name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-A4-7286-01A-11D-2136-08	46	44	2	33	4.347826e-02	0	coding only	34834024	11	31	3.157832e-07	8.899345e-07
TCGA-A4-7287-01A-11D-2136-08	52	51	1	39	1.923077e-02	0	coding only	34834024	12	38	3.444908e-07	1.090887e-06
TCGA-A4-7288-01A-11D-2136-08	79	79	0	63	0	0	coding only	34834024	15	61	4.306135e-07	1.751161e-06
TCGA-A4-7583-01A-11D-2136-08	68	67	1	53	1.470588e-02	0	coding only	34834024	14	52	4.019059e-07	1.492793e-06
TCGA-A4-7584-01A-11D-2136-08	83	82	1	64	1.204819e-02	0	coding only	34834024	16	63	4.593210e-07	1.808577e-06
TCGA-A4-7585-01A-11D-2136-08	95	94	1	78	1.052632e-02	0	coding only	34834024	14	76	4.019059e-07	2.181775e-06
TCGA-A4-7732-01A-11D-2136-08	70	68	2	59	2.857143e-02	0	coding only	34834024	8	53	2.296605e-07	1.521501e-06
TCGA-A4-7734-01A-11D-2136-08	58	58	0	47	0	0	coding only	34834024	11	46	3.157832e-07	1.320548e-06
TCGA-A4-7828-01A-11D-2136-08	39	38	1	32	2.564103e-02	0	coding only	34834024	6	30	1.722454e-07	8.612269e-07
TCGA-A4-7915-01A-11D-2201-08	34	34	0	28	0	0	coding only	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-A4-7996-01A-11D-2201-08	103	100	3	76	2.912621e-02	0	coding only	34834024	23	74	6.602740e-07	2.124360e-06
TCGA-A4-7997-01A-11D-2201-08	83	81	2	62	2.409639e-02	0	coding only	34834024	19	61	5.454437e-07	1.751161e-06
TCGA-A4-8098-01A-11D-2396-08	108	106	2	84	1.851852e-02	0	coding only	34834024	20	79	5.741513e-07	2.267898e-06
TCGA-A4-8310-01A-11D-2396-08	89	86	3	66	3.370787e-02	0	coding only	34834024	20	62	5.741513e-07	1.779869e-06
TCGA-A4-8311-01A-11D-2396-08	66	63	3	40	4.545455e-02	0	coding only	34834024	21	40	6.028589e-07	1.148303e-06
TCGA-A4-8312-01A-11D-2396-08	18	18	0	13	0	0	coding only	34834024	5	12	1.435378e-07	3.444908e-07
TCGA-A4-8516-01A-11D-2396-08	117	115	2	89	1.709402e-02	0	coding only	34834024	26	87	7.463967e-07	2.497558e-06
TCGA-A4-8518-01A-11D-2396-08	19	17	2	12	1.052632e-01	0	coding only	34834024	5	10	1.435378e-07	2.870756e-07
TCGA-A4-8630-01A-11D-2396-08	64	61	3	49	4.687500e-02	0	coding only	34834024	11	46	3.157832e-07	1.320548e-06
TCGA-AL-3466-01A-01D-1252-08	49	47	2	38	4.081633e-02	0	coding only	34834024	6	34	1.722454e-07	9.760572e-07
TCGA-AL-3467-01A-01D-1252-08	32	32	0	26	0	0	coding only	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-AL-3468-01A-01D-1252-08	121	120	1	92	8.264463e-03	0	coding only	34834024	25	88	7.176891e-07	2.526266e-06
TCGA-AL-3472-01A-01D-1252-08	63	61	2	49	3.174603e-02	0	coding only	34834024	11	49	3.157832e-07	1.406671e-06
TCGA-AL-3473-01A-01D-1252-08	74	71	3	60	4.054054e-02	0	coding only	34834024	11	58	3.157832e-07	1.665039e-06
TCGA-AL-7173-01A-11D-2136-08	71	70	1	57	1.408451e-02	0	coding only	34834024	11	55	3.157832e-07	1.578916e-06
TCGA-B1-5398-01A-02D-1589-08	130	129	1	94	7.692308e-03	0	coding only	34834024	33	93	9.473496e-07	2.669804e-06
TCGA-B3-3925-01A-01D-1252-08	95	93	2	70	2.105263e-02	0	coding only	34834024	21	67	6.028589e-07	1.923407e-06
TCGA-B3-3925-01A-01D-1458-08	90	84	6	65	6.666667e-02	0	coding only	34834024	19	59	5.454437e-07	1.693746e-06
