2043 TCGA-09-2044 TCGA-09-2049 TCGA-09-2050 TCGA-09-2053 
        8.55         6.15         6.12       112.37        71.11        39.75 
TCGA-09-2054 TCGA-10-0927 TCGA-10-0933 TCGA-10-0936 TCGA-10-0938 TCGA-13-0717 
       20.91        81.47        11.70        35.80        19.86        24.59 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0757 
       39.58         2.73        15.19        17.79        55.17        11.18 
TCGA-13-0760 TCGA-13-0764 TCGA-13-0791 TCGA-13-0794 TCGA-13-0795 TCGA-13-0807 
       11.54        31.04        38.93        30.35        19.56        13.61 
TCGA-13-0885 TCGA-13-0888 TCGA-13-0923 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 
       91.40        70.39         6.41         6.05         5.92         6.84 
TCGA-13-1410 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1495 TCGA-13-1496 
        4.70        82.88        52.44        73.55        49.22         4.24 
TCGA-13-1498 TCGA-13-1504 TCGA-13-1506 TCGA-13-1511 TCGA-13-2057 TCGA-13-2060 
       37.61        16.57         4.41         3.88        14.24         8.58 
TCGA-13-2061 TCGA-20-0990 TCGA-20-1683 TCGA-20-1684 TCGA-23-1021 TCGA-23-1024 
       10.78        25.94        25.38        19.07        47.54        15.39 
TCGA-23-1111 TCGA-23-1114 TCGA-23-1121 TCGA-23-1123 TCGA-23-1809 TCGA-23-2643 
        3.22        68.68         6.38        33.47         0.53         4.70 
TCGA-24-0968 TCGA-24-0982 TCGA-24-1413 TCGA-24-1418 TCGA-24-1424 TCGA-24-1426 
       19.63        22.32         6.31         7.99         6.02         5.36 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1469 TCGA-24-1544 TCGA-24-1548 TCGA-24-1549 
       19.17        18.67         9.11        26.96        16.21        56.58 
TCGA-24-1550 TCGA-24-1552 TCGA-24-1558 TCGA-24-1614 TCGA-24-1616 TCGA-24-1843 
       41.06        41.39        19.53        48.33        38.24         3.48 
TCGA-24-1845 TCGA-24-1850 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 
        3.81         5.49        81.11         4.87       151.99        44.84 
TCGA-24-2027 TCGA-24-2033 TCGA-24-2260 TCGA-24-2261 TCGA-24-2288 TCGA-24-2295 
      109.68        18.48        36.16         0.79         0.82        33.11 
TCGA-25-1312 TCGA-25-1315 TCGA-25-1317 TCGA-25-1320 TCGA-25-1321 TCGA-25-1323 
        1.02        51.06         1.02        36.95        33.96        12.00 
TCGA-25-1329 TCGA-25-1627 TCGA-25-1631 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 
        2.96         0.36         0.30        35.54        51.22        14.93 
TCGA-25-1871 TCGA-25-1877 TCGA-25-2393 TCGA-25-2396 TCGA-25-2398 TCGA-25-2400 
       24.99        18.05        38.04         3.02        45.01        42.02 
TCGA-25-2404 TCGA-29-1691 TCGA-29-1695 TCGA-29-1698 TCGA-29-1699 TCGA-29-1703 
       29.00        47.18         0.79        68.28         0.53        59.67 
TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1763 TCGA-29-1766 TCGA-29-1774 
       29.23        34.62        17.00        66.77        39.09        17.29 
TCGA-29-1778 TCGA-29-1783 TCGA-29-2414 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 
       14.93         7.20        86.17        45.11         4.87        42.25 
TCGA-29-2434 TCGA-30-1714 TCGA-30-1856 TCGA-30-1859 TCGA-30-1862 TCGA-30-1866 
       11.47        38.07        15.68        48.07         6.08        36.62 
TCGA-30-1867 TCGA-30-1887 TCGA-31-1951 TCGA-31-1953 TCGA-36-1571 TCGA-36-1575 
        1.18        24.26        22.45         6.71        22.85         8.55 
TCGA-36-1581 TCGA-36-2529 TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-42-2589 
       24.69        35.05        14.17        16.14        11.47         7.56 
TCGA-42-2593 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 
        1.48        22.32        28.96        25.05        25.02       180.16 
TCGA-59-2352 TCGA-59-2363 TCGA-59-2372 TCGA-61-1730 TCGA-61-1733 TCGA-61-1741 
        9.40         5.39        44.78         4.34        31.76        33.67 
TCGA-61-1899 TCGA-61-1904 TCGA-61-1906 TCGA-61-1917 TCGA-61-2000 TCGA-61-2003 
        8.42         9.07        34.13        43.43        14.50         3.98 
TCGA-61-2012 TCGA-61-2087 TCGA-61-2088 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
       30.64         4.80         4.77        65.49        55.50         6.48 
TCGA-61-2111 TCGA-61-2113 TCGA-61-2614 
      125.72        22.22         8.58 

subtype1 subtype2 subtype3 
    0.76     0.26     0.30 
subtype1 subtype2 subtype3 
  119.08   129.96   180.16 
subtype1 subtype2 subtype3 
  29.770   30.015   22.320 
[1] "0.8 - 119.1 (29.8)" "0.3 - 130.0 (30.0)" "0.3 - 180.2 (22.3)"
  [1] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
  [7] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [13] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
 [19] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
 [31] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [37] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
 [67] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [73] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
 [79] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
 [85] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [91] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
 [97] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[103] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[109] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[115] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[121] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[133] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[139] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[151] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[157] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[163] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[175] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[181] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[187] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[193] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[211] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[217] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[223] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[229] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[235] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[241] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[247] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[265] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[271] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[283] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[295] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[307] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[313] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[319] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[331] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[337] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[343] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[349] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[355] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[361] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[367] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[373] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[385] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[391] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[397] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[403] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[409] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[415] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[421] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[427] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[433] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[445] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[451] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[457] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[463] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[469] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[475] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[481] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[487] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[493] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[499] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[505] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[511] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[517] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[523] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[529] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[535] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[541] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[547] "subtype3"
  [1] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
  [7] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [13] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
 [19] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
 [31] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [37] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
 [67] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [73] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
 [79] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
 [85] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [91] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
 [97] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[103] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[109] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[115] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[121] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[133] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[139] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[151] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[157] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[163] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[175] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[181] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[187] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[193] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[211] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[217] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[223] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[229] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[235] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[241] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[247] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[265] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[271] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[283] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[295] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[307] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[313] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[319] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[331] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[337] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[343] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[349] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[355] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[361] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[367] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[373] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[385] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[391] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[397] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[403] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[409] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[415] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[421] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[427] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[433] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[445] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[451] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[457] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[463] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[469] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[475] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[481] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[487] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[493] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[499] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[505] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[511] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[517] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[523] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[529] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[535] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[541] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[547] "subtype3"
  [1] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
  [7] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [13] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
 [19] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
 [25] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
 [31] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [37] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [43] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
 [67] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [73] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
 [79] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
 [85] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [91] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
 [97] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[103] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[109] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[115] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[121] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[133] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[139] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[151] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[157] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[163] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[175] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[181] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[187] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[193] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype2" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[211] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[217] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
[223] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[229] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[235] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[241] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[247] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[253] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[259] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[265] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[271] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[277] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[283] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[289] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[295] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[307] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
[313] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[319] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[331] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[337] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[343] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[349] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[355] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[361] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[367] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[373] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[379] "subtype2" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[385] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[391] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[397] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[403] "subtype1" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
[409] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype2"
[415] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[421] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[427] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype3"
[433] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[439] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[445] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[451] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[457] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[463] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
[469] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[475] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[481] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[487] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[493] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[499] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[505] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[511] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype3"
[517] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[523] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[529] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[535] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
[541] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[547] "subtype3"
D5V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       1   169                0
  subtype2       1   197                0
  subtype3       0   182                2
D5V3, multiclass
D5V4, continuous
D5V5, binary
          cls
clus         0   1
  subtype1   1 172
  subtype2   0 201
  subtype3   2 186
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    1  172
  subtype2    0  201
  subtype3    2  186
     clus
vv    subtype1 subtype2 subtype3
  NO         1        0        2
  YES      172      201      186
          vv
clus       R0 R1 R2
  subtype1  2 11  0
  subtype2  4  6  1
  subtype3  8  9  1
D5V6, multiclass

Clustering(6) Variable = METHLYATION_CNMF
D6V1, survival
          sevent
clus2        0   1
  subtype1  69 101
  subtype2  86  86
  subtype3 109 107
subtype1 subtype2 subtype3 
     170      172      216 
subtype1 subtype2 subtype3 
     101       86      107 
$subtype1
TCGA-04-1331 TCGA-04-1342 TCGA-04-1343 TCGA-04-1347 TCGA-04-1350 TCGA-04-1364 
       40.24        18.51        11.87        63.06        63.98        33.67 
TCGA-04-1369 TCGA-04-1371 TCGA-04-1514 TCGA-04-1530 TCGA-04-1542 TCGA-04-1638 
       21.11        82.36        56.55       119.08        84.20        55.40 
TCGA-04-1644 TCGA-04-1646 TCGA-04-1652 TCGA-09-0364 TCGA-09-0365 TCGA-09-0369 
       48.89        27.88        31.86        29.16         9.47        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1665 TCGA-09-1669 TCGA-09-1673 TCGA-09-1674 
        9.96        38.43        41.59        30.48         3.02         8.55 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2054 TCGA-09-2055 TCGA-10-0926 
        4.50       112.37        71.11        20.91        26.93        25.91 
TCGA-10-0927 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0938 
       81.47        11.70         3.88        35.41        35.80        19.86 
TCGA-13-0717 TCGA-13-0724 TCGA-13-0730 TCGA-13-0757 TCGA-13-0762 TCGA-13-0764 
       24.59         2.73        17.79        11.18        32.25        31.04 
TCGA-13-0794 TCGA-13-0800 TCGA-13-0802 TCGA-13-0888 TCGA-13-0891 TCGA-13-0899 
       30.35         8.12         8.19        70.39        69.01        56.15 
TCGA-13-0904 TCGA-13-0906 TCGA-13-0913 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 
       48.33        44.94        29.98        13.81         4.64         6.41 
TCGA-13-1407 TCGA-13-1410 TCGA-13-1481 TCGA-13-1487 TCGA-13-1491 TCGA-13-1492 
        6.05         4.70        87.06        22.39        52.44        73.55 
TCGA-13-1496 TCGA-13-1505 TCGA-13-1507 TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 
        4.24         4.21         4.77        14.24         8.58        10.78 
TCGA-13-2066 TCGA-20-0990 TCGA-20-1684 TCGA-20-1686 TCGA-23-1022 TCGA-23-1024 
        9.70        25.94        19.07         2.93        42.51        15.39 
TCGA-23-1030 TCGA-23-1032 TCGA-23-1107 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
       29.10         2.24         0.30        51.35        54.51         3.22 
TCGA-23-1114 TCGA-23-1120 TCGA-23-1121 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 
       68.68         4.27         6.38        33.47        58.13         0.53 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1424 TCGA-24-1431 TCGA-24-1434 TCGA-24-1469 
        7.99         7.86         6.02        19.17        18.67         9.11 
TCGA-24-1544 TCGA-24-1552 TCGA-24-1558 TCGA-24-1567 TCGA-24-1843 TCGA-24-1844 
       26.96        41.39        19.53        17.23         3.48         3.72 
TCGA-24-1850 TCGA-24-1920 TCGA-24-2020 TCGA-24-2026 TCGA-24-2027 TCGA-24-2030 
        5.49         9.80       151.99        34.82       109.68        53.95 
TCGA-24-2033 TCGA-24-2260 TCGA-24-2280 TCGA-24-2295 TCGA-24-2297 TCGA-25-1312 
       18.48        36.16        70.45        33.11        55.86         1.02 
TCGA-25-1315 TCGA-25-1316 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1323 
       51.06        37.02        65.00        36.95        33.96        12.00 
TCGA-25-1324 TCGA-25-1627 TCGA-25-1634 TCGA-25-1870 TCGA-25-1877 TCGA-25-2393 
       34.03         0.36        35.54        14.93        18.05        38.04 
TCGA-25-2396 TCGA-25-2399 TCGA-25-2400 TCGA-29-1691 TCGA-29-1695 TCGA-29-1697 
        3.02        19.99        42.02        47.18         0.79        31.17 
TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1761 
       68.28         0.53        16.90        18.64        59.67        17.00 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1766 TCGA-29-1774 TCGA-29-1775 TCGA-29-1778 
       85.68        66.77        39.09        17.29        12.36        14.93 
TCGA-29-1783 TCGA-29-2414 TCGA-29-2425 TCGA-29-2428 TCGA-29-2429 TCGA-29-2434 
        7.20        86.17        65.00        45.11         4.87        11.47 
TCGA-30-1714 TCGA-30-1853 TCGA-30-1859 TCGA-30-1867 TCGA-36-1571 TCGA-36-1575 
       38.07        36.26        48.07         1.18        22.85         8.55 
TCGA-36-2551 TCGA-36-2552 TCGA-42-2593 TCGA-57-1992 TCGA-57-1993 TCGA-59-2352 
       16.14        11.47         1.48        28.96        25.05         9.40 
TCGA-59-2372 TCGA-61-1728 TCGA-61-1730 TCGA-61-1738 TCGA-61-1741 TCGA-61-1743 
       44.78        27.88         4.34        35.80        33.67        43.69 
TCGA-61-1910 TCGA-61-1917 TCGA-61-1919 TCGA-61-2088 TCGA-61-2092 TCGA-61-2101 
       37.02        43.43        38.17         4.77        51.72        55.50 
TCGA-61-2102 TCGA-61-2111 
        6.48       125.72 

$subtype2
TCGA-04-1332 TCGA-04-1337 TCGA-04-1338 TCGA-04-1346 TCGA-04-1351 TCGA-04-1356 
       41.00         2.01        46.62        65.49        65.46        49.28 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1365 TCGA-04-1655 TCGA-09-1662 TCGA-09-1666 
       32.52        44.32        76.54        45.34        89.33        57.57 
TCGA-09-2045 TCGA-09-2053 TCGA-10-0928 TCGA-13-0725 TCGA-13-0727 TCGA-13-0758 
       35.15        39.75        18.48        12.39        15.19        11.38 
TCGA-13-0765 TCGA-13-0766 TCGA-13-0792 TCGA-13-0799 TCGA-13-0883 TCGA-13-0884 
       28.57        21.40        36.72         7.79        68.91       107.18 
TCGA-13-0890 TCGA-13-0893 TCGA-13-0894 TCGA-13-0901 TCGA-13-0908 TCGA-13-0910 
       67.99        43.36        49.61        19.36        44.84        37.08 
TCGA-13-0911 TCGA-13-0912 TCGA-13-1409 TCGA-13-1411 TCGA-13-1477 TCGA-13-1484 
       27.68        34.06         6.84         4.21        54.61        98.04 
TCGA-13-1485 TCGA-13-1489 TCGA-13-1494 TCGA-13-1498 TCGA-13-1499 TCGA-13-1501 
       20.68        82.88        38.17        37.61        38.37        32.84 
TCGA-13-1509 TCGA-13-1512 TCGA-13-2071 TCGA-20-0991 TCGA-20-0996 TCGA-23-1023 
        4.14         3.09         6.28        26.20        72.20        40.54 
TCGA-23-1031 TCGA-23-1113 TCGA-23-1117 TCGA-23-1118 TCGA-23-1122 TCGA-23-2077 
       18.87        31.20        33.30        86.01        39.09       115.89 
TCGA-23-2078 TCGA-23-2079 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-23-2647 
       87.48        91.66         2.76         4.70         4.50         4.44 
TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0982 TCGA-24-1104 TCGA-24-1105 
       11.64        21.80        41.56        22.32        63.55        47.41 
TCGA-24-1416 TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 
        6.38         0.76         6.25         5.95         5.36         4.80 
TCGA-24-1430 TCGA-24-1463 TCGA-24-1471 TCGA-24-1474 TCGA-24-1545 TCGA-24-1546 
       28.34        72.92         1.18        22.19        57.37        64.27 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1553 TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 
       41.06        51.91        58.09        39.88        44.09        45.50 
TCGA-24-1564 TCGA-24-1603 TCGA-24-1847 TCGA-24-1849 TCGA-24-1923 TCGA-24-1927 
       25.87        90.15        11.28         5.75        22.65        16.41 
TCGA-24-2029 TCGA-24-2036 TCGA-24-2038 TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 
       14.43        64.01        44.48        53.26        26.93        31.99 
TCGA-25-1317 TCGA-25-1328 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1628 
        1.02        65.06        18.58        18.02        15.78        20.58 
TCGA-25-1630 TCGA-25-1632 TCGA-25-1633 TCGA-25-1871 TCGA-25-2042 TCGA-25-2391 
        7.86        56.94        60.59        24.99        13.02        49.05 
TCGA-25-2392 TCGA-25-2398 TCGA-25-2408 TCGA-25-2409 TCGA-29-1694 TCGA-29-1705 
        1.02        45.01        30.97        26.96        38.53        18.25 
TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1781 TCGA-29-2427 TCGA-29-2431 
       31.23        22.98        24.36         8.35        62.47        42.25 
TCGA-29-2432 TCGA-29-2436 TCGA-30-1855 TCGA-30-1861 TCGA-30-1866 TCGA-30-1880 
       11.84         9.76         2.47        34.78        36.62        57.57 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1951 TCGA-31-1955 TCGA-31-1956 
       30.05        48.79        45.57        22.45        42.51        44.09 
TCGA-31-1959 TCGA-36-1569 TCGA-36-1576 TCGA-36-1577 TCGA-36-1580 TCGA-36-2537 
        2.17        29.06        30.05        25.74        24.23        25.91 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2544 TCGA-36-2548 TCGA-42-2589 TCGA-42-2590 
       25.08        23.80        20.98        14.17         7.56         7.46 
TCGA-42-2591 TCGA-57-1586 TCGA-57-1994 TCGA-59-2348 TCGA-59-2350 TCGA-59-2354 
       22.39        22.32        25.02       180.16        22.32        34.39 
TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 TCGA-61-1722 TCGA-61-1725 TCGA-61-1733 
        2.14         5.39        11.11         8.05        31.40        31.76 
TCGA-61-1734 TCGA-61-1895 TCGA-61-1900 TCGA-61-1995 TCGA-61-1998 TCGA-61-2003 
       28.47         1.41         5.79         1.97         5.52         3.98 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2095 TCGA-61-2096 TCGA-61-2098 TCGA-61-2109 
       30.61        39.85        61.64        58.39        65.49        20.68 
TCGA-61-2110 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       44.52         6.35        31.07         8.58 