TCGA-B3-3926-01A-01D-1252-08	17	16	1	15	5.882353e-02	0	coding only	34834024	1	15	2.870756e-08	4.306135e-07
TCGA-B3-4103-01A-01D-1252-08	77	75	2	58	2.597403e-02	0	coding only	34834024	16	58	4.593210e-07	1.665039e-06
TCGA-B3-4103-01A-01D-1458-08	75	73	2	56	2.666667e-02	0	coding only	34834024	17	56	4.880286e-07	1.607624e-06
TCGA-B3-4104-01A-01D-1252-08	126	123	3	94	2.380952e-02	0	coding only	34834024	29	93	8.325194e-07	2.669804e-06
TCGA-B3-4104-01A-01D-1458-08	122	119	3	91	2.459016e-02	0	coding only	34834024	28	91	8.038118e-07	2.612388e-06
TCGA-B3-8121-01A-21D-2396-08	43	40	3	31	6.976744e-02	0	coding only	34834024	8	30	2.296605e-07	8.612269e-07
TCGA-B9-4113-01A-01D-1252-08	79	79	0	61	0	0	coding only	34834024	18	60	5.167362e-07	1.722454e-06
TCGA-B9-4114-01A-01D-1252-08	93	91	2	71	2.150538e-02	0	coding only	34834024	20	70	5.741513e-07	2.009530e-06
TCGA-B9-4115-01A-01D-1252-08	75	73	2	51	2.666667e-02	0	coding only	34834024	20	48	5.741513e-07	1.377963e-06
TCGA-B9-4116-01A-01D-1252-08	103	102	1	80	9.708738e-03	0	coding only	34834024	21	79	6.028589e-07	2.267898e-06
TCGA-B9-4117-01A-01D-1252-08	55	54	1	43	1.818182e-02	0	coding only	34834024	10	42	2.870756e-07	1.205718e-06
TCGA-B9-4617-01A-01D-1252-08	60	56	4	47	6.666667e-02	0	coding only	34834024	7	46	2.009530e-07	1.320548e-06
TCGA-B9-5155-01A-01D-1589-08	135	133	2	100	1.481481e-02	0	coding only	34834024	30	94	8.612269e-07	2.698511e-06
TCGA-B9-5156-01A-01D-1589-08	107	106	1	80	9.345794e-03	0	coding only	34834024	24	76	6.889816e-07	2.181775e-06
TCGA-B9-7268-01A-11D-2136-08	64	59	5	40	7.812500e-02	0	coding only	34834024	18	37	5.167362e-07	1.062180e-06
TCGA-BQ-5875-01A-11D-1589-08	84	82	2	64	2.380952e-02	0	coding only	34834024	18	63	5.167362e-07	1.808577e-06
TCGA-BQ-5876-01A-11D-1589-08	97	94	3	77	3.092784e-02	0	coding only	34834024	16	72	4.593210e-07	2.066945e-06
TCGA-BQ-5877-01A-11D-1589-08	86	84	2	71	2.325581e-02	0	coding only	34834024	13	68	3.731983e-07	1.952114e-06
TCGA-BQ-5878-01A-11D-1589-08	123	121	2	88	1.626016e-02	0	coding only	34834024	30	84	8.612269e-07	2.411435e-06
TCGA-BQ-5879-01A-11D-1589-08	34	33	1	24	2.941176e-02	0	coding only	34834024	9	23	2.583681e-07	6.602740e-07
TCGA-BQ-5880-01A-11D-1589-08	63	62	1	51	1.587302e-02	0	coding only	34834024	10	50	2.870756e-07	1.435378e-06
TCGA-BQ-5881-01A-11D-1589-08	47	47	0	39	0	0	coding only	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-BQ-5882-01A-11D-1589-08	78	74	4	56	5.128205e-02	0	coding only	34834024	18	55	5.167362e-07	1.578916e-06
TCGA-BQ-5883-01A-11D-1589-08	38	36	2	26	5.263158e-02	0	coding only	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-BQ-5884-01A-11D-1589-08	58	58	0	47	0	0	coding only	34834024	11	45	3.157832e-07	1.291840e-06
TCGA-BQ-5885-01A-11D-1589-08	123	123	0	100	0	0	coding only	34834024	23	96	6.602740e-07	2.755926e-06
TCGA-BQ-5886-01A-11D-1589-08	71	71	0	58	0	0	coding only	34834024	12	58	3.444908e-07	1.665039e-06
TCGA-BQ-5887-01A-11D-1961-08	29	25	4	18	1.379310e-01	0	coding only	34834024	7	16	2.009530e-07	4.593210e-07
TCGA-BQ-5888-01A-11D-1589-08	26	25	1	17	3.846154e-02	0	coding only	34834024	7	17	2.009530e-07	4.880286e-07