$subtype3
TCGA-04-1335 TCGA-04-1336 TCGA-04-1348 TCGA-04-1349 TCGA-04-1367 TCGA-04-1516 
        1.81        49.15        48.76        21.57        71.47        41.59 
TCGA-04-1517 TCGA-04-1525 TCGA-04-1536 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 
       19.99        38.37        29.06        28.64        64.64        36.23 
TCGA-04-1654 TCGA-09-0366 TCGA-09-0367 TCGA-09-1664 TCGA-09-1667 TCGA-09-1668 
       47.70        57.73        17.95        74.89        61.87        55.36 
TCGA-09-1670 TCGA-09-1672 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2051 
       17.98         5.85        97.55         6.15         6.12        63.09 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0930 TCGA-10-0931 TCGA-10-0937 TCGA-13-0714 
       12.46        54.31        33.24        32.28        15.12         6.21 
TCGA-13-0720 TCGA-13-0723 TCGA-13-0726 TCGA-13-0751 TCGA-13-0755 TCGA-13-0760 
       44.55        39.58        31.07        55.17         2.47        11.54 
TCGA-13-0761 TCGA-13-0768 TCGA-13-0791 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 
       34.06         8.42        38.93        28.70        19.56         8.71 
TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0885 
        8.28        43.82        35.28        35.28        13.61        91.40 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0897 TCGA-13-0900 TCGA-13-0903 
       74.27        66.64        61.81        57.47        57.07        47.38 
TCGA-13-0905 TCGA-13-0916 TCGA-13-0919 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 
       47.84        21.14        14.89         6.08        10.88         6.61 
TCGA-13-1405 TCGA-13-1408 TCGA-13-1412 TCGA-13-1482 TCGA-13-1483 TCGA-13-1488 
        7.36         5.92         5.33        61.71        29.39        70.82 
TCGA-13-1495 TCGA-13-1497 TCGA-13-1500 TCGA-13-1504 TCGA-13-1506 TCGA-13-1510 
       49.22        54.31        13.97        16.57         4.41         2.56 
TCGA-13-1511 TCGA-13-2059 TCGA-13-2065 TCGA-20-0987 TCGA-20-1682 TCGA-20-1683 
        3.88        12.23         8.75        23.05        27.48        25.38 
TCGA-20-1685 TCGA-20-1687 TCGA-23-1021 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 
       16.67         2.66        47.54        26.83        31.73        49.41 
TCGA-23-1029 TCGA-23-1116 TCGA-23-1119 TCGA-23-2072 TCGA-23-2081 TCGA-23-2084 
        8.81         4.57       129.96        24.95        77.00        49.84 
TCGA-23-2649 TCGA-24-0966 TCGA-24-0968 TCGA-24-0980 TCGA-24-1103 TCGA-24-1413 
        3.81         7.63        19.63         7.66        54.08         6.31 
TCGA-24-1417 TCGA-24-1428 TCGA-24-1435 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 
        7.82        17.36        43.53         8.55        12.46        45.14 
TCGA-24-1467 TCGA-24-1470 TCGA-24-1548 TCGA-24-1549 TCGA-24-1555 TCGA-24-1556 
      105.99         3.42        16.21        56.58        88.50        70.62 
TCGA-24-1563 TCGA-24-1565 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 
       47.70        10.26        88.34        48.33        38.24         8.32 
TCGA-24-1845 TCGA-24-1846 TCGA-24-1924 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 
        3.81         4.37        30.21        11.05        81.11         4.87 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2035 TCGA-24-2254 TCGA-24-2261 TCGA-24-2262 
       44.84        58.16        28.18        57.07         0.79         0.36 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 
       47.54        31.63        44.58         0.82        67.36        36.23 
TCGA-24-2293 TCGA-25-1318 TCGA-25-1322 TCGA-25-1325 TCGA-25-1326 TCGA-25-1329 
       16.64        34.98         2.99        32.09        31.04         2.96 
TCGA-25-1631 TCGA-25-1635 TCGA-25-1878 TCGA-25-2397 TCGA-25-2401 TCGA-25-2404 
        0.30        51.22        85.05        12.00         2.96        29.00 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 TCGA-29-1696 TCGA-29-1707 TCGA-29-1710 
       78.87        44.71       101.75        33.70        41.95        29.23 
TCGA-29-1711 TCGA-29-1764 TCGA-29-1771 TCGA-29-1776 TCGA-29-1777 TCGA-29-1784 
       34.62        62.93        22.52        11.84        12.30         5.36 
TCGA-29-1785 TCGA-30-1718 TCGA-30-1856 TCGA-30-1857 TCGA-30-1860 TCGA-30-1862 
       34.62        51.91        15.68         0.26        44.91         6.08 
TCGA-30-1869 TCGA-30-1887 TCGA-31-1946 TCGA-31-1950 TCGA-31-1953 TCGA-36-1568 
       51.39        24.26        30.18        18.77         6.71        28.73 
TCGA-36-1570 TCGA-36-1574 TCGA-36-1578 TCGA-36-1581 TCGA-36-2529 TCGA-36-2532 
       21.53        22.55        27.85        24.69        35.05        29.49 
TCGA-36-2534 TCGA-36-2542 TCGA-36-2543 TCGA-36-2545 TCGA-36-2547 TCGA-36-2549 
       29.79        21.60         2.24        18.31        20.52         6.05 
TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 
       26.04        23.74         9.44        24.03        11.38        21.14 
TCGA-57-1585 TCGA-59-2349 TCGA-59-2351 TCGA-61-1724 TCGA-61-1727 TCGA-61-1736 
        1.74        80.12       116.12        20.94        18.54        48.79 
TCGA-61-1737 TCGA-61-1740 TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 
       44.84         2.43         8.42        11.41        13.02         9.07 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 
       34.13        31.30        42.48        48.92        56.58        67.73 
TCGA-61-1918 TCGA-61-2000 TCGA-61-2002 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 
       15.75        14.50        17.98        30.64         1.18        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2094 TCGA-61-2097 TCGA-61-2104 TCGA-61-2113 
       45.40         4.80        71.74        60.62        76.83        22.22 

subtype1 subtype2 subtype3 
    0.30     0.76     0.26 
subtype1 subtype2 subtype3 
  151.99   180.16   129.96 
subtype1 subtype2 subtype3 
  26.945   28.815   28.410 
[1] "0.3 - 152.0 (26.9)" "0.8 - 180.2 (28.8)" "0.3 - 130.0 (28.4)"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
  [7] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
 [13] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
 [19] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
 [25] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
 [37] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
 [43] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
 [49] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
 [55] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [61] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [67] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [79] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
 [85] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
 [91] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [97] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[103] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[109] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[121] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[133] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[139] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[151] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[157] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[163] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[175] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[181] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[187] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[199] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[205] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[217] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[223] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[235] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[241] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[253] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[259] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[271] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[277] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[283] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[289] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[295] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[301] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[307] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[313] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[319] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[337] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[343] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[349] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[373] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[379] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[385] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[391] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[397] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[403] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[409] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[415] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[421] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[427] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[433] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[439] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[445] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[451] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[457] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[463] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[469] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[475] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[481] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[487] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[493] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[499] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[505] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[511] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[517] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[523] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[529] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[535] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[541] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[547] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[553] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
  [7] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
 [13] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
 [19] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
 [25] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
 [37] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
 [43] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
 [49] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
 [55] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [61] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [67] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [79] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
 [85] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
 [91] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [97] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[103] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[109] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[121] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[133] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[139] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[151] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[157] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[163] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[175] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[181] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[187] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[199] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[205] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[217] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[223] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[235] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[241] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[253] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[259] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[271] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[277] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[283] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[289] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[295] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[301] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[307] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[313] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[319] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[337] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[343] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[349] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[373] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[379] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[385] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[391] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[397] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[403] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[409] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[415] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[421] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[427] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[433] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[439] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[445] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[451] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[457] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[463] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[469] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[475] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[481] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[487] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[493] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[499] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[505] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[511] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[517] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[523] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[529] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[535] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[541] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[547] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[553] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
  [7] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
 [13] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
 [19] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
 [25] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
 [37] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
 [43] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
 [49] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
 [55] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [61] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [67] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
 [73] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
 [79] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
 [85] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
 [91] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
 [97] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[103] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[109] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[121] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
[127] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[133] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[139] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[151] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
[157] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[163] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
[169] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[175] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[181] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[187] "subtype2" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[199] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[205] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[211] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[217] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype1"
[223] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[235] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[241] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[247] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[253] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[259] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[271] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[277] "subtype2" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[283] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[289] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[295] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[301] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[307] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[313] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[319] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[325] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[337] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[343] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[349] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[367] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[373] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype2"
[379] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[385] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[391] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype3"
[397] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[403] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[409] "subtype3" "subtype1" "subtype2" "subtype1" "subtype3" "subtype3"
[415] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[421] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[427] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[433] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[439] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[445] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[451] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[457] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[463] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[469] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[475] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[481] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[487] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[493] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[499] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[505] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[511] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[517] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[523] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[529] "subtype1" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[535] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[541] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[547] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[553] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
D6V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       0   170                1
  subtype2       0   175                0
  subtype3       2   215                1
D6V3, multiclass
D6V4, continuous
D6V5, binary
          cls
clus         0   1
  subtype1   1 174
  subtype2   1 179
  subtype3   1 218
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    1  174
  subtype2    1  179
  subtype3    1  218
     clus
vv    subtype1 subtype2 subtype3
  NO         1        1        1
  YES      174      179      218
          vv
clus       R0 R1 R2
  subtype1  4  8  1
  subtype2  4 12  0
  subtype3  6  6  1
D6V6, multiclass

Clustering(7) Variable = RPPA_CNMF
D7V1, survival
          sevent
clus2        0   1
  subtype1  54  66
  subtype2 105  92
  subtype3  30  54
subtype1 subtype2 subtype3 
     120      197       84 
subtype1 subtype2 subtype3 
      66       92       54 
$subtype1
TCGA-04-1335 TCGA-04-1338 TCGA-04-1342 TCGA-04-1525 TCGA-04-1542 TCGA-04-1638 
        1.81        46.62        18.51        38.37        84.20        55.40 
TCGA-09-1664 TCGA-09-1665 TCGA-09-2049 TCGA-09-2056 TCGA-10-0925 TCGA-10-0933 
       74.89        41.59       112.37        12.46        54.31        11.70 
TCGA-13-0725 TCGA-13-0793 TCGA-13-0894 TCGA-13-0901 TCGA-13-0903 TCGA-13-0906 
       12.39        28.70        49.61        19.36        47.38        44.94 
TCGA-13-0910 TCGA-13-0913 TCGA-13-1408 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
       37.08        29.98         5.92         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1488 TCGA-13-1489 
       87.06        61.71        29.39        98.04        70.82        82.88 
TCGA-13-1491 TCGA-13-1494 TCGA-13-1495 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 
       52.44        38.17        49.22        37.61        38.37        13.97 
TCGA-13-1501 TCGA-13-2065 TCGA-20-1683 TCGA-20-1686 TCGA-23-1122 TCGA-23-2078 
       32.84         8.75        25.38         2.93        39.09        87.48 
TCGA-24-0970 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1104 TCGA-24-1105 
       11.64        41.56         7.66        22.32        63.55        47.41 
TCGA-24-1427 TCGA-24-1545 TCGA-24-1546 TCGA-24-1553 TCGA-24-1563 TCGA-24-1842 
        4.80        57.37        64.27        58.09        47.70         8.32 
TCGA-24-1850 TCGA-24-1923 TCGA-24-1924 TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 
        5.49        22.65        30.21       109.68        14.43        18.48 
TCGA-24-2038 TCGA-24-2260 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2281 
       44.48        36.16         0.36        47.54        31.63        44.58 
TCGA-24-2293 TCGA-24-2297 TCGA-24-2298 TCGA-25-1319 TCGA-25-1322 TCGA-25-1323 
       16.64        55.86        53.26        65.00         2.99        12.00 
TCGA-25-1326 TCGA-25-1623 TCGA-25-1630 TCGA-25-2042 TCGA-25-2398 TCGA-25-2404 
       31.04        18.58         7.86        13.02        45.01        29.00 
TCGA-25-2408 TCGA-29-1690 TCGA-29-1768 TCGA-29-1771 TCGA-29-1776 TCGA-29-2425 
       30.97        44.71        31.23        22.52        11.84        65.00 
TCGA-29-2427 TCGA-29-2429 TCGA-30-1856 TCGA-30-1892 TCGA-31-1944 TCGA-31-1950 
       62.47         4.87        15.68        48.79        45.57        18.77 
TCGA-36-1568 TCGA-36-1569 TCGA-36-1575 TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 
       28.73        29.06         8.55        25.74        24.23        24.69 
TCGA-36-2537 TCGA-36-2540 TCGA-36-2543 TCGA-36-2549 TCGA-42-2587 TCGA-42-2591 
       25.91        23.80         2.24         6.05        23.74        22.39 
TCGA-59-2351 TCGA-59-2363 TCGA-61-1722 TCGA-61-1900 TCGA-61-1903 TCGA-61-1906 
      116.12         5.39         8.05         5.79        13.02        34.13 
TCGA-61-1907 TCGA-61-1919 TCGA-61-2003 TCGA-61-2012 TCGA-61-2094 TCGA-61-2095 
       31.30        38.17         3.98        30.64        71.74        61.64 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2111 TCGA-61-2113 TCGA-61-2610 TCGA-61-2613 
       65.49        55.50       125.72        22.22        51.91        31.07 

$subtype2
TCGA-04-1336 TCGA-04-1348 TCGA-04-1349 TCGA-04-1356 TCGA-04-1361 TCGA-04-1369 
       49.15        48.76        21.57        49.28        32.52        21.11 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1646 TCGA-04-1649 TCGA-04-1651 
       56.55        41.59        19.99        27.88        64.64        36.23 
TCGA-09-1666 TCGA-09-1670 TCGA-09-1673 TCGA-09-2043 TCGA-09-2044 TCGA-09-2051 
       57.57        17.98         3.02         6.15         6.12        63.09 
TCGA-09-2054 TCGA-09-2055 TCGA-10-0931 TCGA-10-0936 TCGA-13-0720 TCGA-13-0794 
       20.91        26.93        32.28        35.80        44.55        30.35 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0804 
        8.71         7.79         8.12         8.28         8.19        35.28 
TCGA-13-0884 TCGA-13-0887 TCGA-13-0888 TCGA-13-0891 TCGA-13-0899 TCGA-13-0916 
      107.18        66.64        70.39        69.01        56.15        21.14 
TCGA-13-0920 TCGA-13-0921 TCGA-13-1404 TCGA-13-1409 TCGA-13-1410 TCGA-13-1487 
       13.81         4.64         6.61         6.84         4.70        22.39 
TCGA-13-1492 TCGA-13-1496 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1511 
       73.55         4.24        16.57         4.21         4.41         3.88 
TCGA-13-1512 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2066 TCGA-20-1684 
        3.09        12.23         8.58        10.78         9.70        19.07 
TCGA-20-1685 TCGA-20-1687 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1121 
       16.67         2.66        51.35        54.51         3.22         6.38 
TCGA-23-1123 TCGA-23-1809 TCGA-23-2077 TCGA-23-2079 TCGA-23-2641 TCGA-23-2643 
       33.47         0.53       115.89        91.66         2.76         4.70 
TCGA-23-2645 TCGA-23-2649 TCGA-24-0966 TCGA-24-1103 TCGA-24-1416 TCGA-24-1417 
        4.50         3.81         7.63        54.08         6.38         7.82 
TCGA-24-1419 TCGA-24-1424 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1435 
        7.86         6.02        17.36        28.34        19.17        43.53 
TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1471 
        8.55        12.46        45.14       105.99         9.11         1.18 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1548 TCGA-24-1549 TCGA-24-1551 TCGA-24-1552 
       22.19        26.96        16.21        56.58        51.91        41.39 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
       88.50        70.62        39.88        19.53        44.09        45.50 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 TCGA-24-1616 TCGA-24-1844 
       10.26        17.23        90.15        48.33        38.24         3.72 
TCGA-24-1845 TCGA-24-1846 TCGA-24-1930 TCGA-24-2020 TCGA-24-2023 TCGA-24-2026 
        3.81         4.37        81.11       151.99        44.84        34.82 
TCGA-24-2030 TCGA-24-2036 TCGA-24-2254 TCGA-24-2261 TCGA-24-2288 TCGA-24-2290 
       53.95        64.01        57.07         0.79         0.82        36.23 
TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1318 TCGA-25-1321 TCGA-25-1329 
        1.02        31.99        51.06        34.98        33.96         2.96 
TCGA-25-1627 TCGA-25-1631 TCGA-25-1635 TCGA-25-1878 TCGA-25-2393 TCGA-25-2396 
        0.36         0.30        51.22        85.05        38.04         3.02 
TCGA-25-2397 TCGA-25-2400 TCGA-25-2409 TCGA-29-1688 TCGA-29-1691 TCGA-29-1693 
       12.00        42.02        26.96        78.87        47.18       101.75 
TCGA-29-1695 TCGA-29-1697 TCGA-29-1698 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 
        0.79        31.17        68.28        18.64        59.67        18.25 
TCGA-29-1707 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1764 TCGA-29-1774 
       41.95        34.62        17.00        85.68        62.93        17.29 
TCGA-29-1775 TCGA-29-1778 TCGA-29-1781 TCGA-29-2428 TCGA-29-2431 TCGA-29-2434 
       12.36        14.93         8.35        45.11        42.25        11.47 
TCGA-29-2435 TCGA-30-1859 TCGA-30-1869 TCGA-31-1951 TCGA-31-1955 TCGA-36-1570 
        1.12        48.07        51.39        22.45        42.51        21.53 
TCGA-36-1571 TCGA-36-1578 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       22.85        27.85        35.05        33.01        29.49        29.79 
TCGA-36-2538 TCGA-36-2542 TCGA-36-2547 TCGA-36-2548 TCGA-36-2552 TCGA-42-2589 
       25.08        21.60        20.52        14.17        11.47         7.56 
TCGA-42-2593 TCGA-57-1586 TCGA-59-2348 TCGA-59-2352 TCGA-59-2372 TCGA-61-1724 
        1.48        22.32       180.16         9.40        44.78        20.94 
TCGA-61-1727 TCGA-61-1730 TCGA-61-1734 TCGA-61-1736 TCGA-61-1740 TCGA-61-1741 
       18.54         4.34        28.47        48.79         2.43        33.67 
TCGA-61-1743 TCGA-61-1899 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1915 
       43.69         8.42        37.02        42.48        48.92        67.73 
TCGA-61-1918 TCGA-61-1995 TCGA-61-2000 TCGA-61-2009 TCGA-61-2018 TCGA-61-2087 
       15.75         1.97        14.50        39.85        45.40         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2096 TCGA-61-2104 TCGA-61-2109 
        4.77        51.72        58.39        76.83        20.68 

$subtype3
TCGA-04-1343 TCGA-04-1362 TCGA-04-1370 TCGA-04-1644 TCGA-04-1648 TCGA-04-1654 
       11.87        44.32        59.97        48.89        28.64        47.70 
TCGA-09-1662 TCGA-09-1674 TCGA-09-2045 TCGA-10-0926 TCGA-13-0886 TCGA-13-0897 
       89.33         8.55        35.15        25.91        74.27        57.47 
TCGA-13-0911 TCGA-13-1405 TCGA-13-1507 TCGA-13-1509 TCGA-20-1682 TCGA-23-1124 
       27.68         7.36         4.77         4.14        27.48        58.13 
TCGA-23-2081 TCGA-23-2647 TCGA-24-1422 TCGA-24-1423 TCGA-24-1434 TCGA-24-1463 
       77.00         4.44         0.76         6.25        18.67        72.92 
TCGA-24-1470 TCGA-24-1550 TCGA-24-1564 TCGA-24-1604 TCGA-24-1849 TCGA-24-1920 
        3.42        41.06        25.87        88.34         5.75         9.80 
TCGA-24-1927 TCGA-24-2024 TCGA-24-2289 TCGA-24-2295 TCGA-25-1313 TCGA-25-1316 
       16.41        58.16        67.36        33.11        26.93        37.02 
TCGA-25-1320 TCGA-25-1325 TCGA-25-1328 TCGA-25-1625 TCGA-25-1626 TCGA-25-1628 
       36.95        32.09        65.06        18.02        15.78        20.58 
TCGA-25-1632 TCGA-25-1633 TCGA-25-2391 TCGA-25-2399 TCGA-25-2401 TCGA-29-1694 
       56.94        60.59        49.05        19.99         2.96        38.53 
TCGA-29-1696 TCGA-29-1699 TCGA-29-1701 TCGA-29-1766 TCGA-29-1769 TCGA-29-1770 
       33.70         0.53        16.90        39.09        22.98        24.36 
TCGA-29-1777 TCGA-29-1783 TCGA-29-1785 TCGA-29-2432 TCGA-29-2436 TCGA-30-1718 
       12.30         7.20        34.62        11.84         9.76        51.91 
TCGA-30-1855 TCGA-30-1860 TCGA-30-1861 TCGA-30-1887 TCGA-30-1891 TCGA-31-1946 
        2.47        44.91        34.78        24.26        30.05        30.18 
TCGA-36-1576 TCGA-36-2544 TCGA-36-2545 TCGA-36-2551 TCGA-42-2582 TCGA-42-2588 
       30.05        20.98        18.31        16.14        26.04         9.44 
TCGA-42-2590 TCGA-59-2349 TCGA-59-2354 TCGA-61-1721 TCGA-61-1733 TCGA-61-1738 
        7.46        80.12        34.39        11.11        31.76        35.80 
TCGA-61-1895 TCGA-61-1914 TCGA-61-2017 TCGA-61-2102 TCGA-61-2612 TCGA-61-2614 
        1.41        56.58        45.96         6.48         6.35         8.58 

subtype1 subtype2 subtype3 
    0.36     0.30     0.53 
subtype1 subtype2 subtype3 
  125.72   180.16    89.33 
subtype1 subtype2 subtype3 
  31.055   22.850   27.205 
[1] "0.4 - 125.7 (31.1)" "0.3 - 180.2 (22.9)" "0.5 - 89.3 (27.2)" 
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
  [7] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [25] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [37] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
 [43] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
 [49] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [55] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [61] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [67] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [85] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[109] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[133] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[139] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[145] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[157] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[163] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[169] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[175] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[181] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[193] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[199] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[205] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[217] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[223] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[229] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[235] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[241] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[247] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[253] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[259] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[265] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[271] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[277] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[283] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[289] "subtype1" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[295] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[301] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[307] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[313] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[319] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[325] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[331] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[337] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[343] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[349] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[355] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[367] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[373] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[379] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[385] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[391] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[397] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
  [7] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [25] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [37] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
 [43] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
 [49] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [55] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [61] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [67] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [85] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[109] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[133] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[139] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[145] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[157] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[163] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[169] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[175] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[181] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[193] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[199] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[205] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[217] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[223] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[229] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[235] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[241] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[247] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[253] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[259] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[265] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[271] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[277] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[283] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[289] "subtype1" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[295] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[301] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[307] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[313] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[319] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[325] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[331] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[337] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[343] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[349] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[355] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[367] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[373] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[379] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[385] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[391] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[397] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
  [7] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
 [13] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [19] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [25] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [37] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
 [43] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
 [49] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [55] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [61] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [67] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [73] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [85] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[109] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[133] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[139] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[145] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[151] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[157] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[163] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype1"
[169] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[175] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[181] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[193] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype1"
[199] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[205] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[211] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[217] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[223] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[229] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[235] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[241] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[247] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype3"
[253] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[259] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[265] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[271] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[277] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[283] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype1"
[289] "subtype1" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[295] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[301] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[307] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[313] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
[319] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[325] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[331] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[337] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
[343] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[349] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[355] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[361] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[367] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[373] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[379] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[385] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype2"
[391] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[397] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
D7V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       1   122                0
  subtype2       1   197                1
  subtype3       0    84                1
D7V3, multiclass
D7V4, continuous
D7V5, binary
          cls
clus         0   1
  subtype1   2 121
  subtype2   0 199
  subtype3   0  85
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    2  121
  subtype2    0  199
  subtype3    0   85
     clus
vv    subtype1 subtype2 subtype3
  NO         2        0        0
  YES      121      199       85
          vv
clus       R0 R1 R2
  subtype1  2 10  0
  subtype2  8  9  1
  subtype3  3  9  1
D7V6, multiclass

Clustering(8) Variable = RPPA_CHIERARCHICAL
D8V1, survival
          sevent
clus2       0  1
  subtype1 25 35
  subtype2 43 40
  subtype3 61 47
  subtype4 60 90
subtype1 subtype2 subtype3 subtype4 
      60       83      108      150 
subtype1 subtype2 subtype3 subtype4 
      35       40       47       90 
$subtype1
TCGA-04-1343 TCGA-04-1356 TCGA-04-1362 TCGA-04-1369 TCGA-04-1370 TCGA-04-1648 
       11.87        49.28        44.32        21.11        59.97        28.64 
TCGA-04-1654 TCGA-09-2045 TCGA-09-2055 TCGA-13-0720 TCGA-13-0891 TCGA-13-0897 
       47.70        35.15        26.93        44.55        69.01        57.47 
TCGA-13-0899 TCGA-13-1495 TCGA-13-1496 TCGA-13-1507 TCGA-13-1509 TCGA-23-1111 
       56.15        49.22         4.24         4.77         4.14         3.22 
TCGA-23-1124 TCGA-23-2641 TCGA-24-1103 TCGA-24-1422 TCGA-24-1435 TCGA-24-1436 
       58.13         2.76        54.08         0.76        43.53         8.55 
TCGA-24-1466 TCGA-24-1469 TCGA-24-1470 TCGA-24-1920 TCGA-24-1927 TCGA-24-1930 
       45.14         9.11         3.42         9.80        16.41        81.11 
TCGA-24-2024 TCGA-24-2026 TCGA-24-2030 TCGA-24-2261 TCGA-24-2289 TCGA-24-2290 
       58.16        34.82        53.95         0.79        67.36        36.23 
TCGA-24-2295 TCGA-25-1320 TCGA-25-1632 TCGA-25-2399 TCGA-25-2409 TCGA-29-1694 
       33.11        36.95        56.94        19.99        26.96        38.53 
TCGA-29-1695 TCGA-29-1698 TCGA-29-1705 TCGA-29-1711 TCGA-29-2435 TCGA-30-1860 
        0.79        68.28        18.25        34.62         1.12        44.91 
TCGA-30-1861 TCGA-31-1951 TCGA-36-2544 TCGA-36-2545 TCGA-42-2582 TCGA-42-2589 
       34.78        22.45        20.98        18.31        26.04         7.56 
TCGA-59-2348 TCGA-61-1727 TCGA-61-1738 TCGA-61-1743 TCGA-61-1910 TCGA-61-1914 
      180.16        18.54        35.80        43.69        37.02        56.58 

$subtype2
TCGA-04-1336 TCGA-04-1361 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1646 
       49.15        32.52        56.55        41.59        19.99        27.88 
TCGA-04-1649 TCGA-09-1666 TCGA-09-1670 TCGA-09-1673 TCGA-09-2043 TCGA-09-2051 
       64.64        57.57        17.98         3.02         6.15        63.09 
TCGA-10-0931 TCGA-13-0799 TCGA-13-0801 TCGA-13-0916 TCGA-13-2059 TCGA-20-1687 
       32.28         7.79         8.28        21.14        12.23         2.66 
TCGA-23-1109 TCGA-23-1123 TCGA-23-2077 TCGA-23-2079 TCGA-23-2081 TCGA-23-2649 
       51.35        33.47       115.89        91.66        77.00         3.81 
TCGA-24-1416 TCGA-24-1419 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1471 
        6.38         7.86        17.36        28.34        19.17         1.18 
TCGA-24-1548 TCGA-24-1549 TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 TCGA-24-1557 
       16.21        56.58        51.91        41.39        88.50        39.88 
TCGA-24-1560 TCGA-24-1565 TCGA-24-1603 TCGA-24-1604 TCGA-24-1616 TCGA-24-1844 
       44.09        10.26        90.15        88.34        38.24         3.72 
TCGA-24-1846 TCGA-24-2036 TCGA-24-2254 TCGA-25-1312 TCGA-25-1314 TCGA-25-1321 
        4.37        64.01        57.07         1.02        31.99        33.96 
TCGA-25-1625 TCGA-25-1631 TCGA-25-2391 TCGA-25-2396 TCGA-25-2397 TCGA-25-2400 
       18.02         0.30        49.05         3.02        12.00        42.02 
TCGA-29-1688 TCGA-29-1696 TCGA-29-1702 TCGA-29-1761 TCGA-29-1775 TCGA-29-1778 
       78.87        33.70        18.64        17.00        12.36        14.93 
TCGA-30-1859 TCGA-31-1955 TCGA-36-1570 TCGA-36-1578 TCGA-36-2532 TCGA-36-2534 
       48.07        42.51        21.53        27.85        29.49        29.79 
TCGA-36-2547 TCGA-36-2549 TCGA-36-2551 TCGA-59-2352 TCGA-61-1730 TCGA-61-1736 
       20.52         6.05        16.14         9.40         4.34        48.79 
TCGA-61-1899 TCGA-61-1913 TCGA-61-1915 TCGA-61-1995 TCGA-61-2018 TCGA-61-2087 
        8.42        48.92        67.73         1.97        45.40         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2096 TCGA-61-2104 TCGA-61-2109 
        4.77        51.72        58.39        76.83        20.68 

$subtype3
TCGA-04-1348 TCGA-04-1644 TCGA-04-1651 TCGA-09-1674 TCGA-09-2044 TCGA-09-2054 
       48.76        48.89        36.23         8.55         6.12        20.91 
TCGA-09-2056 TCGA-10-0936 TCGA-13-0725 TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 
       12.46        35.80        12.39        28.70        30.35         8.71 
TCGA-13-0802 TCGA-13-0804 TCGA-13-0884 TCGA-13-0887 TCGA-13-0888 TCGA-13-0901 
        8.19        35.28       107.18        66.64        70.39        19.36 
TCGA-13-0903 TCGA-13-0910 TCGA-13-0920 TCGA-13-0921 TCGA-13-1404 TCGA-13-1410 
       47.38        37.08        13.81         4.64         6.61         4.70 
TCGA-13-1482 TCGA-13-1484 TCGA-13-1487 TCGA-13-1489 TCGA-13-1492 TCGA-13-1499 
       61.71        98.04        22.39        82.88        73.55        38.37 
TCGA-13-1504 TCGA-13-1506 TCGA-13-1511 TCGA-13-1512 TCGA-13-2060 TCGA-13-2061 
       16.57         4.41         3.88         3.09         8.58        10.78 
TCGA-13-2066 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-23-1110 TCGA-23-1121 
        9.70        19.07        16.67         2.93        54.51         6.38 
TCGA-23-1809 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0970 TCGA-24-1104 
        0.53         4.70         4.50         7.63        11.64        63.55 
TCGA-24-1105 TCGA-24-1417 TCGA-24-1424 TCGA-24-1464 TCGA-24-1467 TCGA-24-1474 
       47.41         7.82         6.02        12.46       105.99        22.19 
TCGA-24-1556 TCGA-24-1558 TCGA-24-1614 TCGA-24-1842 TCGA-24-1845 TCGA-24-2020 
       70.62        19.53        48.33         8.32         3.81       151.99 
TCGA-24-2023 TCGA-24-2260 TCGA-24-2267 TCGA-25-1315 TCGA-25-1316 TCGA-25-1318 
       44.84        36.16        47.54        51.06        37.02        34.98 
TCGA-25-1326 TCGA-25-1329 TCGA-25-1627 TCGA-25-1635 TCGA-25-1878 TCGA-25-2404 
       31.04         2.96         0.36        51.22        85.05        29.00 
TCGA-29-1691 TCGA-29-1693 TCGA-29-1697 TCGA-29-1703 TCGA-29-1762 TCGA-29-1764 
       47.18       101.75        31.17        59.67        85.68        62.93 
TCGA-29-1781 TCGA-29-2427 TCGA-29-2428 TCGA-29-2434 TCGA-30-1869 TCGA-36-1571 
        8.35        62.47        45.11        11.47        51.39        22.85 
TCGA-36-1575 TCGA-36-1577 TCGA-36-2529 TCGA-36-2530 TCGA-36-2537 TCGA-36-2538 
        8.55        25.74        35.05        33.01        25.91        25.08 
TCGA-36-2542 TCGA-36-2548 TCGA-36-2552 TCGA-42-2593 TCGA-57-1586 TCGA-59-2349 
       21.60        14.17        11.47         1.48        22.32        80.12 
TCGA-59-2372 TCGA-61-1724 TCGA-61-1733 TCGA-61-1734 TCGA-61-1740 TCGA-61-1741 
       44.78        20.94        31.76        28.47         2.43        33.67 
TCGA-61-1903 TCGA-61-1911 TCGA-61-2000 TCGA-61-2009 TCGA-61-2101 TCGA-61-2102 
       13.02        42.48        14.50        39.85        55.50         6.48 

$subtype4
TCGA-04-1335 TCGA-04-1338 TCGA-04-1342 TCGA-04-1349 TCGA-04-1525 TCGA-04-1542 
        1.81        46.62        18.51        21.57        38.37        84.20 
TCGA-04-1638 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-2049 TCGA-10-0925 
       55.40        89.33        74.89        41.59       112.37        54.31 
TCGA-10-0926 TCGA-10-0933 TCGA-13-0800 TCGA-13-0886 TCGA-13-0894 TCGA-13-0906 
       25.91        11.70         8.12        74.27        49.61        44.94 
TCGA-13-0911 TCGA-13-0913 TCGA-13-1405 TCGA-13-1408 TCGA-13-1409 TCGA-13-1411 
       27.68        29.98         7.36         5.92         6.84         4.21 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1483 TCGA-13-1488 TCGA-13-1491 
        5.33        54.61        87.06        29.39        70.82        52.44 
TCGA-13-1494 TCGA-13-1498 TCGA-13-1500 TCGA-13-1501 TCGA-13-1505 TCGA-13-2065 
       38.17        37.61        13.97        32.84         4.21         8.75 
TCGA-20-1682 TCGA-20-1683 TCGA-23-1122 TCGA-23-2078 TCGA-23-2647 TCGA-24-0979 
       27.48        25.38        39.09        87.48         4.44        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1423 TCGA-24-1427 TCGA-24-1434 TCGA-24-1463 
        7.66        22.32         6.25         4.80        18.67        72.92 
TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1550 TCGA-24-1553 TCGA-24-1562 
       26.96        57.37        64.27        41.06        58.09        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1567 TCGA-24-1849 TCGA-24-1850 TCGA-24-1923 
       47.70        25.87        17.23         5.75         5.49        22.65 
TCGA-24-1924 TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 TCGA-24-2038 TCGA-24-2262 
       30.21       109.68        14.43        18.48        44.48         0.36 
TCGA-24-2271 TCGA-24-2281 TCGA-24-2288 TCGA-24-2293 TCGA-24-2297 TCGA-24-2298 
       31.63        44.58         0.82        16.64        55.86        53.26 
TCGA-25-1313 TCGA-25-1319 TCGA-25-1322 TCGA-25-1323 TCGA-25-1325 TCGA-25-1328 
       26.93        65.00         2.99        12.00        32.09        65.06 
TCGA-25-1623 TCGA-25-1626 TCGA-25-1628 TCGA-25-1630 TCGA-25-1633 TCGA-25-2042 
       18.58        15.78        20.58         7.86        60.59        13.02 
TCGA-25-2393 TCGA-25-2398 TCGA-25-2401 TCGA-25-2408 TCGA-29-1690 TCGA-29-1699 
       38.04        45.01         2.96        30.97        44.71         0.53 
TCGA-29-1701 TCGA-29-1707 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 
       16.90        41.95        39.09        31.23        22.98        24.36 
TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 TCGA-29-1777 TCGA-29-1783 TCGA-29-1785 
       22.52        17.29        11.84        12.30         7.20        34.62 
TCGA-29-2425 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2436 TCGA-30-1718 
       65.00         4.87        42.25        11.84         9.76        51.91 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 
        2.47        15.68        24.26        30.05        48.79        45.57 
TCGA-31-1946 TCGA-31-1950 TCGA-36-1568 TCGA-36-1569 TCGA-36-1576 TCGA-36-1580 
       30.18        18.77        28.73        29.06        30.05        24.23 
TCGA-36-1581 TCGA-36-2540 TCGA-36-2543 TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 
       24.69        23.80         2.24        23.74         9.44         7.46 
TCGA-42-2591 TCGA-59-2351 TCGA-59-2354 TCGA-59-2363 TCGA-61-1721 TCGA-61-1722 
       22.39       116.12        34.39         5.39        11.11         8.05 
TCGA-61-1895 TCGA-61-1900 TCGA-61-1906 TCGA-61-1907 TCGA-61-1918 TCGA-61-1919 
        1.41         5.79        34.13        31.30        15.75        38.17 
TCGA-61-2003 TCGA-61-2012 TCGA-61-2017 TCGA-61-2094 TCGA-61-2095 TCGA-61-2098 
        3.98        30.64        45.96        71.74        61.64        65.49 
TCGA-61-2111 TCGA-61-2113 TCGA-61-2610 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
      125.72        22.22        51.91         6.35        31.07         8.58 