TCGA-BQ-5889-01A-11D-1589-08	62	61	1	50	1.612903e-02	0	coding only	34834024	11	49	3.157832e-07	1.406671e-06
TCGA-BQ-5890-01A-11D-1589-08	95	94	1	73	1.052632e-02	0	coding only	34834024	20	71	5.741513e-07	2.038237e-06
TCGA-BQ-5891-01A-11D-1589-08	40	40	0	26	0	0	coding only	34834024	14	24	4.019059e-07	6.889816e-07
TCGA-BQ-5892-01A-11D-1589-08	86	84	2	71	2.325581e-02	0	coding only	34834024	11	65	3.157832e-07	1.865992e-06
TCGA-BQ-5893-01A-11D-1589-08	58	56	2	40	3.448276e-02	0	coding only	34834024	15	37	4.306135e-07	1.062180e-06
TCGA-BQ-5894-01A-11D-1589-08	37	37	0	32	0	0	coding only	34834024	5	31	1.435378e-07	8.899345e-07
TCGA-BQ-7044-01A-11D-1961-08	89	88	1	69	1.123596e-02	0	coding only	34834024	19	65	5.454437e-07	1.865992e-06
TCGA-BQ-7045-01A-31D-1961-08	92	90	2	67	2.173913e-02	0	coding only	34834024	21	67	6.028589e-07	1.923407e-06
TCGA-BQ-7046-01A-11D-1961-08	51	48	3	38	5.882353e-02	0	coding only	34834024	10	36	2.870756e-07	1.033472e-06
TCGA-BQ-7048-01A-11D-1961-08	86	86	0	66	0	0	coding only	34834024	20	65	5.741513e-07	1.865992e-06
TCGA-BQ-7049-01A-11D-1961-08	26	26	0	19	0	0	coding only	34834024	7	19	2.009530e-07	5.454437e-07
TCGA-BQ-7050-01A-11D-1961-08	24	24	0	20	0	0	coding only	34834024	4	20	1.148303e-07	5.741513e-07
TCGA-BQ-7051-01A-12D-1961-08	108	105	3	76	2.777778e-02	0	coding only	34834024	28	73	8.038118e-07	2.095652e-06
TCGA-BQ-7053-01A-11D-1961-08	66	63	3	51	4.545455e-02	0	coding only	34834024	12	47	3.444908e-07	1.349256e-06
TCGA-BQ-7055-01A-11D-1961-08	14	11	3	8	2.142857e-01	0	coding only	34834024	3	8	8.612269e-08	2.296605e-07
TCGA-BQ-7056-01A-11D-1961-08	43	41	2	31	4.651163e-02	0	coding only	34834024	9	30	2.583681e-07	8.612269e-07
TCGA-BQ-7058-01A-11D-1961-08	86	85	1	71	1.162791e-02	0	coding only	34834024	13	68	3.731983e-07	1.952114e-06
TCGA-BQ-7059-01A-11D-1961-08	82	81	1	60	1.219512e-02	0	coding only	34834024	21	59	6.028589e-07	1.693746e-06
TCGA-BQ-7060-01A-11D-1961-08	41	40	1	31	2.439024e-02	0	coding only	34834024	9	29	2.583681e-07	8.325194e-07
TCGA-BQ-7061-01A-11D-1961-08	94	92	2	73	2.127660e-02	0	coding only	34834024	19	72	5.454437e-07	2.066945e-06
TCGA-BQ-7062-01A-11D-1961-08	46	42	4	34	8.695652e-02	0	coding only	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-DW-5560-01A-01D-1589-08	32	32	0	23	0	0	coding only	34834024	9	20	2.583681e-07	5.741513e-07
TCGA-DW-5561-01A-01D-1589-08	48	48	0	37	0	0	coding only	34834024	11	34	3.157832e-07	9.760572e-07
TCGA-DW-7834-01A-11D-2136-08	70	70	0	52	0	0	coding only	34834024	18	50	5.167362e-07	1.435378e-06
TCGA-DW-7837-01A-11D-2136-08	34	34	0	26	0	0	coding only	34834024	7	24	2.009530e-07	6.889816e-07
TCGA-DW-7838-01A-11D-2136-08	101	101	0	77	0	0	coding only	34834024	23	73	6.602740e-07	2.095652e-06
TCGA-DW-7839-01A-11D-2136-08	50	48	2	43	4.000000e-02	0	coding only	34834024	4	41	1.148303e-07	1.177010e-06
TCGA-DW-7840-01A-11D-2136-08	102	99	3	78	2.941176e-02	0	coding only	34834024	20	74	5.741513e-07	2.124360e-06
TCGA-DW-7841-01A-11D-2136-08	61	60	1	47	1.639344e-02	0	coding only	34834024	12	44	3.444908e-07	1.263133e-06