subtype1 subtype2 subtype3 subtype4 
    0.76     0.30     0.36     0.36 
subtype1 subtype2 subtype3 subtype4 
  180.16   115.89   151.99   125.72 
subtype1 subtype2 subtype3 subtype4 
  34.800   28.340   25.825   27.220 
[1] "0.8 - 180.2 (34.8)" "0.3 - 115.9 (28.3)" "0.4 - 152.0 (25.8)"
[4] "0.4 - 125.7 (27.2)"
  [1] "subtype4" "subtype2" "subtype4" "subtype4" "subtype1" "subtype3"
  [7] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [13] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
 [19] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
 [25] "subtype4" "subtype4" "subtype4" "subtype2" "subtype2" "subtype2"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype4" "subtype2"
 [37] "subtype3" "subtype1" "subtype3" "subtype4" "subtype4" "subtype2"
 [43] "subtype4" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [49] "subtype3" "subtype2" "subtype4" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype4" "subtype3" "subtype3" "subtype1" "subtype4"
 [61] "subtype1" "subtype1" "subtype3" "subtype3" "subtype4" "subtype3"
 [67] "subtype4" "subtype4" "subtype2" "subtype3" "subtype3" "subtype3"
 [73] "subtype4" "subtype4" "subtype4" "subtype3" "subtype4" "subtype4"
 [79] "subtype4" "subtype4" "subtype3" "subtype4" "subtype3" "subtype3"
 [85] "subtype4" "subtype3" "subtype4" "subtype3" "subtype4" "subtype1"
 [91] "subtype1" "subtype4" "subtype3" "subtype4" "subtype4" "subtype3"
 [97] "subtype4" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[103] "subtype2" "subtype3" "subtype3" "subtype4" "subtype3" "subtype4"
[109] "subtype4" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[115] "subtype3" "subtype1" "subtype3" "subtype4" "subtype2" "subtype1"
[121] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype1"
[127] "subtype3" "subtype3" "subtype4" "subtype2" "subtype3" "subtype3"
[133] "subtype4" "subtype4" "subtype4" "subtype1" "subtype3" "subtype3"
[139] "subtype2" "subtype3" "subtype2" "subtype1" "subtype4" "subtype3"
[145] "subtype4" "subtype2" "subtype2" "subtype2" "subtype4" "subtype1"
[151] "subtype1" "subtype4" "subtype3" "subtype1" "subtype3" "subtype1"
[157] "subtype1" "subtype2" "subtype3" "subtype4" "subtype4" "subtype4"
[163] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype4"
[175] "subtype4" "subtype4" "subtype2" "subtype4" "subtype2" "subtype2"
[181] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[187] "subtype4" "subtype4" "subtype1" "subtype4" "subtype4" "subtype1"
[193] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype4"
[199] "subtype4" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[205] "subtype3" "subtype1" "subtype4" "subtype3" "subtype4" "subtype4"
[211] "subtype4" "subtype1" "subtype1" "subtype4" "subtype1" "subtype4"
[217] "subtype4" "subtype2" "subtype4" "subtype2" "subtype3" "subtype3"
[223] "subtype3" "subtype4" "subtype1" "subtype2" "subtype4" "subtype4"
[229] "subtype4" "subtype3" "subtype4" "subtype3" "subtype4" "subtype2"
[235] "subtype4" "subtype3" "subtype4" "subtype4" "subtype2" "subtype1"
[241] "subtype4" "subtype3" "subtype3" "subtype4" "subtype2" "subtype4"
[247] "subtype2" "subtype2" "subtype4" "subtype1" "subtype2" "subtype4"
[253] "subtype3" "subtype4" "subtype1" "subtype2" "subtype4" "subtype3"
[259] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[265] "subtype4" "subtype4" "subtype2" "subtype3" "subtype1" "subtype4"
[271] "subtype1" "subtype2" "subtype3" "subtype3" "subtype4" "subtype4"
[277] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype4"
[283] "subtype4" "subtype2" "subtype3" "subtype4" "subtype4" "subtype4"
[289] "subtype3" "subtype3" "subtype4" "subtype4" "subtype4" "subtype3"
[295] "subtype1" "subtype4" "subtype4" "subtype4" "subtype4" "subtype2"
[301] "subtype1" "subtype1" "subtype3" "subtype4" "subtype4" "subtype4"
[307] "subtype4" "subtype4" "subtype4" "subtype1" "subtype2" "subtype4"
[313] "subtype4" "subtype2" "subtype3" "subtype3" "subtype4" "subtype3"
[319] "subtype2" "subtype4" "subtype4" "subtype3" "subtype3" "subtype2"
[325] "subtype2" "subtype3" "subtype3" "subtype4" "subtype3" "subtype4"
[331] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[337] "subtype3" "subtype1" "subtype4" "subtype4" "subtype1" "subtype4"
[343] "subtype4" "subtype3" "subtype3" "subtype1" "subtype3" "subtype4"
[349] "subtype2" "subtype4" "subtype4" "subtype3" "subtype4" "subtype4"
[355] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[361] "subtype1" "subtype3" "subtype3" "subtype1" "subtype4" "subtype2"
[367] "subtype4" "subtype3" "subtype4" "subtype4" "subtype1" "subtype3"
[373] "subtype2" "subtype1" "subtype2" "subtype4" "subtype4" "subtype2"
[379] "subtype3" "subtype4" "subtype3" "subtype4" "subtype4" "subtype2"
[385] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype2"
[391] "subtype4" "subtype3" "subtype3" "subtype2" "subtype2" "subtype4"
[397] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
  [1] "subtype4" "subtype2" "subtype4" "subtype4" "subtype1" "subtype3"
  [7] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [13] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
 [19] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
 [25] "subtype4" "subtype4" "subtype4" "subtype2" "subtype2" "subtype2"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype4" "subtype2"
 [37] "subtype3" "subtype1" "subtype3" "subtype4" "subtype4" "subtype2"
 [43] "subtype4" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [49] "subtype3" "subtype2" "subtype4" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype4" "subtype3" "subtype3" "subtype1" "subtype4"
 [61] "subtype1" "subtype1" "subtype3" "subtype3" "subtype4" "subtype3"
 [67] "subtype4" "subtype4" "subtype2" "subtype3" "subtype3" "subtype3"
 [73] "subtype4" "subtype4" "subtype4" "subtype3" "subtype4" "subtype4"
 [79] "subtype4" "subtype4" "subtype3" "subtype4" "subtype3" "subtype3"
 [85] "subtype4" "subtype3" "subtype4" "subtype3" "subtype4" "subtype1"
 [91] "subtype1" "subtype4" "subtype3" "subtype4" "subtype4" "subtype3"
 [97] "subtype4" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[103] "subtype2" "subtype3" "subtype3" "subtype4" "subtype3" "subtype4"
[109] "subtype4" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[115] "subtype3" "subtype1" "subtype3" "subtype4" "subtype2" "subtype1"
[121] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype1"
[127] "subtype3" "subtype3" "subtype4" "subtype2" "subtype3" "subtype3"
[133] "subtype4" "subtype4" "subtype4" "subtype1" "subtype3" "subtype3"
[139] "subtype2" "subtype3" "subtype2" "subtype1" "subtype4" "subtype3"
[145] "subtype4" "subtype2" "subtype2" "subtype2" "subtype4" "subtype1"
[151] "subtype1" "subtype4" "subtype3" "subtype1" "subtype3" "subtype1"
[157] "subtype1" "subtype2" "subtype3" "subtype4" "subtype4" "subtype4"
[163] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype4"
[175] "subtype4" "subtype4" "subtype2" "subtype4" "subtype2" "subtype2"
[181] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[187] "subtype4" "subtype4" "subtype1" "subtype4" "subtype4" "subtype1"
[193] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype4"
[199] "subtype4" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[205] "subtype3" "subtype1" "subtype4" "subtype3" "subtype4" "subtype4"
[211] "subtype4" "subtype1" "subtype1" "subtype4" "subtype1" "subtype4"
[217] "subtype4" "subtype2" "subtype4" "subtype2" "subtype3" "subtype3"
[223] "subtype3" "subtype4" "subtype1" "subtype2" "subtype4" "subtype4"
[229] "subtype4" "subtype3" "subtype4" "subtype3" "subtype4" "subtype2"
[235] "subtype4" "subtype3" "subtype4" "subtype4" "subtype2" "subtype1"
[241] "subtype4" "subtype3" "subtype3" "subtype4" "subtype2" "subtype4"
[247] "subtype2" "subtype2" "subtype4" "subtype1" "subtype2" "subtype4"
[253] "subtype3" "subtype4" "subtype1" "subtype2" "subtype4" "subtype3"
[259] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[265] "subtype4" "subtype4" "subtype2" "subtype3" "subtype1" "subtype4"
[271] "subtype1" "subtype2" "subtype3" "subtype3" "subtype4" "subtype4"
[277] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype4"
[283] "subtype4" "subtype2" "subtype3" "subtype4" "subtype4" "subtype4"
[289] "subtype3" "subtype3" "subtype4" "subtype4" "subtype4" "subtype3"
[295] "subtype1" "subtype4" "subtype4" "subtype4" "subtype4" "subtype2"
[301] "subtype1" "subtype1" "subtype3" "subtype4" "subtype4" "subtype4"
[307] "subtype4" "subtype4" "subtype4" "subtype1" "subtype2" "subtype4"
[313] "subtype4" "subtype2" "subtype3" "subtype3" "subtype4" "subtype3"
[319] "subtype2" "subtype4" "subtype4" "subtype3" "subtype3" "subtype2"
[325] "subtype2" "subtype3" "subtype3" "subtype4" "subtype3" "subtype4"
[331] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[337] "subtype3" "subtype1" "subtype4" "subtype4" "subtype1" "subtype4"
[343] "subtype4" "subtype3" "subtype3" "subtype1" "subtype3" "subtype4"
[349] "subtype2" "subtype4" "subtype4" "subtype3" "subtype4" "subtype4"
[355] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[361] "subtype1" "subtype3" "subtype3" "subtype1" "subtype4" "subtype2"
[367] "subtype4" "subtype3" "subtype4" "subtype4" "subtype1" "subtype3"
[373] "subtype2" "subtype1" "subtype2" "subtype4" "subtype4" "subtype2"
[379] "subtype3" "subtype4" "subtype3" "subtype4" "subtype4" "subtype2"
[385] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype2"
[391] "subtype4" "subtype3" "subtype3" "subtype2" "subtype2" "subtype4"
[397] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
  [1] "subtype4" "subtype2" "subtype4" "subtype4" "subtype1" "subtype3"
  [7] "subtype4" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [13] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype4"
 [19] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype1"
 [25] "subtype4" "subtype4" "subtype4" "subtype2" "subtype2" "subtype2"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype4" "subtype2"
 [37] "subtype3" "subtype1" "subtype3" "subtype4" "subtype4" "subtype2"
 [43] "subtype4" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [49] "subtype3" "subtype2" "subtype4" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype4" "subtype3" "subtype3" "subtype1" "subtype4"
 [61] "subtype1" "subtype1" "subtype3" "subtype3" "subtype4" "subtype3"
 [67] "subtype4" "subtype4" "subtype2" "subtype3" "subtype3" "subtype3"
 [73] "subtype4" "subtype4" "subtype4" "subtype3" "subtype4" "subtype4"
 [79] "subtype4" "subtype4" "subtype3" "subtype4" "subtype3" "subtype3"
 [85] "subtype4" "subtype3" "subtype4" "subtype3" "subtype4" "subtype1"
 [91] "subtype1" "subtype4" "subtype3" "subtype4" "subtype4" "subtype3"
 [97] "subtype4" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[103] "subtype2" "subtype3" "subtype3" "subtype4" "subtype3" "subtype4"
[109] "subtype4" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[115] "subtype3" "subtype1" "subtype3" "subtype4" "subtype2" "subtype1"
[121] "subtype3" "subtype2" "subtype4" "subtype2" "subtype2" "subtype1"
[127] "subtype3" "subtype3" "subtype4" "subtype2" "subtype3" "subtype3"
[133] "subtype4" "subtype4" "subtype4" "subtype1" "subtype3" "subtype3"
[139] "subtype2" "subtype3" "subtype2" "subtype1" "subtype4" "subtype3"
[145] "subtype4" "subtype2" "subtype2" "subtype2" "subtype4" "subtype1"
[151] "subtype1" "subtype4" "subtype3" "subtype1" "subtype3" "subtype1"
[157] "subtype1" "subtype2" "subtype3" "subtype4" "subtype4" "subtype4"
[163] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype4"
[169] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype4"
[175] "subtype4" "subtype4" "subtype2" "subtype4" "subtype2" "subtype2"
[181] "subtype3" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[187] "subtype4" "subtype4" "subtype1" "subtype4" "subtype4" "subtype1"
[193] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype4"
[199] "subtype4" "subtype1" "subtype4" "subtype2" "subtype4" "subtype2"
[205] "subtype3" "subtype1" "subtype4" "subtype3" "subtype4" "subtype4"
[211] "subtype4" "subtype1" "subtype1" "subtype4" "subtype1" "subtype4"
[217] "subtype4" "subtype2" "subtype4" "subtype2" "subtype3" "subtype3"
[223] "subtype3" "subtype4" "subtype1" "subtype2" "subtype4" "subtype4"
[229] "subtype4" "subtype3" "subtype4" "subtype3" "subtype4" "subtype2"
[235] "subtype4" "subtype3" "subtype4" "subtype4" "subtype2" "subtype1"
[241] "subtype4" "subtype3" "subtype3" "subtype4" "subtype2" "subtype4"
[247] "subtype2" "subtype2" "subtype4" "subtype1" "subtype2" "subtype4"
[253] "subtype3" "subtype4" "subtype1" "subtype2" "subtype4" "subtype3"
[259] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[265] "subtype4" "subtype4" "subtype2" "subtype3" "subtype1" "subtype4"
[271] "subtype1" "subtype2" "subtype3" "subtype3" "subtype4" "subtype4"
[277] "subtype4" "subtype4" "subtype4" "subtype4" "subtype2" "subtype4"
[283] "subtype4" "subtype2" "subtype3" "subtype4" "subtype4" "subtype4"
[289] "subtype3" "subtype3" "subtype4" "subtype4" "subtype4" "subtype3"
[295] "subtype1" "subtype4" "subtype4" "subtype4" "subtype4" "subtype2"
[301] "subtype1" "subtype1" "subtype3" "subtype4" "subtype4" "subtype4"
[307] "subtype4" "subtype4" "subtype4" "subtype1" "subtype2" "subtype4"
[313] "subtype4" "subtype2" "subtype3" "subtype3" "subtype4" "subtype3"
[319] "subtype2" "subtype4" "subtype4" "subtype3" "subtype3" "subtype2"
[325] "subtype2" "subtype3" "subtype3" "subtype4" "subtype3" "subtype4"
[331] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[337] "subtype3" "subtype1" "subtype4" "subtype4" "subtype1" "subtype4"
[343] "subtype4" "subtype3" "subtype3" "subtype1" "subtype3" "subtype4"
[349] "subtype2" "subtype4" "subtype4" "subtype3" "subtype4" "subtype4"
[355] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[361] "subtype1" "subtype3" "subtype3" "subtype1" "subtype4" "subtype2"
[367] "subtype4" "subtype3" "subtype4" "subtype4" "subtype1" "subtype3"
[373] "subtype2" "subtype1" "subtype2" "subtype4" "subtype4" "subtype2"
[379] "subtype3" "subtype4" "subtype3" "subtype4" "subtype4" "subtype2"
[385] "subtype2" "subtype2" "subtype2" "subtype4" "subtype4" "subtype2"
[391] "subtype4" "subtype3" "subtype3" "subtype2" "subtype2" "subtype4"
[397] "subtype4" "subtype4" "subtype4" "subtype4" "subtype4"
D8V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       1    59                0
  subtype2       0    86                0
  subtype3       0   108                1
  subtype4       1   150                1
D8V3, multiclass
D8V4, continuous
D8V5, binary
          cls
clus         0   1
  subtype1   0  60
  subtype2   0  86
  subtype3   1 108
  subtype4   1 151
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    0   60
  subtype2    0   86
  subtype3    1  108
  subtype4    1  151
     clus
vv    subtype1 subtype2 subtype3 subtype4
  NO         0        0        1        1
  YES       60       86      108      151
          vv
clus       R0 R1 R2
  subtype1  3  4  0
  subtype2  4  2  0
  subtype3  3  9  1
  subtype4  3 13  1
D8V6, multiclass

Clustering(9) Variable = MRNASEQ_CNMF
D9V1, survival
          sevent
clus2       0  1
  subtype1 47 55
  subtype2 30 36
  subtype3 35 56
subtype1 subtype2 subtype3 
     102       66       91 
subtype1 subtype2 subtype3 
      55       36       56 
$subtype1
TCGA-04-1348 TCGA-09-1662 TCGA-09-1667 TCGA-09-1668 TCGA-09-2044 TCGA-13-0890 
       48.76        89.33        61.87        55.36         6.12        67.99 
TCGA-13-0893 TCGA-13-0897 TCGA-13-0924 TCGA-13-1403 TCGA-13-1405 TCGA-13-1410 
       43.36        57.47         6.08        10.88         7.36         4.70 
TCGA-13-1481 TCGA-13-1497 TCGA-13-1498 TCGA-13-1507 TCGA-13-1511 TCGA-13-1512 
       87.06        54.31        37.61         4.77         3.88         3.09 
TCGA-13-2060 TCGA-20-1682 TCGA-20-1687 TCGA-23-1026 TCGA-23-1027 TCGA-23-1109 
        8.58        27.48         2.66        26.83        31.73        51.35 
TCGA-23-1120 TCGA-24-0975 TCGA-24-1417 TCGA-24-1418 TCGA-24-1427 TCGA-24-1428 
        4.27        21.80         7.82         7.99         4.80        17.36 
TCGA-24-1436 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1562 TCGA-24-1563 
        8.55        51.91        41.39        58.09        45.50        47.70 
TCGA-24-1564 TCGA-24-1604 TCGA-24-1842 TCGA-24-1846 TCGA-24-1924 TCGA-24-1930 
       25.87        88.34         8.32         4.37        30.21        81.11 
TCGA-24-2024 TCGA-24-2026 TCGA-24-2035 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 
       58.16        34.82        28.18         0.79         0.36        47.54 
TCGA-24-2271 TCGA-24-2281 TCGA-24-2288 TCGA-24-2290 TCGA-24-2298 TCGA-25-1314 
       31.63        44.58         0.82        36.23        53.26        31.99 
TCGA-25-1318 TCGA-25-1322 TCGA-25-1326 TCGA-25-1328 TCGA-25-1329 TCGA-25-1623 
       34.98         2.99        31.04        65.06         2.96        18.58 
TCGA-25-1625 TCGA-25-1635 TCGA-25-2399 TCGA-25-2404 TCGA-25-2409 TCGA-29-1693 
       18.02        51.22        19.99        29.00        26.96       101.75 
TCGA-29-1695 TCGA-29-1699 TCGA-29-1701 TCGA-29-1705 TCGA-29-1710 TCGA-29-1711 
        0.79         0.53        16.90        18.25        29.23        34.62 
TCGA-29-1770 TCGA-29-1776 TCGA-29-1781 TCGA-29-1785 TCGA-29-2427 TCGA-29-2428 
       24.36        11.84         8.35        34.62        62.47        45.11 
TCGA-30-1718 TCGA-30-1855 TCGA-30-1860 TCGA-30-1862 TCGA-30-1891 TCGA-31-1951 
       51.91         2.47        44.91         6.08        30.05        22.45 
TCGA-31-1953 TCGA-31-1956 TCGA-36-1568 TCGA-36-1574 TCGA-36-1578 TCGA-36-1580 
        6.71        44.09        28.73        22.55        27.85        24.23 
TCGA-36-1581 TCGA-57-1582 TCGA-59-2348 TCGA-59-2351 TCGA-61-1725 TCGA-61-1740 
       24.69        24.03       180.16       116.12        31.40         2.43 
TCGA-61-1919 TCGA-61-2000 TCGA-61-2009 TCGA-61-2012 TCGA-61-2094 TCGA-61-2113 
       38.17        14.50        39.85        30.64        71.74        22.22 

$subtype2
TCGA-04-1362 TCGA-04-1365 TCGA-09-0366 TCGA-09-0367 TCGA-09-1666 TCGA-09-1670 
       44.32        76.54        57.73        17.95        57.57        17.98 
TCGA-09-2045 TCGA-09-2051 TCGA-09-2056 TCGA-10-0936 TCGA-13-0799 TCGA-13-0801 
       35.15        63.09        12.46        35.80         7.79         8.28 
TCGA-20-1685 TCGA-23-1023 TCGA-23-1029 TCGA-23-2081 TCGA-23-2084 TCGA-24-1103 
       16.67        40.54         8.81        77.00        49.84        54.08 
TCGA-24-1413 TCGA-24-1416 TCGA-24-1423 TCGA-24-1467 TCGA-24-1549 TCGA-24-1555 
        6.31         6.38         6.25       105.99        56.58        88.50 
TCGA-24-1556 TCGA-24-1557 TCGA-24-1616 TCGA-24-1844 TCGA-24-1847 TCGA-24-2019 
       70.62        39.88        38.24         3.72        11.28         4.87 
TCGA-24-2023 TCGA-24-2036 TCGA-24-2038 TCGA-24-2297 TCGA-25-1313 TCGA-25-1319 
       44.84        64.01        44.48        55.86        26.93        65.00 
TCGA-25-1321 TCGA-25-1630 TCGA-25-2391 TCGA-25-2392 TCGA-25-2396 TCGA-25-2397 
       33.96         7.86        49.05         1.02         3.02        12.00 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1694 TCGA-29-1696 TCGA-29-1778 TCGA-29-1784 
       78.87        44.71        38.53        33.70        14.93         5.36 
TCGA-31-1944 TCGA-36-1570 TCGA-57-1584 TCGA-57-1993 TCGA-59-2355 TCGA-61-1724 
       45.57        21.53        21.14        25.05         2.14        20.94 
TCGA-61-1728 TCGA-61-1736 TCGA-61-1907 TCGA-61-1910 TCGA-61-1914 TCGA-61-1918 
       27.88        48.79        31.30        37.02        56.58        15.75 
TCGA-61-2008 TCGA-61-2016 TCGA-61-2092 TCGA-61-2097 TCGA-61-2104 TCGA-61-2109 
       30.61         1.18        51.72        60.62        76.83        20.68 

$subtype3
TCGA-04-1364 TCGA-04-1514 TCGA-09-0364 TCGA-09-0369 TCGA-09-1669 TCGA-09-1673 
       33.67        56.55        29.16        35.54        30.48         3.02 
TCGA-09-1674 TCGA-09-2048 TCGA-09-2054 TCGA-10-0928 TCGA-13-0730 TCGA-13-0800 
        8.55         4.50        20.91        18.48        17.79         8.12 
TCGA-13-0899 TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 TCGA-13-1505 TCGA-13-1506 
       56.15        29.98        21.14        13.81         4.21         4.41 
TCGA-20-1683 TCGA-20-1684 TCGA-23-1111 TCGA-23-1114 TCGA-23-1122 TCGA-23-1123 
       25.38        19.07         3.22        68.68        39.09        33.47 
TCGA-23-1809 TCGA-23-2077 TCGA-24-1419 TCGA-24-1424 TCGA-24-1430 TCGA-24-1469 
        0.53       115.89         7.86         6.02        28.34         9.11 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1548 TCGA-24-1550 TCGA-24-1558 TCGA-24-1560 
       22.19        26.96        16.21        41.06        19.53        44.09 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1843 TCGA-24-1850 TCGA-24-2020 TCGA-24-2027 
       17.23        90.15         3.48         5.49       151.99       109.68 
TCGA-24-2033 TCGA-24-2254 TCGA-25-1312 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       18.48        57.07         1.02        51.06        37.02         1.02 
TCGA-25-1323 TCGA-25-1324 TCGA-25-1627 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 
       12.00        34.03         0.36         0.30        56.94        60.59 
TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-2393 TCGA-25-2400 TCGA-29-1691 
       35.54        14.93        24.99        38.04        42.02        47.18 
TCGA-29-1697 TCGA-29-1702 TCGA-29-1703 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 
       31.17        18.64        59.67        17.00        85.68        66.77 
TCGA-29-1783 TCGA-29-2414 TCGA-29-2425 TCGA-36-1571 TCGA-36-1575 TCGA-36-1577 
        7.20        86.17        65.00        22.85         8.55        25.74 
TCGA-57-1583 TCGA-57-1994 TCGA-59-2350 TCGA-59-2352 TCGA-59-2363 TCGA-61-1721 
       11.38        25.02        22.32         9.40         5.39        11.11 
TCGA-61-1733 TCGA-61-1738 TCGA-61-1741 TCGA-61-1743 TCGA-61-1900 TCGA-61-1917 
       31.76        35.80        33.67        43.69         5.79        43.43 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2088 TCGA-61-2098 TCGA-61-2102 TCGA-61-2110 
        1.97         5.52         4.77        65.49         6.48        44.52 
TCGA-61-2111 
      125.72 

subtype1 subtype2 subtype3 
    0.36     1.02     0.30 
subtype1 subtype2 subtype3 
  180.16   105.99   151.99 
subtype1 subtype2 subtype3 
  28.455   34.555   24.990 
[1] "0.4 - 180.2 (28.5)" "1.0 - 106.0 (34.6)" "0.3 - 152.0 (25.0)"
  [1] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [13] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
 [19] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [25] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
 [31] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [43] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [49] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [79] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [85] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
 [91] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[121] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[133] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[139] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[157] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[163] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[169] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[175] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[193] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[199] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[211] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[217] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[223] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[235] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[241] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[247] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[253] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[259] "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [13] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
 [19] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [25] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
 [31] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [43] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [49] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [79] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [85] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
 [91] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[121] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[133] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[139] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[157] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[163] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[169] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[175] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[193] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[199] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[211] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[217] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[223] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[235] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[241] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[247] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[253] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[259] "subtype1"
  [1] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype1"
 [13] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
 [19] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [25] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
 [31] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [43] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [49] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
 [55] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [73] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [79] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [85] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
 [91] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[103] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype2"
[115] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[121] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[133] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[139] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[157] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[163] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[169] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[175] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
[187] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[193] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[199] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[205] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[211] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[217] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[223] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[235] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[241] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[247] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[253] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[259] "subtype1"
D9V2, continuous
          vv
clus       OMENTUM OVARY
  subtype1       1   101
  subtype2       0    67
  subtype3       0    92
D9V3, multiclass
         clus
vv        subtype1 subtype2 subtype3
  OMENTUM        1        0        0
  OVARY        101       67       92
D9V4, continuous
[1] "Remove cluster labels:" "subtype2"               "subtype3"              
clus
subtype1 subtype2 subtype3 
      10        2        2 
 [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [7] "subtype1" "subtype1" "subtype1" "subtype1"
D9V5, binary
          cls
clus         0   1
  subtype1   1 101
  subtype2   0  67
  subtype3   1  91
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    1  101
  subtype2    0   67
  subtype3    1   91
     clus
vv    subtype1 subtype2 subtype3
  NO         1        0        1
  YES      101       67       91
          vv
clus       R0 R1
  subtype1  0  2
  subtype2  1  0
  subtype3  1  3
D9V6, multiclass
[1] "Remove cluster labels:" "subtype1"               "subtype2"              
clus
subtype1 subtype2 subtype3 
       2        1        4 
[1] "subtype3" "subtype3" "subtype3" "subtype3"

Clustering(10) Variable = MRNASEQ_CHIERARCHICAL
D10V1, survival
          sevent
clus2       0  1
  subtype1 41 69
  subtype2 52 58
  subtype3 19 20
subtype1 subtype2 subtype3 
     110      110       39 
subtype1 subtype2 subtype3 
      69       58       20 
$subtype1
TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1514 TCGA-09-0364 TCGA-09-0366 
       44.32        33.67        76.54        56.55        29.16        57.73 
TCGA-09-0369 TCGA-09-1666 TCGA-09-1669 TCGA-09-1670 TCGA-09-1673 TCGA-09-1674 
       35.54        57.57        30.48        17.98         3.02         8.55 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2054 TCGA-10-0928 TCGA-10-0936 TCGA-13-0730 
       35.15         4.50        20.91        18.48        35.80        17.79 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0899 TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 
        7.79         8.12        56.15        29.98        21.14        13.81 
TCGA-13-1506 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-23-1029 TCGA-23-1111 
        4.41        25.38        19.07        16.67         8.81         3.22 
TCGA-23-1114 TCGA-23-1123 TCGA-23-1809 TCGA-24-1103 TCGA-24-1413 TCGA-24-1416 
       68.68        33.47         0.53        54.08         6.31         6.38 
TCGA-24-1419 TCGA-24-1424 TCGA-24-1430 TCGA-24-1467 TCGA-24-1469 TCGA-24-1474 
        7.86         6.02        28.34       105.99         9.11        22.19 
TCGA-24-1544 TCGA-24-1548 TCGA-24-1550 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 
       26.96        16.21        41.06        88.50        70.62        39.88 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1567 TCGA-24-1603 TCGA-24-1616 TCGA-24-1844 
       19.53        44.09        17.23        90.15        38.24         3.72 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2027 TCGA-24-2036 TCGA-24-2038 TCGA-24-2297 
        4.87       151.99       109.68        64.01        44.48        55.86 
TCGA-25-1312 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1319 TCGA-25-1321 
        1.02        51.06        37.02         1.02        65.00        33.96 
TCGA-25-1323 TCGA-25-1324 TCGA-25-1627 TCGA-25-1630 TCGA-25-1632 TCGA-25-1634 
       12.00        34.03         0.36         7.86        56.94        35.54 
TCGA-25-1870 TCGA-25-1871 TCGA-25-2391 TCGA-25-2393 TCGA-25-2400 TCGA-29-1690 
       14.93        24.99        49.05        38.04        42.02        44.71 
TCGA-29-1691 TCGA-29-1696 TCGA-29-1697 TCGA-29-1702 TCGA-29-1703 TCGA-29-1761 
       47.18        33.70        31.17        18.64        59.67        17.00 
TCGA-29-1762 TCGA-29-1763 TCGA-36-1570 TCGA-36-1571 TCGA-36-1575 TCGA-36-1577 
       85.68        66.77        21.53        22.85         8.55        25.74 
TCGA-57-1583 TCGA-57-1993 TCGA-57-1994 TCGA-59-2350 TCGA-59-2352 TCGA-59-2363 
       11.38        25.05        25.02        22.32         9.40         5.39 
TCGA-61-1728 TCGA-61-1736 TCGA-61-1738 TCGA-61-1741 TCGA-61-1743 TCGA-61-1900 
       27.88        48.79        35.80        33.67        43.69         5.79 
TCGA-61-1995 TCGA-61-2012 TCGA-61-2088 TCGA-61-2092 TCGA-61-2098 TCGA-61-2102 
        1.97        30.64         4.77        51.72        65.49         6.48 
TCGA-61-2110 TCGA-61-2111 
       44.52       125.72 

$subtype2
TCGA-04-1348 TCGA-09-1667 TCGA-09-1668 TCGA-09-2044 TCGA-13-0890 TCGA-13-0893 
       48.76        61.87        55.36         6.12        67.99        43.36 
TCGA-13-0897 TCGA-13-0924 TCGA-13-1405 TCGA-13-1410 TCGA-13-1481 TCGA-13-1497 
       57.47         6.08         7.36         4.70        87.06        54.31 
TCGA-13-1498 TCGA-13-1505 TCGA-13-1507 TCGA-13-1511 TCGA-13-1512 TCGA-13-2060 
       37.61         4.21         4.77         3.88         3.09         8.58 
TCGA-20-1682 TCGA-20-1687 TCGA-23-1026 TCGA-23-1027 TCGA-23-1109 TCGA-23-1120 
       27.48         2.66        26.83        31.73        51.35         4.27 
TCGA-23-1122 TCGA-23-2081 TCGA-24-0975 TCGA-24-1417 TCGA-24-1418 TCGA-24-1427 
       39.09        77.00        21.80         7.82         7.99         4.80 
TCGA-24-1428 TCGA-24-1436 TCGA-24-1549 TCGA-24-1551 TCGA-24-1552 TCGA-24-1562 
       17.36         8.55        56.58        51.91        41.39        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1842 TCGA-24-1843 TCGA-24-1846 TCGA-24-1847 
       47.70        25.87         8.32         3.48         4.37        11.28 
TCGA-24-1850 TCGA-24-1924 TCGA-24-1930 TCGA-24-2024 TCGA-24-2026 TCGA-24-2033 
        5.49        30.21        81.11        58.16        34.82        18.48 
TCGA-24-2035 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2281 
       28.18         0.79         0.36        47.54        31.63        44.58 
TCGA-24-2288 TCGA-24-2290 TCGA-24-2298 TCGA-25-1314 TCGA-25-1326 TCGA-25-1329 
        0.82        36.23        53.26        31.99        31.04         2.96 
TCGA-25-1623 TCGA-25-1633 TCGA-25-1635 TCGA-25-2396 TCGA-25-2399 TCGA-25-2404 
       18.58        60.59        51.22         3.02        19.99        29.00 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1699 
       26.96        78.87       101.75        38.53         0.79         0.53 
TCGA-29-1701 TCGA-29-1705 TCGA-29-1710 TCGA-29-1711 TCGA-29-1770 TCGA-29-1776 
       16.90        18.25        29.23        34.62        24.36        11.84 
TCGA-29-1781 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 
        8.35         5.36        34.62        86.17        65.00        62.47 
TCGA-29-2428 TCGA-30-1718 TCGA-30-1855 TCGA-30-1860 TCGA-30-1862 TCGA-30-1891 
       45.11        51.91         2.47        44.91         6.08        30.05 
TCGA-31-1944 TCGA-31-1951 TCGA-31-1953 TCGA-31-1956 TCGA-36-1574 TCGA-36-1578 
       45.57        22.45         6.71        44.09        22.55        27.85 
TCGA-36-1580 TCGA-36-1581 TCGA-57-1582 TCGA-59-2348 TCGA-61-1724 TCGA-61-1725 
       24.23        24.69        24.03       180.16        20.94        31.40 
TCGA-61-1733 TCGA-61-1740 TCGA-61-1907 TCGA-61-1919 TCGA-61-2000 TCGA-61-2009 
       31.76         2.43        31.30        38.17        14.50        39.85 
TCGA-61-2094 TCGA-61-2113 
       71.74        22.22 

$subtype3
TCGA-09-0367 TCGA-09-1662 TCGA-09-2051 TCGA-09-2056 TCGA-13-0801 TCGA-13-1403 
       17.95        89.33        63.09        12.46         8.28        10.88 
TCGA-23-1023 TCGA-23-2077 TCGA-23-2084 TCGA-24-1423 TCGA-24-1553 TCGA-24-1604 
       40.54       115.89        49.84         6.25        58.09        88.34 
TCGA-24-2023 TCGA-24-2254 TCGA-25-1313 TCGA-25-1318 TCGA-25-1322 TCGA-25-1328 
       44.84        57.07        26.93        34.98         2.99        65.06 
TCGA-25-1625 TCGA-25-1631 TCGA-25-2392 TCGA-25-2397 TCGA-29-1778 TCGA-29-1783 
       18.02         0.30         1.02        12.00        14.93         7.20 
TCGA-36-1568 TCGA-57-1584 TCGA-59-2351 TCGA-59-2355 TCGA-61-1721 TCGA-61-1910 
       28.73        21.14       116.12         2.14        11.11        37.02 
TCGA-61-1914 TCGA-61-1917 TCGA-61-1918 TCGA-61-1998 TCGA-61-2008 TCGA-61-2016 
       56.58        43.43        15.75         5.52        30.61         1.18 
TCGA-61-2097 TCGA-61-2104 TCGA-61-2109 
       60.62        76.83        20.68 

subtype1 subtype2 subtype3 
    0.36     0.36     0.30 
subtype1 subtype2 subtype3 
  151.99   180.16   116.12 
subtype1 subtype2 subtype3 
  28.750   28.015   26.930 
[1] "0.4 - 152.0 (28.8)" "0.4 - 180.2 (28.0)" "0.3 - 116.1 (26.9)"
  [1] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
 [13] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [19] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [37] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [43] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [49] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
 [61] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [67] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [73] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [91] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[103] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[115] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[121] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[133] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[139] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[145] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[151] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[157] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[163] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[169] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[175] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[211] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[217] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[223] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[229] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[247] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[253] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[259] "subtype2"
  [1] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
 [13] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [19] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [37] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [43] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [49] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
 [61] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [67] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [73] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [91] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[103] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[115] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[121] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[133] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[139] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[145] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[151] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[157] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[163] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[169] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[175] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[211] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[217] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[223] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[229] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[247] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[253] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[259] "subtype2"
  [1] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
 [13] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [19] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [37] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [43] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [49] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [55] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
 [61] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [67] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
 [73] "subtype2" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
 [79] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [91] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[103] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
[115] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[121] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[133] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[139] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
[145] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
[151] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[157] "subtype1" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
[163] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[169] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[175] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[181] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[193] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[211] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[217] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[223] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[229] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[235] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[241] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[247] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[253] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[259] "subtype2"
D10V2, continuous
          vv
clus       OMENTUM OVARY
  subtype1       0   111
  subtype2       1   110
  subtype3       0    39
D10V3, multiclass
         clus
vv        subtype1 subtype2 subtype3
  OMENTUM        0        1        0
  OVARY        111      110       39
D10V4, continuous
[1] "Remove cluster labels:" "subtype3"              
clus
subtype1 subtype2 subtype3 
       3       10        1 
 [1] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [7] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[13] "subtype2"
D10V5, binary
          cls
clus         0   1
  subtype1   2 109
  subtype2   0 111
  subtype3   0  39
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    2  109
  subtype2    0  111
  subtype3    0   39
     clus
vv    subtype1 subtype2 subtype3
  NO         2        0        0
  YES      109      111       39
          vv
clus       R0 R1
  subtype1  2  0
  subtype2  0  5
  subtype3  0  0
D10V6, multiclass
[1] "Remove cluster labels:" "subtype1"              
clus
subtype1 subtype2 
       2        5 
[1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"