TCGA-DW-7842-01A-11D-2136-08	30	30	0	26	0	0	coding only	34834024	4	25	1.148303e-07	7.176891e-07
TCGA-DZ-6131-01A-11D-1961-08	34	33	1	22	2.941176e-02	0	coding only	34834024	11	22	3.157832e-07	6.315664e-07
TCGA-DZ-6132-01A-11D-1961-08	129	128	1	111	7.751938e-03	0	coding only	34834024	17	108	4.880286e-07	3.100417e-06
TCGA-DZ-6133-01A-11D-1961-08	116	115	1	90	8.620690e-03	0	coding only	34834024	24	86	6.889816e-07	2.468851e-06
TCGA-DZ-6134-01A-11D-1961-08	57	55	2	40	3.508772e-02	0	coding only	34834024	11	39	3.157832e-07	1.119595e-06
TCGA-DZ-6135-01A-11D-1961-08	42	38	4	27	9.523810e-02	0	coding only	34834024	11	24	3.157832e-07	6.889816e-07
TCGA-EV-5901-01A-11D-1589-08	50	49	1	39	2.000000e-02	0	coding only	34834024	9	37	2.583681e-07	1.062180e-06
TCGA-EV-5902-01A-11D-1589-08	99	99	0	80	0	0	coding only	34834024	19	74	5.454437e-07	2.124360e-06
TCGA-EV-5903-01A-11D-1589-08	127	125	2	99	1.574803e-02	0	coding only	34834024	22	91	6.315664e-07	2.612388e-06
TCGA-G7-6789-01A-11D-1961-08	29	28	1	20	3.448276e-02	0	coding only	34834024	8	18	2.296605e-07	5.167362e-07
TCGA-G7-6790-01A-11D-1961-08	78	77	1	59	1.282051e-02	0	coding only	34834024	17	58	4.880286e-07	1.665039e-06
TCGA-G7-6792-01A-21D-1961-08	43	42	1	29	2.325581e-02	0	coding only	34834024	12	28	3.444908e-07	8.038118e-07
TCGA-G7-6793-01A-11D-1961-08	39	39	0	31	0	0	coding only	34834024	8	27	2.296605e-07	7.751042e-07
TCGA-G7-6795-01A-11D-1961-08	74	74	0	54	0	0	coding only	34834024	20	51	5.741513e-07	1.464086e-06
TCGA-G7-6796-01A-11D-1961-08	60	58	2	44	3.333333e-02	0	coding only	34834024	14	42	4.019059e-07	1.205718e-06
TCGA-G7-6797-01A-11D-1961-08	73	69	4	54	5.479452e-02	0	coding only	34834024	15	52	4.306135e-07	1.492793e-06
TCGA-G7-7501-01A-11D-2201-08	48	46	2	36	4.166667e-02	0	coding only	34834024	8	34	2.296605e-07	9.760572e-07
TCGA-G7-7502-01A-11D-2201-08	79	78	1	58	1.265823e-02	0	coding only	34834024	20	57	5.741513e-07	1.636331e-06
TCGA-GL-6846-01A-11D-1961-08	78	78	0	59	0	0	coding only	34834024	18	58	5.167362e-07	1.665039e-06
TCGA-GL-7773-01A-11D-2136-08	137	136	1	107	7.299270e-03	0	coding only	34834024	28	102	8.038118e-07	2.928172e-06
TCGA-GL-7966-01A-11D-2201-08	53	49	4	33	7.547170e-02	0	coding only	34834024	16	31	4.593210e-07	8.899345e-07
TCGA-GL-8500-01A-11D-2396-08	100	95	5	75	5.000000e-02	1	exome+100bp flanks	34834024	19	70	5.454437e-07	2.009530e-06
TCGA-HE-7128-01A-11D-1961-08	44	43	1	36	2.272727e-02	0	coding only	34834024	6	34	1.722454e-07	9.760572e-07
TCGA-HE-7129-01A-11D-1961-08	62	61	1	42	1.612903e-02	0	coding only	34834024	16	40	4.593210e-07	1.148303e-06
TCGA-HE-7130-01A-11D-1961-08	218	215	3	172	1.376147e-02	0	coding only	34834024	42	166	1.205718e-06	4.765456e-06
TCGA-IZ-8195-01A-31D-2396-08	83	80	3	59	3.614458e-02	0	coding only	34834024	21	55	6.028589e-07	1.578916e-06
TCGA-IZ-8196-01A-11D-2396-08	112	107	5	83	4.464286e-02	1	exome+100bp flanks	34834024	22	77	6.315664e-07	2.210482e-06
TCGA-J7-6720-01A-11D-2136-08	45	41	4	32	8.888889e-02	0	coding only	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-J7-8537-01A-11D-2396-08	55	53	2	44	3.636364e-02	0	coding only	34834024	8	41	2.296605e-07	1.177010e-06