Clustering(11) Variable = MIRSEQ_CNMF
D11V1, survival
          sevent
clus2       0  1
  subtype1 46 78
  subtype2 86 98
  subtype3 66 76
subtype1 subtype2 subtype3 
     124      184      142 
subtype1 subtype2 subtype3 
      78       98       76 
$subtype1
TCGA-04-1331 TCGA-04-1332 TCGA-04-1346 TCGA-04-1349 TCGA-04-1530 TCGA-09-1662 
       40.24        41.00        65.49        21.57       119.08        89.33 
TCGA-09-2054 TCGA-13-0768 TCGA-13-0890 TCGA-13-0894 TCGA-13-0900 TCGA-13-0908 
       20.91         8.42        67.99        49.61        57.07        44.84 
TCGA-13-1405 TCGA-13-1408 TCGA-13-1411 TCGA-13-1477 TCGA-13-1481 TCGA-13-1485 
        7.36         5.92         4.21        54.61        87.06        20.68 
TCGA-13-1487 TCGA-13-1499 TCGA-13-1501 TCGA-13-1505 TCGA-13-2060 TCGA-23-1026 
       22.39        38.37        32.84         4.21         8.58        26.83 
TCGA-23-1121 TCGA-23-2078 TCGA-23-2081 TCGA-24-0968 TCGA-24-0970 TCGA-24-1418 
        6.38        87.48        77.00        19.63        11.64         7.99 
TCGA-24-1422 TCGA-24-1425 TCGA-24-1427 TCGA-24-1434 TCGA-24-1546 TCGA-24-1550 
        0.76         5.95         4.80        18.67        64.27        41.06 
TCGA-24-1556 TCGA-24-1563 TCGA-24-1842 TCGA-24-1843 TCGA-24-1846 TCGA-24-1849 
       70.62        47.70         8.32         3.48         4.37         5.75 
TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1928 TCGA-24-1930 TCGA-24-2020 
        5.49         9.80        22.65        11.05        81.11       151.99 
TCGA-24-2024 TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 TCGA-24-2260 TCGA-24-2261 
       58.16        14.43        18.48        28.18        36.16         0.79 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 
        0.36        47.54        31.63        70.45        44.58         0.82 
TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2298 TCGA-25-1316 TCGA-25-1320 
       67.36        36.23        16.64        53.26        37.02        36.95 
TCGA-25-1326 TCGA-25-1328 TCGA-25-1626 TCGA-25-1628 TCGA-25-1633 TCGA-25-1635 
       31.04        65.06        15.78        20.58        60.59        51.22 
TCGA-25-1877 TCGA-25-2042 TCGA-25-2396 TCGA-25-2398 TCGA-25-2399 TCGA-25-2401 
       18.05        13.02         3.02        45.01        19.99         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1695 TCGA-29-1698 TCGA-29-1702 
       29.00        30.97        26.96         0.79        68.28        18.64 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1710 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 
       59.67        18.25        29.23        62.93        39.09        31.23 
TCGA-29-1770 TCGA-29-2414 TCGA-29-2427 TCGA-30-1857 TCGA-30-1861 TCGA-30-1862 
       24.36        86.17        62.47         0.26        34.78         6.08 
TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 
        1.18        57.57        24.26        30.05        48.79        45.57 
TCGA-31-1946 TCGA-31-1951 TCGA-31-1953 TCGA-31-1956 TCGA-31-1959 TCGA-36-1574 
       30.18        22.45         6.71        44.09         2.17        22.55 
TCGA-36-1575 TCGA-36-1576 TCGA-57-1585 TCGA-59-2354 TCGA-61-1721 TCGA-61-1724 
        8.55        30.05         1.74        34.39        11.11        20.94 
TCGA-61-1733 TCGA-61-1919 TCGA-61-2002 TCGA-61-2003 TCGA-61-2009 TCGA-61-2101 
       31.76        38.17        17.98         3.98        39.85        55.50 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2111 TCGA-61-2113 
        6.48        76.83       125.72        22.22 

$subtype2
TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 
       49.15         2.01        18.51        63.06        48.76        63.98 
TCGA-04-1356 TCGA-04-1365 TCGA-04-1367 TCGA-04-1536 TCGA-04-1646 TCGA-04-1654 
       49.28        76.54        71.47        29.06        27.88        47.70 
TCGA-09-0366 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1673 
       57.73        41.59        57.57        61.87        55.36         3.02 
TCGA-09-1674 TCGA-10-0926 TCGA-10-0927 TCGA-13-0714 TCGA-13-0720 TCGA-13-0723 
        8.55        25.91        81.47         6.21        44.55        39.58 
TCGA-13-0724 TCGA-13-0751 TCGA-13-0757 TCGA-13-0760 TCGA-13-0766 TCGA-13-0797 
        2.73        55.17        11.18        11.54        21.40         8.71 
TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0805 TCGA-13-0883 
        7.79         8.28         8.19        43.82        35.28        68.91 
TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0891 
      107.18        91.40        74.27        66.64        61.81        69.01 
TCGA-13-0893 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0910 
       43.36        19.36        47.38        48.33        47.84        37.08 
TCGA-13-0911 TCGA-13-0916 TCGA-13-0919 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       27.68        21.14        14.89         6.41         6.08        10.88 
TCGA-13-1404 TCGA-13-1407 TCGA-13-1409 TCGA-13-1410 TCGA-13-1412 TCGA-13-1482 
        6.61         6.05         6.84         4.70         5.33        61.71 
TCGA-13-1483 TCGA-13-1484 TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 
       29.39        98.04        70.82        52.44        73.55        38.17 
TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1500 TCGA-13-1504 
       49.22         4.24        54.31        37.61        13.97        16.57 
TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 
        4.41         4.77         4.14         2.56         3.88         3.09 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 
       23.05        25.94        26.20        27.48        25.38        19.07 
TCGA-20-1687 TCGA-23-1021 TCGA-23-1023 TCGA-23-1027 TCGA-23-1028 TCGA-23-1030 
        2.66        47.54        40.54        31.73        49.41        29.10 
TCGA-23-1032 TCGA-23-1107 TCGA-23-1109 TCGA-23-1110 TCGA-23-1113 TCGA-23-1114 
        2.24         0.30        51.35        54.51        31.20        68.68 
TCGA-23-1118 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-2079 TCGA-24-0975 
       86.01        39.09        33.47        58.13        91.66        21.80 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1417 TCGA-24-1423 TCGA-24-1428 TCGA-24-1430 
       63.55        47.41         7.82         6.25        17.36        28.34 
TCGA-24-1431 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 TCGA-24-1469 
       19.17        43.53         8.55        72.92        45.14         9.11 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1548 
        3.42         1.18        22.19        26.96        57.37        16.21 
TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1558 TCGA-24-1562 
       51.91        41.39        58.09        88.50        19.53        45.50 
TCGA-24-1564 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1845 TCGA-24-1924 
       25.87        90.15        88.34        48.33         3.81        30.21 
TCGA-24-2026 TCGA-24-2030 TCGA-25-1312 TCGA-25-1314 TCGA-25-1318 TCGA-25-1319 
       34.82        53.95         1.02        31.99        34.98        65.00 
TCGA-25-1324 TCGA-25-1325 TCGA-25-1329 TCGA-25-1623 TCGA-25-1632 TCGA-25-2397 
       34.03        32.09         2.96        18.58        56.94        12.00 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1697 TCGA-29-1699 
       78.87        44.71        47.18       101.75        31.17         0.53 
TCGA-29-1701 TCGA-29-1707 TCGA-29-1711 TCGA-29-1769 TCGA-29-1776 TCGA-29-1777 
       16.90        41.95        34.62        22.98        11.84        12.30 
TCGA-29-1784 TCGA-29-1785 TCGA-29-2425 TCGA-29-2428 TCGA-30-1718 TCGA-30-1853 
        5.36        34.62        65.00        45.11        51.91        36.26 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1859 TCGA-30-1860 TCGA-30-1866 TCGA-36-1569 
        2.47        15.68        48.07        44.91        36.62        29.06 
TCGA-36-1578 TCGA-36-1581 TCGA-57-1582 TCGA-57-1583 TCGA-59-2348 TCGA-59-2350 
       27.85        24.69        24.03        11.38       180.16        22.32 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 TCGA-61-1907 TCGA-61-1910 
       35.80         2.43        33.67         1.41        31.30        37.02 
TCGA-61-1911 TCGA-61-1913 TCGA-61-2000 TCGA-61-2012 
       42.48        48.92        14.50        30.64 

$subtype3
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1514 TCGA-04-1517 TCGA-04-1525 
       32.52        44.32        33.67        56.55        19.99        38.37 
TCGA-04-1542 TCGA-04-1638 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       84.20        55.40        28.64        64.64        36.23        31.86 
TCGA-04-1655 TCGA-09-0364 TCGA-09-1661 TCGA-09-1669 TCGA-09-1670 TCGA-09-2044 
       45.34        29.16        38.43        30.48        17.98         6.12 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2056 
       35.15         4.50        71.11        63.09        39.75        12.46 
TCGA-10-0928 TCGA-10-0933 TCGA-10-0934 TCGA-13-0755 TCGA-13-0791 TCGA-13-0792 
       18.48        11.70         3.88         2.47        38.93        36.72 
TCGA-13-0800 TCGA-13-0888 TCGA-13-0906 TCGA-13-0912 TCGA-13-0913 TCGA-13-0920 
        8.12        70.39        44.94        34.06        29.98        13.81 
TCGA-13-0921 TCGA-13-1489 TCGA-20-1685 TCGA-20-1686 TCGA-23-1022 TCGA-23-1029 
        4.64        82.88        16.67         2.93        42.51         8.81 
TCGA-23-1111 TCGA-23-1119 TCGA-23-1120 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 
        3.22       129.96         4.27         0.53        24.95       115.89 
TCGA-23-2084 TCGA-24-0966 TCGA-24-0979 TCGA-24-0982 TCGA-24-1103 TCGA-24-1413 
       49.84         7.63        41.56        22.32        54.08         6.31 
TCGA-24-1416 TCGA-24-1419 TCGA-24-1424 TCGA-24-1426 TCGA-24-1464 TCGA-24-1467 
        6.38         7.86         6.02         5.36        12.46       105.99 
TCGA-24-1549 TCGA-24-1557 TCGA-24-1560 TCGA-24-1565 TCGA-24-1567 TCGA-24-1616 
       56.58        39.88        44.09        10.26        17.23        38.24 
TCGA-24-1844 TCGA-24-1847 TCGA-24-2019 TCGA-24-2023 TCGA-24-2027 TCGA-24-2036 
        3.72        11.28         4.87        44.84       109.68        64.01 
TCGA-24-2038 TCGA-24-2254 TCGA-24-2297 TCGA-25-1313 TCGA-25-1315 TCGA-25-1317 
       44.48        57.07        55.86        26.93        51.06         1.02 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1625 TCGA-25-1627 TCGA-25-1630 
       33.96         2.99        12.00        18.02         0.36         7.86 
TCGA-25-1631 TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 TCGA-25-2391 
        0.30        35.54        14.93        24.99        85.05        49.05 
TCGA-25-2392 TCGA-25-2393 TCGA-25-2400 TCGA-29-1694 TCGA-29-1696 TCGA-29-1761 
        1.02        38.04        42.02        38.53        33.70        17.00 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1771 TCGA-29-1774 TCGA-29-1778 TCGA-29-1781 
       85.68        66.77        22.52        17.29        14.93         8.35 
TCGA-29-1783 TCGA-30-1714 TCGA-36-1568 TCGA-36-1570 TCGA-36-1571 TCGA-36-1577 
        7.20        38.07        28.73        21.53        22.85        25.74 
TCGA-36-1580 TCGA-57-1584 TCGA-57-1586 TCGA-57-1993 TCGA-57-1994 TCGA-59-2351 
       24.23        21.14        22.32        25.05        25.02       116.12 
TCGA-59-2352 TCGA-59-2355 TCGA-59-2363 TCGA-61-1725 TCGA-61-1728 TCGA-61-1736 
        9.40         2.14         5.39        31.40        27.88        48.79 
TCGA-61-1737 TCGA-61-1743 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1906 
       44.84        43.69         8.42         5.79        11.41        34.13 
TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 
       56.58        67.73        43.43        15.75         1.97         5.52 
TCGA-61-2008 TCGA-61-2016 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 
       30.61         1.18         4.77        51.72        71.74        61.64 
TCGA-61-2097 TCGA-61-2098 TCGA-61-2109 TCGA-61-2110 
       60.62        65.49        20.68        44.52 

subtype1 subtype2 subtype3 
    0.26     0.30     0.30 
subtype1 subtype2 subtype3 
  151.99   180.16   129.96 
subtype1 subtype2 subtype3 
  28.590   32.040   28.685 
[1] "0.3 - 152.0 (28.6)" "0.3 - 180.2 (32.0)" "0.3 - 130.0 (28.7)"
  [1] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [19] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [61] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[115] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[151] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[163] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[175] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[193] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[217] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[235] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[241] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[247] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[295] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[301] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[331] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[337] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[343] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[355] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[373] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[379] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[385] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[391] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[403] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[409] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[415] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[427] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[433] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [19] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [61] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[115] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[151] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[163] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[175] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[193] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[217] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[235] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[241] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[247] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[295] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[301] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[331] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[337] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[343] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[355] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[373] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[379] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[385] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[391] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[403] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[409] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[415] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[427] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[433] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [19] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [61] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[115] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[151] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[163] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[175] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype3" "subtype3" "subtype2" "subtype1" "subtype3" "subtype1"
[193] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[217] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[235] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[241] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[247] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[295] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[301] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[325] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[331] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[337] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[343] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype2"
[355] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[373] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[379] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[385] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[391] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[403] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[409] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[415] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[427] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[433] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
D11V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       2   121                1
  subtype2       0   185                0
  subtype3       0   144                0
D11V3, multiclass
D11V4, continuous
D11V5, binary
          cls
clus         0   1
  subtype1   0 124
  subtype2   1 184
  subtype3   2 142
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    0  124
  subtype2    1  184
  subtype3    2  142
     clus
vv    subtype1 subtype2 subtype3
  NO         0        1        2
  YES      124      184      142
          vv
clus       R0 R1
  subtype1  0  3
  subtype2  0  3
  subtype3  2  0
D11V6, multiclass
[1] "Remove cluster labels:" "subtype3"              
clus
subtype1 subtype2 subtype3 
       3        3        2 
[1] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"

Clustering(12) Variable = MIRSEQ_CHIERARCHICAL
D12V1, survival
          sevent
clus2        0   1
  subtype1   3   2
  subtype2 123 163
  subtype3  72  87
subtype1 subtype2 subtype3 
       5      286      159 
subtype1 subtype2 subtype3 
       2      163       87 
$subtype1
TCGA-04-1346 TCGA-13-0883 TCGA-23-1120 TCGA-25-1313 TCGA-31-1944 
       65.49        68.91         4.27        26.93        45.57 

$subtype2
TCGA-04-1331 TCGA-04-1332 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 TCGA-04-1347 
       40.24        41.00        49.15         2.01        18.51        63.06 
TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 TCGA-04-1365 TCGA-04-1530 
       48.76        21.57        63.98        49.28        76.54       119.08 
TCGA-04-1536 TCGA-04-1646 TCGA-04-1654 TCGA-09-0366 TCGA-09-1662 TCGA-09-1665 
       29.06        27.88        47.70        57.73        89.33        41.59 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1673 TCGA-09-1674 TCGA-09-2054 
       57.57        61.87        55.36         3.02         8.55        20.91 
TCGA-10-0926 TCGA-10-0927 TCGA-13-0714 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 
       25.91        81.47         6.21        44.55        39.58         2.73 
TCGA-13-0751 TCGA-13-0757 TCGA-13-0760 TCGA-13-0766 TCGA-13-0768 TCGA-13-0797 
       55.17        11.18        11.54        21.40         8.42         8.71 
TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0805 TCGA-13-0884 
        7.79         8.28         8.19        43.82        35.28       107.18 
TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 
       91.40        74.27        66.64        61.81        67.99        69.01 
TCGA-13-0893 TCGA-13-0894 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       43.36        49.61        57.07        19.36        47.38        48.33 
TCGA-13-0905 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0916 TCGA-13-0919 
       47.84        44.84        37.08        27.68        21.14        14.89 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 
        6.41         6.08        10.88         6.61         7.36         6.05 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        5.92         6.84         4.70         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 
       87.06        61.71        29.39        98.04        20.68        22.39 
TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 
       70.82        52.44        73.55        38.17        49.22         4.24 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
       54.31        37.61        38.37        13.97        32.84        16.57 
TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
        4.21         4.41         4.77         4.14         2.56         3.88 
TCGA-13-1512 TCGA-13-2060 TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 TCGA-20-1683 
        3.09         8.58        25.94        26.20        27.48        25.38 
TCGA-20-1684 TCGA-20-1687 TCGA-23-1021 TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 
       19.07         2.66        47.54        40.54        26.83        31.73 
TCGA-23-1028 TCGA-23-1030 TCGA-23-1107 TCGA-23-1109 TCGA-23-1113 TCGA-23-1118 
       49.41        29.10         0.30        51.35        31.20        86.01 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1124 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 
        6.38        39.09        58.13        87.48        91.66        77.00 
TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-1104 TCGA-24-1105 TCGA-24-1417 
       19.63        11.64        21.80        63.55        47.41         7.82 
TCGA-24-1418 TCGA-24-1422 TCGA-24-1425 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 
        7.99         0.76         5.95         4.80        17.36        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 
       19.17        18.67        43.53         8.55        72.92        45.14 
TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1545 TCGA-24-1546 
        9.11         3.42         1.18        22.19        57.37        64.27 
TCGA-24-1548 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 TCGA-24-1556 
       16.21        41.06        51.91        41.39        88.50        70.62 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1603 TCGA-24-1614 TCGA-24-1842 
       45.50        47.70        25.87        90.15        48.33         8.32 
TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 
        3.48         3.81         4.37         5.75         5.49         9.80 
TCGA-24-1924 TCGA-24-1928 TCGA-24-1930 TCGA-24-2020 TCGA-24-2024 TCGA-24-2026 
       30.21        11.05        81.11       151.99        58.16        34.82 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2260 TCGA-24-2261 
       14.43        53.95        18.48        28.18        36.16         0.79 
TCGA-24-2262 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
        0.36        31.63        70.45        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2298 TCGA-25-1314 TCGA-25-1316 TCGA-25-1318 
       36.23        16.64        53.26        31.99        37.02        34.98 
TCGA-25-1319 TCGA-25-1320 TCGA-25-1324 TCGA-25-1325 TCGA-25-1326 TCGA-25-1328 
       65.00        36.95        34.03        32.09        31.04        65.06 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1626 TCGA-25-1628 TCGA-25-1632 TCGA-25-1635 
        2.96        18.58        15.78        20.58        56.94        51.22 
TCGA-25-1877 TCGA-25-2042 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 
       18.05        13.02         3.02        12.00        45.01        19.99 
TCGA-25-2401 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 
        2.96        30.97        26.96        78.87        44.71        47.18 
TCGA-29-1693 TCGA-29-1695 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 
      101.75         0.79        31.17        68.28         0.53        16.90 
TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 
       18.64        59.67        18.25        41.95        29.23        34.62 
TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1776 
       62.93        39.09        31.23        22.98        24.36        11.84 
TCGA-29-1777 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 
       12.30        34.62        86.17        65.00        62.47        45.11 
TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 
       51.91        36.26         2.47        15.68         0.26        48.07 
TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 
       44.91        34.78         6.08        36.62         1.18        57.57 
TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1946 TCGA-31-1951 TCGA-31-1953 
       24.26        30.05        48.79        30.18        22.45         6.71 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1569 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 
       44.09         2.17        29.06        22.55         8.55        30.05 
TCGA-36-1578 TCGA-36-1581 TCGA-57-1582 TCGA-57-1583 TCGA-57-1585 TCGA-59-2348 
       27.85        24.69        24.03        11.38         1.74       180.16 
TCGA-59-2350 TCGA-59-2354 TCGA-61-1724 TCGA-61-1733 TCGA-61-1738 TCGA-61-1740 
       22.32        34.39        20.94        31.76        35.80         2.43 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 
       33.67        43.69         1.41        31.30        37.02        42.48 
TCGA-61-1913 TCGA-61-1919 TCGA-61-2000 TCGA-61-2002 TCGA-61-2009 TCGA-61-2012 
       48.92        38.17        14.50        17.98        39.85        30.64 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2111 TCGA-61-2113 
       55.50         6.48       125.72        22.22 

$subtype3
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1367 TCGA-04-1514 TCGA-04-1517 
       32.52        44.32        33.67        71.47        56.55        19.99 
TCGA-04-1525 TCGA-04-1542 TCGA-04-1638 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 
       38.37        84.20        55.40        28.64        64.64        36.23 
TCGA-04-1652 TCGA-04-1655 TCGA-09-0364 TCGA-09-1661 TCGA-09-1669 TCGA-09-1670 
       31.86        45.34        29.16        38.43        30.48        17.98 
TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 
        6.12        35.15         4.50        71.11        63.09        39.75 
TCGA-09-2056 TCGA-10-0928 TCGA-10-0933 TCGA-10-0934 TCGA-13-0755 TCGA-13-0791 
       12.46        18.48        11.70         3.88         2.47        38.93 
TCGA-13-0792 TCGA-13-0800 TCGA-13-0888 TCGA-13-0906 TCGA-13-0912 TCGA-13-0913 
       36.72         8.12        70.39        44.94        34.06        29.98 
TCGA-13-0920 TCGA-13-0921 TCGA-13-1489 TCGA-20-0987 TCGA-20-1685 TCGA-20-1686 
       13.81         4.64        82.88        23.05        16.67         2.93 
TCGA-23-1022 TCGA-23-1029 TCGA-23-1032 TCGA-23-1110 TCGA-23-1111 TCGA-23-1114 
       42.51         8.81         2.24        54.51         3.22        68.68 
TCGA-23-1119 TCGA-23-1123 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2084 
      129.96        33.47         0.53        24.95       115.89        49.84 
TCGA-24-0966 TCGA-24-0979 TCGA-24-0982 TCGA-24-1103 TCGA-24-1413 TCGA-24-1416 
        7.63        41.56        22.32        54.08         6.31         6.38 
TCGA-24-1419 TCGA-24-1423 TCGA-24-1424 TCGA-24-1426 TCGA-24-1464 TCGA-24-1467 
        7.86         6.25         6.02         5.36        12.46       105.99 
TCGA-24-1544 TCGA-24-1549 TCGA-24-1553 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 
       26.96        56.58        58.09        39.88        19.53        44.09 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1604 TCGA-24-1616 TCGA-24-1844 TCGA-24-1847 
       10.26        17.23        88.34        38.24         3.72        11.28 
TCGA-24-1923 TCGA-24-2019 TCGA-24-2023 TCGA-24-2027 TCGA-24-2036 TCGA-24-2038 
       22.65         4.87        44.84       109.68        64.01        44.48 
TCGA-24-2254 TCGA-24-2267 TCGA-24-2297 TCGA-25-1312 TCGA-25-1315 TCGA-25-1317 
       57.07        47.54        55.86         1.02        51.06         1.02 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1625 TCGA-25-1627 TCGA-25-1630 
       33.96         2.99        12.00        18.02         0.36         7.86 
TCGA-25-1631 TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 
        0.30        60.59        35.54        14.93        24.99        85.05 
TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2400 TCGA-25-2404 TCGA-29-1694 
       49.05         1.02        38.04        42.02        29.00        38.53 
TCGA-29-1696 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1771 TCGA-29-1774 
       33.70        17.00        85.68        66.77        22.52        17.29 
TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-30-1714 TCGA-36-1568 
       14.93         8.35         7.20         5.36        38.07        28.73 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1577 TCGA-36-1580 TCGA-57-1584 TCGA-57-1586 
       21.53        22.85        25.74        24.23        21.14        22.32 
TCGA-57-1993 TCGA-57-1994 TCGA-59-2351 TCGA-59-2352 TCGA-59-2355 TCGA-59-2363 
       25.05        25.02       116.12         9.40         2.14         5.39 
TCGA-61-1721 TCGA-61-1725 TCGA-61-1728 TCGA-61-1736 TCGA-61-1737 TCGA-61-1899 
       11.11        31.40        27.88        48.79        44.84         8.42 
TCGA-61-1900 TCGA-61-1901 TCGA-61-1906 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 
        5.79        11.41        34.13        56.58        67.73        43.43 
TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 TCGA-61-2003 TCGA-61-2008 TCGA-61-2016 
       15.75         1.97         5.52         3.98        30.61         1.18 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2097 TCGA-61-2098 
        4.77        51.72        71.74        61.64        60.62        65.49 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 
       76.83        20.68        44.52 

subtype1 subtype2 subtype3 
    4.27     0.26     0.30 
subtype1 subtype2 subtype3 
   68.91   180.16   129.96 
subtype1 subtype2 subtype3 
  45.570   30.805   28.730 
[1] "4.3 - 68.9 (45.6)"  "0.3 - 180.2 (30.8)" "0.3 - 130.0 (28.7)"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
 [19] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [61] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[151] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[163] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[175] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[193] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[217] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[235] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[241] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[253] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[259] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[265] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[271] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[289] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[295] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[301] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[307] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[313] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[325] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[337] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[379] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[385] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[391] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[403] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[409] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[427] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[433] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[445] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
 [19] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [61] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[151] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[163] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[175] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[193] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[217] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[235] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[241] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[253] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[259] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[265] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[271] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[289] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[295] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[301] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[307] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[313] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[325] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[337] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[379] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[385] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[391] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[403] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[409] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[427] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[433] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[445] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
 [19] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [61] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [79] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[151] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[163] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[169] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[175] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[193] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[217] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[235] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[241] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[247] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[253] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[259] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[265] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[271] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[277] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[289] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[295] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[301] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[307] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[313] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[325] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[331] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[337] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[373] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[379] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[385] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[391] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[403] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[409] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[427] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[433] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[445] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
D12V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       0     5                0
  subtype2       2   284                1
  subtype3       0   161                0
D12V3, multiclass
D12V4, continuous
[1] "Remove cluster labels:" "subtype1"              
clus
subtype1 subtype2 subtype3 
       1       54        9 
 [1] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [7] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[13] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[19] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[25] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[31] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[37] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[43] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[49] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[55] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[61] "subtype2" "subtype2" "subtype2"
D12V5, binary
          cls
clus         0   1
  subtype1   0   5
  subtype2   1 286
  subtype3   2 159
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    0    5
  subtype2    1  286
  subtype3    2  159
     clus
vv    subtype1 subtype2 subtype3
  NO         0        1        2
  YES        5      286      159
          vv
clus       R0 R1
  subtype1  0  0
  subtype2  0  6
  subtype3  2  0
D12V6, multiclass
[1] "Remove cluster labels:" "subtype3"              
clus
subtype2 subtype3 
       6        2 
[1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"

Clustering(13) Variable = MIRSEQ_MATURE_CNMF
D13V1, survival
          sevent
clus2        0   1
  subtype1  29  69
  subtype2  97 100
  subtype3  72  83
subtype1 subtype2 subtype3 
      98      197      155 
subtype1 subtype2 subtype3 
      69      100       83 
$subtype1
TCGA-04-1331 TCGA-04-1346 TCGA-04-1349 TCGA-04-1530 TCGA-09-1662 TCGA-09-2054 
       40.24        65.49        21.57       119.08        89.33        20.91 
TCGA-13-0768 TCGA-13-0886 TCGA-13-0894 TCGA-13-0900 TCGA-13-1405 TCGA-13-1408 
        8.42        74.27        49.61        57.07         7.36         5.92 
TCGA-13-1411 TCGA-13-1477 TCGA-13-1481 TCGA-13-1485 TCGA-13-1487 TCGA-23-1026 
        4.21        54.61        87.06        20.68        22.39        26.83 
TCGA-24-0968 TCGA-24-0970 TCGA-24-1422 TCGA-24-1427 TCGA-24-1434 TCGA-24-1546 
       19.63        11.64         0.76         4.80        18.67        64.27 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1556 TCGA-24-1563 TCGA-24-1842 TCGA-24-1843 
       41.06        51.91        70.62        47.70         8.32         3.48 
TCGA-24-1849 TCGA-24-1850 TCGA-24-1928 TCGA-24-1930 TCGA-24-2020 TCGA-24-2024 
        5.75         5.49        11.05        81.11       151.99        58.16 
TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 
       14.43        18.48        28.18        36.16         0.79         0.36 
TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2289 TCGA-24-2293 TCGA-24-2298 
       31.63        70.45        44.58        67.36        16.64        53.26 
TCGA-25-1316 TCGA-25-1326 TCGA-25-1328 TCGA-25-1623 TCGA-25-1626 TCGA-25-1628 
       37.02        31.04        65.06        18.58        15.78        20.58 
TCGA-25-1635 TCGA-25-1877 TCGA-25-2042 TCGA-25-2396 TCGA-25-2398 TCGA-25-2399 
       51.22        18.05        13.02         3.02        45.01        19.99 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1698 TCGA-29-1702 
        2.96        29.00        30.97        26.96        68.28        18.64 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1710 TCGA-29-1766 TCGA-29-1768 TCGA-29-2427 
       59.67        18.25        29.23        39.09        31.23        62.47 
TCGA-30-1857 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1867 TCGA-30-1887 
        0.26        44.91        34.78         6.08         1.18        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 TCGA-31-1953 
       30.05        48.79        45.57        30.18        22.45         6.71 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1569 TCGA-36-1574 TCGA-57-1585 TCGA-59-2354 
       44.09         2.17        29.06        22.55         1.74        34.39 
TCGA-61-1721 TCGA-61-1919 TCGA-61-2002 TCGA-61-2009 TCGA-61-2101 TCGA-61-2102 
       11.11        38.17        17.98        39.85        55.50         6.48 
TCGA-61-2111 TCGA-61-2113 
      125.72        22.22 

$subtype2
TCGA-04-1332 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 TCGA-04-1347 TCGA-04-1348 
       41.00        49.15         2.01        18.51        63.06        48.76 
TCGA-04-1350 TCGA-04-1356 TCGA-04-1365 TCGA-04-1367 TCGA-04-1536 TCGA-04-1646 
       63.98        49.28        76.54        71.47        29.06        27.88 
TCGA-04-1654 TCGA-09-0366 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 
       47.70        57.73        41.59        57.57        61.87        55.36 
TCGA-09-1673 TCGA-09-1674 TCGA-10-0926 TCGA-10-0927 TCGA-13-0714 TCGA-13-0720 
        3.02         8.55        25.91        81.47         6.21        44.55 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0751 TCGA-13-0757 TCGA-13-0760 TCGA-13-0766 
       39.58         2.73        55.17        11.18        11.54        21.40 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0805 
        8.71         7.79         8.28         8.19        43.82        35.28 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 
       68.91       107.18        91.40        66.64        61.81        67.99 
TCGA-13-0891 TCGA-13-0893 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 
       69.01        43.36        19.36        47.38        48.33        47.84 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0916 TCGA-13-0919 TCGA-13-0923 
       44.84        37.08        27.68        21.14        14.89         6.41 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1407 TCGA-13-1409 TCGA-13-1410 
        6.08        10.88         6.61         6.05         6.84         4.70 
TCGA-13-1412 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1488 TCGA-13-1491 
        5.33        61.71        29.39        98.04        70.82        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
       73.55        38.17        49.22         4.24        54.31        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 
       38.37        13.97        32.84        16.57         4.21         4.41 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2060 
        4.77         4.14         2.56         3.88         3.09         8.58 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 
       23.05        25.94        26.20        27.48        25.38        19.07 
TCGA-20-1687 TCGA-23-1021 TCGA-23-1023 TCGA-23-1027 TCGA-23-1028 TCGA-23-1030 
        2.66        47.54        40.54        31.73        49.41        29.10 
TCGA-23-1107 TCGA-23-1109 TCGA-23-1113 TCGA-23-1114 TCGA-23-1118 TCGA-23-1122 
        0.30        51.35        31.20        68.68        86.01        39.09 
TCGA-23-1123 TCGA-23-1124 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-24-0975 
       33.47        58.13        87.48        91.66        77.00        21.80 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1417 TCGA-24-1418 TCGA-24-1425 TCGA-24-1428 
       63.55        47.41         7.82         7.99         5.95        17.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 
       28.34        19.17        43.53         8.55        72.92        45.14 
TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 
        9.11         3.42         1.18        22.19        26.96        57.37 
TCGA-24-1548 TCGA-24-1552 TCGA-24-1555 TCGA-24-1558 TCGA-24-1562 TCGA-24-1564 
       16.21        41.39        88.50        19.53        45.50        25.87 
TCGA-24-1603 TCGA-24-1614 TCGA-24-1845 TCGA-24-1846 TCGA-24-1920 TCGA-24-1924 
       90.15        48.33         3.81         4.37         9.80        30.21 
TCGA-24-2026 TCGA-24-2030 TCGA-24-2288 TCGA-24-2290 TCGA-25-1312 TCGA-25-1314 
       34.82        53.95         0.82        36.23         1.02        31.99 
TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1324 TCGA-25-1325 TCGA-25-1329 
       34.98        65.00        36.95        34.03        32.09         2.96 
TCGA-25-2397 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1695 
       12.00        78.87        44.71        47.18       101.75         0.79 
TCGA-29-1697 TCGA-29-1699 TCGA-29-1701 TCGA-29-1707 TCGA-29-1711 TCGA-29-1764 
       31.17         0.53        16.90        41.95        34.62        62.93 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1776 TCGA-29-1777 TCGA-29-1784 TCGA-29-1785 
       22.98        24.36        11.84        12.30         5.36        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2428 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 
       86.17        65.00        45.11        51.91        36.26         2.47 
TCGA-30-1856 TCGA-30-1859 TCGA-30-1866 TCGA-30-1880 TCGA-36-1575 TCGA-36-1576 
       15.68        48.07        36.62        57.57         8.55        30.05 
TCGA-36-1578 TCGA-36-1581 TCGA-57-1582 TCGA-57-1583 TCGA-59-2348 TCGA-59-2350 
       27.85        24.69        24.03        11.38       180.16        22.32 
TCGA-61-1724 TCGA-61-1733 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1907 
       20.94        31.76        35.80         2.43        33.67        31.30 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-2000 TCGA-61-2088 
       37.02        42.48        48.92        14.50         4.77 

$subtype3
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1514 TCGA-04-1517 TCGA-04-1525 
       32.52        44.32        33.67        56.55        19.99        38.37 
TCGA-04-1542 TCGA-04-1638 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       84.20        55.40        28.64        64.64        36.23        31.86 
TCGA-04-1655 TCGA-09-0364 TCGA-09-1661 TCGA-09-1669 TCGA-09-1670 TCGA-09-2044 
       45.34        29.16        38.43        30.48        17.98         6.12 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2056 
       35.15         4.50        71.11        63.09        39.75        12.46 
TCGA-10-0928 TCGA-10-0933 TCGA-10-0934 TCGA-13-0755 TCGA-13-0791 TCGA-13-0792 
       18.48        11.70         3.88         2.47        38.93        36.72 
TCGA-13-0800 TCGA-13-0888 TCGA-13-0906 TCGA-13-0912 TCGA-13-0913 TCGA-13-0920 
        8.12        70.39        44.94        34.06        29.98        13.81 
TCGA-13-0921 TCGA-13-1489 TCGA-20-1685 TCGA-20-1686 TCGA-23-1022 TCGA-23-1029 
        4.64        82.88        16.67         2.93        42.51         8.81 
TCGA-23-1032 TCGA-23-1110 TCGA-23-1111 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 
        2.24        54.51         3.22       129.96         4.27         6.38 
TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2084 TCGA-24-0966 TCGA-24-0979 
        0.53        24.95       115.89        49.84         7.63        41.56 
TCGA-24-0982 TCGA-24-1103 TCGA-24-1413 TCGA-24-1416 TCGA-24-1419 TCGA-24-1423 
       22.32        54.08         6.31         6.38         7.86         6.25 
TCGA-24-1424 TCGA-24-1426 TCGA-24-1464 TCGA-24-1467 TCGA-24-1549 TCGA-24-1553 
        6.02         5.36        12.46       105.99        56.58        58.09 
TCGA-24-1557 TCGA-24-1560 TCGA-24-1565 TCGA-24-1567 TCGA-24-1604 TCGA-24-1616 
       39.88        44.09        10.26        17.23        88.34        38.24 
TCGA-24-1844 TCGA-24-1847 TCGA-24-1923 TCGA-24-2019 TCGA-24-2023 TCGA-24-2027 
        3.72        11.28        22.65         4.87        44.84       109.68 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2267 TCGA-24-2297 TCGA-25-1313 
       64.01        44.48        57.07        47.54        55.86        26.93 
TCGA-25-1315 TCGA-25-1317 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1625 
       51.06         1.02        33.96         2.99        12.00        18.02 
TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
        0.36         7.86         0.30        56.94        60.59        35.54 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 
       14.93        24.99        85.05        49.05         1.02        38.04 
TCGA-25-2400 TCGA-29-1694 TCGA-29-1696 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 
       42.02        38.53        33.70        17.00        85.68        66.77 
TCGA-29-1771 TCGA-29-1774 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-30-1714 
       22.52        17.29        14.93         8.35         7.20        38.07 
TCGA-36-1568 TCGA-36-1570 TCGA-36-1571 TCGA-36-1577 TCGA-36-1580 TCGA-57-1584 
       28.73        21.53        22.85        25.74        24.23        21.14 
TCGA-57-1586 TCGA-57-1993 TCGA-57-1994 TCGA-59-2351 TCGA-59-2352 TCGA-59-2355 
       22.32        25.05        25.02       116.12         9.40         2.14 
TCGA-59-2363 TCGA-61-1725 TCGA-61-1728 TCGA-61-1736 TCGA-61-1737 TCGA-61-1743 
        5.39        31.40        27.88        48.79        44.84        43.69 
TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1906 TCGA-61-1914 
        1.41         8.42         5.79        11.41        34.13        56.58 
TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 TCGA-61-2003 
       67.73        43.43        15.75         1.97         5.52         3.98 
TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 
       30.61        30.64         1.18        51.72        71.74        61.64 
TCGA-61-2097 TCGA-61-2098 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 
       60.62        65.49        76.83        20.68        44.52 

subtype1 subtype2 subtype3 
    0.26     0.30     0.30 
subtype1 subtype2 subtype3 
  151.99   180.16   129.96 
subtype1 subtype2 subtype3 
   28.59    31.76    29.16 
[1] "0.3 - 152.0 (28.6)" "0.3 - 180.2 (31.8)" "0.3 - 130.0 (29.2)"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [19] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [61] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
 [79] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[115] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[151] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[163] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[175] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[193] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[235] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[241] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[247] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[265] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[295] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[325] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[331] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[337] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[379] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[385] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[391] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[403] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[409] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[415] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[427] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[433] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [19] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [61] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
 [79] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[115] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[151] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[163] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[175] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[193] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[235] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[241] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[247] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[265] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[295] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[325] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[331] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[337] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[379] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[385] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[391] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[403] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[409] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[415] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[427] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[433] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [19] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
 [25] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
 [31] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
 [37] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [49] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [55] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [61] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
 [79] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [97] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[103] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[109] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[115] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[151] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[157] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype2"
[163] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[169] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[175] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[181] "subtype2" "subtype3" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[193] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[205] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[211] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[223] "subtype3" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[235] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[241] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[247] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[265] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[271] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[289] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
[295] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[301] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[307] "subtype3" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[313] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[325] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[331] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[337] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[349] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[367] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[373] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[379] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype2"
[385] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[391] "subtype2" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[397] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[403] "subtype3" "subtype1" "subtype2" "subtype3" "subtype3" "subtype2"
[409] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[415] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[421] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[427] "subtype3" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
[433] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[439] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
D13V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       1    96                1
  subtype2       1   197                0
  subtype3       0   157                0
D13V3, multiclass
D13V4, continuous
D13V5, binary
          cls
clus         0   1
  subtype1   0  98
  subtype2   0 198
  subtype3   3 154
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    0   98
  subtype2    0  198
  subtype3    3  154
     clus
vv    subtype1 subtype2 subtype3
  NO         0        0        3
  YES       98      198      154
          vv
clus       R0 R1
  subtype1  0  2
  subtype2  0  4
  subtype3  2  0
D13V6, multiclass
[1] "Remove cluster labels:" "subtype1"               "subtype3"              
clus
subtype1 subtype2 subtype3 
       2        4        2 
[1] "subtype2" "subtype2" "subtype2" "subtype2"

Clustering(14) Variable = MIRSEQ_MATURE_CHIERARCHICAL
D14V1, survival
          sevent
clus2        0   1
  subtype1  70  86
  subtype2   4   5
  subtype3 124 161
subtype1 subtype2 subtype3 
     156        9      285 
subtype1 subtype2 subtype3 
      86        5      161 
$subtype1
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1514 TCGA-04-1517 TCGA-04-1525 
       32.52        44.32        33.67        56.55        19.99        38.37 
TCGA-04-1542 TCGA-04-1638 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       84.20        55.40        28.64        64.64        36.23        31.86 
TCGA-04-1655 TCGA-09-0364 TCGA-09-1661 TCGA-09-1669 TCGA-09-1670 TCGA-09-2044 
       45.34        29.16        38.43        30.48        17.98         6.12 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2051 TCGA-09-2053 TCGA-09-2056 TCGA-10-0928 
       35.15         4.50        63.09        39.75        12.46        18.48 
TCGA-10-0933 TCGA-10-0934 TCGA-13-0755 TCGA-13-0791 TCGA-13-0792 TCGA-13-0800 
       11.70         3.88         2.47        38.93        36.72         8.12 
TCGA-13-0883 TCGA-13-0888 TCGA-13-0906 TCGA-13-0912 TCGA-13-0913 TCGA-13-0920 
       68.91        70.39        44.94        34.06        29.98        13.81 
TCGA-13-0921 TCGA-13-1489 TCGA-20-0987 TCGA-20-1685 TCGA-20-1686 TCGA-23-1021 
        4.64        82.88        23.05        16.67         2.93        47.54 
TCGA-23-1022 TCGA-23-1029 TCGA-23-1032 TCGA-23-1111 TCGA-23-1119 TCGA-23-1120 
       42.51         8.81         2.24         3.22       129.96         4.27 
TCGA-23-1123 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2084 TCGA-24-0966 
       33.47         0.53        24.95       115.89        49.84         7.63 
TCGA-24-0979 TCGA-24-0982 TCGA-24-1103 TCGA-24-1413 TCGA-24-1416 TCGA-24-1419 
       41.56        22.32        54.08         6.31         6.38         7.86 
TCGA-24-1423 TCGA-24-1424 TCGA-24-1426 TCGA-24-1464 TCGA-24-1467 TCGA-24-1549 
        6.25         6.02         5.36        12.46       105.99        56.58 
TCGA-24-1553 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1565 TCGA-24-1567 
       58.09        39.88        19.53        44.09        10.26        17.23 
TCGA-24-1604 TCGA-24-1616 TCGA-24-1844 TCGA-24-1847 TCGA-24-1923 TCGA-24-2019 
       88.34        38.24         3.72        11.28        22.65         4.87 
TCGA-24-2023 TCGA-24-2027 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2267 
       44.84       109.68        64.01        44.48        57.07        47.54 
TCGA-24-2297 TCGA-25-1313 TCGA-25-1315 TCGA-25-1317 TCGA-25-1321 TCGA-25-1322 
       55.86        26.93        51.06         1.02        33.96         2.99 
TCGA-25-1323 TCGA-25-1625 TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 TCGA-25-1634 
       12.00        18.02         0.36         7.86         0.30        35.54 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 
       14.93        24.99        85.05        49.05         1.02        38.04 
TCGA-25-2400 TCGA-25-2404 TCGA-29-1694 TCGA-29-1696 TCGA-29-1761 TCGA-29-1762 
       42.02        29.00        38.53        33.70        17.00        85.68 
TCGA-29-1763 TCGA-29-1771 TCGA-29-1774 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 
       66.77        22.52        17.29        14.93         8.35         7.20 
TCGA-29-1784 TCGA-30-1714 TCGA-31-1944 TCGA-36-1568 TCGA-36-1570 TCGA-36-1571 
        5.36        38.07        45.57        28.73        21.53        22.85 
TCGA-36-1577 TCGA-36-1580 TCGA-57-1584 TCGA-57-1586 TCGA-57-1993 TCGA-57-1994 
       25.74        24.23        21.14        22.32        25.05        25.02 
TCGA-59-2351 TCGA-59-2352 TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 TCGA-61-1725 
      116.12         9.40         2.14         5.39        11.11        31.40 
TCGA-61-1728 TCGA-61-1736 TCGA-61-1737 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 
       27.88        48.79        44.84         8.42         5.79        11.41 
TCGA-61-1906 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 
       34.13        56.58        67.73        43.43        15.75         1.97 
TCGA-61-1998 TCGA-61-2003 TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 TCGA-61-2092 
        5.52         3.98        30.61        30.64         1.18        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2097 TCGA-61-2098 TCGA-61-2109 TCGA-61-2110 
       71.74        61.64        60.62        65.49        20.68        44.52 

$subtype2
TCGA-04-1367 TCGA-09-2050 TCGA-23-1110 TCGA-23-1114 TCGA-24-1544 TCGA-25-1312 
       71.47        71.11        54.51        68.68        26.96         1.02 
TCGA-61-1741 TCGA-61-1743 TCGA-61-2104 
       33.67        43.69        76.83 

$subtype3
TCGA-04-1331 TCGA-04-1332 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 TCGA-04-1346 
       40.24        41.00        49.15         2.01        18.51        65.49 
TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 TCGA-04-1365 
       63.06        48.76        21.57        63.98        49.28        76.54 
TCGA-04-1530 TCGA-04-1536 TCGA-04-1646 TCGA-04-1654 TCGA-09-0366 TCGA-09-1662 
      119.08        29.06        27.88        47.70        57.73        89.33 
TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1673 TCGA-09-1674 
       41.59        57.57        61.87        55.36         3.02         8.55 
TCGA-09-2054 TCGA-10-0926 TCGA-10-0927 TCGA-13-0714 TCGA-13-0720 TCGA-13-0723 
       20.91        25.91        81.47         6.21        44.55        39.58 
TCGA-13-0724 TCGA-13-0751 TCGA-13-0757 TCGA-13-0760 TCGA-13-0766 TCGA-13-0768 
        2.73        55.17        11.18        11.54        21.40         8.42 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0805 
        8.71         7.79         8.28         8.19        43.82        35.28 
TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 
      107.18        91.40        74.27        66.64        61.81        67.99 
TCGA-13-0891 TCGA-13-0893 TCGA-13-0894 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 
       69.01        43.36        49.61        57.07        19.36        47.38 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0916 
       48.33        47.84        44.84        37.08        27.68        21.14 
TCGA-13-0919 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
       14.89         6.41         6.08        10.88         6.61         7.36 
TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 
        6.05         5.92         6.84         4.70         4.21         5.33 
TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 
       54.61        87.06        61.71        29.39        98.04        20.68 
TCGA-13-1487 TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 
       22.39        70.82        52.44        73.55        38.17        49.22 
TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 
        4.24        54.31        37.61        38.37        13.97        32.84 
TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 
       16.57         4.21         4.41         4.77         4.14         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2060 TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 
        3.88         3.09         8.58        25.94        26.20        27.48 
TCGA-20-1683 TCGA-20-1684 TCGA-20-1687 TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 
       25.38        19.07         2.66        40.54        26.83        31.73 
TCGA-23-1028 TCGA-23-1030 TCGA-23-1107 TCGA-23-1109 TCGA-23-1113 TCGA-23-1118 
       49.41        29.10         0.30        51.35        31.20        86.01 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1124 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 
        6.38        39.09        58.13        87.48        91.66        77.00 
TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-1104 TCGA-24-1105 TCGA-24-1417 
       19.63        11.64        21.80        63.55        47.41         7.82 
TCGA-24-1418 TCGA-24-1422 TCGA-24-1425 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 
        7.99         0.76         5.95         4.80        17.36        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 
       19.17        18.67        43.53         8.55        72.92        45.14 
TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1545 TCGA-24-1546 
        9.11         3.42         1.18        22.19        57.37        64.27 
TCGA-24-1548 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 TCGA-24-1556 
       16.21        41.06        51.91        41.39        88.50        70.62 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1603 TCGA-24-1614 TCGA-24-1842 
       45.50        47.70        25.87        90.15        48.33         8.32 
TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 
        3.48         3.81         4.37         5.75         5.49         9.80 
TCGA-24-1924 TCGA-24-1928 TCGA-24-1930 TCGA-24-2020 TCGA-24-2024 TCGA-24-2026 
       30.21        11.05        81.11       151.99        58.16        34.82 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2260 TCGA-24-2261 
       14.43        53.95        18.48        28.18        36.16         0.79 
TCGA-24-2262 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
        0.36        31.63        70.45        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2298 TCGA-25-1314 TCGA-25-1316 TCGA-25-1318 
       36.23        16.64        53.26        31.99        37.02        34.98 
TCGA-25-1319 TCGA-25-1320 TCGA-25-1324 TCGA-25-1325 TCGA-25-1326 TCGA-25-1328 
       65.00        36.95        34.03        32.09        31.04        65.06 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1626 TCGA-25-1628 TCGA-25-1632 TCGA-25-1633 
        2.96        18.58        15.78        20.58        56.94        60.59 
TCGA-25-1635 TCGA-25-1877 TCGA-25-2042 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 
       51.22        18.05        13.02         3.02        12.00        45.01 
TCGA-25-2399 TCGA-25-2401 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 
       19.99         2.96        30.97        26.96        78.87        44.71 
TCGA-29-1691 TCGA-29-1693 TCGA-29-1695 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
       47.18       101.75         0.79        31.17        68.28         0.53 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
       16.90        18.64        59.67        18.25        41.95        29.23 
TCGA-29-1711 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 
       34.62        62.93        39.09        31.23        22.98        24.36 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 
       11.84        12.30        34.62        86.17        65.00        62.47 
TCGA-29-2428 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 
       45.11        51.91        36.26         2.47        15.68         0.26 
TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 
       48.07        44.91        34.78         6.08        36.62         1.18 
TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1946 TCGA-31-1951 
       57.57        24.26        30.05        48.79        30.18        22.45 
TCGA-31-1953 TCGA-31-1956 TCGA-31-1959 TCGA-36-1569 TCGA-36-1574 TCGA-36-1575 
        6.71        44.09         2.17        29.06        22.55         8.55 
TCGA-36-1576 TCGA-36-1578 TCGA-36-1581 TCGA-57-1582 TCGA-57-1583 TCGA-57-1585 
       30.05        27.85        24.69        24.03        11.38         1.74 
TCGA-59-2348 TCGA-59-2350 TCGA-59-2354 TCGA-61-1724 TCGA-61-1733 TCGA-61-1738 
      180.16        22.32        34.39        20.94        31.76        35.80 
TCGA-61-1740 TCGA-61-1895 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
        2.43         1.41        31.30        37.02        42.48        48.92 
TCGA-61-1919 TCGA-61-2000 TCGA-61-2002 TCGA-61-2009 TCGA-61-2088 TCGA-61-2101 
       38.17        14.50        17.98        39.85         4.77        55.50 
TCGA-61-2102 TCGA-61-2111 TCGA-61-2113 
        6.48       125.72        22.22 

subtype1 subtype2 subtype3 
    0.30     1.02     0.26 
subtype1 subtype2 subtype3 
  129.96    76.83   180.16 
subtype1 subtype2 subtype3 
  28.685   54.510   30.210 
[1] "0.3 - 130.0 (28.7)" "1.0 - 76.8 (54.5)"  "0.3 - 180.2 (30.2)"
  [1] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [19] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
 [31] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [37] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
 [43] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [49] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
 [55] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [61] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
 [67] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
 [73] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [97] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[103] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[109] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[157] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[163] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[169] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[175] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[181] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[187] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[193] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[205] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[217] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[223] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[229] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[235] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[241] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[247] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[259] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[271] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[277] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[289] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[295] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[301] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[307] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[313] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[319] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[325] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[337] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[343] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[355] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[361] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[367] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[373] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[379] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[385] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[391] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[397] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[403] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[409] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[415] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[421] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[427] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[433] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[445] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
  [1] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [19] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
 [31] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [37] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
 [43] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [49] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
 [55] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [61] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
 [67] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
 [73] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [97] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[103] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[109] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[157] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[163] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[169] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[175] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[181] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[187] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[193] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[205] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[217] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[223] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[229] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[235] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[241] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[247] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[259] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[271] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[277] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[289] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[295] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[301] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[307] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[313] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[319] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[325] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[337] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[343] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[355] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[361] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[367] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[373] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[379] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[385] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[391] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[397] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[403] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[409] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[415] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[421] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[427] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[433] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[445] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
  [1] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
 [13] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [19] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
 [31] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [37] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
 [43] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [49] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
 [55] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [61] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
 [67] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
 [73] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [97] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[103] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[109] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[115] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[121] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[133] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[139] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[145] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[157] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[163] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[169] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[175] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[181] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[187] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[193] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[205] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[211] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[217] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[223] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[229] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[235] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
[241] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[247] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[253] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[259] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[265] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[271] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[277] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[283] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[289] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[295] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[301] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[307] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[313] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[319] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[325] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[337] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[343] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[355] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[361] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[367] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[373] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[379] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[385] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[391] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[397] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[403] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[409] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
[415] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[421] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[427] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[433] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
[439] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[445] "subtype3" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
D14V2, continuous
          vv
clus       OMENTUM OVARY PERITONEUM OVARY
  subtype1       0   158                0
  subtype2       0     9                0
  subtype3       2   283                1
D14V3, multiclass
D14V4, continuous
[1] "Remove cluster labels:" "subtype2"              
clus
subtype1 subtype2 subtype3 
       8        1       55 
 [1] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [7] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[13] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[19] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[25] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[31] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[37] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[43] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[49] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[55] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[61] "subtype3" "subtype3" "subtype3"
D14V5, binary
          cls
clus         0   1
  subtype1   3 155
  subtype2   0   9
  subtype3   0 286
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    3  155
  subtype2    0    9
  subtype3    0  286
     clus
vv    subtype1 subtype2 subtype3
  NO         3        0        0
  YES      155        9      286
          vv
clus       R0 R1
  subtype1  2  0
  subtype2  0  0
  subtype3  0  6
D14V6, multiclass
[1] "Remove cluster labels:" "subtype1"              
clus
subtype1 subtype3 
       2        6 
[1] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
> q(save="no")
